RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF329 (Homo sapiens)

Ensembl gene IDs: ENSG00000181894

Ensembl transcript IDs: ENST00000358067.5, ENST00000500161.2, ENST00000597186.5, ENST00000598312.6, ENST00000601887.1

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTaGATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTG +
Preference number: 1 (lower is better)
Translates to: RWKLPTTGLFIPIMF*MHSQVLSVVSPPCL
Trigger: CAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR GCA 90 bp TCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGAC +
Preference number: 1 (lower is better)
Translates to: SECIHRFSLWCHPHV*TFHSSVCVVMSGTD
Trigger: GTCTGTACCAGACATGACAACACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR TCA 90 bp TGCACATTTCATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTaGATCATCCCCAAAGACTTTTCTGCCCTCATCCTAAGTTGTCTC +
Preference number: 1 (lower is better)
Translates to: CTFHSSVCVVMSGTD*IIPKDFSALILSCL
Trigger: GAGACAACTTAGGATGAGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAATGAAATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR GCA 90 bp CAGACATACATTCAAACAGGAAAATCTCACACATTCTGTGGTGTGTaGAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTG +
Preference number: 1 (lower is better)
Translates to: QTYIQTGKSHTFCGV*STALCGLSHCTPLL
Trigger: CAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAATGTGTGAGATTTTCCTGTTTGAATGTATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR CCA 90 bp AGGAAAATCTCACACATTCTGTGGTGTGTGCAGTACAGCACTGTGTaGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTA +
Preference number: 1 (lower is better)
Translates to: RKISHILWCVQYSTV*TLSLYTFVVTENTV
Trigger: TACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAATGTGTGAGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR CCA 90 bp TATAATGCAGACATACATTCAAACAGGAAAATCTCACACATTCTGTaGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACC +
Preference number: 1 (lower is better)
Translates to: YNADIHSNRKISHIL*CVQYSTVWTLSLYT
Trigger: GGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAATGTGTGAGATTTTCCTGTTTGAATGTATGTCTGCATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR GCA 90 bp TTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTaGAGGAGTATAATGCAGACATACATTCAAACAGGAAAATCTCAC +
Preference number: 1 (lower is better)
Translates to: FIHLVCPPATSPQHY*RSIMQTYIQTGKSH
Trigger: GTGAGATTTTCCTGTTTGAATGTATGTCTGCATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR GCA 90 bp TTCATTGTTCATTCACAGGTAATTTATTCACCTAGTTTGCCCTCCTaGAACGAGTCCTCAGCATTATTGCAGGAGTATAATGCAGACATA +
Preference number: 1 (lower is better)
Translates to: FIVHSQVIYSPSLPS*NESSALLQEYNADI
Trigger: TATGTCTGCATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGAATGAACAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCGVRVN*KTHVAP
Trigger: GGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCC...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAGGCAGAGGTTGCTGTaGGTGGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQRQRLL*VEIMPL
Trigger: CAGTGGCATGATCTCCACTCACAGCAACCTCTGCCT...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCTCTGGAGTTCCCCAATaGGCAGACTTAACAGTGTGG +
Preference number: 2 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPSGVPQ*ADLTVW
Trigger: CCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGA...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTGVRVN*KTHVAP
Trigger: GGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCC...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIGVRVN*KTHVAP
Trigger: GGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCC...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLGVRVN*KTHVAP
Trigger: GGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCC...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGAGAGGTTGCTGTGAGTaGAGATCATGCCACTGCACA +
Preference number: 2 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMRGCCE*RSCHCT
Trigger: TGTGCAGTGGCATGATCTCCACTCACAGCAACCTCT...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR CAA 90 bp CACATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATaGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTGCC +
Preference number: 2 (lower is better)
Translates to: HILWCVQYSTVWTLS*YTFVVTENTVRAPA
Trigger: GGCAGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR GCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTGGAGATCATGCCACTaGACAGTGAGACTCTGTCCG +
Preference number: 2 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLWRSCH*TVRLCP
Trigger: CGGACAGAGTCTCACTGTGCAGTGGCATGATCTCCA...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGCACAGGTTCTCTCTGTaGTGTCACCCCCATGTTTGC +
Preference number: 2 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRHRFSL*CHPHVC
Trigger: GCAAACATGGGGGTGACACCACAGAGAGAACCTGTG...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCACACAGGTTCTCTCTGTaGTGTCACCCCCATGTTTGC +
Preference number: 2 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSHRFSL*CHPHVC
Trigger: GCAAACATGGGGGTGACACCACAGAGAGAACCTGTG...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTAGGATTCTTTTCTACTaGCCAGAGAGGAGTCAGATC +
Preference number: 2 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCRILFY*PERSQI
Trigger: GATCTGACTCCTCTCTGGTCAGTAGAAAAGAATCCT...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATAGGCAGAGGTTGCTGTaGGTGGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHRQRLL*VEIMPL
Trigger: CAGTGGCATGATCTCCACTCACAGCAACCTCTGCCT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGAGAGGTTGCTGTGAGTaGAGATCATGCCACTGCACA +
Preference number: 2 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLRGCCE*RSCHCT
Trigger: TGTGCAGTGGCATGATCTCCACTCACAGCAACCTCT...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCAGAGGTTGCTGTGAGTaGAGATCATGCCACTGCACA +
Preference number: 2 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSRGCCE*RSCHCT
Trigger: TGTGCAGTGGCATGATCTCCACTCACAGCAACCTCT...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 2 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTGCTTACGTACAAGGTaGAAACTCCCTACTACAGGG +
Preference number: 2 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLCLRTR*KLPTTG
Trigger: CCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCA...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTAGGATTCTTTTCTACTaGCCAGAGAGGAGTCAGATC +
Preference number: 2 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIRILFY*PERSQI
Trigger: GATCTGACTCCTCTCTGGTCAGTAGAAAAGAATCCT...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCAGGATTCTTTTCTACTaGCCAGAGAGGAGTCAGATC +
Preference number: 2 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFRILFY*PERSQI
Trigger: GATCTGACTCCTCTCTGGTCAGTAGAAAAGAATCCT...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR GCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: SNKPHLLEAALSILAQACCHPHV*TFHSSV
Trigger: CACACTGGAATGAAATGTGCAAACATGGGGGTGACA...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR GCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHCHPHV*TFHSSV
Trigger: CACACTGGAATGAAATGTGCAAACATGGGGGTGACA...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACATGTCTGGTACAGACTaGATCATCCCCAAAGACTTT +
Preference number: 2 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHMSGTD*IIPKDF
Trigger: AAAGTCTTTGGGGATGATTCAGTCTGTACCAGACAT...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTATGTCTGGTACAGACTaGATCATCCCCAAAGACTTT +
Preference number: 2 (lower is better)
Translates to: SNKPHLLEAALSILAQACMSGTD*IIPKDF
Trigger: AAAGTCTTTGGGGATGATTCAGTCTGTACCAGACAT...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTATGTCTGGTACAGACTaGATCATCCCCAAAGACTTT +
Preference number: 2 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIMSGTD*IIPKDF
Trigger: AAAGTCTTTGGGGATGATTCAGTCTGTACCAGACAT...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGATGTCTGGTACAGACTaGATCATCCCCAAAGACTTT +
Preference number: 2 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLMSGTD*IIPKDF
Trigger: AAAGTCTTTGGGGATGATTCAGTCTGTACCAGACAT...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR GCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCCCAAAGACTTTTCTaGCCTCATCCTAAGTTGTCT +
Preference number: 2 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAPQRLF*PHPKLS
Trigger: AGACAACTTAGGATGAGGGCAGAAAAGTCTTTGGGG...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCGCAGACTTAACAGTGTaGCTCAGCAATGTCTCACAT +
Preference number: 2 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAADLTV*LSNVSH
Trigger: ATGTGAGACATTGCTGAGCCACACTGTTAAGTCTGC...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 2 (lower is better)
Translates to: KPHLLEAALSILAQACFSVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 2 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATTGCTTACGTACAAGGTaGAAACTCCCTACTACAGGG +
Preference number: 2 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHCLRTR*KLPTTG
Trigger: CCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCA...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGAGGATTCTTTTCTACTaGCCAGAGAGGAGTCAGATC +
Preference number: 2 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRRILFY*PERSQI
Trigger: GATCTGACTCCTCTCTGGTCAGTAGAAAAGAATCCT...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR TCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGATTCCAATCATGTTCTaGATGCATTCACAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLIPIMF*MHSQVL
Trigger: GAGAACCTGTGAATGCATTCAGAACATGATTGGAAT...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR GCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHCHPHV*TFHSSV
Trigger: CACACTGGAATGAAATGTGCAAACATGGGGGTGACA...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR GCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCCAATCATGTTCTGAATaGATTCACAGGTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSQSCSE*IHRFSL
Trigger: CAGAGAGAACCTGTGAATGCATTCAGAACATGATTG...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 2 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR CAA 90 bp AGGAACGACTTCATTGTTCATTCACAGGTAATTTATTCACCTAGTTaGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAAT +
Preference number: 2 (lower is better)
Translates to: RNDFIVHSQVIYSPS*PSCNESSALLQEYN
Trigger: ATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGAATGAACAATGAAGTCGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTTGCCCTCATCCTAAGTaGTCTCTGGAGTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCCPHPK*SLEFPN
Trigger: ATTGGGGAACTCCAGAGACAACTTAGGATGAGGGCA...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTGCCCTCATCCTAAGTaGTCTCTGGAGTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: SNKPHLLEAALSILAQACCPHPK*SLEFPN
Trigger: ATTGGGGAACTCCAGAGACAACTTAGGATGAGGGCA...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTGCCCTCATCCTAAGTaGTCTCTGGAGTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTCPHPK*SLEFPN
Trigger: ATTGGGGAACTCCAGAGACAACTTAGGATGAGGGCA...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTTGCCCTCATCCTAAGTaGTCTCTGGAGTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPCPHPK*SLEFPN
Trigger: ATTGGGGAACTCCAGAGACAACTTAGGATGAGGGCA...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGT +
Preference number: 3 (lower is better)
Translates to: SNKPHLLEAALSILAQACVSPPC*HISFQC
Trigger: ACACTGGAATGAAATGTGCAAACATGGGGGTGACAC...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGT +
Preference number: 3 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLVSPPC*HISFQC
Trigger: ACACTGGAATGAAATGTGCAAACATGGGGGTGACAC...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR GCA 72 bp ATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTGTGTGTTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: IHRFSLWCHPHV*TFHSSVCVVMS
Trigger: AGACATGACAACACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACATTCCAGTGTGTGTGTaGTCATGTCTGGTACAGACT +
Preference number: 3 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHIPVCV*SCLVQT
Trigger: AGTCTGTACCAGACATGACAACACACACACTGGAAT...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR CCA 72 bp CAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTaGTGTCACCCCCATGTTTGCACATTTCATTCCAGT +
Preference number: 3 (lower is better)
Translates to: QSCSECIHRFSL*CHPHVCTFHSS
Trigger: ACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGT +
Preference number: 3 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHVSPPC*HISFQC
Trigger: ACACTGGAATGAAATGTGCAAACATGGGGGTGACAC...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGAAGTTGATTCAGTGTTaGCTTACGTACAAGGTGGAA +
Preference number: 3 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRKLIQC*LTYKVE
Trigger: TTCCACCTTGTACGTAAGCAAACACTGAATCAACTT...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR-3UTR CAA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTAAGTTGATTCAGTGTTaGCTTACGTACAAGGTGGAA +
Preference number: 3 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPKLIQC*LTYKVE
Trigger: TTCCACCTTGTACGTAAGCAAACACTGAATCAACTT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR TCA 72 bp CATGGCAATAAAACCTTTATAATGGTTCACAGTGGCTaGATTAGAAGCATCCTAAATGAACAACCATGGAGG +
Preference number: 3 (lower is better)
Translates to: HGNKTFIMVHSG*IRSILNEQPWR
Trigger: CCTCCATGGTTGTTCATTTAGGATGCTTCTAATTCAGCCACTGTGAACCATTATAAAGGTTTTATTGCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCCGCAGCCCTAGCCCGTaGACCCACGGCGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPRSPSP*THGGAE
Trigger: CTCGGCTCCGCCGTGGGTGCACGGGCTAGGGCTGCG...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR TCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTAACGGCTCGGGCGGCTaGCACCGCAGTCCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCNGSGG*HRSPRE
Trigger: CTCTCGCGGACTGCGGTGTCAGCCGCCCGAGCCGTT...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGGACAGCAAGACCGGTTaGCGGCCGGCGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMDSKTG*RPAAAM
Trigger: CATGGCTGCCGCCGGCCGCCAACCGGTCTTGCTGTC...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACGGTAGCGGCCACCCCTaGGAGCACTCGGCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHGSGHP*EHSAPF
Trigger: GAACGGGGCCGAGTGCTCTCAGGGGTGGCCGCTACC...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTTCCTCTCATGCTGGGTaGGGTACGAGCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCSSHAG*GTSRPG
Trigger: TCCGGGACGGCTCGTACCTCACCCAGCATGAGAGGA...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGGGCTGCAGTGAGCTGTaGTCGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKGCSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCACGATCACAGCTCACTGCAGCC...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTGCACTCCAGCCTGGGTaGGACAGCAAGACCGGTTGG +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCALQPG*DSKTGW
Trigger: CCAACCGGTCTTGCTGTCTCACCCAGGCTGGAGTGC...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGACTGAGGACACCGGCTaGGACCCTCCCTGCTATGGA +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKTEDTG*DPPCYG
Trigger: TCCATAGCAGGGAGGGTCCCAGCCGGTGTCCTCAGT...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTTCCGGGCCTGTTGGCTaGAACCCGCAGCCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VCCHVWYRLNHPQRLFCPSGPVG*NPQPCL
Trigger: GAGACACGGCTGCGGGTTCCAGCCAACAGGCCCGGA...AGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CCA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCACGACTCCGGGCCTGTTaGCTGGAACCCGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSRLRAC*LEPAAV
Trigger: CACGGCTGCGGGTTCCAGCCAACAGGCCCGGAGTCG...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTCCGGAAGGCGGGATCTaGGGACGATCCCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCPEGGI*GRSPFL
Trigger: GAGGAATGGGGATCGTCCCCAGATCCCGCCTTCCGG...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTGAGACAGCAAGACCCTaGCCAGGTGTCCGGGGAACG +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCETARP*PGVRGT
Trigger: CGTTCCCCGGACACCTGGCCAGGGTCTTGCTGTCTC...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTGACAGCAAGACCGGTTaGCGGCCGGCGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPDSKTG*RPAAAM
Trigger: CATGGCTGCCGCCGGCCGCCAACCGGTCTTGCTGTC...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGAACATTTTTCCACACTaGGGACACCGGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKNIFPH*GHRLGP
Trigger: GGGTCCCAGCCGGTGTCCTCAGTGTGGAAAAATGTT...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGGGCTGCAGTGAGCTGTaGTCGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQGCSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCACGATCACAGCTCACTGCAGCC...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACGCACTCCAGCCTGGGTaGGACAGCAAGACCGGTTGG +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHALQPG*DSKTGW
Trigger: CCAACCGGTCTTGCTGTCTCACCCAGGCTGGAGTGC...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGGTTGCCAGAACTCTCTaGGACGGTGGAAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMVARTL*DGGRSE
Trigger: CTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAAC...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTTCCTCTCATGCTGGGTaGGGTACGAGCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPSSHAG*GTSRPG
Trigger: TCCGGGACGGCTCGTACCTCACCCAGCATGAGAGGA...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCAGGCAGAGGTTGCTGTaGGTGGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPRQRLL*VEIMPL
Trigger: CAGTGGCATGATCTCCACTCACAGCAACCTCTGCCT...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATGGCTGCAGTGAGCTGTaGTCGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNGCSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCACGATCACAGCTCACTGCAGCC...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCACTGAGGACACCGGCTaGGACCCTCCCTGCTATGGA +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFTEDTG*DPPCYG
Trigger: TCCATAGCAGGGAGGGTCCCAGCCGGTGTCCTCAGT...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGACTGAGGACACCGGCTaGGACCCTCCCTGCTATGGA +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLTEDTG*DPPCYG
Trigger: TCCATAGCAGGGAGGGTCCCAGCCGGTGTCCTCAGT...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTCCTAACCTTGTGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VCCHVWYRLNHPQRLFCPPNLVI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGCCAGATCACAAGGTTAGG...AGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTAGGATCCTTGGACTGTaGGCAGGATCGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTRILGL*AGSQAA
Trigger: CGCTGCCTGCGATCCTGCCCACAGTCCAAGGATCCT...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTGGCGAGGAGGATCCTTaGACTGTGGGCAGGATCGCA +
Preference number: 4 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIGEEDP*TVGRIA
Trigger: TGCGATCCTGCCCACAGTCCAAGGATCCTCCTCGCC...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR TCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTGGTGGGAGATGTCAGTaGAGGGTTTCCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCGGRCQ*RVSHIR
Trigger: ACGAATGTGGGAAACCCTTCACTGACATCTCCCACC...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGTCCTCTCATGCTGGGTaGGGTACGAGCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRSSHAG*GTSRPG
Trigger: TCCGGGACGGCTCGTACCTCACCCAGCATGAGAGGA...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTAACATTTTTCCACACTaGGGACACCGGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: VCCHVWYRLNHPQRLFCPNIFPH*GHRLGP
Trigger: GGGTCCCAGCCGGTGTCCTCAGTGTGGAAAAATGTT...AGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTCCCAGGTGTGCTCTTTaGTGTCGAACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCPRCAL*CRTRDE
Trigger: CTCATCCCTTGTTCGACATCAAAGAGCACACCTGGG...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGTCTGGAGTTCCCCAATaGGCAGACTTAACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKSGVPQ*ADLTVW
Trigger: CCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGA...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTAGGCAGAGGTTGCTGTaGGTGGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFRQRLL*VEIMPL
Trigger: CAGTGGCATGATCTCCACTCACAGCAACCTCTGCCT...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCTGGCCAGGCTGGTCTTaGACTCCTAACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPWPGWS*TPNLVI
Trigger: GATCACAAGGTTAGGAGTTCAAGACCAGCCTGGCCA...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTTGGCCAGGCTGGTCTTaGACTCCTAACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCWPGWS*TPNLVI
Trigger: GATCACAAGGTTAGGAGTTCAAGACCAGCCTGGCCA...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGTGGAGATCATGCCACTaGACAGTGAGACTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMWRSCH*TVRLCP
Trigger: CGGACAGAGTCTCACTGTGCAGTGGCATGATCTCCA...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGCCTAGTTTGCCCTCCTaGAACGAGTCCTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKPSLPS*NESSAL
Trigger: TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGG...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTCACAGGTTCTCTCTGTaGTGTCACCCCCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCHRFSL*CHPHVC
Trigger: GCAAACATGGGGGTGACACCACAGAGAGAACCTGTG...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGCCTAACCTTGTGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRPNLVI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGCCAGATCACAAGGTTAGG...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTCCTAACCTTGTGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SNKPHLLEAALSILAQACPNLVI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGCCAGATCACAAGGTTAGG...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGTGTGAAAACATAAACTaGGGGCAGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQCENIN*GQARWL
Trigger: GAGCCACCGCGCCTGCCCCCAGTTTATGTTTTCACA...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597186.5
CDS-3UTR TCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCAGACGGTGGAAGGTCTaGGCTTGCAATCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPRRWKV*ACNQML
Trigger: GAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCT...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGAGACGGTGGAAGGTCTaGGCTTGCAATCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMRRWKV*ACNQML
Trigger: GAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCT...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACGTTGCCAGAACTCTCTaGGACGGTGGAAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHVARTL*DGGRSE
Trigger: CTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAAC...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATGTTGCCAGAACTCTCTaGGACGGTGGAAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNVARTL*DGGRSE
Trigger: CTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAAC...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGGTGGGAGATGTCAGTaGAGGGTTTCCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFGGRCQ*RVSHIR
Trigger: ACGAATGTGGGAAACCCTTCACTGACATCTCCCACC...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTCCACATTCTGGACACTaGTATGGGGTCTCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCPHSGH*YGVSLV
Trigger: CACTAAGGAGACCCCATATCAGTGTCCAGAATGTGG...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGAACATTTTTCCACACTaGGGACACCGGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRNIFPH*GHRLGP
Trigger: GGGTCCCAGCCGGTGTCCTCAGTGTGGAAAAATGTT...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGCCCAGGTGTGCTCTTTaGTGTCGAACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQPRCAL*CRTRDE
Trigger: CTCATCCCTTGTTCGACATCAAAGAGCACACCTGGG...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCAGCGAGACTCCGTCTCTaGAAGGCAGAGGGATCCATT +
Preference number: 4 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSARLRL*KAEGSI
Trigger: AATGGATCCCTCTGCCTTTCAGAGACGGAGTCTCGC...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597186.5
CDS-3UTR CCA 90 bp GTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTCTCAAGTGTCCCTCCTaGTTCTCACAGTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: VCCHVWYRLNHPQRLFCPLKCPS*FSQSQP
Trigger: TGGTTGGGACTGTGAGAACCAGGAGGGACACTTGAG...AGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGAGATGCACTGTAAGGTaGGAGATGTCAGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKRCTVR*EMSVKG
Trigger: ACCCTTCACTGACATCTCCCACCTTACAGTGCATCT...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFGVRVN*KTHVAP
Trigger: GGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCC...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNGVRVN*KTHVAP
Trigger: GGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCC...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGTGCTTACGTACAAGGTaGAAACTCCCTACTACAGGG +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKCLRTR*KLPTTG
Trigger: CCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCA...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTAGAGGTTGCTGTGAGTaGAGATCATGCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCRGCCE*RSCHCT
Trigger: TGTGCAGTGGCATGATCTCCACTCACAGCAACCTCT...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCCGTTCTATCCCGCAGTaGTTTGGGGAGTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSRSIPQ*FGECRS
Trigger: TGACCTGCACTCCCCAAACCACTGCGGGATAGAACG...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR TCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTCAGACCACTAACATTTaGGTCAGGTGCATGGAAACC +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCQTTNI*VRCMET
Trigger: GGTTTCCATGCACCTGACTCAAATGTTAGTGGTCTG...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTCTTCCATGGAATGGTTaGAGCCTTTTCCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCLPWNG*SLFHRH
Trigger: ATGCCTGTGGAAAAGGCTTCAACCATTCCATGGAAG...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTCTTCCATGGAATGGTTaGAGCCTTTTCCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCLPWNG*SLFHRH
Trigger: ATGCCTGTGGAAAAGGCTTCAACCATTCCATGGAAG...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTGGTGGGAGATGTCAGTaGAGGGTTTCCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTGGRCQ*RVSHIR
Trigger: ACGAATGTGGGAAACCCTTCACTGACATCTCCCACC...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTGGTACGCACTCTCGATaGAAGTCTTGCCACATTCTT +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCGTHSR*KSCHIL
Trigger: AAGAATGTGGCAAGACTTTCATCGAGAGTGCGTACC...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTGGTACGCACTCTCGATaGAAGTCTTGCCACATTCTT +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCGTHSR*KSCHIL
Trigger: AAGAATGTGGCAAGACTTTCATCGAGAGTGCGTACC...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCACCCAGGTGTGCTCTTTaGTGTCGAACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSPRCAL*CRTRDE
Trigger: CTCATCCCTTGTTCGACATCAAAGAGCACACCTGGG...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGCCCAGGTGTGCTCTTTaGTGTCGAACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLPRCAL*CRTRDE
Trigger: CTCATCCCTTGTTCGACATCAAAGAGCACACCTGGG...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTAGGCAGAGGTTGCTGTaGGTGGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPRQRLL*VEIMPL
Trigger: CAGTGGCATGATCTCCACTCACAGCAACCTCTGCCT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTAGGCAGAGGTTGCTGTaGGTGGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSRQRLL*VEIMPL
Trigger: CAGTGGCATGATCTCCACTCACAGCAACCTCTGCCT...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCAGAGTTAAAGCTGATTaGCTCAAGTGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPRVKAD*LKCPSW
Trigger: CCAGGAGGGACACTTGAGGCAATCAGCTTTAACTCT...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGGAGTCTCTGATGTACTaGCAGGTGAGAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMESLMY*QVRVLL
Trigger: AAGCAGAACTCTCACCTGGCAGTACATCAGAGACTC...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGTTGCTCTCCCAGGTGTaGTCTTTGATGTCGAACAAG +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMLLSQV*SLMSNK
Trigger: CTTGTTCGACATCAAAGAGCACACCTGGGAGAGCAA...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCTATGTTTCCATGGGTTaGTCTCCCAGGTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPYVSMG*SPRCAL
Trigger: AAGAGCACACCTGGGAGAGCAACCCATGGAAACATA...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTGGAGATCATGCCACTaGACAGTGAGACTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: SNKPHLLEAALSILAQACWRSCH*TVRLCP
Trigger: CGGACAGAGTCTCACTGTGCAGTGGCATGATCTCCA...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTCCTAGTTTGCCCTCCTaGAACGAGTCCTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFPSLPS*NESSAL
Trigger: TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGG...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGCAGTGGTTTGGGGAGTaGAGGTCATCACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRQWFGE*RSSLPP
Trigger: GGGTGGGAGTGATGACCTGCACTCCCCAAACCACTG...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR GCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTACAAGATTATACCATTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCTRLYH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAATGGTATAATCTTGT...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597186.5
CDS-3UTR CCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTAACCATCACCTAAACTaGACAAGCAGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCNHHLN*TSRELP
Trigger: GGGAAGTTCCCTGCTTGTCCAGTTTAGGTGATGGTT...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGAGATGCACTGTAAGGTaGGAGATGTCAGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMRCTVR*EMSVKG
Trigger: ACCCTTCACTGACATCTCCCACCTTACAGTGCATCT...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCACAGGTTCTCTCTGTaGTGTCACCCCCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNHRFSL*CHPHVC
Trigger: GCAAACATGGGGGTGACACCACAGAGAGAACCTGTG...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGCACAGGTTCTCTCTGTaGTGTCACCCCCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLHRFSL*CHPHVC
Trigger: GCAAACATGGGGGTGACACCACAGAGAGAACCTGTG...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTTGCTTACGTACAAGGTaGAAACTCCCTACTACAGGG +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCCLRTR*KLPTTG
Trigger: CCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCA...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTTGCTTACGTACAAGGTaGAAACTCCCTACTACAGGG +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCCLRTR*KLPTTG
Trigger: CCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCA...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGATCTCACACATTCTGTaGTGTGTGCAGTACAGCACT +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKISHIL*CVQYST
Trigger: AGTGCTGTACTGCACACACCACAGAATGTGTGAGAT...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTATCCCGCAGTGGTTTaGGGAGTGCAGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFYPAVV*GVQVIT
Trigger: AGTGATGACCTGCACTCCCCAAACCACTGCGGGATA...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTTCATATCCCAAACTCTaGAAGGCAGAGGGATCCATT +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCSYPKL*KAEGSI
Trigger: AATGGATCCCTCTGCCTTTCAGAGTTTGGGATATGA...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000598312.6
CDS-3UTR TCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGTCATATCCCAAACTCTaGAAGGCAGAGGGATCCATT +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMSYPKL*KAEGSI
Trigger: AATGGATCCCTCTGCCTTTCAGAGTTTGGGATATGA...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358067.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGAGGGAACTTCCCTTGTaGATCTTTCCACTTCTACAT +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKRELPL*IFPLLH
Trigger: ATGTAGAAGTGGAAAGATTCACAAGGGAAGTTCCCT...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCAGACGGTGGAAGGTCTaGGCTTGCAATCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSRRWKV*ACNQML
Trigger: GAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCT...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGAGACGGTGGAAGGTCTaGGCTTGCAATCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLRRWKV*ACNQML
Trigger: GAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCT...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATGTTGCCAGAACTCTCTaGGACGGTGGAAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHVARTL*DGGRSE
Trigger: CTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAAC...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTCAGACCACTAACATTTaGGTCAGGTGCATGGAAACC +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFQTTNI*VRCMET
Trigger: GGTTTCCATGCACCTGACTCAAATGTTAGTGGTCTG...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGGTACGCACTCTCGATaGAAGTCTTGCCACATTCTT +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFGTHSR*KSCHIL
Trigger: AAGAATGTGGCAAGACTTTCATCGAGAGTGCGTACC...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTGGCCAGCGATATTCCTaGAAAGTTTCTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: VCCHVWYRLNHPQRLFCPGQRYS*KVSDTG
Trigger: ACCAGTGTCAGAAACTTTTCAGGAATATCGCTGGCC...AGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCACATTCTGGACACTaGTATGGGGTCTCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIPHSGH*YGVSLV
Trigger: CACTAAGGAGACCCCATATCAGTGTCCAGAATGTGG...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCCCACATTCTGGACACTaGTATGGGGTCTCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFPHSGH*YGVSLV
Trigger: CACTAAGGAGACCCCATATCAGTGTCCAGAATGTGG...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATAACATTTTTCCACACTaGGGACACCGGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHNIFPH*GHRLGP
Trigger: GGGTCCCAGCCGGTGTCCTCAGTGTGGAAAAATGTT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGAGGATTCTTTTCTACTaGCCAGAGAGGAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMRILFY*PERSQI
Trigger: GATCTGACTCCTCTCTGGTCAGTAGAAAAGAATCCT...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTCTGGAGTTCCCCAATaGGCAGACTTAACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLSGVPQ*ADLTVW
Trigger: CCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGA...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGTCTGGAGTTCCCCAATaGGCAGACTTAACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRSGVPQ*ADLTVW
Trigger: CCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGA...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGATGTCTGGTACAGACTaGATCATCCCCAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKMSGTD*IIPKDF
Trigger: AAAGTCTTTGGGGATGATTCAGTCTGTACCAGACAT...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTTTGCTCTCCCAGGTGTaGTCTTTGATGTCGAACAAG +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFLLSQV*SLMSNK
Trigger: CTTGTTCGACATCAAAGAGCACACCTGGGAGAGCAA...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTCCCCAAAGACTTTTCTaGCCTCATCCTAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCPQRLF*PHPKLS
Trigger: AGACAACTTAGGATGAGGGCAGAAAAGTCTTTGGGG...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTCCCCAAAGACTTTTCTaGCCTCATCCTAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCPQRLF*PHPKLS
Trigger: AGACAACTTAGGATGAGGGCAGAAAAGTCTTTGGGG...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCCHPHV*TFHSSV
Trigger: CACACTGGAATGAAATGTGCAAACATGGGGGTGACA...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMCHPHV*TFHSSV
Trigger: CACACTGGAATGAAATGTGCAAACATGGGGGTGACA...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTTTTATTCACCTAGTTTaGCCTCCTGCAACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCFIHLV*PPATSP
Trigger: AGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAA...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCTTTATTCACCTAGTTTaGCCTCCTGCAACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPFIHLV*PPATSP
Trigger: AGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAA...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTCAAACCATCACCTAAACTaGACAAGCAGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: VLSCLVQTESSPKTFLPSNHHLN*TSRELP
Trigger: GGGAAGTTCCCTGCTTGTCCAGTTTAGGTGATGGTT...TGAGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGACCATTATGTTTCCATaGGTTGCTCTCCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQTIMFP*VALPGV
Trigger: CACACCTGGGAGAGCAACCCATGGAAACATAATGGT...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTACTGGAAGACTCATGTaGCCCCCAACCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCTGRLM*PPTIMF
Trigger: AAACATAATGGTTGGGGGCCACATGAGTCTTCCAGT...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRGVRVN*KTHVAP
Trigger: GGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCC...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATAGAGGTTGCTGTGAGTaGAGATCATGCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNRGCCE*RSCHCT
Trigger: TGTGCAGTGGCATGATCTCCACTCACAGCAACCTCT...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTCAGTACAGCACTGTGTaGACTCTCTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFQYSTV*TLSLYT
Trigger: GGTGTACAATGAGAGAGTCCACACAGTGCTGTACTG...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTCACAGTACAGCACTGTGTaGACTCTCTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: VLSCLVQTESSPKTFLPSQYSTV*TLSLYT
Trigger: GGTGTACAATGAGAGAGTCCACACAGTGCTGTACTG...TGAGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR CAA 72 bp CATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGTGTGTGTTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: HSQVLSVVSPPC*HISFQCVCCHV
Trigger: GACATGACAACACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTAGGGAACTTCCCTTGTaGATCTTTCCACTTCTACAT +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCRELPL*IFPLLH
Trigger: ATGTAGAAGTGGAAAGATTCACAAGGGAAGTTCCCT...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCAGACCACTAACATTTaGGTCAGGTGCATGGAAACC +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNQTTNI*VRCMET
Trigger: GGTTTCCATGCACCTGACTCAAATGTTAGTGGTCTG...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGCTTCCATGGAATGGTTaGAGCCTTTTCCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRLPWNG*SLFHRH
Trigger: ATGCCTGTGGAAAAGGCTTCAACCATTCCATGGAAG...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTCTTCCATGGAATGGTTaGAGCCTTTTCCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTLPWNG*SLFHRH
Trigger: ATGCCTGTGGAAAAGGCTTCAACCATTCCATGGAAG...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATGGTGGGAGATGTCAGTaGAGGGTTTCCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHGGRCQ*RVSHIR
Trigger: ACGAATGTGGGAAACCCTTCACTGACATCTCCCACC...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGGGCCAGCGATATTCCTaGAAAGTTTCTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLGQRYS*KVSDTG
Trigger: ACCAGTGTCAGAAACTTTTCAGGAATATCGCTGGCC...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGTGGCCAGGCTGGTCTTaGACTCCTAACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRWPGWS*TPNLVI
Trigger: GATCACAAGGTTAGGAGTTCAAGACCAGCCTGGCCA...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACAGAGTTAAAGCTGATTaGCTCAAGTGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHRVKAD*LKCPSW
Trigger: CCAGGAGGGACACTTGAGGCAATCAGCTTTAACTCT...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTAGAGTTAAAGCTGATTaGCTCAAGTGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIRVKAD*LKCPSW
Trigger: CCAGGAGGGACACTTGAGGCAATCAGCTTTAACTCT...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCAGAGTTAAAGCTGATTaGCTCAAGTGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSRVKAD*LKCPSW
Trigger: CCAGGAGGGACACTTGAGGCAATCAGCTTTAACTCT...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTGAGCTTGCAATCAAATaGTCCCCAAAACCAGGATAT +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCELAIK*SPKPGY
Trigger: ATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTC...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTGAGCTTGCAATCAAATaGTCCCCAAAACCAGGATAT +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCELAIK*SPKPGY
Trigger: ATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTC...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTGAGTCTCTGATGTACTaGCAGGTGAGAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTESLMY*QVRVLL
Trigger: AAGCAGAACTCTCACCTGGCAGTACATCAGAGACTC...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCAGAGTCTCTGATGTACTaGCAGGTGAGAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSESLMY*QVRVLL
Trigger: AAGCAGAACTCTCACCTGGCAGTACATCAGAGACTC...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACGAGTCTCTGATGTACTaGCAGGTGAGAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHESLMY*QVRVLL
Trigger: AAGCAGAACTCTCACCTGGCAGTACATCAGAGACTC...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTGCTCTCCCAGGTGTaGTCTTTGATGTCGAACAAG +
Preference number: 4 (lower is better)
Translates to: SNKPHLLEAALSILAQACLLSQV*SLMSNK
Trigger: CTTGTTCGACATCAAAGAGCACACCTGGGAGAGCAA...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTATGTTTCCATGGGTTaGTCTCCCAGGTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SNKPHLLEAALSILAQACYVSMG*SPRCAL
Trigger: AAGAGCACACCTGGGAGAGCAACCCATGGAAACATA...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATTATGTTTCCATGGGTTaGTCTCCCAGGTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNYVSMG*SPRCAL
Trigger: AAGAGCACACCTGGGAGAGCAACCCATGGAAACATA...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGTATGTTTCCATGGGTTaGTCTCCCAGGTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRYVSMG*SPRCAL
Trigger: AAGAGCACACCTGGGAGAGCAACCCATGGAAACATA...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGCCCCAAAGACTTTTCTaGCCTCATCCTAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQPQRLF*PHPKLS
Trigger: AGACAACTTAGGATGAGGGCAGAAAAGTCTTTGGGG...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACACATTCTGTGGTGTGTaGAGTACAGCACTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHTFCGV*STALCG
Trigger: TCCACACAGTGCTGTACTGCACACACCACAGAATGT...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTACATTCTGTGGTGTGTaGAGTACAGCACTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SNKPHLLEAALSILAQACTFCGV*STALCG
Trigger: TCCACACAGTGCTGTACTGCACACACCACAGAATGT...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTCCTAGTTTGCCCTCCTaGAACGAGTCCTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPPSLPS*NESSAL
Trigger: TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGG...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTTCAGGTTGTAGTTCTTaGAGAAGGACTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCSGCSS*RRTFHT
Trigger: AGTGTGGAAAGTCCTTCTCCAAGAACTACAACCTGA...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTAGATGCACTGTAAGGTaGGAGATGTCAGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIRCTVR*EMSVKG
Trigger: ACCCTTCACTGACATCTCCCACCTTACAGTGCATCT...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCAGATGCACTGTAAGGTaGGAGATGTCAGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFRCTVR*EMSVKG
Trigger: ACCCTTCACTGACATCTCCCACCTTACAGTGCATCT...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTTTCTGGACACTGATATaGGGTCTCCTTAGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCFWTLI*GLLSVN
Trigger: ATTCACACTAAGGAGACCCCATATCAGTGTCCAGAA...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCACCATTATGTTTCCATaGGTTGCTCTCCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFTIMFP*VALPGV
Trigger: CACACCTGGGAGAGCAACCCATGGAAACATAATGGT...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTACTGGAAGACTCATGTaGCCCCCAACCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFTGRLM*PPTIMF
Trigger: AAACATAATGGTTGGGGGCCACATGAGTCTTCCAGT...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGGCAGACTTAACAGTGTaGCTCAGCAATGTCTCACAT +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQADLTV*LSNVSH
Trigger: ATGTGAGACATTGCTGAGCCACACTGTTAAGTCTGC...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGCACAGGTTCTCTCTGTaGTGTCACCCCCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRHRFSL*CHPHVC
Trigger: GCAAACATGGGGGTGACACCACAGAGAGAACCTGTG...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTAGAGGTTGCTGTGAGTaGAGATCATGCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPRGCCE*RSCHCT
Trigger: TGTGCAGTGGCATGATCTCCACTCACAGCAACCTCT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTTTCAAGCAATTCTCCTaGGAGGCAGAGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSFKQFS*EAEVAV
Trigger: CACAGCAACCTCTGCCTCCCAGGAGAATTGCTTGAA...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTATAATTCCAGCAGTTTaGGAGGCTGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSIIPAV*EAEVGG
Trigger: TCCACCCACCTCAGCCTCCCAAACTGCTGGAATTAT...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597186.5
CDS-3UTR TCA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTTCATATCCCAAACTCTaGAAGGCAGAGGGATCCATT +
Preference number: 4 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFISYPKL*KAEGSI
Trigger: AATGGATCCCTCTGCCTTTCAGAGTTTGGGATATGA...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000598312.6
CDS-3UTR TCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTCAGACCACTAACATTTaGGTCAGGTGCATGGAAACC +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSQTTNI*VRCMET
Trigger: GGTTTCCATGCACCTGACTCAAATGTTAGTGGTCTG...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCGGCCAGCGATATTCCTaGAAAGTTTCTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAGQRYS*KVSDTG
Trigger: ACCAGTGTCAGAAACTTTTCAGGAATATCGCTGGCC...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTATGTCGAACAAGGGATaGGCTCTTTTGGAACATTTT +
Preference number: 4 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCMSNKG*ALLEHF
Trigger: AAAATGTTCCAAAAGAGCTCATCCCTTGTTCGACAT...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTAGGATTCTTTTCTACTaGCCAGAGAGGAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTRILFY*PERSQI
Trigger: GATCTGACTCCTCTCTGGTCAGTAGAAAAGAATCCT...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTATGGTTCACAGTGGCTaGATTAGAAGCATCCTAAAT +
Preference number: 4 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCMVHSG*IRSILN
Trigger: ATTTAGGATGCTTCTAATTCAGCCACTGTGAACCAT...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACATGGAAACCATTTGTTaGCAGAACTCTCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHMETIC*QNSLRR
Trigger: CCGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCAT...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCAATGGAAACCATTTGTTaGCAGAACTCTCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSMETIC*QNSLRR
Trigger: CCGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCAT...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCATGGAAACCATTTGTTaGCAGAACTCTCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSMETIC*QNSLRR
Trigger: CCGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCAT...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTTTGCTCTCCCAGGTGTaGTCTTTGATGTCGAACAAG +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSLLSQV*SLMSNK
Trigger: CTTGTTCGACATCAAAGAGCACACCTGGGAGAGCAA...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACCCCCAAAGACTTTTCTaGCCTCATCCTAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHPQRLF*PHPKLS
Trigger: AGACAACTTAGGATGAGGGCAGAAAAGTCTTTGGGG...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTGTCACCCCCATGTTTaGACATTTCATTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSCHPHV*TFHSSV
Trigger: CACACTGGAATGAAATGTGCAAACATGGGGGTGACA...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTCAATCATGTTCTGAATaGATTCACAGGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCQSCSE*IHRFSL
Trigger: CAGAGAGAACCTGTGAATGCATTCAGAACATGATTG...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCACATTCTGTGGTGTGTaGAGTACAGCACTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRATFCGV*STALCG
Trigger: TCCACACAGTGCTGTACTGCACACACCACAGAATGT...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACTTTATTCACCTAGTTTaGCCTCCTGCAACGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHFIHLV*PPATSP
Trigger: AGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAA...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTAACCATCACCTAAACTaGACAAGCAGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPNHHLN*TSRELP
Trigger: GGGAAGTTCCCTGCTTGTCCAGTTTAGGTGATGGTT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGTCAGGTTGTAGTTCTTaGAGAAGGACTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQSGCSS*RRTFHT
Trigger: AGTGTGGAAAGTCCTTCTCCAAGAACTACAACCTGA...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCGCAGACTTAACAGTGTaGCTCAGCAATGTCTCACAT +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFADLTV*LSNVSH
Trigger: ATGTGAGACATTGCTGAGCCACACTGTTAAGTCTGC...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTGCAGACTTAACAGTGTaGCTCAGCAATGTCTCACAT +
Preference number: 4 (lower is better)
Translates to: SNKPHLLEAALSILAQACADLTV*LSNVSH
Trigger: ATGTGAGACATTGCTGAGCCACACTGTTAAGTCTGC...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCGCAGACTTAACAGTGTaGCTCAGCAATGTCTCACAT +
Preference number: 4 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSADLTV*LSNVSH
Trigger: ATGTGAGACATTGCTGAGCCACACTGTTAAGTCTGC...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 4 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGAGAGGTTGCTGTGAGTaGAGATCATGCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRRGCCE*RSCHCT
Trigger: TGTGCAGTGGCATGATCTCCACTCACAGCAACCTCT...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCAGTACAGCACTGTGTaGACTCTCTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAQYSTV*TLSLYT
Trigger: GGTGTACAATGAGAGAGTCCACACAGTGCTGTACTG...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCAATCTCACACATTCTGTaGTGTGTGCAGTACAGCACT +
Preference number: 4 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSISHIL*CVQYST
Trigger: AGTGCTGTACTGCACACACCACAGAATGTGTGAGAT...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGGTTTTCATTAAGCGATaGGCTCAGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMVFIKR*AQSKDV
Trigger: AACATCTTTACTCTGAGCTCATCGCTTAATGAAAAC...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATGGTACGCACTCTCGATaGAAGTCTTGCCACATTCTT +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHGTHSR*KSCHIL
Trigger: AAGAATGTGGCAAGACTTTCATCGAGAGTGCGTACC...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTCAATGTCGAACAAGGGATaGGCTCTTTTGGAACATTTT +
Preference number: 4 (lower is better)
Translates to: VLSCLVQTESSPKTFLPSMSNKG*ALLEHF
Trigger: AAAATGTTCCAAAAGAGCTCATCCCTTGTTCGACAT...TGAGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCTGTGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTATTCCAATCATGTTCTaGATGCATTCACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ILWCVQYSTVWTLSLYTFIPIMF*MHSQVL
Trigger: GAGAACCTGTGAATGCATTCAGAACATGATTGGAAT...AAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGCAATCATGTTCTGAATaGATTCACAGGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQQSCSE*IHRFSL
Trigger: CAGAGAGAACCTGTGAATGCATTCAGAACATGATTG...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATAACCATCACCTAAACTaGACAAGCAGGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHNHHLN*TSRELP
Trigger: GGGAAGTTCCCTGCTTGTCCAGTTTAGGTGATGGTT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTCAGGTTGTAGTTCTTaGAGAAGGACTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFSGCSS*RRTFHT
Trigger: AGTGTGGAAAGTCCTTCTCCAAGAACTACAACCTGA...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TCACAGGTAATTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTCTGGACACTGATATaGGGTCTCCTTAGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SQVIYSPSLPSCNESSALFWTLI*GLLSVN
Trigger: ATTCACACTAAGGAGACCCCATATCAGTGTCCAGAA...TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTCTGGACACTGATATaGGGTCTCCTTAGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTFWTLI*GLLSVN
Trigger: ATTCACACTAAGGAGACCCCATATCAGTGTCCAGAA...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATTTCTGGACACTGATATaGGGTCTCCTTAGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNFWTLI*GLLSVN
Trigger: ATTCACACTAAGGAGACCCCATATCAGTGTCCAGAA...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATACCATTATGTTTCCATaGGTTGCTCTCCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHTIMFP*VALPGV
Trigger: CACACCTGGGAGAGCAACCCATGGAAACATAATGGT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTACTGGAAGACTCATGTaGCCCCCAACCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPTGRLM*PPTIMF
Trigger: AAACATAATGGTTGGGGGCCACATGAGTCTTCCAGT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCGTGTGTTGTCATGTCTaGTACAGACTGAATCATCCC +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAVCCHV*YRLNHP
Trigger: GGGATGATTCAGTCTGTACCAGACATGACAACACAC...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTATCTCACACATTCTGTaGTGTGTGCAGTACAGCACT +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPISHIL*CVQYST
Trigger: AGTGCTGTACTGCACACACCACAGAATGTGTGAGAT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
3UTR CAA 72 bp TGGTGTGTGCAGTACAGCACTGTGTGGACTCTCTCATaGTACACCTTTGTTGTTACAGAAAACACAGTAAGA +
Preference number: 4 (lower is better)
Translates to: WCVQYSTVWTLS*YTFVVTENTVR
Trigger: TCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp ATTCCAGTGTGTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTATGTCGAACAAGGGATaGGCTCTTTTGGAACATTTT +
Preference number: 4 (lower is better)
Translates to: IPVCVLSCLVQTESSPKTMSNKG*ALLEHF
Trigger: AAAATGTTCCAAAAGAGCTCATCCCTTGTTCGACAT...AGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACACACACTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATAGGATTCTTTTCTACTaGCCAGAGAGGAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHRILFY*PERSQI
Trigger: GATCTGACTCCTCTCTGGTCAGTAGAAAAGAATCCT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTATGTCTGGTACAGACTaGATCATCCCCAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPMSGTD*IIPKDF
Trigger: AAAGTCTTTGGGGATGATTCAGTCTGTACCAGACAT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTATGTCTGGTACAGACTaGATCATCCCCAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSMSGTD*IIPKDF
Trigger: AAAGTCTTTGGGGATGATTCAGTCTGTACCAGACAT...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATATTCCAATCATGTTCTaGATGCATTCACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: CLLTYKVETPYYRALHSNIPIMF*MHSQVL
Trigger: GAGAACCTGTGAATGCATTCAGAACATGATTGGAAT...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp CTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCATGGTTCACAGTGGCTaGATTAGAAGCATCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LKQQTTSVRSSPFHLSTSMVHSG*IRSILN
Trigger: ATTTAGGATGCTTCTAATTCAGCCACTGTGAACCAT...GCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCGAGCTTGCAATCAAATaGTCCCCAAAACCAGGATAT +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAELAIK*SPKPGY
Trigger: ATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTC...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTGAGCTTGCAATCAAATaGTCCCCAAAACCAGGATAT +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSELAIK*SPKPGY
Trigger: ATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTC...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TCACAGGTAATTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTACAATCATGTTCTGAATaGATTCACAGGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SQVIYSPSLPSCNESSALQSCSE*IHRFSL
Trigger: CAGAGAGAACCTGTGAATGCATTCAGAACATGATTG...TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TCACAGGTAATTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTAAGTCCTCAGCATTATTaGAGGAGTATAATGCAGACA +
Preference number: 4 (lower is better)
Translates to: SQVIYSPSLPSCNESSALSPQHY*RSIMQT
Trigger: TGTCTGCATTATACTCCTGCAATAATGCTGAGGACT...TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTAGTCCTCAGCATTATTaGAGGAGTATAATGCAGACA +
Preference number: 4 (lower is better)
Translates to: SNKPHLLEAALSILAQACSPQHY*RSIMQT
Trigger: TGTCTGCATTATACTCCTGCAATAATGCTGAGGACT...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGAGGCACACACTACTATaGCCAGATAATTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLRHTLL*PDNFLY
Trigger: ATACAGGAAATTATCTGGGCATAGTAGTGTGTGCCT...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCAGGCACACACTACTATaGCCAGATAATTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFRHTLL*PDNFLY
Trigger: ATACAGGAAATTATCTGGGCATAGTAGTGTGTGCCT...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCTCAGGTTGTAGTTCTTaGAGAAGGACTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRASGCSS*RRTFHT
Trigger: AGTGTGGAAAGTCCTTCTCCAAGAACTACAACCTGA...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TCACAGGTAATTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTAGTTTTCATTAAGCGATaGGCTCAGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: SQVIYSPSLPSCNESSALVFIKR*AQSKDV
Trigger: AACATCTTTACTCTGAGCTCATCGCTTAATGAAAAC...TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGGTTTTCATTAAGCGATaGGCTCAGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLVFIKR*AQSKDV
Trigger: AACATCTTTACTCTGAGCTCATCGCTTAATGAAAAC...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTATGTCGAACAAGGGATaGGCTCTTTTGGAACATTTT +
Preference number: 4 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPMSNKG*ALLEHF
Trigger: AAAATGTTCCAAAAGAGCTCATCCCTTGTTCGACAT...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCATGGTTCACAGTGGCTaGATTAGAAGCATCCTAAAT +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAMVHSG*IRSILN
Trigger: ATTTAGGATGCTTCTAATTCAGCCACTGTGAACCAT...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp AAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTTTCAGTCAATCATGTTCTGAATaGATTCACAGGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KPHLLEAALSILAQACFSQSCSE*IHRFSL
Trigger: CAGAGAGAACCTGTGAATGCATTCAGAACATGATTG...ACTGAAACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCAGTCCTCAGCATTATTaGAGGAGTATAATGCAGACA +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRASPQHY*RSIMQT
Trigger: TGTCTGCATTATACTCCTGCAATAATGCTGAGGACT...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCAGGCACACACTACTATaGCCAGATAATTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: VWTLSLYTFVVTENTVRARHTLL*PDNFLY
Trigger: ATACAGGAAATTATCTGGGCATAGTAGTGTGTGCCT...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATATTCCAATCATGTTCTaGATGCATTCACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHIPIMF*MHSQVL
Trigger: GAGAACCTGTGAATGCATTCAGAACATGATTGGAAT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGATGGTTCACAGTGGCTaGATTAGAAGCATCCTAAAT +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRMVHSG*IRSILN
Trigger: ATTTAGGATGCTTCTAATTCAGCCACTGTGAACCAT...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR GCA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATAGGATATTCACAAATTaGTTCCTGAGTCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHRIFTN*FLSPWF
Trigger: AAACCAGGGACTCAGGAAGCAATTTGTGAATATCCT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR TCA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGTTTTCATTAAGCGATaGGCTCAGAGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRVFIKR*AQSKDV
Trigger: AACATCTTTACTCTGAGCTCATCGCTTAATGAAAAC...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS CCA 90 bp GCCCGTGCACCCACGGCGGAGCCGAGGCCGCGACTCCGGGCCTGTTaGCTGGAACCCGCAGCCGTGTCTCGGGCCGCCCCGGTAGCGGCC +
Preference number: 5 (lower is better)
Translates to: ARAPTAEPRPRLRAC*LEPAAVSRAAPVAA
Trigger: GGCCGCTACCGGGGCGGCCCGAGACACGGCTGCGGGTTCCAGCCAACAGGCCCGGAGTCGCGGCCTCGGCTCCGCCGTGGGTGCACGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500161.2
ENST00000601887.1
CDS GCA 90 bp AGCCGCAGACGCGGAGCCCACAGGAGTCCCCGCAGCCCTAGCCCGTaGACCCACGGCGGAGCCGAGGCCGCGACTCCGGGCCTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SRRRGAHRSPRSPSP*THGGAEAATPGLLA
Trigger: AGCCAACAGGCCCGGAGTCGCGGCCTCGGCTCCGCCGTGGGTGCACGGGCTAGGGCTGCGGGGACTCCTGTGGGCTCCGCGTCTGCGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500161.2
ENST00000601887.1
CDS TCA 90 bp GACAGCAAGACCCTGGCCAGGTGTCCGGGGAACGGCTCGGGCGGCTaGCACCGCAGTCCGCGAGAGGCGAGGAGGATCCTTGGACTGTGG +
Preference number: 5 (lower is better)
Translates to: DSKTLARCPGNGSGG*HRSPREARRILGLW
Trigger: CCACAGTCCAAGGATCCTCCTCGCCTCTCGCGGACTGCGGTGTCAGCCGCCCGAGCCGTTCCCCGGACACCTGGCCAGGGTCTTGCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS GCA 90 bp CCTGAGAGCACTCGGCCCCGTTCTATCCCGCAGTGGTTTGGGGAGTaGAGGTCATCACTCCCACCCGCCAAGGCGGACGCCGGACCCTCC +
Preference number: 5 (lower is better)
Translates to: PESTRPRSIPQWFGE*RSSLPPAKADAGPS
Trigger: GGAGGGTCCGGCGTCCGCCTTGGCGGGTGGGAGTGATGACCTGCACTCCCCAAACCACTGCGGGATAGAACGGGGCCGAGTGCTCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS TCA 90 bp TCATATCCCAAACTGGCCAGGTGTCCGGGGAACGGCTCGGGCGGCTaGCACCGCAGTCCGCGAGAGGCGAGGAGGATCCTTGGACTGTGG +
Preference number: 5 (lower is better)
Translates to: SYPKLARCPGNGSGG*HRSPREARRILGLW
Trigger: CCACAGTCCAAGGATCCTCCTCGCCTCTCGCGGACTGCGGTGTCAGCCGCCCGAGCCGTTCCCCGGACACCTGGCCAGTTTGGGATATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601887.1
CDS-3UTR CAA 90 bp AGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGTGCGACTCCGGGCCTGTaGGCTGGAACCCGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: SNKPHLLEAALSILAQACATPGL*AGTRSR
Trigger: ACGGCTGCGGGTTCCAGCCAACAGGCCCGGAGTCGC...ACAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CAA 90 bp GGAGTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTGGAAGAGGCGAGGAGGATCCTaGGACTGTGGGCAGGATCGC +
Preference number: 5 (lower is better)
Translates to: GVRSKTRLLNTGVRVNWKRRGGS*DCGQDR
Trigger: GCGATCCTGCCCACAGTCCAAGGATCCTCCTCGCCT...CTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS-3UTR CAA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAGACAGCAAGACCGGTaGGCGGCCGGCGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQRQQDR*AAGGSH
Trigger: ATGGCTGCCGCCGGCCGCCAACCGGTCTTGCTGTCT...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597186.5
ENST00000598312.6
CDS CCA 90 bp GGGATGAGCTCTTTTGGAACATTTTTCCACACTGAGGACACCGGCTaGGACCCTCCCTGCTATGGAGTCTCTGATGTACTGCCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: GMSSFGTFFHTEDTG*DPPCYGVSDVLPGE
Trigger: CTCACCTGGCAGTACATCAGAGACTCCATAGCAGGGAGGGTCCCAGCCGGTGTCCTCAGTGTGGAAAAATGTTCCAAAAGAGCTCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACAGACAGCAAGACCGGTaGGCGGCCGGCGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHRQQDR*AAGGSH
Trigger: ATGGCTGCCGCCGGCCGCCAACCGGTCTTGCTGTCT...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597186.5
ENST00000598312.6
CDS CCA 90 bp CCTGGTTTCTCCAGAGTTAAAGCTGATTGCCTCAAGTGTCCCTCCTaGTTCTCACAGTCCCAACCATCACCTAAACTGGACAAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PGFSRVKADCLKCPS*FSQSQPSPKLDKQG
Trigger: TCCCTGCTTGTCCAGTTTAGGTGATGGTTGGGACTGTGAGAACCAGGAGGGACACTTGAGGCAATCAGCTTTAACTCTGGAGAAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS CCA 90 bp GTCAGATCTAAGACACGCCTCCTAAACACAGGAGTGAGAGTGAACTaGAAGACTCATGTGGCCCCCAACCATTATGTTTCCATGGGTTGC +
Preference number: 5 (lower is better)
Translates to: VRSKTRLLNTGVRVN*KTHVAPNHYVSMGC
Trigger: GCAACCCATGGAAACATAATGGTTGGGGGCCACATGAGTCTTCCAGTTCACTCTCACTCCTGTGTTTAGGAGGCGTGTCTTAGATCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTTTATGTTTCCATGGGTaGCTCTCCCAGGTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCLCFHG*LSQVCS
Trigger: AGAGCACACCTGGGAGAGCAACCCATGGAAACATAA...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGTTATGTTTCCATGGGTaGCTCTCCCAGGTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMLCFHG*LSQVCS
Trigger: AGAGCACACCTGGGAGAGCAACCCATGGAAACATAA...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp ACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTCATGGAAACCATTTGTaGCCAGAACTCTCTGAGACG +
Preference number: 5 (lower is better)
Translates to: TGSLCGVTPMFAHFIPVCHGNHL*PELSET
Trigger: CGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCATG...ACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AGTTGTCTCTGGAGTTCCCCAATGAGCAGACTTAACAGTGTGGCTCAGCAATGTACTTCCATGGAATGGTaGAAGCCTTTTCCACAGGCA +
Preference number: 5 (lower is better)
Translates to: SCLWSSPMSRLNSVAQQCTSMEW*KPFPQA
Trigger: TGCCTGTGGAAAAGGCTTCAACCATTCCATGGAAGT...ACATTGCTGAGCCACACTGTTAAGTCTGCTCATTGGGGAACTCCAGAGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPVSPPC*HISFQC
Trigger: ACACTGGAATGAAATGTGCAAACATGGGGGTGACAC...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS TCA 90 bp ACATTTGAGTCAGGTGCATGGAAACCATTTGTTGCCAGAACTCTCTaGGACGGTGGAAGGTCTGAGCTTGCAATCAAATGCTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: TFESGAWKPFVARTL*DGGRSELAIKCSPK
Trigger: TTTTGGGGAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCATGCACCTGACTCAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTTATGTTTCCATGGGTaGCTCTCCCAGGTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFLCFHG*LSQVCS
Trigger: AGAGCACACCTGGGAGAGCAACCCATGGAAACATAA...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACTTATGTTTCCATGGGTaGCTCTCCCAGGTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHLCFHG*LSQVCS
Trigger: AGAGCACACCTGGGAGAGCAACCCATGGAAACATAA...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGCCCTCATCCTAAGTaGTCTCTGGAGTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSCPHPK*SLEFPN
Trigger: ATTGGGGAACTCCAGAGACAACTTAGGATGAGGGCA...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCCAGTGTGTGTATTCCAGTGTGTGTGTaGTCATGTCTGGTACAGACT +
Preference number: 5 (lower is better)
Translates to: RFSLWCHPHVCTFHSSVCIPVCV*SCLVQT
Trigger: AGTCTGTACCAGACATGACAACACACACACTGGAAT...ACACACACTGGAATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATTCCAGTGTGTGTGTaGTCATGTCTGGTACAGACT +
Preference number: 5 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPIPVCV*SCLVQT
Trigger: AGTCTGTACCAGACATGACAACACACACACTGGAAT...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQVSPPC*HISFQC
Trigger: ACACTGGAATGAAATGTGCAAACATGGGGGTGACAC...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTCATGGAAACCATTTGTaGCCAGAACTCTCTGAGACG +
Preference number: 5 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFIHGNHL*PELSET
Trigger: CGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCATG...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATCTTAGCACAAGCTTGCATGGAAACCATTTGTaGCCAGAACTCTCTGAGACG +
Preference number: 5 (lower is better)
Translates to: KQQTTSVRSSPFHLSTSLHGNHL*PELSET
Trigger: CGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCATG...CAAGCTTGTGCTAAGATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp GTGTGTTGTCATGTCTGGTACAGACTGAATCATCCCCAAAGACTTTTCTGCCCTATTCCAGTGTGTGTGTaGTCATGTCTGGTACAGACT +
Preference number: 5 (lower is better)
Translates to: VCCHVWYRLNHPQRLFCPIPVCV*SCLVQT
Trigger: AGTCTGTACCAGACATGACAACACACACACTGGAAT...AGGGCAGAAAAGTCTTTGGGGATGATTCAGTCTGTACCAGACATGACAACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LRTRWKLPTTGLFIPIMFVSPPC*HISFQC
Trigger: ACACTGGAATGAAATGTGCAAACATGGGGGTGACAC...GAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TCACAGGTAATTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTAGTGTCACCCCCATGTTaGCACATTTCATTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: SQVIYSPSLPSCNESSALVSPPC*HISFQC
Trigger: ACACTGGAATGAAATGTGCAAACATGGGGGTGACAC...TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp CACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTATTGCAGGAGTATAATGGTGTGGACTCTCTCATaGTACACCTTTGTTGTTACA +
Preference number: 5 (lower is better)
Translates to: HLVCPPATSPQHYCRSIMVWTLS*YTFVVT
Trigger: TGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC...CATTATACTCCTGCAATAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp GTGTGCAGTACAGCACTGTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGGAGTCCTCAGCATTATaGCAGGAGTATAATGCAGAC +
Preference number: 5 (lower is better)
Translates to: VCSTALCGLSHCTPLLLQESSAL*QEYNAD
Trigger: GTCTGCATTATACTCCTGCAATAATGCTGAGGACTC...CTGTAACAACAAAGGTGTACAATGAGAGAGTCCACACAGTGCTGTACTGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TCTGGCCTGCTTGTTTCAGTCTTAAGAGGAACGACTTCATTGTTCATTCACAGGATTTATTCACCTAGTTaGCCCTCCTGCAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: SGLLVSVLRGTTSLFIHRIYSPS*PSCNES
Trigger: GGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAAT...CCTGTGAATGAACAATGAAGTCGTTCCTCTTAAGACTGAAACAAGCAGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCAATTTATTCACCTAGTTaGCCCTCCTGCAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSIYSPS*PSCNES
Trigger: GGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAAT...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS TCA 90 bp ATGGAAACCATTTGTTGCCAGAACTCTCTGAGACGGTGGAAGGTCTaGGCTTGCAATCAAATGCTCCCCAAAACCAGGATATTCACAAAT +
Preference number: 5 (lower is better)
Translates to: METICCQNSLRRWKV*ACNQMLPKTRIFTN
Trigger: ATTTGTGAATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCCCTCATGGAAACCATTTGTaGCCAGAACTCTCTGAGACG +
Preference number: 5 (lower is better)
Translates to: WTLSLYTFVVTENTVRAPHGNHL*PELSET
Trigger: CGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCATG...AGGGGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGTGCCCTCATCCTAAGTaGTCTCTGGAGTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRCPHPK*SLEFPN
Trigger: ATTGGGGAACTCCAGAGACAACTTAGGATGAGGGCA...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TCACAGGTAATTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTAATTCCAGTGTGTGTGTaGTCATGTCTGGTACAGACT +
Preference number: 5 (lower is better)
Translates to: SQVIYSPSLPSCNESSALIPVCV*SCLVQT
Trigger: AGTCTGTACCAGACATGACAACACACACACTGGAAT...TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp GGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATGTTCTGAATGCATTCACGAGTCCTCAGCATTATaGCAGGAGTATAATGCAGAC +
Preference number: 5 (lower is better)
Translates to: GNSLLQGSSFQSCSECIHESSAL*QEYNAD
Trigger: GTCTGCATTATACTCCTGCAATAATGCTGAGGACTC...GTGAATGCATTCAGAACATGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TCACAGGTAATTTATTCACCTAGTTTGCCCTCCTGCAACGAGTCCTCAGCATTAGAGTCCTCAGCATTATaGCAGGAGTATAATGCAGAC +
Preference number: 5 (lower is better)
Translates to: SQVIYSPSLPSCNESSALESSAL*QEYNAD
Trigger: GTCTGCATTATACTCCTGCAATAATGCTGAGGACTC...TAATGCTGAGGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAATTACCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp GTGTGGACTCTCTCATTGTACACCTTTGTTGTTACAGAAAACACAGTAAGAGCCATTTATTCACCTAGTTaGCCCTCCTGCAACGAGTCC +
Preference number: 5 (lower is better)
Translates to: VWTLSLYTFVVTENTVRAIYSPS*PSCNES
Trigger: GGACTCGTTGCAGGAGGGCAAACTAGGTGAATAAAT...GGCTCTTACTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp CATTCCAATCATGTTCTGAATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCTCTCATTGTACACCTTaGTTGTTACAGAAAACACAG +
Preference number: 5 (lower is better)
Translates to: HSNHVLNAFTGSLCGVTPSHCTP*LLQKTQ
Trigger: CTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGA...GGGGGTGACACCACAGAGAGAACCTGTGAATGCATTCAGAACATGATTGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATGTGTGGACTCTCTCATaGTACACCTTTGTTGTTACA +
Preference number: 5 (lower is better)
Translates to: CLLTYKVETPYYRALHSNVWTLS*YTFVVT
Trigger: TGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC...ATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AATGCATTCACAGGTTCTCTCTGTGGTGTCACCCCCATGTTTGCACATTTCATTTCTCATTGTACACCTTaGTTGTTACAGAAAACACAG +
Preference number: 5 (lower is better)
Translates to: NAFTGSLCGVTPMFAHFISHCTP*LLQKTQ
Trigger: CTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGA...AATGAAATGTGCAAACATGGGGGTGACACCACAGAGAGAACCTGTGAATGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGGCTCTTCATTCCAATCATCTCATTGTACACCTTaGTTGTTACAGAAAACACAG +
Preference number: 5 (lower is better)
Translates to: FAYVQGGNSLLQGSSFQSSHCTP*LLQKTQ
Trigger: CTGTGTTTTCTGTAACAACAAAGGTGTACAATGAGA...TGATTGGAATGAAGAGCCCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATGTGTGGACTCTCTCATaGTACACCTTTGTTGTTACA +
Preference number: 5 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHVWTLS*YTFVVT
Trigger: TGTAACAACAAAGGTGTACAATGAGAGAGTCCACAC...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358067.5
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp AAAAAGTTGATTCAGTGTTTGCTTACGTACAAGGTGGAAACTCCCTACTACAGGAAGTTGATTCAGTGTTaGCTTACGTACAAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: KKLIQCLLTYKVETPYYRKLIQC*LTYKVE
Trigger: TTCCACCTTGTACGTAAGCAAACACTGAATCAACTT...CCTGTAGTAGGGAGTTTCCACCTTGTACGTAAGCAAACACTGAATCAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS-3UTR CAA 90 bp TTGCTTCAACAACTAAAGCAACAAACCACATCTGTTAGAAGCAGCCCTTTCCATAAGTTGATTCAGTGTTaGCTTACGTACAAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LLQQLKQQTTSVRSSPFHKLIQC*LTYKVE
Trigger: TTCCACCTTGTACGTAAGCAAACACTGAATCAACTT...ATGGAAAGGGCTGCTTCTAACAGATGTGGTTTGTTGCTTTAGTTGTTGAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS GCA 72 bp CGCGGAGCCCACAGGAGTCCCCGCAGCCCTAGCCCGTaGACCCACGGCGGAGCCGAGGCCGCGACTCCGGGC +
Preference number: 6 (lower is better)
Translates to: RGAHRSPRSPSP*THGGAEAATPG
Trigger: GCCCGGAGTCGCGGCCTCGGCTCCGCCGTGGGTGCACGGGCTAGGGCTGCGGGGACTCCTGTGGGCTCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500161.2
ENST00000601887.1
CDS CCA 72 bp CCCACGGCGGAGCCGAGGCCGCGACTCCGGGCCTGTTaGCTGGAACCCGCAGCCGTGTCTCGGGCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: PTAEPRPRLRAC*LEPAAVSRAAP
Trigger: CGGGGCGGCCCGAGACACGGCTGCGGGTTCCAGCCAACAGGCCCGGAGTCGCGGCCTCGGCTCCGCCGTGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500161.2
ENST00000601887.1
CDS CAA 90 bp AGCCCGTGCACCCACGGCGGAGCCGAGGCCGCGACTCCGGGCCTGTaGGCTGGAACCCGCAGCCGTGTCTCGGGCCGCCCCGGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: SPCTHGGAEAATPGL*AGTRSRVSGRPGSG
Trigger: GCCGCTACCGGGGCGGCCCGAGACACGGCTGCGGGTTCCAGCCAACAGGCCCGGAGTCGCGGCCTCGGCTCCGCCGTGGGTGCACGGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500161.2
ENST00000601887.1
CDS TCA 72 bp ACCCTGGCCAGGTGTCCGGGGAACGGCTCGGGCGGCTaGCACCGCAGTCCGCGAGAGGCGAGGAGGATCCTT +
Preference number: 6 (lower is better)
Translates to: TLARCPGNGSGG*HRSPREARRIL
Trigger: AAGGATCCTCCTCGCCTCTCGCGGACTGCGGTGTCAGCCGCCCGAGCCGTTCCCCGGACACCTGGCCAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS CAA 72 bp GCTGACACCGCAGTCCGCGAGAGGCGAGGAGGATCCTaGGACTGTGGGCAGGATCGCAGGCAGCGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: ADTAVRERRGGS*DCGQDRRQRRP
Trigger: GGGCCTCCGCTGCCTGCGATCCTGCCCACAGTCCAAGGATCCTCCTCGCCTCTCGCGGACTGCGGTGTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500161.2
ENST00000601887.1
CDS TCA 72 bp AAACTGGCCAGGTGTCCGGGGAACGGCTCGGGCGGCTaGCACCGCAGTCCGCGAGAGGCGAGGAGGATCCTT +
Preference number: 6 (lower is better)
Translates to: KLARCPGNGSGG*HRSPREARRIL
Trigger: AAGGATCCTCCTCGCCTCTCGCGGACTGCGGTGTCAGCCGCCCGAGCCGTTCCCCGGACACCTGGCCAGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601887.1
CDS CCA 72 bp CTGACACCGCAGTCCGCGAGAGGCGAGGAGGATCCTTaGACTGTGGGCAGGATCGCAGGCAGCGGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: LTPQSARGEEDP*TVGRIAGSGGP
Trigger: AGGGCCTCCGCTGCCTGCGATCCTGCCCACAGTCCAAGGATCCTCCTCGCCTCTCGCGGACTGCGGTGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500161.2
ENST00000601887.1
CDS GCA 72 bp ACTCGGCCCCGTTCTATCCCGCAGTGGTTTGGGGAGTaGAGGTCATCACTCCCACCCGCCAAGGCGGACGCC +
Preference number: 6 (lower is better)
Translates to: TRPRSIPQWFGE*RSSLPPAKADA
Trigger: GGCGTCCGCCTTGGCGGGTGGGAGTGATGACCTGCACTCCCCAAACCACTGCGGGATAGAACGGGGCCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS CAA 72 bp CTGAGAGCACTCGGCCCCGTTCTATCCCGCAGTGGTTaGGGGAGTGCAGGTCATCACTCCCACCCGCCAAGG +
Preference number: 6 (lower is better)
Translates to: LRALGPVLSRSG*GSAGHHSHPPR
Trigger: CCTTGGCGGGTGGGAGTGATGACCTGCACTCCCCAAACCACTGCGGGATAGAACGGGGCCGAGTGCTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500161.2
CDS TCA 72 bp ACAAGGGATGAGCTCTTTTGGAACATTTTTCCACACTaGGGACACCGGCTGGGACCCTCCCTGCTATGGAGT +
Preference number: 6 (lower is better)
Translates to: TRDELFWNIFPH*GHRLGPSLLWS
Trigger: ACTCCATAGCAGGGAGGGTCCCAGCCGGTGTCCTCAGTGTGGAAAAATGTTCCAAAAGAGCTCATCCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS CCA 72 bp GGAAGACTCATGTGGCCCCCAACCATTATGTTTCCATaGGTTGCTCTCCCAGGTGTGCTCTTTGATGTCGAA +
Preference number: 6 (lower is better)
Translates to: GRLMWPPTIMFP*VALPGVLFDVE
Trigger: TTCGACATCAAAGAGCACACCTGGGAGAGCAACCCATGGAAACATAATGGTTGGGGGCCACATGAGTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS CCA 72 bp TCCAGAGTTAAAGCTGATTGCCTCAAGTGTCCCTCCTaGTTCTCACAGTCCCAACCATCACCTAAACTGGAC +
Preference number: 6 (lower is better)
Translates to: SRVKADCLKCPS*FSQSQPSPKLD
Trigger: GTCCAGTTTAGGTGATGGTTGGGACTGTGAGAACCAGGAGGGACACTTGAGGCAATCAGCTTTAACTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS TCA 72 bp TCAGGTGCATGGAAACCATTTGTTGCCAGAACTCTCTaGGACGGTGGAAGGTCTGAGCTTGCAATCAAATGC +
Preference number: 6 (lower is better)
Translates to: SGAWKPFVARTL*DGGRSELAIKC
Trigger: GCATTTGATTGCAAGCTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAACAAATGGTTTCCATGCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS CAA 72 bp TTGCCAGAACTCTCTGAGACGGTGGAAGGTCTGAGCTaGCAATCAAATGCTCCCCAAAACCAGGATATTCAC +
Preference number: 6 (lower is better)
Translates to: LPELSETVEGLS*QSNAPQNQDIH
Trigger: GTGAATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS TCA 72 bp ATTTGTTGCCAGAACTCTCTGAGACGGTGGAAGGTCTaGGCTTGCAATCAAATGCTCCCCAAAACCAGGATA +
Preference number: 6 (lower is better)
Translates to: ICCQNSLRRWKV*ACNQMLPKTRI
Trigger: TATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS CAA 90 bp CTGAGCTTGCAATCAAATGCTCCCCAAAACCAGGATATTCACAAATaGCTTCCTGAGTCCCTGGTTTCTCCAGAGTTAAAGCTGATTGCC +
Preference number: 6 (lower is better)
Translates to: LSLQSNAPQNQDIHK*LPESLVSPELKLIA
Trigger: GGCAATCAGCTTTAACTCTGGAGAAACCAGGGACTCAGGAAGCAATTTGTGAATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS TCA 72 bp CATCACCTAAACTGGACAAGCAGGGAACTTCCCTTGTaGATCTTTCCACTTCTACATCACAGGGTACTTCTC +
Preference number: 6 (lower is better)
Translates to: HHLNWTSRELPL*IFPLLHHRVLL
Trigger: GAGAAGTACCCTGTGATGTAGAAGTGGAAAGATTCACAAGGGAAGTTCCCTGCTTGTCCAGTTTAGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
ENST00000601887.1
CDS CAA 90 bp AACCATTTGTTGCCAGAACTCTCTGAGACGGTGGAAGGTCTGAGCTaGCAATCAAATGCTCCCCAAAACCAGGATATTCACAAATTGCTT +
Preference number: 6 (lower is better)
Translates to: NHLLPELSETVEGLS*QSNAPQNQDIHKLL
Trigger: AAGCAATTTGTGAATATCCTGGTTTTGGGGAGCATTTGATTGCAAGCTCAGACCTTCCACCGTCTCAGAGAGTTCTGGCAACAAATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6
CDS CAA 72 bp CAATCAAATGCTCCCCAAAACCAGGATATTCACAAATaGCTTCCTGAGTCCCTGGTTTCTCCAGAGTTAAAG +
Preference number: 6 (lower is better)
Translates to: QSNAPQNQDIHK*LPESLVSPELK
Trigger: CTTTAACTCTGGAGAAACCAGGGACTCAGGAAGCAATTTGTGAATATCCTGGTTTTGGGGAGCATTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358067.5
ENST00000500161.2
ENST00000597186.5
ENST00000598312.6