RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF326 (Homo sapiens)

Ensembl gene IDs: ENSG00000162664

Ensembl transcript IDs: ENST00000340281.9, ENST00000361911.9, ENST00000370447.3, ENST00000394583.7

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTATGGCTGTCTCCGAGGAGGCCTCAAATGGTGGCAGGACCTACTaGATTTACCATTGCCAAGAATCTGCCCTTCAGCCTTGCAGATTC +
Preference number: 1 (lower is better)
Translates to: SMAVSEEASNGGRTY*IYHCQESALQPCRF
Trigger: GAATCTGCAAGGCTGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAGGTCCTGCCACCATTTGAGGCCTCCTCGGAGACAGCCATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 90 bp ACTGATCTAATAAATAAGCTACCCATAGTACCCTTCCACACTCCATaGTATTTCATACTTCCCTGTCGCCAAGGGGGCCATCTGTCACCA +
Preference number: 1 (lower is better)
Translates to: TDLINKLPIVPFHTP*YFILPCRQGGHLSP
Trigger: TGGTGACAGATGGCCCCCTTGGCGACAGGGAAGTATGAAATAGCATGGAGTGTGGAAGGGTACTATGGGTAGCTTATTTATTAGATCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR TCA 90 bp TGCCAAGAATCTGCCCTTCAGCCTTGCAGATTCCCTGGATTTGTTTaGATACCAAATAGAGATACAGCACTGAGGGTAGGGACCATAACT +
Preference number: 1 (lower is better)
Translates to: CQESALQPCRFPGFV*IPNRDTALRVGTIT
Trigger: AGTTATGGTCCCTACCCTCAGTGCTGTATCTCTATTTGGTATTCAAACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGATTCTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 90 bp CTCAAATGGTGGCAGGACCTACTGAATTTACCATTGCCAAGAATCTaGCCTTCAGCCTTGCAGATTCCCTGGATTTGTTTGAATACCAAA +
Preference number: 1 (lower is better)
Translates to: LKWWQDLLNLPLPRI*PSALQIPWICLNTK
Trigger: TTTGGTATTCAAACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAGGTCCTGCCACCATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 90 bp TACCTAGGGCATTGCCACACTTCGATGGCCCCTATTTGTATGCTCTaGATTATATGCTCTGCACATATACTCTGTGAGTCTCACCTTATT +
Preference number: 1 (lower is better)
Translates to: YLGHCHTSMAPICML*IICSAHILCESHLI
Trigger: AATAAGGTGAGACTCACAGAGTATATGTGCAGAGCATATAATGCAGAGCATACAAATAGGGGCCATCGAAGTGTGGCAATGCCCTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 90 bp CATTGCCACACTTCGATGGCCCCTATTTGTATGCTCTGCATTATATaGTCTGCACATATACTCTGTGAGTCTCACCTTATTTGGCAAACA +
Preference number: 1 (lower is better)
Translates to: HCHTSMAPICMLCII*SAHILCESHLIWQT
Trigger: TGTTTGCCAAATAAGGTGAGACTCACAGAGTATATGTGCAGAGCATATAATGCAGAGCATACAAATAGGGGCCATCGAAGTGTGGCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CCA 90 bp GCTGTCTCTACAACTGGAGGTAATTCTTTAATTATCATCGGCATGTaGCTGTCAGTTCCTTGGCTCTCTTGGTTTCACCAAGATCTAATT +
Preference number: 1 (lower is better)
Translates to: AVSTTGGNSLIIIGM*LSVPWLSWFHQDLI
Trigger: AATTAGATCTTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCACATGCCGATGATAATTAAAGAATTACCTCCAGTTGTAGAGACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 90 bp TTAAGTGCTGCTGAACTGAACTATGTAAAGCAGGGATATAAACACTaGAAGCGCTGCAATGAACTGTCTCTACCTTCATCATGTGATCAT +
Preference number: 1 (lower is better)
Translates to: LSAAELNYVKQGYKH*KRCNELSLPSSCDH
Trigger: ATGATCACATGATGAAGGTAGAGACAGTTCATTGCAGCGCTTGCAGTGTTTATATCCCTGCTTTACATAGTTCAGTTCAGCAGCACTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR TCA 90 bp TTCAGCAGGAACCTTTGTGCCTCAAAAAGTAGACACCCCTTCTCCTaGAATATGGTCAACCTTAAAGCTTGTAGTTGTTTAAGTAGGTTT +
Preference number: 1 (lower is better)
Translates to: FSRNLCASKSRHPFS*NMVNLKACSCLSRF
Trigger: AAACCTACTTAAACAACTACAAGCTTTAAGGTTGACCATATTTCAGGAGAAGGGGTGTCTACTTTTTGAGGCACAAAGGTTCCTGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361911.9
3UTR CCA 90 bp GGAGGTAATTCTTTAATTATCATCGGCATGTGGCTGTCAGTTCCTTaGCTCTCTTGGTTTCACCAAGATCTAATTCCTTGTTTTGTATCT +
Preference number: 1 (lower is better)
Translates to: GGNSLIIIGMWLSVP*LSWFHQDLIPCFVS
Trigger: AGATACAAAACAAGGAATTAGATCTTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCACATGCCGATGATAATTAAAGAATTACCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CCA 90 bp TCATTTTTCTCTTTATTCCTCTTGCAGCAGCAACTGTCACATTGGTaGATTTGTTTTGATAGTCAACAACAATTCCGGGTCTATGAATGC +
Preference number: 1 (lower is better)
Translates to: SFFSLFLLQQQLSHW*ICFDSQQQFRVYEC
Trigger: GCATTCATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTTGCTGCTGCAAGAGGAATAAAGAGAAAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR TCA 90 bp CCCTATTTGTATGCTCTGCATTATATGCTCTGCACATATACTCTGTaGGTCTCACCTTATTTGGCAAACATCAAATTGTGTTACAGCTTT +
Preference number: 1 (lower is better)
Translates to: PYLYALHYMLCTYTL*VSPYLANIKLCYSF
Trigger: AAAGCTGTAACACAATTTGATGTTTGCCAAATAAGGTGAGACTCACAGAGTATATGTGCAGAGCATATAATGCAGAGCATACAAATAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CCA 90 bp TCTTTAATTATCATCGGCATGTGGCTGTCAGTTCCTTGGCTCTCTTaGTTTCACCAAGATCTAATTCCTTGTTTTGTATCTTCTAGAAAT +
Preference number: 1 (lower is better)
Translates to: SLIIIGMWLSVPWLS*FHQDLIPCFVSSRN
Trigger: ATTTCTAGAAGATACAAAACAAGGAATTAGATCTTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCACATGCCGATGATAATTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 90 bp CTCCGAGGAGGCCTCAAATGGTGGCAGGACCTACTGAATTTACCATaGCCAAGAATCTGCCCTTCAGCCTTGCAGATTCCCTGGATTTGT +
Preference number: 2 (lower is better)
Translates to: LRGGLKWWQDLLNLP*PRICPSALQIPWIC
Trigger: ACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAGGTCCTGCCACCATTTGAGGCCTCCTCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTTGAGCCCAGGAGGTTaGGGCTACACTGCACTCCAG +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPLSPGG*GYTALQ
Trigger: CTGGAGTGCAGTGTAGCCTCAACCTCCTGGGCTCAA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 90 bp GGAAACTCCTGCCTTGATAGGGGAAGAGTTACAGGCACCAGAAATTaGTATGAGGGCCCTATGAATGTCCTCAAAGTGCAATCACTGACC +
Preference number: 2 (lower is better)
Translates to: GNSCLDRGRVTGTRN*YEGPMNVLKVQSLT
Trigger: GGTCAGTGATTGCACTTTGAGGACATTCATAGGGCCCTCATACAAATTTCTGGTGCCTGTAACTCTTCCCCTATCAAGGCAGGAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGGCGGGACGACCGCTTaGGCCCAGGAGGTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKGGTTA*AQEVKA
Trigger: AGCTTTGACCTCCTGGGCTCAAGCGGTCGTCCCGCC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAGGTTGAGGCTACACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPRLRLH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTGTAGCCTCAACCT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGTGGTCCCAGCTACTTaGGAGGCTAAGGCGGGACGA +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKVVPAT*EAKAGR
Trigger: TCGTCCCGCCTTAGCCTCCCAAGTAGCTGGGACCAC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAATTGAGCCCAGGAGGTTaGGGCTACACTGCACTCCAG +
Preference number: 2 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLSPGG*GYTALQ
Trigger: CTGGAGTGCAGTGTAGCCTCAACCTCCTGGGCTCAA...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAGTTGGAGGATCGCTTaGGCCCAGGAGGTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKSWRIA*AQEVEA
Trigger: AGCCTCAACCTCCTGGGCTCAAGCGATCCTCCAACT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTGTAATTCTAGCACTTTaGGAAGCTGAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPVILAL*EAEVGG
Trigger: TCCTCCCACCTCAGCTTCCCAAAGTGCTAGAATTAC...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 90 bp GTGGGTGATTTGCTGAGGCTTATCTTCTCCATAGGTTTTGCTAGTTaGGGTTTCTTGATAAAGGTTCCACTGGGCTTATTAAATGGCTGC +
Preference number: 2 (lower is better)
Translates to: VGDLLRLIFSIGFAS*GFLIKVPLGLLNGC
Trigger: GCAGCCATTTAATAAGCCCAGTGGAACCTTTATCAAGAAACCCAAACTAGCAAAACCTATGGAGAAGATAAGCCTCAGCAAATCACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCACCAGAAATTTGTATaGGGGCCCTATGAATGTCCT +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPHQKFV*GPYECP
Trigger: AGGACATTCATAGGGCCCTCATACAAATTTCTGGTG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAGGTTGAGGCTACACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: TEHKILAQFISSRVSIQKRLRLH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTGTAGCCTCAACCT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 90 bp ATGAGGAATAAAGCTCCTTGTGGTAATCACAATATACCTAGGGCATaGCCACACTTCGATGGCCCCTATTTGTATGCTCTGCATTATATG +
Preference number: 2 (lower is better)
Translates to: MRNKAPCGNHNIPRA*PHFDGPYLYALHYM
Trigger: CATATAATGCAGAGCATACAAATAGGGGCCATCGAAGTGTGGCAATGCCCTAGGTATATTGTGATTACCACAAGGAGCTTTATTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGACAGACAGGTCACTTaGGCCCAGGAGTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVDRQVT*AQEFKT
Trigger: GGTTTTGAACTCCTGGGCTCAAGTGACCTGTCTGTC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGACAGACAGGTCACTTaGGCCCAGGAGTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKDRQVT*AQEFKT
Trigger: GGTTTTGAACTCCTGGGCTCAAGTGACCTGTCTGTC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTGAAATTATCATGACTTaGACTGGGTTGGTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPEIIMT*TGLVAV
Trigger: CACTGCAACCAACCCAGTTCAAGTCATGATAATTTC...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp GCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTTCTGCAAGCGCTGCAATaGACTGTCTCTACCTTCATC +
Preference number: 2 (lower is better)
Translates to: AFTIGLFKMLVAVKTLSLLQALQ*TVSTFI
Trigger: GATGAAGGTAGAGACAGTTCATTGCAGCGCTTGCAG...AAGAGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR CAA 90 bp CAAAGTGCAATCACTGACCACTACCTTCAAAATCATGTGAGATATTaGTTAAAAATATATCACCTCCAGGATAGGCGTGGTGGCTCATGC +
Preference number: 2 (lower is better)
Translates to: QSAITDHYLQNHVRY*LKIYHLQDRRGGSC
Trigger: GCATGAGCCACCACGCCTATCCTGGAGGTGATATATTTTTAACAAATATCTCACATGATTTTGAAGGTAGTGGTCAGTGATTGCACTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAAATTGATGCACACTTaGATATTCACTCCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPKLMHT*IFTPKS
Trigger: GCTCTTGGGAGTGAATATTCAAGTGTGCATCAATTT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGGCACAAGAATCGCTTaGACCCAGGAAGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKGTRIA*TQEAEI
Trigger: AATCTCTGCTTCCTGGGTTCAAGCGATTCTTGTGCC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGAGCCTAGAGCACAAGTaGTTTGGTGTAAGTAGTACC +
Preference number: 2 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMSLEHK*FGVSST
Trigger: GGTACTACTTACACCAAAGCACTTGTGCTCTAGGCT...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
3UTR-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAATTAGCTGGGCATGGTaGCTCACACTTAACAGTCCC +
Preference number: 2 (lower is better)
Translates to: TEHKILAQFISSRVSIQKISWAW*LTLNSP
Trigger: GGGACTGTTAAGTGTGAGCCACCATGCCCAGCTAAT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAATTAGCTGGGCATGGTaGCTCACACTTAACAGTCCC +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKISWAW*LTLNSP
Trigger: GGGACTGTTAAGTGTGAGCCACCATGCCCAGCTAAT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGAGACACCCCTTCTCCTaGAATATGGTCAACCTTAAA +
Preference number: 2 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMRHPFS*NMVNLK
Trigger: TTTAAGGTTGACCATATTTCAGGAGAAGGGGTGTCT...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361911.9
3UTR-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTGACTATAAAGTAAACTaGCCGCCTACAAATTATCCA +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPDYKVN*PPTNYP
Trigger: TGGATAATTTGTAGGCGGGCAGTTTACTTTATAGTC...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATCTGCCCTTCAGCCTTaGAGATTCCCTGGATTTGTT +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKSALQP*RFPGFV
Trigger: AACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACCATTGCCAAGAATCTaGCCTTCAGCCTTGCAGATT +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKPLPRI*PSALQI
Trigger: AATCTGCAAGGCTGAAGGGCAGATTCTTGGCAATGG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGGAGGCCTCAAATGGTaGCAGGACCTACTGAATTTA +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKGGLKW*QDLLNL
Trigger: TAAATTCAGTAGGTCCTGCCACCATTTGAGGCCTCC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATGGCTGTCAGTTCCTTaGCTCTCTTGGTTTCACCAA +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKWLSVP*LSWFHQ
Trigger: TTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 90 bp TTCATCCTCCTCATCTCCTTCTATTTGCTGATCCTGAGAATGGTCTaGAATTTCAAAAGGATTCTCACCCTTAACAAAACGTTCATATCG +
Preference number: 2 (lower is better)
Translates to: FILLISFYLLILRMV*NFKRILTLNKTFIS
Trigger: CGATATGAACGTTTTGTTAAGGGTGAGAATCCTTTTGAAATTCAAGACCATTCTCAGGATCAGCAAATAGAAGGAGATGAGGAGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACCCTTCCACACTCCATaGTATTTCATACTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKPFHTP*YFILPC
Trigger: ACAGGGAAGTATGAAATAGCATGGAGTGTGGAAGGG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTACCCTTCTCTTATTTaGCACCAAATCCCTAAAATT +
Preference number: 2 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPYPSLI*HQIPKI
Trigger: AATTTTAGGGATTTGGTGCCAAATAAGAGAAGGGTA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATATCATGACTTGAACTaGGTTGGTTGCAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEYHDLN*VGCSGG
Trigger: ACCTCCACTGCAACCAACCCAGTTCAAGTCATGATA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGAAATTATCATGACTTaGACTGGGTTGGTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKEIIMT*TGLVAV
Trigger: CACTGCAACCAACCCAGTTCAAGTCATGATAATTTC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp CGCGCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTAATATGTGGAATGCATaGAACATGGGTGTTAATTCA +
Preference number: 2 (lower is better)
Translates to: RAFTIGLFKMLVAVKTLSNMWNA*NMGVNS
Trigger: TGAATTAACACCCATGTTGCATGCATTCCACATATT...AGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGCGCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR CCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGCCTTCTCCTGAAATATaGTCAACCTTAAAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMPSPEI*STLKLV
Trigger: TACAAGCTTTAAGGTTGACCATATTTCAGGAGAAGG...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
3UTR-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAAATTGATGCACACTTaGATATTCACTCCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: TEHKILAQFISSRVSIQKKLMHT*IFTPKS
Trigger: GCTCTTGGGAGTGAATATTCAAGTGTGCATCAATTT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
3UTR-3UTR TCA 90 bp TTCTCACCCTTAACAAAACGTTCATATCGCGCCTTCACTATTGGATTATTTAAATCTACCTTCATCATGTaGTCATCTACAGTAACACCT +
Preference number: 2 (lower is better)
Translates to: FSPLTKRSYRAFTIGLFKSTFIM*SSTVTP
Trigger: AGGTGTTACTGTAGATGATCACATGATGAAGGTAGA...TTTAAATAATCCAATAGTGAAGGCGCGATATGAACGTTTTGTTAAGGGTGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGAAAAGTCTGCTTCTTaGTTCTTCAGCCAAAAACAG +
Preference number: 2 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVEKSAS*FFSQKQ
Trigger: CTGTTTTTGGCTGAAGAACCAAGAAGCAGACTTTTC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGCCTTGCAGATTCCCTaGATTTGTTTGAATACCAAA +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKALQIP*ICLNTK
Trigger: TTTGGTATTCAAACAAATCCAGGGAATCTGCAAGGC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAACTTGTGTAGAAAACTaGATCTATCATGGTAAGGGT +
Preference number: 2 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWETCVEN*IYHGKG
Trigger: ACCCTTACCATGATAGATTCAGTTTTCTACACAAGT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAGAGCACAAAATACTTaGCCAGTTTATATCTTCCAG +
Preference number: 2 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVRAQNT*PVYIFQ
Trigger: CTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
3UTR-3UTR GCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAGAGCACAAAATACTTaGCCAGTTTATATCTTCCAG +
Preference number: 2 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWERAQNT*PVYIFQ
Trigger: CTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGACTATAAAGTAAACTaGCCGCCTACAAATTATCCA +
Preference number: 2 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEDYKVN*PPTNYP
Trigger: TGGATAATTTGTAGGCGGGCAGTTTACTTTATAGTC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAATATGTGGAATGCATaGAACATGGGTGTTAATTCA +
Preference number: 2 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWENMWNA*NMGVNS
Trigger: TGAATTAACACCCATGTTGCATGCATTCCACATATT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAATATGTGGAATGCATaGAACATGGGTGTTAATTCA +
Preference number: 2 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVNMWNA*NMGVNS
Trigger: TGAATTAACACCCATGTTGCATGCATTCCACATATT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
3UTR-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGACTTGAATCAAGCATaGCATTTTAATCTAACTCTC +
Preference number: 2 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKDLNQA*HFNLTL
Trigger: GAGAGTTAGATTAAAATGGCATGCTTGATTCAAGTC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATACCCTTCTCTTATTTaGCACCAAATCCCTAAAATT +
Preference number: 2 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEYPSLI*HQIPKI
Trigger: AATTTTAGGGATTTGGTGCCAAATAAGAGAAGGGTA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR TCA 72 bp GTCTCCGAGGAGGCCTCAAATGGTGGCAGGACCTACTaGATTTACCATTGCCAAGAATCTGCCCTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: VSEEASNGGRTY*IYHCQESALQP
Trigger: AGGCTGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAGGTCCTGCCACCATTTGAGGCCTCCTCGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAGGCGGGACGACCGCTaGAGCCCAGGAGGTCAAAGC +
Preference number: 3 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPRRDDR*SPGGQS
Trigger: GCTTTGACCTCCTGGGCTCAAGCGGTCGTCCCGCCT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCTTGAGCCCAGGAGGTaGAGGCTACACTGCACTCCA +
Preference number: 3 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPLEPRR*RLHCTP
Trigger: TGGAGTGCAGTGTAGCCTCAACCTCCTGGGCTCAAG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CCA 72 bp AGAAGAAGGGAAAGTCAAGAAGAGATTAGACTAGTATaGCTGTCTCCGAGGAGGCCTCAAATGGTGGCAGGA +
Preference number: 3 (lower is better)
Translates to: RRRESQEEIRLV*LSPRRPQMVAG
Trigger: TCCTGCCACCATTTGAGGCCTCCTCGGAGACAGCCATACTAGTCTAATCTCTTCTTGACTTTCCCTTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTACTTGGGAGGCTAAGTaGGAGGATCGCTTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPTWEAK*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCAACTTAGCCTCCCAAGT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAGGCGGGACGACCGCTaGAGCCCAGGAGGTCAAAGC +
Preference number: 3 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWERRDDR*SPGGQS
Trigger: GCTTTGACCTCCTGGGCTCAAGCGGTCGTCCCGCCT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR TCA 72 bp TCTGCCCTTCAGCCTTGCAGATTCCCTGGATTTGTTTaGATACCAAATAGAGATACAGCACTGAGGGTAGGG +
Preference number: 3 (lower is better)
Translates to: SALQPCRFPGFV*IPNRDTALRVG
Trigger: CCCTACCCTCAGTGCTGTATCTCTATTTGGTATTCAAACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 72 bp TGGCAGGACCTACTGAATTTACCATTGCCAAGAATCTaGCCTTCAGCCTTGCAGATTCCCTGGATTTGTTTG +
Preference number: 3 (lower is better)
Translates to: WQDLLNLPLPRI*PSALQIPWICL
Trigger: CAAACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAGGTCCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 72 bp ATAAATAAGCTACCCATAGTACCCTTCCACACTCCATaGTATTTCATACTTCCCTGTCGCCAAGGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: INKLPIVPFHTP*YFILPCRQGGH
Trigger: ATGGCCCCCTTGGCGACAGGGAAGTATGAAATAGCATGGAGTGTGGAAGGGTACTATGGGTAGCTTATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 72 bp AAGCTCCTTGTGGTAATCACAATATACCTAGGGCATTaGCACACTTCGATGGCCCCTATTTGTATGCTCTGC +
Preference number: 3 (lower is better)
Translates to: KLLVVITIYLGH*HTSMAPICMLC
Trigger: GCAGAGCATACAAATAGGGGCCATCGAAGTGTGGCAATGCCCTAGGTATATTGTGATTACCACAAGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp CTTTGTTTCTCTCGCCGAGCCTCAATTCGCCGCTTTTCTTCCTCTTCATTTTTAGTTTTTGTGGGTGATTaGCTGAGGCTTATCTTCTCC +
Preference number: 3 (lower is better)
Translates to: LCFSRRASIRRFSSSSFLVFVGD*LRLIFS
Trigger: GGAGAAGATAAGCCTCAGCAAATCACCCACAAAAAC...TAAAAATGAAGAGGAAGAAAAGCGGCGAATTGAGGCTCGGCGAGAGAAACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR GCA 72 bp CATTGCCACACTTCGATGGCCCCTATTTGTATGCTCTaGATTATATGCTCTGCACATATACTCTGTGAGTCT +
Preference number: 3 (lower is better)
Translates to: HCHTSMAPICML*IICSAHILCES
Trigger: AGACTCACAGAGTATATGTGCAGAGCATATAATGCAGAGCATACAAATAGGGGCCATCGAAGTGTGGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAACTTGGGAGGCTAAGTaGGAGGATCGCTTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: TEHKILAQFISSRVSIQKTWEAK*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCAACTTAGCCTCCCAAGT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR GCA 72 bp GCTGAACTGAACTATGTAAAGCAGGGATATAAACACTaGAAGCGCTGCAATGAACTGTCTCTACCTTCATCA +
Preference number: 3 (lower is better)
Translates to: AELNYVKQGYKH*KRCNELSLPSS
Trigger: TGATGAAGGTAGAGACAGTTCATTGCAGCGCTTGCAGTGTTTATATCCCTGCTTTACATAGTTCAGTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR CCA 72 bp ACAACTGGAGGTAATTCTTTAATTATCATCGGCATGTaGCTGTCAGTTCCTTGGCTCTCTTGGTTTCACCAA +
Preference number: 3 (lower is better)
Translates to: TTGGNSLIIIGM*LSVPWLSWFHQ
Trigger: TTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCACATGCCGATGATAATTAAAGAATTACCTCCAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGCGGAAACTCCTGCCTaGATAGGGGAAGAGTTACAG +
Preference number: 3 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKAETPA*IGEELQ
Trigger: CTGTAACTCTTCCCCTATCAAGGCAGGAGTTTCCGC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGCGGAAACTCCTGCCTaGATAGGGGAAGAGTTACAG +
Preference number: 3 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEAETPA*IGEELQ
Trigger: CTGTAACTCTTCCCCTATCAAGGCAGGAGTTTCCGC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAATATACCTAGGGCATaGCCACACTTCGATGGCCCC +
Preference number: 3 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKNIPRA*PHFDGP
Trigger: GGGGCCATCGAAGTGTGGCAATGCCCTAGGTATATT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR TCA 72 bp CACTCCAACGAACAGATGACAAGTCTGAGACCAATGTaGTTCTTTTCCCCTTATAGGTACACTGTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: HSNEQMTSLRPM*FFSPYRYTVSL
Trigger: AAGAGAAACAGTGTACCTATAAGGGGAAAAGAATCACATTGGTCTCAGACTTGTCATCTGTTCGTTGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CCA 72 bp TCTTTATTCCTCTTGCAGCAGCAACTGTCACATTGGTaGATTTGTTTTGATAGTCAACAACAATTCCGGGTC +
Preference number: 3 (lower is better)
Translates to: SLFLLQQQLSHW*ICFDSQQQFRV
Trigger: GACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTTGCTGCTGCAAGAGGAATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAGGCACAAGAATCGCTaGAACCCAGGAAGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKRHKNR*NPGSRD
Trigger: ATCTCTGCTTCCTGGGTTCAAGCGATTCTTGTGCCT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp GCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTTGCTAGTTTGGGTTTCTaGATAAAGGTTCCACTGGGC +
Preference number: 3 (lower is better)
Translates to: AFTIGLFKMLVAVKTLSLASLGF*IKVPLG
Trigger: GCCCAGTGGAACCTTTATCAAGAAACCCAAACTAGC...AAGAGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAAAATTGATGCACACTaGAATATTCACTCCCAAGAG +
Preference number: 3 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPKIDAH*NIHSQE
Trigger: CTCTTGGGAGTGAATATTCAAGTGTGCATCAATTTT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACTAGTAAAATCTAGGTaGGTACCCCCAAATCCTCGT +
Preference number: 3 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWELVKSR*VPPNPR
Trigger: ACGAGGATTTGGGGGTACCAACCTAGATTTTACTAG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAACAGGCACCAGAAATTaGTATGAGGGCCCTATGAAT +
Preference number: 3 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWETGTRN*YEGPMN
Trigger: ATTCATAGGGCCCTCATACAAATTTCTGGTGCCTGT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR TCA 72 bp AACCTTTGTGCCTCAAAAAGTAGACACCCCTTCTCCTaGAATATGGTCAACCTTAAAGCTTGTAGTTGTTTA +
Preference number: 3 (lower is better)
Translates to: NLCASKSRHPFS*NMVNLKACSCL
Trigger: TAAACAACTACAAGCTTTAAGGTTGACCATATTTCAGGAGAAGGGGTGTCTACTTTTTGAGGCACAAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361911.9
3UTR-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACTACTGAATTTACCATaGCCAAGAATCTGCCCTTCA +
Preference number: 3 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKLLNLP*PRICPS
Trigger: TGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTCTCTTTATTCCTCTaGCAGCAGCAACTGTCACAT +
Preference number: 3 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVFSLFL*QQQLSH
Trigger: ATGTGACAGTTGCTGCTGCAAGAGGAATAAAGAGAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACAGAGCACAAAATACTaGCCCAGTTTATATCTTCCA +
Preference number: 3 (lower is better)
Translates to: TEHKILAQFISSRVSIQKQSTKY*PSLYLP
Trigger: TGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
3UTR-3UTR CAA 90 bp TTCTCACCCTTAACAAAACGTTCATATCGCGCCTTCACTATTGGATTATTTAAACAGAGCACAAAATACTaGCCCAGTTTATATCTTCCA +
Preference number: 3 (lower is better)
Translates to: FSPLTKRSYRAFTIGLFKQSTKY*PSLYLP
Trigger: TGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTG...TTTAAATAATCCAATAGTGAAGGCGCGATATGAACGTTTTGTTAAGGGTGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
3UTR-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGCAGATTCCCTGGATTaGTTTGAATACCAAATAGAG +
Preference number: 3 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKADSLD*FEYQIE
Trigger: CTCTATTTGGTATTCAAACAAATCCAGGGAATCTGC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAAAATTGATGCACACTaGAATATTCACTCCCAAGAG +
Preference number: 3 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVKIDAH*NIHSQE
Trigger: CTCTTGGGAGTGAATATTCAAGTGTGCATCAATTTT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
3UTR-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAAAATTGATGCACACTaGAATATTCACTCCCAAGAG +
Preference number: 3 (lower is better)
Translates to: TEHKILAQFISSRVSIQKKIDAH*NIHSQE
Trigger: CTCTTGGGAGTGAATATTCAAGTGTGCATCAATTTT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
3UTR TCA 72 bp GAAGTATCTTCAGCTCAAAATTCTAGCTCAGTAATTTaGTTCTCAGCCATGTTTATTCAACTAATCAGCCTA +
Preference number: 3 (lower is better)
Translates to: EVSSAQNSSSVI*FSAMFIQLISL
Trigger: TAGGCTGATTAGTTGAATAAACATGGCTGAGAATCAAATTACTGAGCTAGAATTTTGAGCTGAAGATACTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGTTGGCGGCGCTAGGCTaGGCTATGGCCGGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMLAALG*AMAGGE
Trigger: CTCGCCGCCGGCCATAGCTCAGCCTAGCGCCGCCAA...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTGGCGGCGCTAGGCTaGGCTATGGCCGGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVLAALG*AMAGGE
Trigger: CTCGCCGCCGGCCATAGCTCAGCCTAGCGCCGCCAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTGGCGGCGCTAGGCTaGGCTATGGCCGGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKLAALG*AMAGGE
Trigger: CTCGCCGCCGGCCATAGCTCAGCCTAGCGCCGCCAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TTCTCACCCTTAACAAAACGTTCATATCGCGCCTTCACTATTGGATTATTTAAATTGGCGGCGCTAGGCTaGGCTATGGCCGGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: FSPLTKRSYRAFTIGLFKLAALG*AMAGGE
Trigger: CTCGCCGCCGGCCATAGCTCAGCCTAGCGCCGCCAA...TTTAAATAATCCAATAGTGAAGGCGCGATATGAACGTTTTGTTAAGGGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGTCCATGGCAGAGGCTaGGGGCCGTCGGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKVHGRG*GPSALA
Trigger: CGCCAAGGCCGACGGCCCTCAGCCTCTGCCATGGAC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCTCGGCCTCGGCCTCTaGCTGTTGATGGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPLGLGL*LLMVLQ
Trigger: TTGGAGGACCATCAACAGGCAGAGGCCGAGGCCGAG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAGTTGGAGGATCGCTTaGGCCCAGGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPSWRIA*AQEVEA
Trigger: AGCCTCAACCTCCTGGGCTCAAGCGATCCTCCAACT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGCGTCCTCGAAGTCCATaGCAGAGGCTGAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMRPRSP*QRLRAV
Trigger: GACGGCCCTCAGCCTCTGCCATGGACTTCGAGGACG...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGGCGGGACGACCGCTTaGGCCCAGGAGGTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVGGTTA*AQEVKA
Trigger: AGCTTTGACCTCCTGGGCTCAAGCGGTCGTCCCGCC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCCACCACCACCACTGTaGTTGTCCATGCCATATGAC +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPPPPPL*LSMPYD
Trigger: GTCATATGGCATGGACAATCACAGTGGTGGTGGTGG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACGTCCTCGAAGTCCATaGCAGAGGCTGAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKRPRSP*QRLRAV
Trigger: GACGGCCCTCAGCCTCTGCCATGGACTTCGAGGACG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACGTCCTCGAAGTCCATaGCAGAGGCTGAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVRPRSP*QRLRAV
Trigger: GACGGCCCTCAGCCTCTGCCATGGACTTCGAGGACG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAAGCAGAGATTGCAGTaGGCTGAGATAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPKQRLQ*AEIVPL
Trigger: CAGTGGCACTATCTCAGCTCACTGCAATCTCTGCTT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACTCGGCCTCGGCCTCTaGCTGTTGATGGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKLGLGL*LLMVLQ
Trigger: TTGGAGGACCATCAACAGGCAGAGGCCGAGGCCGAG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTATATACCTAGGGCATTaGCACACTTCGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPIYLGH*HTSMAP
Trigger: AGGGGCCATCGAAGTGTGGCAATGCCCTAGGTATAT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTATTAGCTGGGCATGGTaGCTCACACTTAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPISWAW*LTLNSP
Trigger: GGGACTGTTAAGTGTGAGCCACCATGCCCAGCTAAT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGTGGTCCCAGCTACTTaGGAGGCTAAGGCGGGACGA +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEVVPAT*EAKAGR
Trigger: TCGTCCCGCCTTAGCCTCCCAAGTAGCTGGGACCAC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGTGGTCCCAGCTACTTaGGAGGCTAAGGCGGGACGA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKVVPAT*EAKAGR
Trigger: TCGTCCCGCCTTAGCCTCCCAAGTAGCTGGGACCAC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 72 bp AAAGCTCCTTGTGGTAATCACAATATACCTAGGGCATaGCCACACTTCGATGGCCCCTATTTGTATGCTCTG +
Preference number: 4 (lower is better)
Translates to: KAPCGNHNIPRA*PHFDGPYLYAL
Trigger: CAGAGCATACAAATAGGGGCCATCGAAGTGTGGCAATGCCCTAGGTATATTGTGATTACCACAAGGAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGCCACCACCACCACTGTaGTTGTCCATGCCATATGAC +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMPPPPL*LSMPYD
Trigger: GTCATATGGCATGGACAATCACAGTGGTGGTGGTGG...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR TCA 90 bp CGCGCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTGCAAGCGCTGCAATaGACTGTCTCTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: RAFTIGLFKMLVAVKTLSLQALQ*TVSTFI
Trigger: GATGAAGGTAGAGACAGTTCATTGCAGCGCTTGCAG...AGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGCGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTGAGCCCAGGAGGTTaGGGCTACACTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVLSPGG*GYTALQ
Trigger: CTGGAGTGCAGTGTAGCCTCAACCTCCTGGGCTCAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAGTTGGAGGATCGCTTaGGCCCAGGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWESWRIA*AQEVEA
Trigger: AGCCTCAACCTCCTGGGCTCAAGCGATCCTCCAACT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTCTGCCCTTCAGCCTTaGAGATTCCCTGGATTTGTT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPSALQP*RFPGFV
Trigger: AACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCCATTGCCAAGAATCTaGCCTTCAGCCTTGCAGATT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPPLPRI*PSALQI
Trigger: AATCTGCAAGGCTGAAGGGCAGATTCTTGGCAATGG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATCGGCCTCTGCCTGTTaGTGGTCCTCCAAAAGCATC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVSASAC*WSSKSI
Trigger: GATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATCGGCCTCTGCCTGTTaGTGGTCCTCCAAAAGCATC +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKSASAC*WSSKSI
Trigger: GATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACATAAGGTCCAAACCTaGTACCCCCACCACCACCAC +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKHKVQT*YPHHHH
Trigger: GTGGTGGTGGTGGGGGTAGCAGGTTTGGACCTTATG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAGGTTGAGGCTACACTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVRLRLH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTGTAGCCTCAACCT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAGACTAGAACATTCCTaGCTGGACGGTTACTCCATT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPRLEHS*LDGYSI
Trigger: AATGGAGTAACCGTCCAGGCAGGAATGTTCTAGTCT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCCCTTCCACACTCCATaGTATTTCATACTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPPFHTP*YFILPC
Trigger: ACAGGGAAGTATGAAATAGCATGGAGTGTGGAAGGG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACAGCTAGACCCGCCCTaGTTTCTACCTCCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKQLDPP*FLPPKE
Trigger: CTCTTTCGGAGGTAGAAACCAGGGCGGGTCTAGCTG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTATCATGACTTGAACTaGGTTGGTTGCAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPYHDLN*VGCSGG
Trigger: ACCTCCACTGCAACCAACCCAGTTCAAGTCATGATA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTATTGCCACACTTCGATaGCCCCTATTTGTATGCTCT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPIATLR*PLFVCS
Trigger: AGAGCATACAAATAGGGGCCATCGAAGTGTGGCAAT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 72 bp CCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTaGATAGGGGAAGAGTTACAGGCACCAGAAATTTGT +
Preference number: 4 (lower is better)
Translates to: PMFIFKRAETPA*IGEELQAPEIC
Trigger: ACAAATTTCTGGTGCCTGTAACTCTTCCCCTATCAAGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 72 bp TATCATCGGCATGTGGCTGTCAGTTCCTTGGCTCTCTaGGTTTCACCAAGATCTAATTCCTTGTTTTGTATC +
Preference number: 4 (lower is better)
Translates to: YHRHVAVSSLAL*VSPRSNSLFCI
Trigger: GATACAAAACAAGGAATTAGATCTTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCACATGCCGATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACCACCACCACCACTGTaGTTGTCCATGCCATATGAC +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEPPPPL*LSMPYD
Trigger: GTCATATGGCATGGACAATCACAGTGGTGGTGGTGG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGTGGACCAGCAGCTCTaGGTCAGAGACCAGAATAAC +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKVDQQL*VRDQNN
Trigger: GTTATTCTGGTCTCTGACTCAGAGCTGCTGGTCCAC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGTGGACCAGCAGCTCTaGGTCAGAGACCAGAATAAC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVVDQQL*VRDQNN
Trigger: GTTATTCTGGTCTCTGACTCAGAGCTGCTGGTCCAC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTTGTCTACTTGCAAATaGGAGCCTAGGAGTCAACAA +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPLSTCK*EPRSQQ
Trigger: TTGTTGACTCCTAGGCTCTCATTTGCAAGTAGACAA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp CGCGCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCCTGATAAGTATTCCTaGAGGCGGAGTGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: RAFTIGLFKMLVAVKTLSPDKYS*RRSVCN
Trigger: ATTACACACACTCCGCCTGCAGGAATACTTATCAGG...AGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGCGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCACTGTGATTGTCCATaGCATATGACTGGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPHCDCP*HMTGLG
Trigger: ACCTAAACCAGTCATATGGCATGGACAATCACAGTG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACTGAGGTGGGAGGACTaGTTGTGTCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLRWED*LCPGVQ
Trigger: TTGAACTCCTGGACACAAGCAGTCCTCCCACCTCAG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACTGAGGTGGGAGGACTaGTTGTGTCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKLRWED*LCPGVQ
Trigger: TTGAACTCCTGGACACAAGCAGTCCTCCCACCTCAG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGATTAAGCAATTTACCTaGTACCCCCACCACCACCAC +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMIKQFT*YPHHHH
Trigger: GTGGTGGTGGTGGGGGTAGCAGGTAAATTGCTTAAT...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR CCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGTTAGGTAGGAATCCATaGATCTCTGACCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMLGRNP*ISDPHR
Trigger: CCTATGGGGGTCAGAGATCCATGGATTCCTACCTAA...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATTTGGGAAGCTGAGGTaGGAGGACTGCTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEFGKLR*EDCLCP
Trigger: TGGACACAAGCAGTCCTCCCACCTCAGCTTCCCAAA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTTGGGAAGCTGAGGTaGGAGGACTGCTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKFGKLR*EDCLCP
Trigger: TGGACACAAGCAGTCCTCCCACCTCAGCTTCCCAAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 72 bp TTCTTTAATTATCATCGGCATGTGGCTGTCAGTTCCTaGGCTCTCTTGGTTTCACCAAGATCTAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: FFNYHRHVAVSS*ALLVSPRSNSL
Trigger: CAAGGAATTAGATCTTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCACATGCCGATGATAATTAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 72 bp TCTTGCAGCAGCAACTGTCACATTGGTGGATTTGTTTaGATAGTCAACAACAATTCCGGGTCTATGAATGCT +
Preference number: 4 (lower is better)
Translates to: SCSSNCHIGGFV*IVNNNSGSMNA
Trigger: AGCATTCATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTTGCTGCTGCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR TCA 90 bp AACTGTCACATTGGTGGATTTGTTTTGATAGTCAACAACAATTCCGGGTCTATGACAATTCCGGGTCTATaGATGCTTCCAAAATCACCC +
Preference number: 4 (lower is better)
Translates to: NCHIGGFVLIVNNNSGSMTIPGL*MLPKSP
Trigger: GGGTGATTTTGGAAGCATTCATAGACCCGGAATTGT...CATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTATCAGTTTTTGTGGGTaGTTTGCTGAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPISFCG*FAEAYL
Trigger: AAGATAAGCCTCAGCAAATCACCCACAAAAACTGAT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTCTACCTTCATCATGTaGTCATCTACAGTAACACCT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPSTFIM*SSTVTP
Trigger: AGGTGTTACTGTAGATGATCACATGATGAAGGTAGA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACTGCAAGCGCTGCAATaGACTGTCTCTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVLQALQ*TVSTFI
Trigger: GATGAAGGTAGAGACAGTTCATTGCAGCGCTTGCAG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACTGCAAGCGCTGCAATaGACTGTCTCTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLQALQ*TVSTFI
Trigger: GATGAAGGTAGAGACAGTTCATTGCAGCGCTTGCAG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAAGCCTGCTTCCCTTTaGTATGATCAGGAGATTTTA +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPKPASL*YDQEIL
Trigger: TAAAATCTCCTGATCATATCAAAGGGAAGCAGGCTT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAAGCAGAGATTGCAGTaGGCTGAGATAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKKQRLQ*AEIVPL
Trigger: CAGTGGCACTATCTCAGCTCACTGCAATCTCTGCTT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGGCACAAGAATCGCTTaGACCCAGGAAGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVGTRIA*TQEAEI
Trigger: AATCTCTGCTTCCTGGGTTCAAGCGATTCTTGTGCC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGGCACAAGAATCGCTTaGACCCAGGAAGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEGTRIA*TQEAEI
Trigger: AATCTCTGCTTCCTGGGTTCAAGCGATTCTTGTGCC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAGGCTTCATATGGGGTaGAGAAAAACTGCTACCCCC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVRLHMG*RKTATP
Trigger: GGGGGTAGCAGTTTTTCTTCACCCCATATGAAGCCT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370447.3
CDS-3UTR GCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGCCTGATAAGTATTCCTaGAGGCGGAGTGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMPDKYS*RRSVCN
Trigger: ATTACACACACTCCGCCTGCAGGAATACTTATCAGG...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTCTCTTTATTCCTCTTaGAGCAGCAACTGTCACATT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPSLYSS*SSNCHI
Trigger: AATGTGACAGTTGCTGCTGCAAGAGGAATAAAGAGA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAATATACCTAGGGCATTaGCACACTTCGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVIYLGH*HTSMAP
Trigger: AGGGGCCATCGAAGTGTGGCAATGCCCTAGGTATAT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTTTGATACCATGCCGTaGAGGTTGTGTTTTATGAGT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPFDTMP*RLCFMS
Trigger: ACTCATAAAACACAACCTGCACGGCATGGTATCAAA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAATTAGCTGGGCATGGTaGCTCACACTTAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVISWAW*LTLNSP
Trigger: GGGACTGTTAAGTGTGAGCCACCATGCCCAGCTAAT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTTTGATGAAGCTTTCTaGAAGACCTTCCTAGTCCTT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPFDEAF*KTFLVL
Trigger: AAGGACTAGGAAGGTCTTCCAGAAAGCTTCATCAAA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTACTTGTGTAGAAAACTaGATCTATCATGGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPTCVEN*IYHGKG
Trigger: ACCCTTACCATGATAGATTCAGTTTTCTACACAAGT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGGTGGCAGGACCTACTaGATTTACCATTGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEGGRTY*IYHCQE
Trigger: TTCTTGGCAATGGTAAATTCAGTAGGTCCTGCCACC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGGTGGCAGGACCTACTaGATTTACCATTGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKGGRTY*IYHCQE
Trigger: TTCTTGGCAATGGTAAATTCAGTAGGTCCTGCCACC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAACCCTACTCTACCATaGCACATTATTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPNPTLP*HIILGY
Trigger: ATATCCCAAAATAATGTGTCATGGTAGAGTAGGGTT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp CTTTATTCCTCTTGCAGCAGCAACTGTCACATTGGTGGATTTGTTTTGATAGTCTCTCTTTATTCCTCTTaGAGCAGCAACTGTCACATT +
Preference number: 4 (lower is better)
Translates to: LYSSCSSNCHIGGFVLIVSLYSS*SSNCHI
Trigger: AATGTGACAGTTGCTGCTGCAAGAGGAATAAAGAGA...GACTATCAAAACAAATCCACCAATGTGACAGTTGCTGCTGCAAGAGGAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATCTGCCCTTCAGCCTTaGAGATTCCCTGGATTTGTT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVSALQP*RFPGFV
Trigger: AACAAATCCAGGGAATCTGCAAGGCTGAAGGGCAGA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACCATTGCCAAGAATCTaGCCTTCAGCCTTGCAGATT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVPLPRI*PSALQI
Trigger: AATCTGCAAGGCTGAAGGGCAGATTCTTGGCAATGG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATTAGGTAGGAATCCATaGATCTCTGACCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWELGRNP*ISDPHR
Trigger: CCTATGGGGGTCAGAGATCCATGGATTCCTACCTAA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACACCCAGAGAAGACCTaGAGTCGTAAGACTCATAAG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVHPEKT*SRKTHK
Trigger: CTTATGAGTCTTACGACTCCAGGTCTTCTCTGGGTG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGTAATTCTAGCACTTTaGGAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKVILAL*EAEVGG
Trigger: TCCTCCCACCTCAGCTTCCCAAAGTGCTAGAATTAC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGGAGGCCTCAAATGGTaGCAGGACCTACTGAATTTA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKGGLKW*QDLLNL
Trigger: TAAATTCAGTAGGTCCTGCCACCATTTGAGGCCTCC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGGAGGCCTCAAATGGTaGCAGGACCTACTGAATTTA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVGGLKW*QDLLNL
Trigger: TAAATTCAGTAGGTCCTGCCACCATTTGAGGCCTCC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAATGGCTGTCAGTTCCTTaGCTCTCTTGGTTTCACCAA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKWLSVP*LSWFHQ
Trigger: TTGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCA...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAATTATCATCGGCATGTaGCTGTCAGTTCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEIIIGM*LSVPWL
Trigger: GAGCCAAGGAACTGACAGCCACATGCCGATGATAAT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAATTATCATCGGCATGTaGCTGTCAGTTCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKIIIGM*LSVPWL
Trigger: GAGCCAAGGAACTGACAGCCACATGCCGATGATAAT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACTTAGAGGAATTCTGTaGACCAGCAGCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWELRGIL*TSSSES
Trigger: TGACTCAGAGCTGCTGGTCCACAGAATTCCTCTAAG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACTTAGAGGAATTCTGTaGACCAGCAGCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLRGIL*TSSSES
Trigger: TGACTCAGAGCTGCTGGTCCACAGAATTCCTCTAAG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 72 bp TTGCTGAGGCTTATCTTCTCCATAGGTTTTGCTAGTTaGGGTTTCTTGATAAAGGTTCCACTGGGCTTATTA +
Preference number: 4 (lower is better)
Translates to: LLRLIFSIGFAS*GFLIKVPLGLL
Trigger: TAATAAGCCCAGTGGAACCTTTATCAAGAAACCCAAACTAGCAAAACCTATGGAGAAGATAAGCCTCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAACAATTCCGGGTCTATaGATGCTTCCAAAATCACCC +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWETIPGL*MLPKSP
Trigger: GGGTGATTTTGGAAGCATTCATAGACCCGGAATTGT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAACAATTCCGGGTCTATaGATGCTTCCAAAATCACCC +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKTIPGL*MLPKSP
Trigger: GGGTGATTTTGGAAGCATTCATAGACCCGGAATTGT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGAATTCCAGCCTGCATaGCAAAGACAGAACCTAAAG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKEFQPA*QRQNLK
Trigger: CTTTAGGTTCTGTCTTTGTCATGCAGGCTGGAATTC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGAATTCCAGCCTGCATaGCAAAGACAGAACCTAAAG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEEFQPA*QRQNLK
Trigger: CTTTAGGTTCTGTCTTTGTCATGCAGGCTGGAATTC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACACCAGAAATTTGTATaGGGGCCCTATGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKHQKFV*GPYECP
Trigger: AGGACATTCATAGGGCCCTCATACAAATTTCTGGTG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACCTGATAAGTATTCCTaGAGGCGGAGTGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEPDKYS*RRSVCN
Trigger: ATTACACACACTCCGCCTGCAGGAATACTTATCAGG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACCTGATAAGTATTCCTaGAGGCGGAGTGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKPDKYS*RRSVCN
Trigger: ATTACACACACTCCGCCTGCAGGAATACTTATCAGG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACAGGGATATAAACACTaGAAGCGCTGCAATGAACTG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKQGYKH*KRCNEL
Trigger: CAGTTCATTGCAGCGCTTGCAGTGTTTATATCCCTG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACAGGGATATAAACACTaGAAGCGCTGCAATGAACTG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVQGYKH*KRCNEL
Trigger: CAGTTCATTGCAGCGCTTGCAGTGTTTATATCCCTG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAATATGTGGAATGCATaGAACATGGGTGTTAATTCA +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPNMWNA*NMGVNS
Trigger: TGAATTAACACCCATGTTGCATGCATTCCACATATT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAGACTAGAACATTCCTaGCTGGACGGTTACTCCATT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVRLEHS*LDGYSI
Trigger: AATGGAGTAACCGTCCAGGCAGGAATGTTCTAGTCT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTACAGTTCCAAGTTTTaGTGCAAATGGGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPYSSKF*CKWDFQ
Trigger: TTGAAAATCCCATTTGCAGCAAAACTTGGAACTGTA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAATATCATGACTTGAACTaGGTTGGTTGCAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKYHDLN*VGCSGG
Trigger: ACCTCCACTGCAACCAACCCAGTTCAAGTCATGATA...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTCACAACAGACCTCTaGGAATTAGAGGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKFTTDL*ELEDWE
Trigger: TTCCCAGTCCTCTAATTCCCAGAGGTCTGTTGTGAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAATTGCCACACTTCGATaGCCCCTATTTGTATGCTCT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVIATLR*PLFVCS
Trigger: AGAGCATACAAATAGGGGCCATCGAAGTGTGGCAAT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTTTTCTTGTAAGCTCTaGAAGTATCTTCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPFSCKL*KYLQLK
Trigger: TTTGAGCTGAAGATACTTCCAGAGCTTACAAGAAAA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAAACAGATGGTGTTCTaGGTTTTCTATGTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPKQMVF*VFYVFK
Trigger: CTTAAAGACATAGAAAACCCAGAACACCATCTGTTT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGGTGCAGGCTTCATATaGGGTGAAGAAAAACTGCTA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVGAGFI*GEEKLL
Trigger: TAGCAGTTTTTCTTCACCCCATATGAAGCCTGCACC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTTTCTACCTTCATCATGTaGTCATCTACAGTAACACCT +
Preference number: 4 (lower is better)
Translates to: AFTIGLFKMLVAVKTLSLSTFIM*SSTVTP
Trigger: AGGTGTTACTGTAGATGATCACATGATGAAGGTAGA...AAGAGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR TCA 90 bp GCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTTAAGCCTGCTTCCCTTTaGTATGATCAGGAGATTTTA +
Preference number: 4 (lower is better)
Translates to: AFTIGLFKMLVAVKTLSLKPASL*YDQEIL
Trigger: TAAAATCTCCTGATCATATCAAAGGGAAGCAGGCTT...AAGAGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGAAATTATCATGACTTaGACTGGGTTGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEEIIMT*TGLVAV
Trigger: CACTGCAACCAACCCAGTTCAAGTCATGATAATTTC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTGTCTACTTGCAAATaGGAGCCTAGGAGTCAACAA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVLSTCK*EPRSQQ
Trigger: TTGTTGACTCCTAGGCTCTCATTTGCAAGTAGACAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAGTCTGAGACCAATGTaGTTCTTTTCCCCTTATAGG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKSLRPM*FFSPYR
Trigger: CCTATAAGGGGAAAAGAATCACATTGGTCTCAGACT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAGTCTGAGACCAATGTaGTTCTTTTCCCCTTATAGG +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKSLRPM*FFSPYR
Trigger: CCTATAAGGGGAAAAGAATCACATTGGTCTCAGACT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGATTTATGCAGAAGGATaGCTGTTTCACATGTCTACT +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMIYAEG*LFHMST
Trigger: AGTAGACATGTGAAACAGTCATCCTTCTGCATAAAT...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR GCA 90 bp AACTGTCACATTGGTGGATTTGTTTTGATAGTCAACAACAATTCCGGGTCTATGAGAGCACAAAATACTTaGCCAGTTTATATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NCHIGGFVLIVNNNSGSMRAQNT*PVYIFQ
Trigger: CTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCT...CATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATGGCCCCTATTTGTATaGTCTGCATTATATGCTCTG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVWPLFV*SALYAL
Trigger: CAGAGCATATAATGCAGAGCATACAAATAGGGGCCA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATGGCCCCTATTTGTATaGTCTGCATTATATGCTCTG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKWPLFV*SALYAL
Trigger: CAGAGCATATAATGCAGAGCATACAAATAGGGGCCA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ATCATTCAGTCCATCATTAAGGAATCCGGATCCTTCAATTTATGCAGAAGGATGGGATCCTTCAATTTATaGAGAAGGATGACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: IIQSIIKESGSFNLCRRMGSFNL*RRMTVS
Trigger: TGAAACAGTCATCCTTCTGCATAAATTGAAGGATCC...CATCCTTCTGCATAAATTGAAGGATCCGGATTCCTTAATGATGGACTGAATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361911.9
CDS-3UTR CCA 90 bp AACTGTCACATTGGTGGATTTGTTTTGATAGTCAACAACAATTCCGGGTCTATGCAGCAACTGTCACATTaGTGGATTTGTTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: NCHIGGFVLIVNNNSGSMQQLSH*WICFDS
Trigger: ACTATCAAAACAAATCCACCAATGTGACAGTTGCTG...CATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAATTGTGATGACAGGATaGACCCTGAATTCCTACCTA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVIVMTG*TLNSYL
Trigger: TAGGTAGGAATTCAGGGTCCATCCTGTCATCACAAT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
3UTR CAA 72 bp AACACCTCCAAAGAATATGCTCTAGTAAAATCTAGGTaGGTACCCCCAAATCCTCGTTTCTACAAACATTTT +
Preference number: 4 (lower is better)
Translates to: NTSKEYALVKSR*VPPNPRFYKHF
Trigger: AAAATGTTTGTAGAAACGAGGATTTGGGGGTACCAACCTAGATTTTACTAGAGCATATTCTTTGGAGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAATCAGTTTTTGTGGGTaGTTTGCTGAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEISFCG*FAEAYL
Trigger: AAGATAAGCCTCAGCAAATCACCCACAAAAACTGAT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAATCAGTTTTTGTGGGTaGTTTGCTGAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKISFCG*FAEAYL
Trigger: AAGATAAGCCTCAGCAAATCACCCACAAAAACTGAT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATCTACCTTCATCATGTaGTCATCTACAGTAACACCT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKSTFIM*SSTVTP
Trigger: AGGTGTTACTGTAGATGATCACATGATGAAGGTAGA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATGCTTCCCTTTGATATaGTCAGGAGATTTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVCFPLI*SGDFKC
Trigger: GCACTTAAAATCTCCTGATCATATCAAAGGGAAGCA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAAGCCTGCTTCCCTTTaGTATGATCAGGAGATTTTA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKKPASL*YDQEIL
Trigger: TAAAATCTCCTGATCATATCAAAGGGAAGCAGGCTT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAAATTGATGCACACTTaGATATTCACTCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKKLMHT*IFTPKS
Trigger: GCTCTTGGGAGTGAATATTCAAGTGTGCATCAATTT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAAATTGATGCACACTTaGATATTCACTCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEKLMHT*IFTPKS
Trigger: GCTCTTGGGAGTGAATATTCAAGTGTGCATCAATTT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAAATTGATGCACACTTaGATATTCACTCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVKLMHT*IFTPKS
Trigger: GCTCTTGGGAGTGAATATTCAAGTGTGCATCAATTT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGGGGTGAAGAAAAACTaGTGTAGGAAGAGTAATTCT +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKGVKKN*CRKSNS
Trigger: AGAATTACTCTTCCTACAGCAGTTTTTCTTCACCCC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS-3UTR GCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATTCCGGGTCTATGAATaGTTCCAAAATCACCCATAT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEFRVYE*FQNHPY
Trigger: ATATGGGTGATTTTGGAAGCATTCATAGACCCGGAA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTCCGGGTCTATGAATaGTTCCAAAATCACCCATAT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVFRVYE*FQNHPY
Trigger: ATATGGGTGATTTTGGAAGCATTCATAGACCCGGAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAATTCCGGGTCTATGAATaGTTCCAAAATCACCCATAT +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKFRVYE*FQNHPY
Trigger: ATATGGGTGATTTTGGAAGCATTCATAGACCCGGAA...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR GCA 90 bp AACTGTCACATTGGTGGATTTGTTTTGATAGTCAACAACAATTCCGGGTCTATGTTCACCATACACTCATaGAAAAACTCCATAACTACT +
Preference number: 4 (lower is better)
Translates to: NCHIGGFVLIVNNNSGSMFTIHS*KNSITT
Trigger: AGTAGTTATGGAGTTTTTGCATGAGTGTATGGTGAA...CATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTTGATACCATGCCGTaGAGGTTGTGTTTTATGAGT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKFDTMP*RLCFMS
Trigger: ACTCATAAAACACAACCTGCACGGCATGGTATCAAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGAAAAGTCTGCTTCTTaGTTCTTCAGCCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKEKSAS*FFSQKQ
Trigger: CTGTTTTTGGCTGAAGAACCAAGAAGCAGACTTTTC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGAAAAGTCTGCTTCTTaGTTCTTCAGCCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKEKSAS*FFSQKQ
Trigger: CTGTTTTTGGCTGAAGAACCAAGAAGCAGACTTTTC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGCCTTGCAGATTCCCTaGATTTGTTTGAATACCAAA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVALQIP*ICLNTK
Trigger: TTTGGTATTCAAACAAATCCAGGGAATCTGCAAGGC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGCCTTGCAGATTCCCTaGATTTGTTTGAATACCAAA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKALQIP*ICLNTK
Trigger: TTTGGTATTCAAACAAATCCAGGGAATCTGCAAGGC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATGGGAAATAGACAGCTaGCAGATTTTTCTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEWEIDS*QIFLCV
Trigger: CACACAAAGAAAAATCTGCCAGCTGTCTATTTCCCA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATGGGAAATAGACAGCTaGCAGATTTTTCTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVWEIDS*QIFLCV
Trigger: CACACAAAGAAAAATCTGCCAGCTGTCTATTTCCCA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATGCATAGTATTTACCTaGCACTGTGATATATGCAGG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWECIVFT*HCDICR
Trigger: CCTGCATATATCACAGTGCCAGGTAAATACTATGCA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTTGATGAAGCTTTCTaGAAGACCTTCCTAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVFDEAF*KTFLVL
Trigger: AAGGACTAGGAAGGTCTTCCAGAAAGCTTCATCAAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAACTTGTGTAGAAAACTaGATCTATCATGGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVTCVEN*IYHGKG
Trigger: ACCCTTACCATGATAGATTCAGTTTTCTACACAAGT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATTTCTTTACATAATTTaGTACCATGCCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEFLYII*YHAVQV
Trigger: AACCTGCACGGCATGGTATCAAATTATGTAAAGAAA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTTCTTTACATAATTTaGTACCATGCCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKFLYII*YHAVQV
Trigger: AACCTGCACGGCATGGTATCAAATTATGTAAAGAAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATTTGAACTCTTTATCTaGCAATTTCTAAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEFELFI*QFLSAV
Trigger: CACAGCGCTTAGAAATTGTCAGATAAAGAGTTCAAA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTTGAACTCTTTATCTaGCAATTTCTAAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVFELFI*QFLSAV
Trigger: CACAGCGCTTAGAAATTGTCAGATAAAGAGTTCAAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACCTCAGAGACCAAATTaGGATGTTTCAACATTTTGT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKPQRPN*DVSTFC
Trigger: ACAAAATGTTGAAACATCTCAATTTGGTCTCTGAGG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACCTCAGAGACCAAATTaGGATGTTTCAACATTTTGT +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKPQRPN*DVSTFC
Trigger: ACAAAATGTTGAAACATCTCAATTTGGTCTCTGAGG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAACCCTACTCTACCATaGCACATTATTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKNPTLP*HIILGY
Trigger: ATATCCCAAAATAATGTGTCATGGTAGAGTAGGGTT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGTCTTAATCCTGACTTaGATGCAGATGTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVVLILT*MQMFDE
Trigger: TTCATCAAACATCTGCATTCAAGTCAGGATTAAGAC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGTCTTAATCCTGACTTaGATGCAGATGTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKVLILT*MQMFDE
Trigger: TTCATCAAACATCTGCATTCAAGTCAGGATTAAGAC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATTTCTTAGGGTTAAATaGTTGTTGCATAGGCAACAG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEFLRVK*LLHRQQ
Trigger: CTGTTGCCTATGCAACAATCATTTAACCCTAAGAAA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR TCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTTCTTAGGGTTAAATaGTTGTTGCATAGGCAACAG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVFLRVK*LLHRQQ
Trigger: CTGTTGCCTATGCAACAATCATTTAACCCTAAGAAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAAGCATCATAGTTTCTaGTTCCAAACGTACTTTCAG +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVKHHSF*FQTYFQ
Trigger: CTGAAAGTACGTTTGGAAGCAGAAACTATGATGCTT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAAGCATCATAGTTTCTaGTTCCAAACGTACTTTCAG +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKKHHSF*FQTYFQ
Trigger: CTGAAAGTACGTTTGGAAGCAGAAACTATGATGCTT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGACTATAAAGTAAACTaGCCGCCTACAAATTATCCA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKDYKVN*PPTNYP
Trigger: TGGATAATTTGTAGGCGGGCAGTTTACTTTATAGTC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACCTATTTGTATGCTCTaGATTATATGCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKPICML*IICSAH
Trigger: ATGTGCAGAGCATATAATGCAGAGCATACAAATAGG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACCTATTTGTATGCTCTaGATTATATGCTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVPICML*IICSAH
Trigger: ATGTGCAGAGCATATAATGCAGAGCATACAAATAGG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACATAATTTGATACCATaGCGTGCAGGTTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEHNLIP*RAGCVL
Trigger: TAAAACACAACCTGCACGGCATGGTATCAAATTATG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACATAATTTGATACCATaGCGTGCAGGTTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKHNLIP*RAGCVL
Trigger: TAAAACACAACCTGCACGGCATGGTATCAAATTATG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACAGCAACTGTCACATTaGTGGATTTGTTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEQQLSH*WICFDS
Trigger: ACTATCAAAACAAATCCACCAATGTGACAGTTGCTG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACAGCAACTGTCACATTaGTGGATTTGTTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVQQLSH*WICFDS
Trigger: ACTATCAAAACAAATCCACCAATGTGACAGTTGCTG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
3UTR CAA 72 bp AAATTTCCTAAAGGATTGAGTTACATAATCGTCATGTaGCAGTTTTCAGATAAACCCTACTCTACCATGACA +
Preference number: 4 (lower is better)
Translates to: KFPKGLSYIIVM*QFSDKPYSTMT
Trigger: TGTCATGGTAGAGTAGGGTTTATCTGAAAACTGCAACATGACGATTATGTAACTCAATCCTTTAGGAAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTCACCATACACTCATaGAAAAACTCCATAACTACT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKFTIHS*KNSITT
Trigger: AGTAGTTATGGAGTTTTTGCATGAGTGTATGGTGAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATTCACCATACACTCATaGAAAAACTCCATAACTACT +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEFTIHS*KNSITT
Trigger: AGTAGTTATGGAGTTTTTGCATGAGTGTATGGTGAA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp TTCTCACCCTTAACAAAACGTTCATATCGCGCCTTCACTATTGGATTATTTAAAAATATGTGGAATGCATaGAACATGGGTGTTAATTCA +
Preference number: 4 (lower is better)
Translates to: FSPLTKRSYRAFTIGLFKNMWNA*NMGVNS
Trigger: TGAATTAACACCCATGTTGCATGCATTCCACATATT...TTTAAATAATCCAATAGTGAAGGCGCGATATGAACGTTTTGTTAAGGGTGAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR GCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGACTTGAATCAAGCATaGCATTTTAATCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKDLNQA*HFNLTL
Trigger: GAGAGTTAGATTAAAATGGCATGCTTGATTCAAGTC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGACTTGAATCAAGCATaGCATTTTAATCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVDLNQA*HFNLTL
Trigger: GAGAGTTAGATTAAAATGGCATGCTTGATTCAAGTC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGGGTTAAATGATTGTTaGATAGGCAACAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVGLNDC*IGNSHY
Trigger: ATAATGACTGTTGCCTATGCAACAATCATTTAACCC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGGGTTAAATGATTGTTaGATAGGCAACAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKGLNDC*IGNSHY
Trigger: ATAATGACTGTTGCCTATGCAACAATCATTTAACCC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR GCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATACAGTTCCAAGTTTTaGTGCAAATGGGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVYSSKF*CKWDFQ
Trigger: TTGAAAATCCCATTTGCAGCAAAACTTGGAACTGTA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATACCCTTCTCTTATTTaGCACCAAATCCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKYPSLI*HQIPKI
Trigger: AATTTTAGGGATTTGGTGCCAAATAAGAGAAGGGTA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAGTGGGCTTATTATATaGGAAAATTACTACTCCTAC +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVSGLII*ENYYSY
Trigger: GTAGGAGTAGTAATTTTCCCATATAATAAGCCCACT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAGTGGGCTTATTATATaGGAAAATTACTACTCCTAC +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKSGLII*ENYYSY
Trigger: GTAGGAGTAGTAATTTTCCCATATAATAAGCCCACT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAACTACATGTACAAGAGTaGGCTTATTATATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKLHVQE*AYYMGK
Trigger: TTTTCCCATATAATAAGCCCACTCTTGTACATGTAG...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGAGTCTCACCTTATTTaGCAAACATCAAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKESHLI*QTSNCV
Trigger: AACACAATTTGATGTTTGCCAAATAAGGTGAGACTC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACTCAGTATCATTATCTaGAGTTTATTTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLSIII*SLFSGL
Trigger: AAGCCCAGAAAATAAACTCCAGATAATGATACTGAG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACTCAGTATCATTATCTaGAGTTTATTTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVLSIII*SLFSGL
Trigger: AAGCCCAGAAAATAAACTCCAGATAATGATACTGAG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTTTCTTGTAAGCTCTaGAAGTATCTTCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKFSCKL*KYLQLK
Trigger: TTTGAGCTGAAGATACTTCCAGAGCTTACAAGAAAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CCA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAAACAGATGGTGTTCTaGGTTTTCTATGTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEKQMVF*VFYVFK
Trigger: CTTAAAGACATAGAAAACCCAGAACACCATCTGTTT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS CCA 90 bp AACCATAGCCAGATCTGTACAGATCTCGCCCACCCAGAGAAGACCTaGAGTCGTAAGACTCATAAGGTCCAAACCTGCTACCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: NHSQICTDLAHPEKT*SRKTHKVQTCYPHH
Trigger: GTGGTGGGGGTAGCAGGTTTGGACCTTATGAGTCTTACGACTCCAGGTCTTCTCTGGGTGGGCGAGATCTGTACAGATCTGGCTATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS GCA 90 bp CTCGGCCTCTGCCTGTTGATGGTCCTCCAAAAGCATCATAGTTTCTaGTTCCAAACGTACTTTCAGGATAAGCAGGCGTTCCTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: LGLCLLMVLQKHHSF*FQTYFQDKQAFLSP
Trigger: GGGGGAGAGGAACGCCTGCTTATCCTGAAAGTACGTTTGGAAGCAGAAACTATGATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS TCA 90 bp GCTTCCAAAATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTGTTaGTGGTCCTCCAAAAGCATCATAGTTTCTGCTTCCAAACGTACT +
Preference number: 5 (lower is better)
Translates to: ASKITHMSSASASAC*WSSKSIIVSASKRT
Trigger: AGTACGTTTGGAAGCAGAAACTATGATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATTTTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS CCA 90 bp CACTGTGATTGTCCATGCCATATGACTGGTTTAGGTAGGAATCCATaGATCTCTGACCCCCATAGGATCCATGGCCATAGTCACGATCCA +
Preference number: 5 (lower is better)
Translates to: HCDCPCHMTGLGRNP*ISDPHRIHGHSHDP
Trigger: TGGATCGTGACTATGGCCATGGATCCTATGGGGGTCAGAGATCCATGGATTCCTACCTAAACCAGTCATATGGCATGGACAATCACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000361911.9
ENST00000370447.3
CDS GCA 90 bp TGGTGGATTTGTTTTGATAGTCAACAACAATTCCGGGTCTATGAATaGTTCCAAAATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: WWICFDSQQQFRVYE*FQNHPYVLGLGLCL
Trigger: CAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATTTTGGAAGCATTCATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAGGCGGGACGACCGCTaGAGCCCAGGAGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKRRDDR*SPGGQS
Trigger: GCTTTGACCTCCTGGGCTCAAGCGGTCGTCCCGCCT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAAGGCGGGACGACCGCTaGAGCCCAGGAGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVRRDDR*SPGGQS
Trigger: GCTTTGACCTCCTGGGCTCAAGCGGTCGTCCCGCCT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTGTGGCTGTCAGTTCCTaGGCTCTCTTGGTTTCACCA +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPVAVSS*ALLVSP
Trigger: TGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCAC...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAATATACCTAGGGCATaGCCACACTTCGATGGCCCC +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPNIPRA*PHFDGP
Trigger: GGGGCCATCGAAGTGTGGCAATGCCCTAGGTATATT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTTTTCTCTTCTGCGCCTTaGTTTCTCTCGCCGAGCCTC +
Preference number: 5 (lower is better)
Translates to: AFTIGLFKMLVAVKTLSLFSSAP*FLSPSL
Trigger: GAGGCTCGGCGAGAGAAACAAAGGCGCAGAAGAGAA...AAGAGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACTTGAGCCCAGGAGGTaGAGGCTACACTGCACTCCA +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVLEPRR*RLHCTP
Trigger: TGGAGTGCAGTGTAGCCTCAACCTCCTGGGCTCAAG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp CTTTATTCCTCTTGCAGCAGCAACTGTCACATTGGTGGATTTGTTTTGATAGTCGCTAGTTTGGGTTTCTaGATAAAGGTTCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: LYSSCSSNCHIGGFVLIVASLGF*IKVPLG
Trigger: GCCCAGTGGAACCTTTATCAAGAAACCCAAACTAGC...GACTATCAAAACAAATCCACCAATGTGACAGTTGCTGCTGCAAGAGGAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATTCTCTTCTGCGCCTTaGTTTCTCTCGCCGAGCCTC +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVFSSAP*FLSPSL
Trigger: GAGGCTCGGCGAGAGAAACAAAGGCGCAGAAGAGAA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAACTTGGGAGGCTAAGTaGGAGGATCGCTTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVTWEAK*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCAACTTAGCCTCCCAAGT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAACTTGGGAGGCTAAGTaGGAGGATCGCTTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKTWEAK*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCAACTTAGCCTCCCAAGT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTTCTCTTTATTCCTCTaGCAGCAGCAACTGTCACAT +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPFSLFL*QQQLSH
Trigger: ATGTGACAGTTGCTGCTGCAAGAGGAATAAAGAGAA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGCGGAAACTCCTGCCTaGATAGGGGAAGAGTTACAG +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVAETPA*IGEELQ
Trigger: CTGTAACTCTTCCCCTATCAAGGCAGGAGTTTCCGC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTCTACTGAATTTACCATaGCCAAGAATCTGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPLLNLP*PRICPS
Trigger: TGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAG...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTAGTTCCTTGGCTCTCTaGGTTTCACCAAGATCTAAT +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPSSLAL*VSPRSN
Trigger: ATTAGATCTTGGTGAAACCAAGAGAGCCAAGGAACT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGTGGCTGTCAGTTCCTaGGCTCTCTTGGTTTCACCA +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKVAVSS*ALLVSP
Trigger: TGGTGAAACCAAGAGAGCCAAGGAACTGACAGCCAC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTTTCGATGGCCCCTATTaGTATGCTCTGCATTATATG +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPFDGPY*YALHYM
Trigger: CATATAATGCAGAGCATACAAATAGGGGCCATCGAA...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAACCTCCGAAGCGGCTTaGTTCGGGTTCATTAAAACC +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKTSEAA*FGFIKT
Trigger: GGTTTTAATGAACCCGAACAAAGCCGCTTCGGAGGT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAACCCAGGCCTCAATTTaGAACGGGAGTAAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWETQASI*NGSKVL
Trigger: AAGCACCTTACTCCCGTTCAAAATTGAGGCCTGGGT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS-3UTR CAA 90 bp CTTTATTCCTCTTGCAGCAGCAACTGTCACATTGGTGGATTTGTTTTGATAGTCTTAATTTTCTTCAGGTaGCTCAACAGGGAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LYSSCSSNCHIGGFVLIVLIFFR*LNREVS
Trigger: GCTGACTTCCCTGTTGAGCAACCTGAAGAAAATTAA...GACTATCAAAACAAATCCACCAATGTGACAGTTGCTGCTGCAAGAGGAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAGGCACAAGAATCGCTaGAACCCAGGAAGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKRHKNR*NPGSRD
Trigger: ATCTCTGCTTCCTGGGTTCAAGCGATTCTTGTGCCT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTACTTTTTCATTGTTTTaGCTCAGCACTGGAGACTTC +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPTFSLF*LSTGDF
Trigger: GAAGTCTCCAGTGCTGAGCAAAAACAATGAAAAAGT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGCTAGTTTGGGTTTCTaGATAAAGGTTCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEASLGF*IKVPLG
Trigger: GCCCAGTGGAACCTTTATCAAGAAACCCAAACTAGC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTTGTTTTTGTGGGTGATTaGCTGAGGCTTATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: AFTIGLFKMLVAVKTLSLVFVGD*LRLIFS
Trigger: GGAGAAGATAAGCCTCAGCAAATCACCCACAAAAAC...AAGAGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTATCGCGCCTTCACTATaGGATTATTTAAAATGCTTG +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPIAPSL*DYLKCL
Trigger: CAAGCATTTTAAATAATCCAATAGTGAAGGCGCGAT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTGTTTATTTTCTGGGCTaGAGTGAAAAATTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPVYFLG*SEKFPE
Trigger: TTCAGGGAATTTTTCACTCAAGCCCAGAAAATAAAC...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ATGAAGAATCCCCCAAACCTATGTTTATATTCAAAAGGGCGGAAACTCCTGCCTATACAGTTCCAAGTTTaGCTGCAAATGGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: MKNPPNLCLYSKGRKLLPIQFQV*LQMGFS
Trigger: TGAAAATCCCATTTGCAGCAAAACTTGGAACTGTAT...AGGCAGGAGTTTCCGCCCTTTTGAATATAAACATAGGTTTGGGGGATTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGTTTTTGTGGGTGATTaGCTGAGGCTTATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVVFVGD*LRLIFS
Trigger: GGAGAAGATAAGCCTCAGCAAATCACCCACAAAAAC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGTTTTTGTGGGTGATTaGCTGAGGCTTATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKVFVGD*LRLIFS
Trigger: GGAGAAGATAAGCCTCAGCAAATCACCCACAAAAAC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACTCATCTCCTTCTATTaGCTGATCCTGAGAATGGTC +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWELISFY*LILRMV
Trigger: GACCATTCTCAGGATCAGCAAATAGAAGGAGATGAG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACTCATCTCCTTCTATTaGCTGATCCTGAGAATGGTC +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLISFY*LILRMV
Trigger: GACCATTCTCAGGATCAGCAAATAGAAGGAGATGAG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR CAA 90 bp CGCGCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTAAAATTGATGCACACTaGAATATTCACTCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RAFTIGLFKMLVAVKTLSKIDAH*NIHSQE
Trigger: CTCTTGGGAGTGAATATTCAAGTGTGCATCAATTTT...AGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGCGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp AACTGTCACATTGGTGGATTTGTTTTGATAGTCAACAACAATTCCGGGTCTATGCAGAGCACAAAATACTaGCCCAGTTTATATCTTCCA +
Preference number: 5 (lower is better)
Translates to: NCHIGGFVLIVNNNSGSMQSTKY*PSLYLP
Trigger: TGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTG...CATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACTAGTAAAATCTAGGTaGGTACCCCCAAATCCTCGT +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVLVKSR*VPPNPR
Trigger: ACGAGGATTTGGGGGTACCAACCTAGATTTTACTAG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAACTAGTAAAATCTAGGTaGGTACCCCCAAATCCTCGT +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLVKSR*VPPNPR
Trigger: ACGAGGATTTGGGGGTACCAACCTAGATTTTACTAG...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGCTGTGCCCTTACTCTaGACAGTTTCACTCAAGATA +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKAVPLL*TVSLKI
Trigger: TATCTTGAGTGAAACTGTCAAGAGTAAGGGCACAGC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGCTGTGCCCTTACTCTaGACAGTTTCACTCAAGATA +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVAVPLL*TVSLKI
Trigger: TATCTTGAGTGAAACTGTCAAGAGTAAGGGCACAGC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS TCA 90 bp ATGCTTTACTGGCACTCAAAAGAAGAATTTTTAGATAAATATCCTTaGATGTCAGACCTCCATAAGATCCAGGGCCATAATCACGATCCA +
Preference number: 5 (lower is better)
Translates to: MLYWHSKEEFLDKYP*MSDLHKIQGHNHDP
Trigger: TGGATCGTGATTATGGCCCTGGATCTTATGGAGGTCTGACATTCAAGGATATTTATCTAAAAATTCTTCTTTTGAGTGCCAGTAAAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTCTCTTTATTCCTCTaGCAGCAGCAACTGTCACAT +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKFSLFL*QQQLSH
Trigger: ATGTGACAGTTGCTGCTGCAAGAGGAATAAAGAGAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAATTAATTTTCTTCAGGTaGCTCAACAGGGAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKLIFFR*LNREVS
Trigger: GCTGACTTCCCTGTTGAGCAACCTGAAGAAAATTAA...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAATTAATTTTCTTCAGGTaGCTCAACAGGGAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKLIFFR*LNREVS
Trigger: GCTGACTTCCCTGTTGAGCAACCTGAAGAAAATTAA...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAACTACTGAATTTACCATaGCCAAGAATCTGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWELLNLP*PRICPS
Trigger: TGAAGGGCAGATTCTTGGCAATGGTAAATTCAGTAG...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAGTTCCTTGGCTCTCTaGGTTTCACCAAGATCTAAT +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWESSLAL*VSPRSN
Trigger: ATTAGATCTTGGTGAAACCAAGAGAGCCAAGGAACT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAATTCGATGGCCCCTATTaGTATGCTCTGCATTATATG +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKFDGPY*YALHYM
Trigger: CATATAATGCAGAGCATACAAATAGGGGCCATCGAA...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAGTTTCTCTTGGATGTTaGTCTCTACAATCACACTGC +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKVSLGC*SLQSHC
Trigger: GCAGTGTGATTGTAGAGACAAACATCCAAGAGAAAC...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGTTTCTCTTGGATGTTaGTCTCTACAATCACACTGC +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVVSLGC*SLQSHC
Trigger: GCAGTGTGATTGTAGAGACAAACATCCAAGAGAAAC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCTTCACTATTGGATTATTTAAAATGCTTGTAGCAGTCAAGACACTCTCTCTTATCGCGCCTTCACTATaGGATTATTTAAAATGCTTG +
Preference number: 5 (lower is better)
Translates to: AFTIGLFKMLVAVKTLSLIAPSL*DYLKCL
Trigger: CAAGCATTTTAAATAATCCAATAGTGAAGGCGCGAT...AAGAGAGAGTGTCTTGACTGCTACAAGCATTTTAAATAATCCAATAGTGAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTACAGAGCACAAAATACTaGCCCAGTTTATATCTTCCA +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVQSTKY*PSLYLP
Trigger: TGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTG...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAAGAAATTATCATGACTaGAACTGGGTTGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKRNYHD*NWVGCS
Trigger: ACTGCAACCAACCCAGTTCAAGTCATGATAATTTCT...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAGAAATTATCATGACTaGAACTGGGTTGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKRNYHD*NWVGCS
Trigger: ACTGCAACCAACCCAGTTCAAGTCATGATAATTTCT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGCAGATTCCCTGGATTaGTTTGAATACCAAATAGAG +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEADSLD*FEYQIE
Trigger: CTCTATTTGGTATTCAAACAAATCCAGGGAATCTGC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAGCAGATTCCCTGGATTaGTTTGAATACCAAATAGAG +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVADSLD*FEYQIE
Trigger: CTCTATTTGGTATTCAAACAAATCCAGGGAATCTGC...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTAACTTTTTCATTGTTTTaGCTCAGCACTGGAGACTTC +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVTFSLF*LSTGDF
Trigger: GAAGTCTCCAGTGCTGAGCAAAAACAATGAAAAAGT...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAATGCATGACTTTTTCATaGTTTTTGCTCAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWECMTFS*FLLSTG
Trigger: TCCAGTGCTGAGCAAAAACAATGAAAAAGTCATGCA...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAATCGCGCCTTCACTATaGGATTATTTAAAATGCTTG +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKIAPSL*DYLKCL
Trigger: CAAGCATTTTAAATAATCCAATAGTGAAGGCGCGAT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAAAAATTGATGCACACTaGAATATTCACTCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEKIDAH*NIHSQE
Trigger: CTCTTGGGAGTGAATATTCAAGTGTGCATCAATTTT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp GCCCAAACACAGTATCTGTCATATATTGTTTTGGTGTTCTACAACCCTTTAAAAAAAATTGATGCACACTaGAATATTCACTCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: AQTQYLSYIVLVFYNPLKKIDAH*NIHSQE
Trigger: CTCTTGGGAGTGAATATTCAAGTGTGCATCAATTTT...TTTTAAAGGGTTGTAGAACACCAAAACAATATATGACAGATACTGTGTTTGGGC
36% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAGGGATTACACATATTTaGTCAGTATTCATCCTGCAT +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEGITHI*SVFILH
Trigger: ATGCAGGATGAATACTGACAAAATATGTGTAATCCC...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp ACAGAGCACAAAATACTTGCCCAGTTTATATCTTCCAGGGTAAGTATTCAAAAAGGGATTACACATATTTaGTCAGTATTCATCCTGCAT +
Preference number: 5 (lower is better)
Translates to: TEHKILAQFISSRVSIQKGITHI*SVFILH
Trigger: ATGCAGGATGAATACTGACAAAATATGTGTAATCCC...TTTTTGAATACTTACCCTGGAAGATATAAACTGGGCAAGTATTTTGTGCTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp AAAACATTTTATTGCTACAAAGGGAAACATGGTCACAAAGAGCCTTTAAGCGTATACATAATCGTCATGTaGCAGTTTTCAGATAAACCC +
Preference number: 5 (lower is better)
Translates to: KTFYCYKGKHGHKEPLSVYIIVM*QFSDKP
Trigger: GGGTTTATCTGAAAACTGCAACATGACGATTATGTA...TACGCTTAAAGGCTCTTTGTGACCATGTTTCCCTTTGTAGCAATAAAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS-3UTR CAA 90 bp TGTAGTTCTTTTCTCTGTTTCTACATGTACAAGAGTGGGCTTATTATATGGGAAATACAGTTCCAAGTTTaGCTGCAAATGGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: CSSFLCFYMYKSGLIIWEIQFQV*LQMGFS
Trigger: TGAAAATCCCATTTGCAGCAAAACTTGGAACTGTAT...TTCCCATATAATAAGCCCACTCTTGTACATGTAGAAACAGAGAAAAGAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS TCA 72 bp TCTTCCTCTGTCCTCCATAAACCCAGGCCTCAATTTTaGACGGGAGTAAGGTGCTTCCCAGCTAGACCCGCC +
Preference number: 6 (lower is better)
Translates to: SSSVLHKPRPQF*TGVRCFPARPA
Trigger: GGCGGGTCTAGCTGGGAAGCACCTTACTCCCGTTCAAAATTGAGGCCTGGGTTTATGGAGGACAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS TCA 72 bp ATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTGTTaGTGGTCCTCCAAAAGCATCATAGTTTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: ITHMSSASASAC*WSSKSIIVSAS
Trigger: GGAAGCAGAAACTATGATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS CCA 72 bp CAGATCTGTACAGATCTCGCCCACCCAGAGAAGACCTaGAGTCGTAAGACTCATAAGGTCCAAACCTGCTAC +
Preference number: 6 (lower is better)
Translates to: QICTDLAHPEKT*SRKTHKVQTCY
Trigger: GTAGCAGGTTTGGACCTTATGAGTCTTACGACTCCAGGTCTTCTCTGGGTGGGCGAGATCTGTACAGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS CAA 72 bp AATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTGTaGATGGTCCTCCAAAAGCATCATAGTTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: NHPYVLGLGLCL*MVLQKHHSFCF
Trigger: GAAGCAGAAACTATGATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS CAA 90 bp TGCTTCCAAAATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTGTaGATGGTCCTCCAAAAGCATCATAGTTTCTGCTTCCAAACGTAC +
Preference number: 6 (lower is better)
Translates to: CFQNHPYVLGLGLCL*MVLQKHHSFCFQTY
Trigger: GTACGTTTGGAAGCAGAAACTATGATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATTTTGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS GCA 72 bp TTCCAAAATCACCCATATGTCCTCGGCCTCGGCCTCTaGCTGTTGATGGTCCTCCAAAAGCATCATAGTTTC +
Preference number: 6 (lower is better)
Translates to: FQNHPYVLGLGL*LLMVLQKHHSF
Trigger: GAAACTATGATGCTTTTGGAGGACCATCAACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS CCA 72 bp TGTCCATGCCATATGACTGGTTTAGGTAGGAATCCATaGATCTCTGACCCCCATAGGATCCATGGCCATAGT +
Preference number: 6 (lower is better)
Translates to: CPCHMTGLGRNP*ISDPHRIHGHS
Trigger: ACTATGGCCATGGATCCTATGGGGGTCAGAGATCCATGGATTCCTACCTAAACCAGTCATATGGCATGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000361911.9
ENST00000370447.3
CDS CAA 90 bp GTAGGAGCTCTCAAATCGACCACCATAACTACCTCCGAAGCGGCTTaGTTCGGGTTCATTAAAACCATAGCCAGATCTGTACAGATCTCG +
Preference number: 6 (lower is better)
Translates to: VGALKSTTITTSEAA*FGFIKTIARSVQIS
Trigger: CGAGATCTGTACAGATCTGGCTATGGTTTTAATGAACCCGAACAAAGCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAGAGCTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS GCA 72 bp TGTTTTGATAGTCAACAACAATTCCGGGTCTATGAATaGTTCCAAAATCACCCATATGTCCTCGGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: CFDSQQQFRVYE*FQNHPYVLGLG
Trigger: GCCGAGGCCGAGGACATATGGGTGATTTTGGAAGCATTCATAGACCCGGAATTGTTGTTGACTATCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340281.9
ENST00000370447.3
CDS CAA 72 bp CTCAAATCGACCACCATAACTACCTCCGAAGCGGCTTaGTTCGGGTTCATTAAAACCATAGCCAGATCTGTA +
Preference number: 6 (lower is better)
Translates to: LKSTTITTSEAA*FGFIKTIARSV
Trigger: TACAGATCTGGCTATGGTTTTAATGAACCCGAACAAAGCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340281.9
CDS CAA 90 bp CTTTATTCCTCTTGCAGCAGCAACTGTCACATTGGTGGATTTGTTTaGATAGTCAACAACAATTCCGGGTCTATGAATGCTTCCAAAATC +
Preference number: 6 (lower is better)
Translates to: LYSSCSSNCHIGGFV*IVNNNSGSMNASKI
Trigger: GATTTTGGAAGCATTCATAGACCCGGAATTGTTGTTGACTATCAAAACAAATCCACCAATGTGACAGTTGCTGCTGCAAGAGGAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340281.9
ENST00000370447.3
ENST00000394583.7
CDS GCA 72 bp TGTTTTGATAGTCAACAACAATTCCGGGTCTATGAATaGTTCCAAAATCACCCATATGCTTTACTGGCACTC +
Preference number: 6 (lower is better)
Translates to: CFDSQQQFRVYE*FQNHPYALLAL
Trigger: GAGTGCCAGTAAAGCATATGGGTGATTTTGGAAGCATTCATAGACCCGGAATTGTTGTTGACTATCAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394583.7