Pregenerated sensors for ZNF33A (Homo sapiens)
Ensembl gene IDs: ENSG00000189180Ensembl transcript IDs: ENST00000307441.13, ENST00000374618.7, ENST00000432900.7, ENST00000458705.6, ENST00000469037.2, ENST00000476504.5, ENST00000478556.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCTATCTTGTGTGAGCTTTGAGAGAATGCGTCTTGCAAGGAATTaGTCCATTTTAGCTAAGTTATCAAATTTATGGACAGAGTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: GLSCVSFERMRLARN*SILAKLSNLWTELS Trigger: GGACAACTCTGTCCATAAATTTGATAACTTAGCTAAAATGGACCAATTCCTTGCAAGACGCATTCTCTCAAAGCTCACACAAGATAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR GCA 90 bp | TTTTATCATCTACCTGAGGACTGTATCCTGCAATCCTGCTGTAATTaGTTATTAATGTCAGCAGGGTTTTTGTTATTTAGAATTCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: FYHLPEDCILQSCCN*LLMSAGFLLFRILY Trigger: GTAGAGAATTCTAAATAACAAAAACCCTGCTGACATTAATAAGCAATTACAGCAGGATTGCAGGATACAGTCCTCAGGTAGATGATAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGCTCAGTGCAACTCTTTaGAGTAGAAATGTCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGLSATL*SRNVSL Trigger: TAAAGAGACATTTCTACTTCAAAGAGTTGCACTGAG...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCTCAGCCTCCCAAAGTaGAGTGCTGGGATTACAGGC | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPLSLPK*SAGITG Trigger: GCCTGTAATCCCAGCACTTCACTTTGGGAGGCTGAG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTCTGCCTCAGCCTCCTaGGTAGCTTCGACTACACAC | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPSASAS*VASTTH Trigger: GTGTGTAGTCGAAGCTACTCAGGAGGCTGAGGCAGA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTCAAAAACACATCAGTaGACCCAGCTGGTCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPSKTHQ*TQLVLA Trigger: TGCCAGGACCAGCTGGGTTCACTGATGTGTTTTTGA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCGAGGTCTATCTTGTGTaGGCTTTGAGAGAATGCGTC | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPEVYLV*ALRECV Trigger: GACGCATTCTCTCAAAGCTCACACAAGATAGACCTC...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCCTCCCAAAGTGAAGTaGTGGGATTACAGGCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPPPKVK*WDYRHE Trigger: TTCATGCCTGTAATCCCAGCACTTCACTTTGGGAGG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCATCAGTGAACCCAGCTaGTCCTGGCACTTTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPISEPS*SWHFVL Trigger: CAAAACAAAGTGCCAGGACCAGCTGGGTTCACTGAT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCGACTACCACTTATGCTaGAGGCTGGAATGTTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPDYHLC*RLECSH Trigger: ATGTGAACATTCCAGCCTTCAGCATAAGTGGTAGTC...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCATCTTGTGTGAGCTTTaGGAGAATGCGTCTTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPILCEL*ENASCK Trigger: CTTGCAAGACGCATTCTCTCAAAGCTCACACAAGAT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCACTGGCCTCACAAAATaGGTTGGGAAGTGTTATCTC | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPTGLTK*VGKCYL Trigger: GAGATAACACTTCCCAACTCATTTTGTGAGGCCAGT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTGGTGTGGTGTTCCTTaGCATGTTCCTGATCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPWCGVP*HVPDLS Trigger: ACTAAGATCAGGAACATGGCAAGGAACACCACACCA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCAATGCTGAAAAGCAGTaGTGTGGTGTTCCTTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPNAEKQ*CGVPCH Trigger: ATGGCAAGGAACACCACACCACTGCTTTTCAGCATT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCACTGGTCCTTTCACTaGCTCAATAGTTTTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPHWSFH*LNSFAS Trigger: AGAGGCAAAACTATTGAGCCAGTGAAAGGACCAGTG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR CAA 90 bp | GGTTTACTCTGTGTTTTCCGTTCACTGTTTTCCATTCTCTGCGTTTaGACAAATTACAGTACCCTAGAGAGTACTTTCACTGCCTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GLLCVFRSLFSILCV*TNYSTLESTFTALK Trigger: TTTTAAGGCAGTGAAAGTACTCTCTAGGGTACTGTAATTTGTCAAAACGCAGAGAATGGAAAACAGTGAACGGAAAACACAGAGTAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCACTGTACCTGGCCTTaGAAGGTTATTAATTACTGC | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPHCTWP*KVINYC Trigger: GCAGTAATTAATAACCTTCCAAGGCCAGGTACAGTG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCAAGCCTTGCATTCCTaGTTTGCTAATATTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPQALHS*FANILR Trigger: CCTCAAAATATTAGCAAATCAGGAATGCAAGGCTTG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCTGAATATCAAATGTTaGACAAGCCTTGCATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPLNIKC*TSLAFL Trigger: CAGGAATGCAAGGCTTGTTCAACATTTGATATTCAG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCACACACACACAGAGTaGATGCAAACCATAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPHTHTE*MQTIVK Trigger: TTTTACTATGGTTTGCATGCACTCTGTGTGTGTGTG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCAATCCTGCTGTAATTaGTTATTAATGTCAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPQSCCN*LLMSAG Trigger: CCCTGCTGACATTAATAAGCAATTACAGCAGGATTG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCATGAACCACTGTACCTaGCCTTGGAAGGTTATTAAT | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPMNHCT*PWKVIN Trigger: ATTAATAACCTTCCAAGGCCAGGTACAGTGGTTCAT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCCTCACAAAATGAGTTaGGAAGTGTTATCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPPHKMS*EVLSLL Trigger: AAGCAGAGATAACACTTCCCAACTCATTTTGTGAGG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR CAA 90 bp | TATCAAATTTATGGACAGAGTTGTCCATGTTTCTTTCTAATCCTTTaGGTGACCATAGGATTAGCTGTGATGGCCTCTTTCATTTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: YQIYGQSCPCFFLIL*VTIGLAVMASFIFG Trigger: ACCAAAAATGAAAGAGGCCATCACAGCTAATCCTATGGTCACCAAAAGGATTAGAAAGAAACATGGACAACTCTGTCCATAAATTTGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCATCGTATTTCATCTTTaGGCTGCTAATGCATGCAAT | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPIVFHL*AANACN Trigger: ATTGCATGCATTAGCAGCTCAAAGATGAAATACGAT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTGTTCTTTACCAACTTaGGTAAGTTCTCCTGTATTC | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPCSLPT*VSSPVF Trigger: GAATACAGGAGAACTTACTCAAGTTGGTAAAGAACA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCAGAGAGTACTTTCACTaGCTTAAAAATCACCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPREYFH*LKNHLS Trigger: AGAGAGGTGATTTTTAAGGCAGTGAAAGTACTCTCT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTTGGTGAAGTGTACATaGGAATTCTCTCTACTCATT | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPLVKCT*EFSLLI Trigger: AATGAGTAGAGAGAATTCCCATGTACACTTCACCAA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCCGTCTTGCAAGGAATTaGTCCATTTTAGCTAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPRLARN*SILAKL Trigger: TAACTTAGCTAAAATGGACCAATTCCTTGCAAGACG...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCATGTTGAACAAGCCTTaGATTCCTGATTTGCTAATA | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPMLNKP*IPDLLI Trigger: TATTAGCAAATCAGGAATGCAAGGCTTGTTCAACAT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTGTATCCTGCAATCCTaGTGTAATTGCTTATTAATG | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPCILQS*CNCLLM Trigger: CATTAATAAGCAATTACAGCAGGATTGCAGGATACA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTCTAGTTTCCTAAAGTaGAAGCTTAGATTACTTGTG | + |
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Preference number: 2 (lower is better) Translates to: GYRKLSKKYREFSYNPFPSSFLK*KLRLLV Trigger: CACAAGTAATCTAAGCTTCCACTTTAGGAAACTAGA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR CCA 72 bp | GCCATCCCTCCTTTCCCCTCAACTCTCAGCAACCACTaGTCCTTTCACTGGCTCAATAGTTTTGCCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: AIPPFPSTLSNH*SFHWLNSFASP Trigger: GGGAGAGGCAAAACTATTGAGCCAGTGAAAGGACCAGTGGTTGCTGAGAGTTGAGGGGAAAGGAGGGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR TCA 72 bp | TTAACACTGCATTATATAGCACTTCCAGTACAATGCTaGAAAGCAGTGGTGTGGTGTTCCTTGCCATGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LTLHYIALPVQC*KAVVWCSLPCS Trigger: GGAACATGGCAAGGAACACCACACCACTGCTTTTCAGCATTGTACTGGAAGTGCTATATAATGCAGTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR GCA 72 bp | TTTGACAAATTACAGTACCCTAGAGAGTACTTTCACTaGCTTAAAAATCACCTCTCTACCTGCCATCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FDKLQYPREYFH*LKNHLSTCHPS Trigger: GGAGGGATGGCAGGTAGAGAGGTGATTTTTAAGGCAGTGAAAGTACTCTCTAGGGTACTGTAATTTGTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCGCCTCACAAAATGAGTaGGGAAGTGTTATCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GYRKLSKKYREFSYNPFPASQNE*GSVISA Trigger: AGCAGAGATAACACTTCCCAACTCATTTTGTGAGGC...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR TCA 72 bp | TACATATGCCTATTGAGGTCTATCTTGTGTGAGCTTTaGGAGAATGCGTCTTGCAAGGAATTGGTCCATTTT | + |
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Preference number: 3 (lower is better) Translates to: YICLLRSILCEL*ENASCKELVHF Trigger: AAAATGGACCAATTCCTTGCAAGACGCATTCTCTCAAAGCTCACACAAGATAGACCTCAATAGGCATATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR GCA 72 bp | CTACCTGAGGACTGTATCCTGCAATCCTGCTGTAATTaGTTATTAATGTCAGCAGGGTTTTTGTTATTTAGA | + |
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Preference number: 3 (lower is better) Translates to: LPEDCILQSCCN*LLMSAGFLLFR Trigger: TCTAAATAACAAAAACCCTGCTGACATTAATAAGCAATTACAGCAGGATTGCAGGATACAGTCCTCAGGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR GCA 72 bp | TTTTATCATCTACCTGAGGACTGTATCCTGCAATCCTaGTGTAATTGCTTATTAATGTCAGCAGGGTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: FYHLPEDCILQS*CNCLLMSAGFL Trigger: CAAAAACCCTGCTGACATTAATAAGCAATTACAGCAGGATTGCAGGATACAGTCCTCAGGTAGATGATAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCGGGTCTCCTTTTAAATaGTTTCAGGACATCACAAAC | + |
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Preference number: 3 (lower is better) Translates to: GYRKLSKKYREFSYNPFPGSPFK*FQDITN Trigger: GTTTGTGATGTCCTGAAACAATTTAAAAGGAGACCC...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTCCATTCTCTGCGTTTaGACAAATTACAGTACCCTA | + |
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Preference number: 3 (lower is better) Translates to: GYRKLSKKYREFSYNPFPSILCV*TNYSTL Trigger: TAGGGTACTGTAATTTGTCAAAACGCAGAGAATGGA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR CCA 72 bp | TACATTATCCTTAGAGGAAGTTTGGTGAAGTGTACATaGGAATTCTCTCTACTCATTAAACTTCTTGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: YIILRGSLVKCT*EFSLLIKLLVR Trigger: CCTCACAAGAAGTTTAATGAGTAGAGAGAATTCCCATGTACACTTCACCAAACTTCCTCTAAGGATAATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCGGAAGCTTAGATTACTaGTGTAATCTAGGATCACTA | + |
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Preference number: 3 (lower is better) Translates to: GYRKLSKKYREFSYNPFPGSLDY*CNLGSL Trigger: TAGTGATCCTAGATTACACAAGTAATCTAAGCTTCC...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTTCAAGGAACCAGTTTaGGGTTTTATCGATTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: GYRKLSKKYREFSYNPFPFKEPV*GFIDFL Trigger: GAGAAAATCGATAAAACCCAAAACTGGTTCCTTGAA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR TCA 72 bp | GTTGATGGTTACTCAAATGTAAAAGTCGTAAAAGTTTaGTATAACCACACACACACACATACACGTACACAC | + |
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Preference number: 3 (lower is better) Translates to: VDGYSNVKVVKV*YNHTHTHTRTH Trigger: GTGTGTACGTGTATGTGTGTGTGTGTGGTTATATCAAACTTTTACGACTTTTACATTTGAGTAACCATCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR TCA 72 bp | ACTGCTTTGGTTTATTTAATAGATACATATGCCTATTaGGGTCTATCTTGTGTGAGCTTTGAGAGAATGCGT | + |
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Preference number: 3 (lower is better) Translates to: TALVYLIDTYAY*GLSCVSFERMR Trigger: ACGCATTCTCTCAAAGCTCACACAAGATAGACCTCAATAGGCATATGTATCTATTAAATAAACCAAAGCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| CDS-3UTR GCA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGACTCCCTCGTCGGGTTaGATTCGCCATAGAAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGTPSSG*IRHRKA Trigger: CGCTTTTCTATGGCGAATGCAACCCGACGAGGGAGT...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGTTTAATCCAAGGGCATaGGCATCTCAGGGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGFNPRA*ASQGHP Trigger: TGGATGCCCCTGAGATGCTCATGCCCTTGGATTAAA...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGTGGCCAAAGCCTTTGTaGGACCTAAAGAGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGWPKPL*DLKSER Trigger: CCTCTCACTCTTTAGGTCTCACAAAGGCTTTGGCCA...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| CDS-3UTR CCA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGAGCTGTCCAGACTTCTaGAAAGCTTTGGCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGSCPDF*KALAWE Trigger: TTCCCAAGCCAAAGCTTTCCAGAAGTCTGGACAGCT...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGAACACAATACCCCACTaGGACAAGGTTGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGNTIPH*DKVAVV Trigger: AACTACAGCAACCTTGTCTCAGTGGGGTATTGTGTT...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGGTATTGCATCTGGAATaGATGAACTCTGAGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGVLHLE*MNSEVY Trigger: ATATACCTCAGAGTTCATTCATTCCAGATGCAATAC...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| CDS-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCACTCCCTCGTCGGGTTaGATTCGCCATAGAAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GYRKLSKKYREFSYNPFPTPSSG*IRHRKA Trigger: CGCTTTTCTATGGCGAATGCAACCCGACGAGGGAGT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR CAA 72 bp | TATGGACAGAGTTGTCCATGTTTCTTTCTAATCCTTTaGGTGACCATAGGATTAGCTGTGATGGCCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YGQSCPCFFLIL*VTIGLAVMASF Trigger: GAAAGAGGCCATCACAGCTAATCCTATGGTCACCAAAAGGATTAGAAAGAAACATGGACAACTCTGTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| CDS-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTCTGTTCTACCTCTGTaGAGTACAGCGGAGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GYRKLSKKYREFSYNPFPSVLPL*STAEKT Trigger: TGTCTTCTCCGCTGTACTCCACAGAGGTAGAACAGA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307441.13 |
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| CDS-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCAGCTGTCCAGACTTCTaGAAAGCTTTGGCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GYRKLSKKYREFSYNPFPSCPDF*KALAWE Trigger: TTCCCAAGCCAAAGCTTTCCAGAAGTCTGGACAGCT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 |
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| CDS-3UTR CCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCATCAGCTGTCCAGACTaGAAAGCTTTGGCTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GYRKLSKKYREFSYNPFPISCPD*KALAWE Trigger: TTCCCAAGCCAAAGCTTTCCAGTCTGGACAGCTGAT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458705.6 |
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| CDS-3UTR TCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCAACACAATACCCCACTaGGACAAGGTTGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYRKLSKKYREFSYNPFPNTIPH*DKVAVV Trigger: AACTACAGCAACCTTGTCTCAGTGGGGTATTGTGTT...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000307441.13 ENST00000432900.7 ENST00000458705.6 |
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| CDS-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTGGTGTACTTTAAGGTaGGAAGTCACACGGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYRKLSKKYREFSYNPFPWCTLR*EVTRKD Trigger: ATCCTTCCGTGTGACTTCGCACCTTAAAGTACACCA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR CAA 72 bp | TGTGTTTTCCGTTCACTGTTTTCCATTCTCTGCGTTTaGACAAATTACAGTACCCTAGAGAGTACTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: CVFRSLFSILCV*TNYSTLESTFT Trigger: AGTGAAAGTACTCTCTAGGGTACTGTAATTTGTCAAAACGCAGAGAATGGAAAACAGTGAACGGAAAACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| CDS-3UTR GCA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTCTTTTAGGGATCACTaGTTGTTCATTTTGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYRKLSKKYREFSYNPFPSFRDH*LFILFC Trigger: ACAGAACAAAATGAACAAGCAGTGATCCCTAAAAGA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000307441.13 |
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| 3UTR CAA 72 bp | ACCAACTTGAGTAAGTTCTCCTGTATTCCTTCTGTGTaGAGAGGTTTTAACATGAATGGATATTGGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TNLSKFSCIPSV*RGFNMNGYWIL Trigger: CAAAATCCAATATCCATTCATGTTAAAACCTCTCAACACAGAAGGAATACAGGAGAACTTACTCAAGTTGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| 3UTR CAA 72 bp | TCTATCTACCAGCAAGGTAACATCGATTTCTTGGACTaGACCATATACTATGATTATACATTATCCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIYQQGNIDFLD*TIYYDYTLSLE Trigger: CTCTAAGGATAATGTATAATCATAGTATATGGTCAAGTCCAAGAAATCGATGTTACCTTGCTGGTAGATAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| CDS-3UTR CAA 90 bp | AGAGGGAGGCAGAAAGAGCAAGTGAGCGTGAGACAAAAACAAGTGTGGGGTGGGGACTTCTGTTCTACCTaGTTCATTTTGTTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRQKEQVSVRQKQVWGGDFCST*FILFCS Trigger: AGAACAGAACAAAATGAACAAGGTAGAACAGAAGTC...CCCACCCCACACTTGTTTTTGTCTCACGCTCACTTGCTCTTTCTGCCTCCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000469037.2 |
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| CDS-3UTR CAA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCTTTAGGGATCACTGCTaGTTCATTTTGTTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GYRKLSKKYREFSYNPFPFRDHC*FILFCS Trigger: AGAACAGAACAAAATGAACAAGCAGTGATCCCTAAA...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000307441.13 |
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| CDS-3UTR CAA 90 bp | GGTTACAGAAAGTTGAGCAAAAAGTATAGAGAATTCTCATATAACCCTTTCCCCGACTTCTGTTCTACCTaGTTCATTTTGTTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GYRKLSKKYREFSYNPFPDFCST*FILFCS Trigger: AGAACAGAACAAAATGAACAAGGTAGAACAGAAGTC...GGGGAAAGGGTTATATGAGAATTCTCTATACTTTTTGCTCAACTTTCTGTAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 |
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| CDS GCA 72 bp | ACAACTCTGAAGATACAGCCCACTCCCTCGTCGGGTTaGATTCGCCATAGAAAAGCGCGTAGACCCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: TTLKIQPTPSSG*IRHRKARRPLK Trigger: TTTCAAGGGTCTACGCGCTTTTCTATGGCGAATGCAACCCGACGAGGGAGTGGGCTGTATCTTCAGAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000307441.13 ENST00000374618.7 ENST00000432900.7 ENST00000458705.6 ENST00000469037.2 ENST00000476504.5 ENST00000478556.1 |
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