RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF319 (Homo sapiens)

Ensembl gene IDs: ENSG00000166188

Ensembl transcript IDs: ENST00000299237.3, ENST00000562909.1

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAAGGCAGCTGTaGGGAGCTAGGCTGCGCGAGGCCTGCTGGGCCCACGGCGCCGAC +
Preference number: 1 (lower is better)
Translates to: SQNTELGGALGARQL*GARLREACWAHGAD
Trigger: GTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAGCCTAGCTCCTCACAGCTGCCTTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR GCA 90 bp GCACTGCCCGCTGGTGCCAGGAGTACGAGCGGCACACCCTCTCCCTaGCTCATACCCCTGCGTCCTCACTCCCGAGGTCTCAGAACACCG +
Preference number: 1 (lower is better)
Translates to: ALPAGARSTSGTPSP*LIPLRPHSRGLRTP
Trigger: CGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGGGGTATGAGGCAGGGAGAGGGTGTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR GCA 90 bp GGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTaGCCGCTGGTGCCAGGAGTACGAGCGGCACACCCTCTCCCTGCC +
Preference number: 1 (lower is better)
Translates to: GLWNQDGPQQSGRPH*PLVPGVRAAHPLPA
Trigger: GGCAGGGAGAGGGTGTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp GGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTaGTGCCAGGAGTACGAGCGGCACACCCTCTCCCTGCCTCATACC +
Preference number: 1 (lower is better)
Translates to: GIRMGHSNLAARTAR*CQEYERHTLSLPHT
Trigger: GGTATGAGGCAGGGAGAGGGTGTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTaGCCGCCCGCACTGCCCGCTGGTGCCAGGAGTACGAGCGGCACA +
Preference number: 1 (lower is better)
Translates to: VMGKRFVESGWATAI*PPALPAGARSTSGT
Trigger: TGTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 90 bp GGAGATCCTAGGCCTGGTCCTGCTTCCTCCCAGCCTCAGGTGGGCTaGCAATCCCTGCCTTTCACACCAGCAGTTCTGTCTGCTGAGAGC +
Preference number: 1 (lower is better)
Translates to: GDPRPGPASSQPQVG*QSLPFTPAVLSAES
Trigger: GCTCTCAGCAGACAGAACTGCTGGTGTGAAAGGCAGGGATTGTCAGCCCACCTGAGGCTGGGAGGAAGCAGGACCAGGCCTAGGATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp GTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTaGTCAACTCCATCCACCAGGTCCCCCACAGGCTTCCTTAACCCA +
Preference number: 1 (lower is better)
Translates to: VLLGFLRRAVATQRC*STPSTRSPTGFLNP
Trigger: TGGGTTAAGGAAGCCTGTGGGGGACCTGGTGGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAGAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp CCTGTGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTaGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATC +
Preference number: 1 (lower is better)
Translates to: PVATGRNSVRQRRWA*LVSLLTVTEKHGGI
Trigger: GATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 90 bp GGTGGGCTGACAATCCCTGCCTTTCACACCAGCAGTTCTGTCTGCTaGGAGCACGGCACATTCCCCACCACACCTAGGAACTGCACTACA +
Preference number: 1 (lower is better)
Translates to: GGLTIPAFHTSSSVC*EHGTFPTTPRNCTT
Trigger: TGTAGTGCAGTTCCTAGGTGTGGTGGGGAATGTGCCGTGCTCTCAGCAGACAGAACTGCTGGTGTGAAAGGCAGGGATTGTCAGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR GCA 90 bp GACGCTTTGGTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTaGTGGGGAGATCCTAGGCCTGGTCCTGCTTCCTCCCAGCCTCAG +
Preference number: 1 (lower is better)
Translates to: DALVHTIQGRTLVCI*WGDPRPGPASSQPQ
Trigger: CTGAGGCTGGGAGGAAGCAGGACCAGGCCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAACCAAAGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp AAGAAAGTGAATCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATaGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTGGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: KKVNLVMGKRFVESG*ATAIWPPALPAGAR
Trigger: CCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGATTCACTTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp GCTTTGGTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTaGGGAGATCCTAGGCCTGGTCCTGCTTCCTCCCAGCCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: ALVHTIQGRTLVCIC*GDPRPGPASSQPQV
Trigger: CACCTGAGGCTGGGAGGAAGCAGGACCAGGCCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAACCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 90 bp AGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTaGGGCATTGTGACAGAGAGCCAGCACCGAGGGGAAGGACCAGCC +
Preference number: 1 (lower is better)
Translates to: RISSWDGCRPGFHVF*GIVTESQHRGEGPA
Trigger: GGCTGGTCCTTCCCCTCGGTGCTGGCTCTCTGTCACAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp TTGCCCTTAGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATaGCACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTT +
Preference number: 1 (lower is better)
Translates to: LPLAETGCFSSCPQG*HCPLAEGVTRTSQL
Trigger: AAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCTAAGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 90 bp AGACCTAGGGGGACTCTAGGAGGACCCAAAGGACACTCTGGCCTTTaGAGTAGCTGGATGTTGTCCAGAACATCTTGGCTGTACCAGACC +
Preference number: 1 (lower is better)
Translates to: RPRGTLGGPKGHSGL*SSWMLSRTSWLYQT
Trigger: GGTCTGGTACAGCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGGGTCCTCCTAGAGTCCCCCTAGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 90 bp CTAACCTATGTGGCTGCTAGCTTGAAAGATATGGGAAGGTTGGGCTaGCATCACACCCTCCTTAGGGCAGGGAGAAGCCACTTGACTTCC +
Preference number: 1 (lower is better)
Translates to: LTYVAASLKDMGRLG*HHTLLRAGRSHLTS
Trigger: GGAAGTCAAGTGGCTTCTCCCTGCCCTAAGGAGGGTGTGATGCCAGCCCAACCTTCCCATATCTTTCAAGCTAGCAGCCACATAGGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CAA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTaGGTGCAAGGCAGCTGTGAGGAGCTAGGCTGCGCGAGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: RPHSRGLRTPSWVGP*VQGSCEELGCARPA
Trigger: AGCAGGCCTCGCGCAGCCTAGCTCCTCACAGCTGCCTTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGCCCGCACTGCCCGCTaGTGCCAGGAGTACGAGCGG +
Preference number: 2 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAARTAR*CQEYER
Trigger: CCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR GCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTCTGGCCGCCCGCACTaGCCGCTGGTGCCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSASGRPH*PLVPGV
Trigger: TACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGA...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTCTGCGCGAGGCCTGCTaGGCCCACGGCGCCGACTCA +
Preference number: 2 (lower is better)
Translates to: HLGTALQRWEGRFQNRRILREAC*AHGADS
Trigger: TGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGAACACCGAGCTGGGTaGGGCCCTTGGTGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAEHRAG*GPWCKA
Trigger: TGCCTTGCACCAAGGGCCCCACCCAGCTCGGTGTTC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTCTTCCCCCTTCCCCCTaGGCCCACTGGTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSLPPSP*AHWSPG
Trigger: GCCTGGAGACCAGTGGGCCCAGGGGGAAGGGGGAAG...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR GCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCCCTGCCTCATACCCCTaGGTCCTCACTCCCGAGGTC +
Preference number: 2 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSPASYP*VLTPEV
Trigger: GACCTCGGGAGTGAGGACGCAGGGGTATGAGGCAGG...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR GCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGGCACACCCTCTCCCTaGCTCATACCCCTGCGTCCT +
Preference number: 2 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGGTPSP*LIPLRP
Trigger: AGGACGCAGGGGTATGAGGCAGGGAGAGGGTGTGCC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTTCCCCCTGGGCCCACTaGTCTCCAGGCAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: HLGTALQRWEGRFQNRRISPWAH*SPGRPS
Trigger: GCTGGGTCTGCCTGGAGACCAGTGGGCCCAGGGGGA...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGCCACCCAGCGATGTTaGTCAACTCCATCCACCAGG +
Preference number: 2 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAATQRC*STPSTR
Trigger: CCTGGTGGATGGAGTTGACCAACATCGCTGGGTGGC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR TCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTGCCCCAGCCCCACCATaGGCCTCCGCTTTCCTAACC +
Preference number: 2 (lower is better)
Translates to: HLGTALQRWEGRFQNRRIAPAPP*ASAFLT
Trigger: GGTTAGGAAAGCGGAGGCTCATGGTGGGGCTGGGGC...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR TCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTGGCCAGCAGCCACATTaGTGTAGGGAGGGTACTGGG +
Preference number: 2 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSGQQPH*CREGTG
Trigger: CCCAGTACCCTCCCTACATCAATGTGGCTGCTGGCC...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTCTCAGAACACCGAGCTaGGTGGGGCCCTTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSLRTPS*VGPLVQ
Trigger: TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAG...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCGCTCTGAAGCAGGACTaGGTTGAGCTGACTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSALKQD*VELTGA
Trigger: AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGC...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTTGTGGAATCAGGATaGGCCACAGCAATCTGGCCG +
Preference number: 2 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAFVESG*ATAIWP
Trigger: CGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAA...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR GCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCCGCACTGCCCGCTGGTaGCAGGAGTACGAGCGGCAC +
Preference number: 2 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGRTARW*QEYERH
Trigger: GTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCG...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCCCCCTGCCAGAAACCTaGGGACACGTCGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGPLPET*GHVAPG
Trigger: GCCAGGGGCGACGTGTCCCCAGGTTTCTGGCAGGGG...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCTTGTCCAGAACATCTTaGCTGTACCAGACCCCTGGG +
Preference number: 2 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSLSRTS*LYQTPG
Trigger: CCCAGGGGTCTGGTACAGCCAAGATGTTCTGGACAA...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGGCTGGGTGGGGCCCTTaGTGCAAGGCAGCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALAGWGP*CKAAVR
Trigger: CCTCACAGCTGCCTTGCACCAAGGGCCCCACCCAGC...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTTGGGAAAGAGGTTTGTaGAATCAGGATGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: HPGLVLALKQDWVELTGAWERGL*NQDGPQ
Trigger: CTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCA...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR GCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTTTAGCAGAGACAGGCTaGTTTTCCTCCTGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSLAETG*FSSCPQ
Trigger: TTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCTAA...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGCCTCCCAGCCTCAGGTaGGCTGACAATCCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRPPSLR*ADNPCL
Trigger: AAGGCAGGGATTGTCAGCCCACCTGAGGCTGGGAGG...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CAA 90 bp GCTTTCCTAACCTATGTGGCTGCTAGCTTGAAAGATATGGGAAGGTaGGGCTGGCATCACACCCTCCTTAGGGCAGGGAGAAGCCACTTG +
Preference number: 2 (lower is better)
Translates to: AFLTYVAASLKDMGR*GWHHTLLRAGRSHL
Trigger: CAAGTGGCTTCTCCCTGCCCTAAGGAGGGTGTGATGCCAGCCCAACCTTCCCATATCTTTCAAGCTAGCAGCCACATAGGTTAGGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR TCA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGCCCCCACACGGCAACTaGTGCCTTACACCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: GKELAVGTVVGLGSMSFEPPHGN*CLTPSP
Trigger: TGGGCTAGGTGTAAGGCATCAGTTGCCGTGTGGGGG...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCATGGGAAGGTTGGGCTaGCATCACACCCTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGMGRLG*HHTLLR
Trigger: CCTAAGGAGGGTGTGATGCCAGCCCAACCTTCCCAT...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGAAGATATGGGAAGGTTaGGCTGGCATCACACCCTCC +
Preference number: 2 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRKIWEG*AGITPS
Trigger: GGAGGGTGTGATGCCAGCCCAACCTTCCCATATCTT...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR TCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCAGGACTGGGTTGAGCTaGCTGGGGCTGTGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: MIILIIKVLLGFLRRAVARTGLS*LGLCPK
Trigger: CTTGGGGCACAGCCCCAGTCAGCTCAACCCAGTCCT...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR TCA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGTCTTTCTGCTCCCTATaGCTGGGATACCCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: GKELAVGTVVGLGSMSFESFCSL*LGYPLL
Trigger: AAGCAGAGGGTATCCCAGTCATAGGGAGCAGAAAGA...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR GCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCACACTTGTTTGCATCTaGTGGGGAGATCCTAGGCCT +
Preference number: 2 (lower is better)
Translates to: MIILIIKVLLGFLRRAVATLVCI*WGDPRP
Trigger: AGGCCTAGGATCTCCCCAGCAGATGCAAACAAGTGT...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR GCA 72 bp GGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTGGTaGCAGGAGTACGAGCGGCACACCCTCTCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: GHSNLAARTARW*QEYERHTLSLP
Trigger: AGGCAGGGAGAGGGTGTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp ATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTaGTGCCAGGAGTACGAGCGGCACACCCTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: MGHSNLAARTAR*CQEYERHTLSL
Trigger: CAGGGAGAGGGTGTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR GCA 72 bp AATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTaGCCGCTGGTGCCAGGAGTACGAGCGGCACACCCT +
Preference number: 3 (lower is better)
Translates to: NQDGPQQSGRPH*PLVPGVRAAHP
Trigger: AGGGTGTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp CACACGGCAACTGATGCCTTACACCTAGCCCACCTCTaGGGCCCCAGCCCCACCATGAGCCTCCGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: HTATDALHLAHL*GPSPTMSLRFP
Trigger: AGGAAAGCGGAGGCTCATGGTGGGGCTGGGGCCCCAGAGGTGGGCTAGGTGTAAGGCATCAGTTGCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp AAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTaGCCGCCCGCACTGCCCGCTGGTGCCAGGAGTACG +
Preference number: 3 (lower is better)
Translates to: KRFVESGWATAI*PPALPAGARST
Trigger: CGTACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp GGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTaGTCAACTCCATCCACCAGGTCCCCCACAGGCTTC +
Preference number: 3 (lower is better)
Translates to: GFLRRAVATQRC*STPSTRSPTGF
Trigger: GAAGCCTGTGGGGGACCTGGTGGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp GTGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTaGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAG +
Preference number: 3 (lower is better)
Translates to: VATGRNSVRQRR*AWLVSLLTVTE
Trigger: CTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CAA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCCCAAAACCGGAGGATTaGCCCTTAGCAGAGACAGGC +
Preference number: 3 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSPKPED*PLAETG
Trigger: GCCTGTCTCTGCTAAGGGCAAATCCTCCGGTTTTGG...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CAA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATGTTGTCCAGAACATCTaGGCTGTACCAGACCCCTGG +
Preference number: 3 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHVVQNI*AVPDPW
Trigger: CCAGGGGTCTGGTACAGCCAAGATGTTCTGGACAAC...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 72 bp GTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGTaGCAGAGAGCCAGCACCGAGGGGAAGGACCAGCCC +
Preference number: 3 (lower is better)
Translates to: VVGLGSMSFEAL*QRASTEGKDQP
Trigger: GGGCTGGTCCTTCCCCTCGGTGCTGGCTCTCTGTCACAATGCCTCAAAAGACATGGAACCCAGGCCTACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp GCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTaGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: AFPPVPKDGTVP*LRVSHELLSFP
Trigger: GGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp GCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATaGCACTGTCCCTTGGCTGAGGGTGTCACACGAACT +
Preference number: 3 (lower is better)
Translates to: AETGCFSSCPQG*HCPLAEGVTRT
Trigger: AGTTCGTGTGACACCCTCAGCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CAA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTAAAGATATGGGAAGGTaGGGCTGGCATCACACCCTC +
Preference number: 3 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSKDMGR*GWHHTL
Trigger: GAGGGTGTGATGCCAGCCCAACCTTCCCATATCTTT...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 72 bp TTTCTGCTCCCTATGACTGGGATACCCTCTGCTTCATaGGCCTCATGGGCAGCCAGAGACCTAGGGGGACTC +
Preference number: 3 (lower is better)
Translates to: FLLPMTGIPSAS*ASWAARDLGGL
Trigger: GAGTCCCCCTAGGTCTCTGGCTGCCCATGAGGCTCATGAAGCAGAGGGTATCCCAGTCATAGGGAGCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp AATCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATaGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCT +
Preference number: 3 (lower is better)
Translates to: NLVMGKRFVESG*ATAIWPPALPA
Trigger: AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp GTGGCTGCTAGCTTGAAAGATATGGGAAGGTTGGGCTaGCATCACACCCTCCTTAGGGCAGGGAGAAGCCAC +
Preference number: 3 (lower is better)
Translates to: VAASLKDMGRLG*HHTLLRAGRSH
Trigger: GTGGCTTCTCCCTGCCCTAAGGAGGGTGTGATGCCAGCCCAACCTTCCCATATCTTTCAAGCTAGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp CACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTaGGGAGATCCTAGGCCTGGTCCTGCTTCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: HTIQGRTLVCIC*GDPRPGPASSQ
Trigger: CTGGGAGGAAGCAGGACCAGGCCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 72 bp ACAATCCCTGCCTTTCACACCAGCAGTTCTGTCTGCTaGGAGCACGGCACATTCCCCACCACACCTAGGAAC +
Preference number: 3 (lower is better)
Translates to: TIPAFHTSSSVC*EHGTFPTTPRN
Trigger: GTTCCTAGGTGTGGTGGGGAATGTGCCGTGCTCTCAGCAGACAGAACTGCTGGTGTGAAAGGCAGGGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 72 bp AGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTaGGGCATTGTGACAGAGAGCCAGCACCGAGGGGAA +
Preference number: 3 (lower is better)
Translates to: SWDGCRPGFHVF*GIVTESQHRGE
Trigger: TTCCCCTCGGTGCTGGCTCTCTGTCACAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR GCA 72 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTaGTGGGGAGATCCTAGGCCTGGTCCTGCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VHTIQGRTLVCI*WGDPRPGPASS
Trigger: GGAGGAAGCAGGACCAGGCCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR GCA 72 bp CTTGCTCTTTCTGCTCCCTATGACTGGGATACCCTCTaGTTCATGAGCCTCATGGGCAGCCAGAGACCTAGG +
Preference number: 3 (lower is better)
Translates to: LALSAPYDWDTL*FMSLMGSQRPR
Trigger: CCTAGGTCTCTGGCTGCCCATGAGGCTCATGAAGCAGAGGGTATCCCAGTCATAGGGAGCAGAAAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp ACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTaGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCAT +
Preference number: 3 (lower is better)
Translates to: TGRNSVRQRRWA*LVSLLTVTEKH
Trigger: ATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR TCA 72 bp GGGACTCTAGGAGGACCCAAAGGACACTCTGGCCTTTaGAGTAGCTGGATGTTGTCCAGAACATCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: GTLGGPKGHSGL*SSWMLSRTSWL
Trigger: CAGCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGGGTCCTCCTAGAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CCA 72 bp TTCCTTAACCCACTTGCTCTTTCTGCTCCCTATGACTaGGATACCCTCTGCTTCATGAGCCTCATGGGCAGC +
Preference number: 3 (lower is better)
Translates to: FLNPLALSAPYD*DTLCFMSLMGS
Trigger: GCTGCCCATGAGGCTCATGAAGCAGAGGGTATCCCAGTCATAGGGAGCAGAAAGAGCAAGTGGGTTAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CAA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCCAAGCCCCTGACGCTTaGGTTCACACAATTCAGGGG +
Preference number: 3 (lower is better)
Translates to: MIILIIKVLLGFLRRAVAQAPDA*VHTIQG
Trigger: CCCCTGAATTGTGTGAACCAAAGCGTCAGGGGCTTG...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR-3UTR CAA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGTATGTGGCTGCTAGCTaGAAAGATATGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GKELAVGTVVGLGSMSFEYVAAS*KDMGRL
Trigger: CAACCTTCCCATATCTTTCAAGCTAGCAGCCACATA...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCAGTGGAAGGCGCGGGTaGTGCGGGAAGCGACGGGGC +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGSGRRG*CGKRRG
Trigger: GCCCCGTCGCTTCCCGCAGCACCCGCGCCTTCCACT...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCGCCTGCAGGCCCAGCTaGGCTGCGTCCTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGACRPS*AASCQP
Trigger: GGGCTGACAGGACGCAGCCCAGCTGGGCCTGCAGGC...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCCGAGCGGCGACCAGCTaGTCTCTCGGCCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGRAATS*SLGRPF
Trigger: AAAGGGGCGGCCGAGAGAGCAGCTGGTCGCCGCTCG...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCCTTCCCCCTTCCCCCTaGGCCCACTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGLPPSP*AHWSPG
Trigger: GCCTGGAGACCAGTGGGCCCAGGGGGAAGGGGGAAG...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCCCTCCTGCAGCAAGGTaGAGCCAGGAAGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGPPAAR*SQEASV
Trigger: CACAGAGGCTTCCTGGCTGCACCTTGCTGCAGGAGG...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCTGCGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTCCCGGAGGCAGCGTGTaGTCTGCCAGGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PASSLPRSQNTELGGALGPGGSV*SARAGG
Trigger: ACCGCCAGCCCTGGCAGAGCACACGCTGCCTCCGGG...ACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACGCGACGGGGCGGCTGTaGTGGCTGGCTCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHATGRL*WLAPLP
Trigger: AGGCAGCGGAGCCAGCCACCACAGCCGCCCCGTCGC...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCGCTCTGAAGCAGGACTaGGTTGAGCTGACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGALKQD*VELTGA
Trigger: AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGC...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAACAGGCCCAGCTGGGCTaGGTCCTGTCAGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQQAQLG*VLSALV
Trigger: GACGAGGGCTGACAGGACGCAGCCCAGCTGGGCCTG...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCTGCGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTTGTGGCTGCTGCGGCTaGGTCTGTGGCGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PASSLPRSQNTELGGALGCGCCG*VCGGCC
Trigger: GCAACAGCCGCCACAGACGCAGCCGCAGCAGCCACA...ACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGGGGGTTCTCCGCCGTaGCCGGAGGCAGCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAGGSPP*PEAACA
Trigger: AGCACACGCTGCCTCCGGGCACGGCGGAGAACCCCC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCTGCGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTCCGGGCAGGCACTTGTaGCGCAGCAGCTCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PASSLPRSQNTELGGALGPGRHL*RSSSAD
Trigger: ATCTGCCGAGCTGCTGCGGCACAAGTGCCTGCCCGG...ACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAATCTGGCCGCCCGCACTaGCCGCTGGTGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQSGRPH*PLVPGV
Trigger: TACTCCTGGCACCAGCGGGCAGTGCGGGCGGCCAGA...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCTTGCAGCGGAACAGGTaGTGCTCGCCCGAGTGCGCG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPLQRNR*CSPECA
Trigger: CGCGCACTCGGGCGAGCACCACCTGTTCCGCTGCAA...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CAA 72 bp TCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTaGGTGCAAGGCAGCTGTGAGGAGCTAGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: SRGLRTPSWVGP*VQGSCEELGCA
Trigger: CGCGCAGCCTAGCTCCTCACAGCTGCCTTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CCTGCGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTAGGACTGGGTTGAGCTaGCTGGGGCTGTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PASSLPRSQNTELGGALGRTGLS*LGLCPK
Trigger: CTTGGGGCACAGCCCCAGTCAGCTCAACCCAGTCCT...ACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACGGCTCTCCTGCTGCCTaGAGGGGTGCGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHGSPAA*RGACCG
Trigger: CCCACAACACGCACCCCTGCAGGCAGCAGGAGAGCC...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGCCAGCTGGTGCTTCTaGAGGGCCGACGCGCGCTTG +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAASWCF*RADARL
Trigger: CAAGCGCGCGTCGGCCCTGCAGAAGCACCAGCTGGC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCGGCGTTCGCAAAGCGTaGAGCGCAGGGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPGVRKA*SAGASL
Trigger: CAGAGAAGCCCCTGCGCTGCACGCTTTGCGAACGCC...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCACACACTTGAACTGCTaGTCGCGGGCGTGCACGCCC +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPTHLNC*SRACTP
Trigger: GGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGT...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTGCGGCGGCGGCACTGTaGTGCGCGCTGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSAAAAL*CALCSC
Trigger: GCAGGAGCACAGCGCGCAGCACAGTGCCGCCGCCGC...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCATGGTGGCATCTCCCTaGCCCTCAGGGCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPMVASP*PSGPLV
Trigger: CACCAAGGGCCCTGAGGGGCAGGGAGATGCCACCAT...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATCTGCGCGAGGCCTGCTaGGCCCACGGCGCCGACTCA +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHLREAC*AHGADS
Trigger: TGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACGGGACACGTCGCCCCTaGCTAGAGCAGACGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHGTRRP*LEQTER
Trigger: CCTCTCCGTCTGCTCTAGCCAGGGGCGACGTGTCCC...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCGGTCCGAGGGCCGCTTaGAGGCCTTCTGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSGPRAA*RPSGTR
Trigger: GCGAGTGCCAGAAGGCCTTCAAGCGGCCCTCGGACC...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCACTTTCAGAGTCAGATaGAACCCACTTCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGTFRVR*NPLPGS
Trigger: GGAACCTGGAAGTGGGTTGCATCTGACTCTGAAAGT...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTGGTGGCTGTGGCTGCTaGGGCTGCGTCTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSGGCGC*GCVCGG
Trigger: GCCGCCACAGACGCAGCCGCAGCAGCCACAGCCACC...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGCCTGGCTCTCCTGCTaGCTGCAGGGGTGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAAWLSC*LQGCVL
Trigger: CAACACGCACCCCTGCAGGCAGCAGGAGAGCCAGGC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTCTTGGCGTGCACGGGTaGTGCAGCAGCTCCGACGAC +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPALGVHG*CSSSDD
Trigger: GTCGTCGGAGCTGCTGCAGCACCCGTGCACGCCAAG...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCCAGTGGGCCAGCTGGTaGTTCTGCAGGGCCGACGCG +
Preference number: 4 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPQWASW*FCRADA
Trigger: CGCGTCGGCCCTGCAGAAGCACCAGCTGGCCCACTG...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACGCCGGATCGCAGCGGTaGTGCACGAACTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHAGSQR*CTNSEE
Trigger: CTCTTCCGAGTTCGTGCAGCACCGCTGCGATCCGGC...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACGCGTGCACGCCCTGGTaGTTGTTGAGATGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHACTPW*LLRCSR
Trigger: GCGGGAGCATCTCAACAAGCACCAGGGCGTGCACGC...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCGCACAGAAGAGGGGCTaGTCAGACAGCCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPAQKRG*SDSPSQ
Trigger: CTGACTCGGGCTGTCTGACCAGCCCCTCTTCTGTGC...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCCACACACGCCACATTTaGGGCCTGGCTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPHTRHI*GLALLL
Trigger: CAGCAGGAGAGCCAGGCCCCAAATGTGGCGTGTGTG...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCGGTAGAGCAGGTGGCTaGGCTGCCCAAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPGRAGG*AAQSPS
Trigger: AGAAGGGCTTTGGGCAGCCCAGCCACCTGCTCTACC...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCTCCCCCTGGGCCCACTaGTCTCCAGGCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSSPWAH*SPGRPS
Trigger: GCTGGGTCTGCCTGGAGACCAGTGGGCCCAGGGGGA...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTCCTGTTCAGCAGGGGTaGCAGTGGAAGGCGCGGGTG +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGAPVQQG*QWKARV
Trigger: CACCCGCGCCTTCCACTGTCACCCCTGCTGAACAGG...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGGCACAGGTCGCACTTaGAGGGCCGCTCGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGGTGRT*RAARRC
Trigger: ACAGCGCCGAGCGGCCCTTCAAGTGCGACCTGTGCC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CCTGCGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGTGCCGCTGCAGGTCTaGCGCGTACTTGAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PASSLPRSQNTELGGALGVPLQV*RVLEAF
Trigger: AAACGCTTCAAGTACGCGTCAGACCTGCAGCGGCAC...ACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAACCCCCACACGGCAACTaGTGCCTTACACCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQPPHGN*CLTPSP
Trigger: TGGGCTAGGTGTAAGGCATCAGTTGCCGTGTGGGGG...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTGAAGCAGGACTGGGTTaGGCTGACTGGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPAEAGLG*ADWGCA
Trigger: GGCACAGCCCCAGTCAGCTCAACCCAGTCCTGCTTC...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATTCCCCTGGCTTGGTCTaGAGCACCCCCTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHSPGLV*STPCPP
Trigger: GGGTGGGCAGGGGGTGCTGCAGACCAAGCCAGGGGA...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTTGCGGTGGCTGTGGCTaGTGCGGCTGCGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSCGGCG*CGCVCG
Trigger: GCCACAGACGCAGCCGCAGCAGCCACAGCCACCGCA...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAACTGGCTGCAGGAGGATaGCATAGACGGCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQLAAGG*HRRHSP
Trigger: TGGGCTGTGCCGTCTATGGCATCCTCCTGCAGCCAG...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTTGGTGCTCGCCCGAGTaGGCGTACATGTGGCGCACC +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGAWCSPE*AYMWRT
Trigger: GGTGCGCCACATGTACGCGCACTCGGGCGAGCACCA...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGGCGTGCACGGGTGCTaGAGCAGCTCCGACGACTCC +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGGVHGC*SSSDDS
Trigger: GGAGTCGTCGGAGCTGCTGCAGCACCCGTGCACGCC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTTGTGTGCGCTCATGCTaGCGCAGGTCCGAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSCVRSC*RRSEGR
Trigger: GCGGCCCTCGGACCTGCGGCAGCATGAGCGCACACA...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCCCTCGGTCTTGTGTGTaGGCCGGTGGCGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAPRSCV*AGGASV
Trigger: CACTGATGCGCCACCGGCGCACACACAAGACCGAGG...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACGGATCGCAGCGGTGCTaGACGAACTCGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHGSQRC*TNSEEE
Trigger: CTCCTCTTCCGAGTTCGTGCAGCACCGCTGCGATCC...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATGCGGCGGCACTGTGCTaGGCGCTGTGCTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHAAALC*ALCSCN
Trigger: GTTGCAGGAGCACAGCGCGCAGCACAGTGCCGCCGC...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGGCACACCCTCTCCCTaGCTCATACCCCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAGTPSP*LIPLRP
Trigger: AGGACGCAGGGGTATGAGGCAGGGAGAGGGTGTGCC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCTCTGCCTACAGGACATaGGGGCTCTTCAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPSAYRT*GLFKGG
Trigger: CCCTCCCTTGAAGAGCCCCCATGTCCTGTAGGCAGA...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCCTGCAGGCCGGGGTCTaGCTGCAGGAGGATGCCATA +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSALQAGV*LQEDAI
Trigger: TATGGCATCCTCCTGCAGCCAGACCCCGGCCTGCAG...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGCCACATTTGGGGCCTaGCTCTCCTGCTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAATFGA*LSCCLQ
Trigger: CTGCAGGCAGCAGGAGAGCCAGGCCCCAAATGTGGC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTTGGCCCGCCAGACACTaGTGCTCATGCGGACTGGAC +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPAWPARH*CSCGLD
Trigger: GTCCAGTCCGCATGAGCACCAGTGTCTGGCGGGCCA...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAACCACTGTGGGAGCTGTaGTGCTGTGCCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQPLWEL*CCASEV
Trigger: CACCTCACTGGCACAGCACCACAGCTCCCACAGTGG...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACCCTCCCAGCCTCAGGTaGGCTGACAATCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHPPSLR*ADNPCL
Trigger: AAGGCAGGGATTGTCAGCCCACCTGAGGCTGGGAGG...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCGCCACCCAGCGATGTTaGTCAACTCCATCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPATQRC*STPSTR
Trigger: CCTGGTGGATGGAGTTGACCAACATCGCTGGGTGGC...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGCCAGGAAGCCTCTGTaGTCACTCCGCAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAARKPL*SLRKGE
Trigger: CTCCCCTTTGCGGAGTGATCACAGAGGCTTCCTGGC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTGAAGGTGGGCTTCTCTaGGCGCCTGTAGGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGAEGGLL*APVGPL
Trigger: CAGCGGACCTACAGGCGCTCAGAGAAGCCCACCTTC...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGGTGCAAGGCAGCTGTaGGGAGCTAGGCTGCGCGAG +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGGARQL*GARLRE
Trigger: CTCGCGCAGCCTAGCTCCTCACAGCTGCCTTGCACC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGCCCCAGCCCCACCATaGGCCTCCGCTTTCCTAACC +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGAPAPP*ASAFLT
Trigger: GGTTAGGAAAGCGGAGGCTCATGGTGGGGCTGGGGC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATGGAGGGTCCCAGCAGTaGCGGGGAGACTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHGGSQQ*RGDSAF
Trigger: GAAGGCAGAGTCTCCCCGGCACTGCTGGGACCCTCC...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTGGCTTCTGCTCAGCCTaGACGCACTGGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGAGFCSA*THWCSS
Trigger: GCTGGAGCACCAGTGCGTGCAGGCTGAGCAGAAGCC...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCTTGTGGTGCACCAGGTaGGACGACTGGCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPLWCTR*DDWLKL
Trigger: AAGCTTCAGCCAGTCGTCGCACCTGGTGCACCACAA...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTCAGCGGAACAGGTGGTaGTCGCCCGAGTGCGCGTAC +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSQRNRW*SPECAY
Trigger: GTACGCGCACTCGGGCGAGCACCACCTGTTCCGCTG...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGCTCCCCACTTGGCGTaGACGGGTGCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGAPHLA*TGAAAA
Trigger: AGCTGCTGCAGCACCCGTGCACGCCAAGTGGGGAGC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTTGCCAGGGCTGGCGGTaGCTCTGCATGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSCQGWR*LCMVLR
Trigger: CCTCAGCACCATGCAGAGCCACCGCCAGCCCTGGCA...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTGGCGGCTGTGGTGGCTaGCTCCGCTGCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLGTALQRWEGRFQNRRIGGCGG*LRCLSW
Trigger: CCAGCTGAGGCAGCGGAGCCAGCCACCACAGCCGCC...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATGCACAGTGGGCCAGCTaGTGCTTCTGCAGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHAQWAS*CFCRAD
Trigger: GTCGGCCCTGCAGAAGCACCAGCTGGCCCACTGTGC...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTTCTGCCGCCGCACAGTaGGCCAGCTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSSAAAQ*ASWCFC
Trigger: GCAGAAGCACCAGCTGGCCCACTGTGCGGCGGCAGA...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCTGCGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCGTTTCTCGCAGTCTaGGCACTTGAGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PASSLPRSQNTELGGALGAFLAV*ALEWLL
Trigger: GAGAAGCCACTCAAGTGCCCAGACTGCGAGAAACGC...ACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTGCTGGGTGGGGCCCTTaGTGCAAGGCAGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSAGWGP*CKAAVR
Trigger: CCTCACAGCTGCCTTGCACCAAGGGCCCCACCCAGC...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTCAGAGGAGGTGGGCGTaGCTGGTCAGCCTTCTTACG +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPAQRRWA*LVSLLT
Trigger: CGTAAGAAGGCTGACCAGCCACGCCCACCTCCTCTG...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCGTCAGACAGAGGAGGTaGGCGTGGCTGGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAVRQRR*AWLVSL
Trigger: AAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGAC...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CAA 72 bp GGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTaGGTCAACTCCATCCACCAGGTCCCCCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLPKEGRSHPAM*VNSIHQVPHRL
Trigger: AAGCCTGTGGGGGACCTGGTGGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACCTCTGCCTTCCCCAGTaGTCCGTTCACTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHLCLPQ*SVHFVA
Trigger: TGCCACAAAGTGAACGGATCACTGGGGAAGGCAGAG...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCAGGTGCGCCAGGTCGTaGCCACACACGCCACATTTG +
Preference number: 4 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSRCARS*PHTPHL
Trigger: CAAATGTGGCGTGTGTGGTCACGACCTGGCGCACCT...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAACACATAGGCCGCATTTaGAGGGCTCCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQHIGRI*RAPRSC
Trigger: ACAAGACCGAGGAGCCCTTCAAATGCGGCCTATGTG...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp TCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACACGGCAACTGATGCCGGCACACGGGGCACTTaGAGAGAGTCTCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SPGLRLKAGLLPHTATDAGTRGT*RESRGC
Trigger: ACACCCTCGAGACTCTCTTCAAGTGCCCCGTGTGCC...GGCATCAGTTGCCGTGTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTGGCCAGCAGCCACATTaGTGTAGGGAGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGAGQQPH*CREGTG
Trigger: CCCAGTACCCTCCCTACATCAATGTGGCTGCTGGCC...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCACCCACTGTTTTGTTTaGTTTTTCTGGCATGAATGG +
Preference number: 4 (lower is better)
Translates to: LREACWAHGADSGQAGRGTHCFV*FFWHEW
Trigger: CCATTCATGCCAGAAAAAGCAAACAAAACAGTGGGT...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAACAGACTACAAGGCTCTaGCTACAGGACATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQQTTRL*LQDMGA
Trigger: AGCCCCCATGTCCTGTAGGCAGAGCCTTGTAGTCTG...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCCCCGCCAGACACTGGTaGTCATGCGGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGPARHW*SCGLDR
Trigger: CCTGTCCAGTCCGCATGAGCACCAGTGTCTGGCGGG...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGCTCGGAGCTGTGCGTaGGCTTGTGGTGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGARSCA*ACGAPG
Trigger: ACCTGGTGCACCACAAGCGCACGCACAGCTCCGAGC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTCATACACACTTGAACTaGTGCTCGCGGGCGTGCACG +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPAHTHLN*CSRACT
Trigger: CGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATG...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCACCACACCTAGGAACTaGACTACAAAGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPTTPRN*TTKVGG
Trigger: CCCTCCCACCTTTGTAGTGCAGTTCCTAGGTGTGGT...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCGGTGCTCATGCGGACTaGACAGGTGCGCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGGAHAD*TGAPGR
Trigger: ACGACCTGGCGCACCTGTCCAGTCCGCATGAGCACC...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACAGGGCTTTTGGCAGATaGGGCAGCTGTAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHRAFGR*GSCRAC
Trigger: ACAAGCCCTACAGCTGCCCCATCTGCCAAAAGCCCT...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTAGGCAGCAGGTTGCTTaGGCAAGCAGGTACCACTCT +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPARQQVA*ASRYHS
Trigger: AGAGTGGTACCTGCTTGCTCAAGCAACCTGCTGCCT...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTGGTGCGACGACTGGCTaGAGCTTTTGTCACACAGCG +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGAGATTG*SFCHTA
Trigger: CGCTGTGTGACAAAAGCTTCAGCCAGTCGTCGCACC...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGGTGGCTGGCTCCGCTaGCTCAGCTGGCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VMGKRFVESGWATAIWPPGGWLR*LSWLVG
Trigger: ACCTACAAGCCAGCTGAGGCAGCGGAGCCAGCCACC...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTTGGTGCTTGTTGAGATaGTCCCGCTGCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPAWCLLR*SRCLKA
Trigger: GGCCTTCAAGCAGCGGGAGCATCTCAACAAGCACCA...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCTTAGCAGAGACAGGCTaGTTTTCCTCCTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPLAETG*FSSCPQ
Trigger: TTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCTAA...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGCCTCGAGGCCCGGCCTaGGCCGCCCAGAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRPRGPA*AAQKLK
Trigger: CTTGAGCTTCTGGGCGGCCCAGGCCGGGCCTCGAGG...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATCAGAGAGGGGGAAGGTaGGCTTCTCTGAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHQRGGR*ASLSAC
Trigger: ACAGGCGCTCAGAGAAGCCCACCTTCCCCCTCTCTG...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAAACCAGGTGCGACGACTaGCTGAAGCTTTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQTRCDD*LKLLSH
Trigger: GTGTGACAAAAGCTTCAGCCAGTCGTCGCACCTGGT...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTATGGGAAGGTTGGGCTaGCATCACACCCTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPAMGRLG*HHTLLR
Trigger: CCTAAGGAGGGTGTGATGCCAGCCCAACCTTCCCAT...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCTCCTGTCCCCAAGGATaGCACTGTCCCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPSCPQG*HCPLAE
Trigger: CTCAGCCAAGGGACAGTGCCATCCTTGGGGACAGGA...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACACGGCAACTGATGCCGACAGAGAAGCATGGTaGCATCTCCCTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPGLRLKAGLLPHTATDADREAW*HLPAPQ
Trigger: CTGAGGGGCAGGGAGATGCCACCATGCTTCTCTGTC...GGCATCAGTTGCCGTGTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCCACTTTGTGGCAGCATaGGGTAATGCCAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSHFVAA*GNASER
Trigger: CCTCTCGCTGGCATTACCTCATGCTGCCACAAAGTG...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTGCTCCGACAGGTGCTTaGAGGGCTTTTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSAPTGA*RAFGRW
Trigger: CCATCTGCCAAAAGCCCTTCAAGCACCTGTCGGAGC...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTTGTGCCCCAAGCCCCTaGCGCTTTGGTTCACACAAT +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGACAPSP*RFGSHN
Trigger: ATTGTGTGAACCAAAGCGTCAGGGGCTTGGGGCACA...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTGAGAGCTCCGACAGGTaGTTGAAGGGCTTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGAESSDR*LKGFWQ
Trigger: CTGCCAAAAGCCCTTCAAGCACCTGTCGGAGCTCTC...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCTTCTGCAACTCGCACACGTTaGAGCGGAACAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRKELSQTEEVGVAGQPSATRTR*SGTGGA
Trigger: AGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGC...AGAAGGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATCGCATCAGTGCGTACTaGTGCTTGAAGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHRISAY*CLKPMG
Trigger: CCCCATGGGCTTCAAGCAGCAGTACGCACTGATGCG...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCGCGCAGGGGCTTCTCTaGCGCCGCACAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGAQGLL*RRTVGQ
Trigger: CTGGCCCACTGTGCGGCGGCAGAGAAGCCCCTGCGC...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTCCTGCCTCATACCCCTaGGTCCTCACTCCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: HLGTALQRWEGRFQNRRIPASYP*VLTPEV
Trigger: GACCTCGGGAGTGAGGACGCAGGGGTATGAGGCAGG...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACACGGCAACTGATGCCAGACACTGTGTGCACTaGAATGAGCGGTCATGGCCC +
Preference number: 4 (lower is better)
Translates to: SPGLRLKAGLLPHTATDARHCVH*NERSWP
Trigger: GGGCCATGACCGCTCATTCCAGTGCACACAGTGTCT...GGCATCAGTTGCCGTGTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTAGCAGGTCAGTGGCCTaGTGGAAGATCTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPASRSVA*WKILRH
Trigger: GTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCT...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCGCCCGCACTGCCCGCTaGTGCCAGGAGTACGAGCGG +
Preference number: 4 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGARTAR*CQEYER
Trigger: CCGCTCGTACTCCTGGCACCAGCGGGCAGTGCGGGC...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACTGGGAAAGAGGTTTGTaGAATCAGGATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHWERGL*NQDGPQ
Trigger: CTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCA...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCCCCCTGCCAGAAACCTaGGGACACGTCGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLAPLPET*GHVAPG
Trigger: GCCAGGGGCGACGTGTCCCCAGGTTTCTGGCAGGGG...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCAAAAGAATTAGCAGTTaGGACGGTTGTAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPKRISS*DGCRPG
Trigger: CCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTT...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTGTGCGTACTGCTGCTTaGAGCCCATGGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: HLGTALQRWEGRFQNRRIVRTAA*SPWGTG
Trigger: ACCTGTGCCCCATGGGCTTCAAGCAGCAGTACGCAC...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTCGCACCATACACACTTaGACTGCTGCTCGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: HLGTALQRWEGRFQNRRIRTIHT*TAARGR
Trigger: ACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCG...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGTCCCTTGGCTaGGGGTGTCACACGAACTTC +
Preference number: 4 (lower is better)
Translates to: VMGKRFVESGWATAIWPPALSLG*GCHTNF
Trigger: GAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTGC...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCTCAGCCTTCTTACGGTaGCAGAGAAGCATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPSAFLR*QRSMVA
Trigger: TGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGA...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCGTGTTGTGGGGGCTaGAGGCCGGGGTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GKELAVGTVVGLGSMSFEACCGG*RPGSGC
Trigger: GCAGCCAGACCCCGGCCTGCAGCCCCCACAACACGC...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCGGCCGCTCGGAGCTGTaGGTGCGCTTGTGGTGCACC +
Preference number: 4 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGGRSEL*VRLWCT
Trigger: GGTGCACCACAAGCGCACGCACAGCTCCGAGCGGCC...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTGACGACTCCTTGAAATaGAACTCGCACACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPADDSLK*NSHTLQ
Trigger: CTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTC...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTTCAGGGCCCTTGGTGTaGCCACTGATTAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPASGPLV*PLISLL
Trigger: AAGAAGACTAATCAGTGGGCACACCAAGGGCCCTGA...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAATTTTTCTGGCATGAATaGCTGTCAGACAGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQFFWHE*LSDSVP
Trigger: GGGGACACTGTCTGACAGCCATTCATGCCAGAAAAA...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACGATCCGTTCACTTTGTaGCAGCATGAGGTAATGCCA +
Preference number: 4 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHDPFTL*QHEVMP
Trigger: TGGCATTACCTCATGCTGCCACAAAGTGAACGGATC...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTGCCCAATCACAGAGATaGACAAGGACCTCAGACAAG +
Preference number: 4 (lower is better)
Translates to: RFVESGWATAIWPPALPAAQSQR*TRTSDK
Trigger: CTTGTCTGAGGTCCTTGTCCATCTCTGTGATTGGGC...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCGCTTTCCGACATGCTTaGGAAGATGAAACAGGGTTT +
Preference number: 4 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPAFRHA*EDETGF
Trigger: AAACCCTGTTTCATCTTCCCAAGCATGTCGGAAAGC...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCAGGTCAGTGGCCTGGTaGAAGATCTTGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSARSVAW*KILRHC
Trigger: ACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCT...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAAAGGTCTTTTCACAGATaGAACACTTCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQRSFHR*NTSPGH
Trigger: GTGGCCTGGTGAAGTGTTCCATCTGTGAAAAGACCT...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTCTCAGAACACCGAGCTaGGTGGGGCCCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: HLGTALQRWEGRFQNRRILRTPS*VGPLVQ
Trigger: TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAG...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCTTTGTGGAATCAGGATaGGCCACAGCAATCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPFVESG*ATAIWP
Trigger: CGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAA...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCAAGATATGGGAAGGTTaGGCTGGCATCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSKIWEG*AGITPS
Trigger: GGAGGGTGTGATGCCAGCCCAACCTTCCCATATCTT...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTCTTGTTTGCATCTGCTaGGGAGATCCTAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGALVCIC*GDPRPG
Trigger: ACCAGGCCTAGGATCTCCCCAGCAGATGCAAACAAG...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCTTGTCCAGAACATCTTaGCTGTACCAGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPLSRTS*LYQTPG
Trigger: CCCAGGGGTCTGGTACAGCCAAGATGTTCTGGACAA...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAATTGCTTTTTCTGGCATaGATGGCTGTCAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQLLFLA*MAVRQC
Trigger: ACACTGTCTGACAGCCATTCATGCCAGAAAAAGCAA...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCCTGTGTGCACTGGAATaGGCGGTCATGGCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLALCALE*AVMARQ
Trigger: CTGGCGGGCCATGACCGCTCATTCCAGTGCACACAG...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCCCTGGTGGAAGATCTTaGGACACTGTGTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGPGGRS*DTVCTG
Trigger: TCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGG...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGGCCTGCACGCACTGGTaGTCCAGCAGGTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALACTHW*SSRSVA
Trigger: GGCCACTGACCTGCTGGAGCACCAGTGCGTGCAGGC...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCATCAGTGCGTACTGCTaGTTGAAGCCCATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VMGKRFVESGWATAIWPPISAYC*LKPMGH
Trigger: GTGCCCCATGGGCTTCAAGCAGCAGTACGCACTGAT...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTACACTTGTTTGCATCTaGTGGGGAGATCCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPGLVLALKQDWVELTGATLVCI*WGDPRP
Trigger: AGGCCTAGGATCTCCCCAGCAGATGCAAACAAGTGT...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGTCTGGGCACTTGAGTaGCTTCTCGCGGGCCGGATC +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLAVWALE*LLAGRI
Trigger: GATCCGGCCCGCGAGAAGCCACTCAAGTGCCCAGAC...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGCGGGCGTGCACGCCCTaGTGCTTGTTGAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRRACTP*CLLRCS
Trigger: GGAGCATCTCAACAAGCACCAGGGCGTGCACGCCCG...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGGAACACCGAGCTGGGTaGGGCCCTTGGTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VHTIQGRTLVCICWGDPREHRAG*GPWCKA
Trigger: TGCCTTGCACCAAGGGCCCCACCCAGCTCGGTGTTC...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGATGGCACTGTCCCTTaGCTGAGGGTGTCACACGAA +
Preference number: 4 (lower is better)
Translates to: VMGKRFVESGWATAIWPPDGTVP*LRVSHE
Trigger: TTCGTGTGACACCCTCAGCCAAGGGACAGTGCCATC...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCTCTTTCTGCTCCCTATaGCTGGGATACCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGSFCSL*LGYPLL
Trigger: AAGCAGAGGGTATCCCAGTCATAGGGAGCAGAAAGA...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATGGGTTCCATGTCTTTTaGGGCATTGTGACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHGFHVF*GIVTES
Trigger: GCTCTCTGTCACAATGCCTCAAAAGACATGGAACCC...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCAGACACTGGTGCTCATaGGGACTGGACAGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLARHWCS*GLDRCA
Trigger: GGCGCACCTGTCCAGTCCGCATGAGCACCAGTGTCT...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCTCGGCGCTGTGTGTaGGCTCATGCTGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GKELAVGTVVGLGSMSFEARRCV*AHAAAG
Trigger: ACCTGCGGCAGCATGAGCGCACACACAGCGCCGAGC...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CACCTAGGAACTGCACTACAAAGGTGGGAGGGGCGCTTCCAAAACCGGAGGATTTTGAGATGCTCCCGCTaGTTGAAGGCCTTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: HLGTALQRWEGRFQNRRILRCSR*LKALSQ
Trigger: CTGCGACAAGGCCTTCAAGCAGCGGGAGCATCTCAA...AATCCTCCGGTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGTTCCTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGTGCTGCTCGCGGGCGTaGACGCCCTGGTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GKELAVGTVVGLGSMSFECCSRA*TPWCLL
Trigger: CAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCA...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGCTGTGCTGCGCGCTGTaGTCCTGCAACAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALLCCAL*SCNKAT
Trigger: CGTGGCCTTGTTGCAGGAGCACAGCGCGCAGCACAG...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCAGCAGCTCGGCAGATTaGTCAAAGCCTTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VMGKRFVESGWATAIWPPSSSAD*SKPFWH
Trigger: GTGCCAGAAAGGCTTTGACCAATCTGCCGAGCTGCT...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CAA 72 bp CATCCACCAGGTCCCCCACAGGCTTCCTTAACCCACTaGCTCTTTCTGCTCCCTATGACTGGGATACCCTCT +
Preference number: 4 (lower is better)
Translates to: HPPGPPQASLTH*LFLLPMTGIPS
Trigger: AGAGGGTATCCCAGTCATAGGGAGCAGAAAGAGCAAGTGGGTTAAGGAAGCCTGTGGGGGACCTGGTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCAGCAGTTCTGTCTGCTaGGAGCACGGCACATTCCCC +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLASSSVC*EHGTFP
Trigger: GGGGAATGTGCCGTGCTCTCAGCAGACAGAACTGCT...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATCCTTGGTGTGCCCACTaGTTAGTCTTCTTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHPWCAH*LVFFQD
Trigger: GTCTTGAAAGAAGACTAATCAGTGGGCACACCAAGG...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGCTGTGGGAGCTGTGGTaGTGTGCCAGTGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRLWELW*CASEVS
Trigger: ACTCACCTCACTGGCACAGCACCACAGCTCCCACAG...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCTGCGCGCTGTGCTCCTaGAACAAGGCCACGTCTAGG +
Preference number: 4 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGCALCS*NKATSR
Trigger: CCTAGACGTGGCCTTGTTGCAGGAGCACAGCGCGCA...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCCCCCAAGACCCACCCTaGACATCTCCCCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGPQDPP*TSPLPE
Trigger: TTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGGG...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGTCAGACAGTGTCCCCTaGCTTGGTCTGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALSDSVP*LGLQHP
Trigger: GGGGTGCTGCAGACCAAGCCAGGGGACACTGTCTGA...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGTGGAATGAGCGGTCATaGCCCGCCAGACACTGGTGC +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALWNERS*PARHWC
Trigger: GCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCA...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCTTGTGTGTGCGCCGGTaGCGCATCAGTGCGTACTGC +
Preference number: 4 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGLCVRR*RISAYC
Trigger: GCAGTACGCACTGATGCGCCACCGGCGCACACACAA...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CAA 72 bp ACCTATGTGGCTGCTAGCTTGAAAGATATGGGAAGGTaGGGCTGGCATCACACCCTCCTTAGGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TYVAASLKDMGR*GWHHTLLRAGR
Trigger: TCTCCCTGCCCTAAGGAGGGTGTGATGCCAGCCCAACCTTCCCATATCTTTCAAGCTAGCAGCCACATAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
3UTR CAA 72 bp CTGACGCTTTGGTTCACACAATTCAGGGGAGGACACTaGTTTGCATCTGCTGGGGAGATCCTAGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LTLWFTQFRGGH*FASAGEILGLV
Trigger: GACCAGGCCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAACCAAAGCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCTCCGACGACTCCTTaGAATGCAACTCGCACACGT +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLAAPTTP*NATRTR
Trigger: ACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGC...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGTGGAGGCAGCAGGTTaGTTGAGCAAGCAGGTACCA +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLAVEAAG*LSKQVP
Trigger: TGGTACCTGCTTGCTCAAGCAACCTGCTGCCTCCAC...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGCAGACGAAGGGCTTCTaGTCAGCCTGCACGCACTGG +
Preference number: 4 (lower is better)
Translates to: GKELAVGTVVGLGSMSFEQTKGF*SACTHW
Trigger: CCAGTGCGTGCAGGCTGAGCAGAAGCCCTTCGTCTG...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCCGCACTGCCCGCTGGTaGCAGGAGTACGAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: MIILIIKVLLGFLRRAVARTARW*QEYERH
Trigger: GTGCCGCTCGTACTCCTGGCACCAGCGGGCAGTGCG...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGGTTTCCCGCTTCACGTaGCCCAATCCAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRVSRFT*PNPERE
Trigger: TTCTCTCTCTGGATTGGGTCACGTGAAGCGGGAAAC...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGGCTGTGCCAGTGAGGTaGGTAGTGAGAAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALAVPVR*VVRSPS
Trigger: AGATGGGCTTCTCACTACTCACCTCACTGGCACAGC...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGGGTCTGACGCGTACTTaGAGCGTTTCTCGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALGLTRT*SVSRSL
Trigger: CAGACTGCGAGAAACGCTTCAAGTACGCGTCAGACC...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AAAATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCGGCCTACGCGCGCTaGCAATCCCCGGCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: KMIILIIKVLLGFLRRAVAAYAR*QSPASR
Trigger: ACGCGAGGCCGGGGATTGGCAGCGCGCGTAGGCCGC...TACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGGTGAGAAGCCCATCTTaGAGACCCCACAGACGAAGG +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALVRSPS*RPHRRR
Trigger: CCTTCGTCTGTGGGGTCTGCAAGATGGGCTTCTCAC...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp TCTTGTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCTGGGCTGACAATCCCTaGCTTTCACACCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SCHGKEVCGIRMGHSNLAWADNP*LSHQQF
Trigger: GAACTGCTGGTGTGAAAGGCAGGGATTGTCAGCCCA...GGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGACTGCACTACAAAGGTaGGAGGGGCGCTTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALTALQR*EGRFQN
Trigger: GTTTTGGAAGCGCCCCTCCCACCTTTGTAGTGCAGT...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGAAGCCCCTGACGCTTTaGTTCACACAATTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRKPLTL*FTQFRG
Trigger: TCCCCTGAATTGTGTGAACCAAAGCGTCAGGGGCTT...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGTCCAGAGAGAGAAGCTaGCCAATCACAGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALSRERS*PITEMD
Trigger: GTCCATCTCTGTGATTGGGCAGCTTCTCTCTCTGGA...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AAAATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGTGTGTACCCGCCGGTaGCGCTGCAGGTCTGACGCG +
Preference number: 4 (lower is better)
Translates to: KMIILIIKVLLGFLRRAVVCTRR*RCRSDA
Trigger: CGCGTCAGACCTGCAGCGGCACCGGCGGGTACACAC...TACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp AAAATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTATGGGCCACAGCAATCTaGCCGCCCGCACTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KMIILIIKVLLGFLRRAVWATAI*PPALPA
Trigger: AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCA...TACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCGGTGAGAGCGGTGCTTaGAGGTCTTCTCGCAGACTG +
Preference number: 4 (lower is better)
Translates to: MIILIIKVLLGFLRRAVAGESGA*RSSRRL
Trigger: CAGTCTGCGAGAAGACCTTCAAGCACCGCTCTCACC...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AAAATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAACCCGCCGGTGCCGCTaGAGGTCTGACGCGTACTTG +
Preference number: 4 (lower is better)
Translates to: KMIILIIKVLLGFLRRAVTRRCR*RSDAYL
Trigger: CAAGTACGCGTCAGACCTGCAGCGGCACCGGCGGGT...TACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCGTCTGTGGCGGCTGTTaGCAGCTTTCCGACATGCTT +
Preference number: 4 (lower is better)
Translates to: MIILIIKVLLGFLRRAVAVCGGC*QLSDML
Trigger: AAGCATGTCGGAAAGCTGGCAACAGCCGCCACAGAC...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp AAAATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGATGCTCCCGCTGCTTaGAGGCCTTGTCGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: KMIILIIKVLLGFLRRAVDAPAA*RPCRSW
Trigger: CCAACTGCGACAAGGCCTTCAAGCAGCGGGAGCATC...TACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCTCTTTTGAGGCATTGTaGCAGAGAGCCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: MIILIIKVLLGFLRRAVASFEAL*QRASTE
Trigger: CTCGGTGCTGGCTCTCTGTCACAATGCCTCAAAAGA...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp AAAATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGTGTGGATCCGCTCATaGCGAGAGAGCTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: KMIILIIKVLLGFLRRAVVWIRS*RESSDR
Trigger: CCTGTCGGAGCTCTCTCGGCATGAGCGGATCCACAC...TACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCCCTGTAGGTCCGCTGTaGCAACCCACTGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: MIILIIKVLLGFLRRAVAPVGPL*QPTVLF
Trigger: AAACAAAACAGTGGGTTGGCACAGCGGACCTACAGG...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CCA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGTTTGTTTGCTTTTTCTaGCATGAATGGCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALFVCFF*HEWLSD
Trigger: GTCTGACAGCCATTCATGCCAGAAAAAGCAAACAAA...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR TCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCATGTGGCTGCTAGCTTaGAAGATATGGGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: MIILIIKVLLGFLRRAVAMWLLA*KIWEGW
Trigger: CCAACCTTCCCATATCTTTCAAGCTAGCAGCCACAT...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR GCA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCGGTTCCCAGCTCATCTaGCTCTTACATTTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: MIILIIKVLLGFLRRAVAGSQLI*LLHLKV
Trigger: AACTTTTAAATGTAAGAGGCAGATGAGCTGGGAACC...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp CCTGCAGGCCCAGCTGGGCTGCGTCCTGTCAGCCCTCGTCCGGGATaGCCCGGCCGCTGCGACCCGAGGGCGAGCCCCGAGGGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: PAGPAGLRPVSPRPG*PGRCDPRASPEGGR
Trigger: CCGGCCGCCCTCGGGGCTCGCCCTCGGGTCGCAGCGGCCGGGCCATCCCGGACGAGGGCTGACAGGACGCAGCCCAGCTGGGCCTGCAGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp GCTGGGCTGCGTCCTGTCAGCCCTCGTCCGGGATGGCCCGGCCGCTaGGACCCGAGGGCGAGCCCCGAGGGCGGCCGGGCTGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: AGLRPVSPRPGWPGR*DPRASPEGGRAGER
Trigger: CCTTTCTCCAGCCCGGCCGCCCTCGGGGCTCGCCCTCGGGTCGCAGCGGCCGGGCCATCCCGGACGAGGGCTGACAGGACGCAGCCCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp CTCCAGGCCGCCTGCAGGGCAGGCGCGGGGCGAGCGGCGACCAGCTaGTCTCTCGGCCGCCCCTTTATTCCGGCTCCATCCGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LQAACRAGAGRAATS*SLGRPFIPAPSAAA
Trigger: CGCCGCCGCGGATGGAGCCGGAATAAAGGGGCGGCCGAGAGAGCAGCTGGTCGCCGCTCGCCCCGCGCCTGCCCTGCAGGCGGCCTGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp GCTACAGGCCGGGCCCAGGAAGCGGCTGCGCCTCGAGGCCCGGCCTaGGCCGCCCAGAAGCTCAAGAGGCCGCTAGGTCGCGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: ATGRAQEAAAPRGPA*AAQKLKRPLGRGGG
Trigger: CCCTCCGCCGCGACCTAGCGGCCTCTTGAGCTTCTGGGCGGCCCAGGCCGGGCCTCGAGGCGCAGCCGCTTCCTGGGCCCGGCCTGTAGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 90 bp GGCAGCGTGTGCTCTGCCAGGGCTGGCGGTGGCTCTGCATGGTGCTaGGGCTGCGGTGGCTGTGGCTGCTGCGGCTGCGTCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: GSVCSARAGGGSAWC*GCGGCGCCGCVCGG
Trigger: GCCGCCACAGACGCAGCCGCAGCAGCCACAGCCACCGCAGCCTCAGCACCATGCAGAGCCACCGCCAGCCCTGGCAGAGCACACGCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1
CDS GCA 90 bp GCAGGAGGATGCCATAGACGGCACAGCCCAGGGGGTTCTCCGCCGTaGCCGGAGGCAGCGTGTGCTCTGCCAGGGCTGGCGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: AGGCHRRHSPGGSPP*PEAACALPGLAVAL
Trigger: CAGAGCCACCGCCAGCCCTGGCAGAGCACACGCTGCCTCCGGGCACGGCGGAGAACCCCCTGGGCTGTGCCGTCTATGGCATCCTCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1
CDS GCA 90 bp CCCTCCGCTGCCGCGGCGGCGGCACTGTGCTGCGCGCTGTGCTCCTaGAACAAGGCCACGTCTAGGAAGCGCTCCCCGCACCATACACAC +
Preference number: 5 (lower is better)
Translates to: PSAAAAAALCCALCS*NKATSRKRSPHHTH
Trigger: GTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGGCCTTGTTGCAGGAGCACAGCGCGCAGCACAGTGCCGCCGCCGCGGCAGCGGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp GGAGAAGAAGCGGCGTTCGCAAAGCGTGCAGCGCAGGGGCTTCTCTaGCGCCGCACAGTGGGCCAGCTGGTGCTTCTGCAGGGCCGACGC +
Preference number: 5 (lower is better)
Translates to: GEEAAFAKRAAQGLL*RRTVGQLVLLQGRR
Trigger: GCGTCGGCCCTGCAGAAGCACCAGCTGGCCCACTGTGCGGCGGCAGAGAAGCCCCTGCGCTGCACGCTTTGCGAACGCCGCTTCTTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CTGCGCGAGGCCTGCTGGGCCCACGGCGCCGACTCAGGTCAGGCTGGTAGGGGCGAGGCAGCAGGTTGCTaGAGCAAGCAGGTACCACTC +
Preference number: 5 (lower is better)
Translates to: LREACWAHGADSGQAGRGEAAGC*SKQVPL
Trigger: GAGTGGTACCTGCTTGCTCAAGCAACCTGCTGCCTC...GCCCCTACCAGCCTGACCTGAGTCGGCGCCGTGGGCCCAGCAGGCCTCGCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp CAGTGGAAGGCGCGGGTGCTGCGGGAAGCGACGGGGCGGCTGTGGTaGCTGGCTCCGCTGCCTCAGCTGGCTTGTAGGTCTTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: QWKARVLREATGRLW*LAPLPQLACRSFHR
Trigger: TCTGTGAAAAGACCTACAAGCCAGCTGAGGCAGCGGAGCCAGCCACCACAGCCGCCCCGTCGCTTCCCGCAGCACCCGCGCCTTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 90 bp GCCAGACACTGGTGCTCATGCGGACTGGACAGGTGCGCCAGGTCGTaGCCACACACGCCACATTTGGGGCCTGGCTCTCCTGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ARHWCSCGLDRCARS*PHTPHLGPGSPAAC
Trigger: GCAGGCAGCAGGAGAGCCAGGCCCCAAATGTGGCGTGTGTGGTCACGACCTGGCGCACCTGTCCAGTCCGCATGAGCACCAGTGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp AATGGCTGTCAGACAGTGTCCCCTGGCTTGGTCTGCAGCACCCCCTaGCCACCCTGGCCCTCCTGCAGCAAGGTGCAGCCAGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: NGCQTVSPGLVCSTP*PPWPSCSKVQPGSL
Trigger: GAGGCTTCCTGGCTGCACCTTGCTGCAGGAGGGCCAGGGTGGGCAGGGGGTGCTGCAGACCAAGCCAGGGGACACTGTCTGACAGCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp GCTGCACGAACTCGGAAGAGGAGAAGAAGCGGCGTTCGCAAAGCGTaGAGCGCAGGGGCTTCTCTGCCGCCGCACAGTGGGCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: AARTRKRRRSGVRKA*SAGASLPPHSGPAG
Trigger: ACCAGCTGGCCCACTGTGCGGCGGCAGAGAAGCCCCTGCGCTGCACGCTTTGCGAACGCCGCTTCTTCTCCTCTTCCGAGTTCGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp GCCACGTCTAGGAAGCGCTCCCCGCACCATACACACTTGAACTGCTaGTCGCGGGCGTGCACGCCCTGGTGCTTGTTGAGATGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: ATSRKRSPHHTHLNC*SRACTPWCLLRCSR
Trigger: GCGGGAGCATCTCAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp GGAATGAGCGGTCATGGCCCGCCAGACACTGGTGCTCATGCGGACTaGACAGGTGCGCCAGGTCGTGACCACACACGCCACATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GMSGHGPPDTGAHAD*TGAPGRDHTRHIWG
Trigger: GCCCCAAATGTGGCGTGTGTGGTCACGACCTGGCGCACCTGTCCAGTCCGCATGAGCACCAGTGTCTGGCGGGCCATGACCGCTCATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CCTGCGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTTGCAACTCGCACACGTaGCAGCGGAACAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PASSLPRSQNTELGGALGCNSHT*QRNRWC
Trigger: GCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCA...ACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 90 bp CCCCACTTGGCGTGCACGGGTGCTGCAGCAGCTCCGACGACTCCTTaGAATGCAACTCGCACACGTTGCAGCGGAACAGGTGGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: PHLACTGAAAAPTTP*NATRTRCSGTGGAR
Trigger: GCGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGCAGCACCCGTGCACGCCAAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp CTTGGCGTGCACGGGTGCTGCAGCAGCTCCGACGACTCCTTGAAATaGAACTCGCACACGTTGCAGCGGAACAGGTGGTGCTCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LGVHGCCSSSDDSLK*NSHTLQRNRWCSPE
Trigger: CTCGGGCGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGCAGCACCCGTGCACGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp TCTGGGCACTTGAGTGGCTTCTCGCGGGCCGGATCGCAGCGGTGCTaGACGAACTCGGAAGAGGAGAAGAAGCGGCGTTCGCAAAGCGTG +
Preference number: 5 (lower is better)
Translates to: SGHLSGFSRAGSQRC*TNSEEEKKRRSQSV
Trigger: CACGCTTTGCGAACGCCGCTTCTTCTCCTCTTCCGAGTTCGTGCAGCACCGCTGCGATCCGGCCCGCGAGAAGCCACTCAAGTGCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp CAGTCTGGGCACTTGAGTGGCTTCTCGCGGGCCGGATCGCAGCGGTaGTGCACGAACTCGGAAGAGGAGAAGAAGCGGCGTTCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: QSGHLSGFSRAGSQR*CTNSEEEKKRRSQS
Trigger: GCTTTGCGAACGCCGCTTCTTCTCCTCTTCCGAGTTCGTGCAGCACCGCTGCGATCCGGCCCGCGAGAAGCCACTCAAGTGCCCAGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp AAGCGCTCCCCGCACCATACACACTTGAACTGCTGCTCGCGGGCGTaGACGCCCTGGTGCTTGTTGAGATGCTCCCGCTGCTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: KRSPHHTHLNCCSRA*TPWCLLRCSRCLKA
Trigger: GGCCTTCAAGCAGCGGGAGCATCTCAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp TCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACACGGCAACTGATGCCAGGTCCGAGGGCCGCTaGAAGGCCTTCTGGCACTCG +
Preference number: 5 (lower is better)
Translates to: SPGLRLKAGLLPHTATDARSEGR*KAFWHS
Trigger: CGAGTGCCAGAAGGCCTTCAAGCGGCCCTCGGACCT...GGCATCAGTTGCCGTGTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAAGGATGGCACTGTCCCTaGGCTGAGGGTGTCACACGA +
Preference number: 5 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQGWHCP*AEGVTR
Trigger: TCGTGTGACACCCTCAGCCAAGGGACAGTGCCATCC...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp AAGGCCACGTCTAGGAAGCGCTCCCCGCACCATACACACTTGAACTaGTGCTCGCGGGCGTGCACGCCCTGGTGCTTGTTGAGATGCTCC +
Preference number: 5 (lower is better)
Translates to: KATSRKRSPHHTHLN*CSRACTPWCLLRCS
Trigger: GGAGCATCTCAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp GGGAAGCGACGGGGCGGCTGTGGTGGCTGGCTCCGCTGCCTCAGCTaGCTTGTAGGTCTTTTCACAGATGGAACACTTCACCAGGCCACT +
Preference number: 5 (lower is better)
Translates to: GKRRGGCGGWLRCLS*LVGLFTDGTLHQAT
Trigger: AGTGGCCTGGTGAAGTGTTCCATCTGTGAAAAGACCTACAAGCCAGCTGAGGCAGCGGAGCCAGCCACCACAGCCGCCCCGTCGCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATACAGTGTCCCCTGGCTaGGTCTGCAGCACCCCCTGC +
Preference number: 5 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHTVSPG*VCSTPC
Trigger: GCAGGGGGTGCTGCAGACCAAGCCAGGGGACACTGT...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTCGTCTGTGGCGGCTGTaGCCAGCTTTCCGACATGCT +
Preference number: 5 (lower is better)
Translates to: RFVESGWATAIWPPALPARLWRL*PAFRHA
Trigger: AGCATGTCGGAAAGCTGGCAACAGCCGCCACAGACG...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCAGTGCGTACTGCTGCTaGAAGCCCATGGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSASAYCC*KPMGHR
Trigger: CCTGTGCCCCATGGGCTTCAAGCAGCAGTACGCACT...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CTGGGCTTCCTAAGGAGGGCCGTAGCCACCCAGCGATGTTGGTCAACTCCATCCTGCACGCCCTGGTGCTaGTTGAGATGCTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LGFLRRAVATQRCWSTPSCTPWC*LRCSRC
Trigger: GCAGCGGGAGCATCTCAACAAGCACCAGGGCGTGCA...GGATGGAGTTGACCAACATCGCTGGGTGGCTACGGCCCTCCTTAGGAAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CCCAAGACCCACCCTGCACATCTCCCCTGCCAGAAACCTGGGGACACGTCGCCCCCAAAACCGGAGGATTaGCCCTTAGCAGAGACAGGC +
Preference number: 5 (lower is better)
Translates to: PKTHPAHLPCQKPGDTSPPKPED*PLAETG
Trigger: GCCTGTCTCTGCTAAGGGCAAATCCTCCGGTTTTGG...GGGCGACGTGTCCCCAGGTTTCTGGCAGGGGAGATGTGCAGGGTGGGTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 90 bp GCACGCACTGGTGCTCCAGCAGGTCAGTGGCCTGGTGGAAGATCTTaGGACACTGTGTGCACTGGAATGAGCGGTCATGGCCCGCCAGAC +
Preference number: 5 (lower is better)
Translates to: ARTGAPAGQWPGGRS*DTVCTGMSGHGPPD
Trigger: GTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACCAGTGCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp AAGCCCATCTTGCAGACCCCACAGACGAAGGGCTTCTGCTCAGCCTaGACGCACTGGTGCTCCAGCAGGTCAGTGGCCTGGTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: KPILQTPQTKGFCSA*THWCSSRSVAWWKI
Trigger: GATCTTCCACCAGGCCACTGACCTGCTGGAGCACCAGTGCGTGCAGGCTGAGCAGAAGCCCTTCGTCTGTGGGGTCTGCAAGATGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp TCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACACGGCAACTGATGCCGGTGGAGGCAGCAGGTaGCTTGAGCAAGCAGGTACC +
Preference number: 5 (lower is better)
Translates to: SPGLRLKAGLLPHTATDAGGGSR*LEQAGT
Trigger: GGTACCTGCTTGCTCAAGCAACCTGCTGCCTCCACC...GGCATCAGTTGCCGTGTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CCTCTGCCCTCCCAGTCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACAGCTCCGACAGGTGCTaGAAGGGCTTTTGGCAGATG +
Preference number: 5 (lower is better)
Translates to: PLPSQSPGLRLKAGLLPHSSDRC*KGFWQM
Trigger: CATCTGCCAAAAGCCCTTCAAGCACCTGTCGGAGCT...GTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGACTGGGAGGGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAATCACATAGGCCGCATTaGAAGGGCTCCTCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQSHRPH*KGSSVL
Trigger: CAAGACCGAGGAGCCCTTCAAATGCGGCCTATGTGA...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTCACCCTGGCCTAGTCTaGGCTCTGAAGCAGGACTGG +
Preference number: 5 (lower is better)
Translates to: HPGLVLALKQDWVELTGAHPGLV*ALKQDW
Trigger: CCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp TGGTGGAAGATCTTGAGACACTGTGTGCACTGGAATGAGCGGTCATaGCCCGCCAGACACTGGTGCTCATGCGGACTGGACAGGTGCGCC +
Preference number: 5 (lower is better)
Translates to: WWKILRHCVHWNERS*PARHWCSCGLDRCA
Trigger: GGCGCACCTGTCCAGTCCGCATGAGCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp AGGCACTTGTGCCGCAGCAGCTCGGCAGATTGGTCAAAGCCTTTCTaGCACACGGGGCACTTGAAGAGAGTCTCGAGGGTGTGCACGTGC +
Preference number: 5 (lower is better)
Translates to: RHLCRSSSADWSKPF*HTGHLKRVSRVCTC
Trigger: GCACGTGCACACCCTCGAGACTCTCTTCAAGTGCCCCGTGTGCCAGAAAGGCTTTGACCAATCTGCCGAGCTGCTGCGGCACAAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTCAGCAGCTCGGCAGATaGGTCAAAGCCTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: RFVESGWATAIWPPALPAQQLGR*VKAFLA
Trigger: TGCCAGAAAGGCTTTGACCAATCTGCCGAGCTGCTG...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp AGCAGAGACAGGCTGCTTTTCCTCCTGTCCCCAAGGATGGCACTGTCCCTTGGCACGCCCTGGTGCTTGTaGAGATGCTCCCGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SRDRLLFLLSPRMALSLGTPWCL*RCSRCL
Trigger: CAAGCAGCGGGAGCATCTCAACAAGCACCAGGGCGT...GCCAAGGGACAGTGCCATCCTTGGGGACAGGAGGAAAAGCAGCCTGTCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCCCGCACCATACACACTaGAACTGCTGCTCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: VMGKRFVESGWATAIWPPPHHTH*NCCSRA
Trigger: CGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGG...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp AGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCACTGCCCGCTGTTGTCCAGAACATCTaGGCTGTACCAGACCCCTGG +
Preference number: 5 (lower is better)
Translates to: RFVESGWATAIWPPALPAVVQNI*AVPDPW
Trigger: CCAGGGGTCTGGTACAGCCAAGATGTTCTGGACAAC...AGCGGGCAGTGCGGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp TCCCCAGGCCTACGTCTTAAAGCTGGCCTTCTCCCCCACACGGCAACTGATGCCAGCCACCCAGCGATGTaGGTCAACTCCATCCACCAG +
Preference number: 5 (lower is better)
Translates to: SPGLRLKAGLLPHTATDASHPAM*VNSIHQ
Trigger: CTGGTGGATGGAGTTGACCAACATCGCTGGGTGGCT...GGCATCAGTTGCCGTGTGGGGGAGAAGGCCAGCTTTAAGACGTAGGCCTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 90 bp GTCAGTGGCCTGGTGGAAGATCTTGAGACACTGTGTGCACTGGAATaGGCGGTCATGGCCCGCCAGACACTGGTGCTCATGCGGACTGGA +
Preference number: 5 (lower is better)
Translates to: VSGLVEDLETLCALE*AVMARQTLVLMRTG
Trigger: TCCAGTCCGCATGAGCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 90 bp GCAGCTCGGCAGATTGGTCAAAGCCTTTCTGGCACACGGGGCACTTaGAGAGAGTCTCGAGGGTGTGCACGTGCTGGTGGTAGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: AARQIGQSLSGTRGT*RESRGCARAGGRAG
Trigger: ACCTGCTCTACCACCAGCACGTGCACACCCTCGAGACTCTCTTCAAGTGCCCCGTGTGCCAGAAAGGCTTTGACCAATCTGCCGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp AGCAGGTCAGTGGCCTGGTGGAAGATCTTGAGACACTGTGTGCACTaGAATGAGCGGTCATGGCCCGCCAGACACTGGTGCTCATGCGGA +
Preference number: 5 (lower is better)
Translates to: SRSVAWWKILRHCVH*NERSWPARHWCSCG
Trigger: TCCGCATGAGCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp TGCTCAGCCTGCACGCACTGGTGCTCCAGCAGGTCAGTGGCCTGGTaGAAGATCTTGAGACACTGTGTGCACTGGAATGAGCGGTCATGG +
Preference number: 5 (lower is better)
Translates to: CSACTHWCSSRSVAW*KILRHCVHWNERSW
Trigger: CCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACCAGTGCGTGCAGGCTGAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCGCCTGGTGGAAGATCTaGAGACACTGTGTGCACTGG +
Preference number: 5 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPAWWKI*RHCVHW
Trigger: CCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGC...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCAGCTCCGACGACTCCTaGAAATGCAACTCGCACACG +
Preference number: 5 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPSSDDS*KCNSHT
Trigger: CGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCT...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CACTGTCCCTTGGCTGAGGGTGTCACACGAACTTCTCAGCTTCCCCCTTCCCCCTTCAGGGGAGGACACTaGTTTGCATCTGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: HCPLAEGVTRTSQLPPSPFRGGH*FASAGE
Trigger: CTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAA...GGGGGAAGGGGGAAGCTGAGAAGTTCGTGTGACACCCTCAGCCAAGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CACCCTGGCCTAGTCTTGGCTCTGAAGCAGGACTGGGTTGAGCTGACTGGGGCTCAAGCCCCTGACGCTTaGGTTCACACAATTCAGGGG +
Preference number: 5 (lower is better)
Translates to: HPGLVLALKQDWVELTGAQAPDA*VHTIQG
Trigger: CCCCTGAATTGTGTGAACCAAAGCGTCAGGGGCTTG...AGCCCCAGTCAGCTCAACCCAGTCCTGCTTCAGAGCCAAGACTAGGCCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp TTCTGCTCAGCCTGCACGCACTGGTGCTCCAGCAGGTCAGTGGCCTaGTGGAAGATCTTGAGACACTGTGTGCACTGGAATGAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: FCSACTHWCSSRSVA*WKILRHCVHWNERS
Trigger: TGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACCAGTGCGTGCAGGCTGAGCAGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CGTCCTCACTCCCGAGGTCTCAGAACACCGAGCTGGGTGGGGCCCTTGGTGCAAAGTGATCCGTTCACTTaGTGGCAGCATGAGGTAATG +
Preference number: 5 (lower is better)
Translates to: RPHSRGLRTPSWVGPLVQSDPFT*WQHEVM
Trigger: CATTACCTCATGCTGCCACAAAGTGAACGGATCACT...TTGCACCAAGGGCCCCACCCAGCTCGGTGTTCTGAGACCTCGGGAGTGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCAGGTCTGACGCGTACTaGAAGCGTTTCTCGCAGTCT +
Preference number: 5 (lower is better)
Translates to: VMGKRFVESGWATAIWPPRSDAY*KRFSQS
Trigger: AGACTGCGAGAAACGCTTCAAGTACGCGTCAGACCT...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp TTTTCACAGATGGAACACTTCACCAGGCCACTGTGGGAGCTGTGGTaGTGTGCCAGTGAGGTGAGTAGTGAGAAGCCCATCTTGCAGACC +
Preference number: 5 (lower is better)
Translates to: FSQMEHFTRPLWELW*CASEVSSEKPILQT
Trigger: GGTCTGCAAGATGGGCTTCTCACTACTCACCTCACTGGCACAGCACCACAGCTCCCACAGTGGCCTGGTGAAGTGTTCCATCTGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 90 bp GTCTTTTCACAGATGGAACACTTCACCAGGCCACTGTGGGAGCTGTaGTGCTGTGCCAGTGAGGTGAGTAGTGAGAAGCCCATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VFSQMEHFTRPLWEL*CCASEVSSEKPILQ
Trigger: CTGCAAGATGGGCTTCTCACTACTCACCTCACTGGCACAGCACCACAGCTCCCACAGTGGCCTGGTGAAGTGTTCCATCTGTGAAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp TGGCCACAGGAAGGAACTCAGTCAGACAGAGGAGGTGGGCGTGGCTGGTCAGCCAAGATGAAACAGGGTTaGGAGAGTAATGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: WPQEGTQSDRGGGRGWSAKMKQG*ESNGFS
Trigger: ACTGAAGCCATTACTCTCCAAACCCTGTTTCATCTT...GGCTGACCAGCCACGCCCACCTCCTCTGTCTGACTGAGTTCCTTCCTGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GTTCACACAATTCAGGGGAGGACACTTGTTTGCATCTGCTGGGGAGATCCTAGGAGATGCTCCCGCTGCTaGAAGGCCTTGTCGCAGTTG +
Preference number: 5 (lower is better)
Translates to: VHTIQGRTLVCICWGDPRRCSRC*KALSQL
Trigger: CAACTGCGACAAGGCCTTCAAGCAGCGGGAGCATCT...CCTAGGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCCTGAATTGTGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GTCATGGGAAAGAGGTTTGTGGAATCAGGATGGGCCACAGCAATCTGGCCGCCCGCTTCCTTAACCCACTaGCTCTTTCTGCTCCCTATG +
Preference number: 5 (lower is better)
Translates to: VMGKRFVESGWATAIWPPASLTH*LFLLPM
Trigger: CATAGGGAGCAGAAAGAGCAAGTGGGTTAAGGAAGC...GGGCGGCCAGATTGCTGTGGCCCATCCTGATTCCACAAACCTCTTTCCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 90 bp GGCTTCAGTTTCCCGCTTCACGTGACCCAATCCAGAGAGAGAAGCTaGCCAATCACAGAGATGGACAAGGACCTCAGACAAGGCACAGAA +
Preference number: 5 (lower is better)
Translates to: GFSFPLHVTQSRERS*PITEMDKDLRQGTE
Trigger: TTCTGTGCCTTGTCTGAGGTCCTTGTCCATCTCTGTGATTGGGCAGCTTCTCTCTCTGGATTGGGTCACGTGAAGCGGGAAACTGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1
CDS-3UTR CAA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATTGCCAACCCACTGTTTaGTTTGCTTTTTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHCQPTV*FAFSGM
Trigger: CATGCCAGAAAAAGCAAACAAAACAGTGGGTTGGCA...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGTGGCACACGGGGCACTaGAAGAGAGTCTCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GKELAVGTVVGLGSMSFEWHTGH*KRVSRV
Trigger: CACCCTCGAGACTCTCTTCAAGTGCCCCGTGTGCCA...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GAGGTGGGCGTGGCTGGTCAGCCTTCTTACGGTGACAGAGAAGCATGGTGGCATTATGTGGCTGCTAGCTaGAAAGATATGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: EVGVAGQPSYGDREAWWHYVAAS*KDMGRL
Trigger: CAACCTTCCCATATCTTTCAAGCTAGCAGCCACATA...ATGCCACCATGCTTCTCTGTCACCGTAAGAAGGCTGACCAGCCACGCCCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp CCAAAGGACACTCTGGCCTTTGAAGTAGCTGGATGTTGTCCAGAACATCTTGGCGACTGGCTGAAGCTTTaGTCACACAGCGTGCACTTG +
Preference number: 5 (lower is better)
Translates to: PKDTLAFEVAGCCPEHLGDWLKL*SHSVHL
Trigger: CAAGTGCACGCTGTGTGACAAAAGCTTCAGCCAGTC...GCCAAGATGTTCTGGACAACATCCAGCTACTTCAAAGGCCAGAGTGTCCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GGAAAAGAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGAAAGATATGGGAAGGTaGGGCTGGCATCACACCCTC +
Preference number: 5 (lower is better)
Translates to: GKELAVGTVVGLGSMSFEKDMGR*GWHHTL
Trigger: GAGGGTGTGATGCCAGCCCAACCTTCCCATATCTTT...CTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp ATGATTATTTTAATAATAAAGGTCCTTCTGGGCTTCCTAAGGAGGGCCGTAGCCGGGGAGGACACTTGTTaGCATCTGCTGGGGAGATCC +
Preference number: 5 (lower is better)
Translates to: MIILIIKVLLGFLRRAVAGEDTC*HLLGRS
Trigger: GGATCTCCCCAGCAGATGCAAACAAGTGTCCTCCCC...GGCTACGGCCCTCCTTAGGAAGCCCAGAAGGACCTTTATTATTAAAATAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS-3UTR CAA 90 bp GAATTAGCAGTTGGGACGGTTGTAGGCCTGGGTTCCATGTCTTTTGAGGCATTGTGGGTTCCATGTCTTTaGAGGCATTGTGACAGAGAG +
Preference number: 5 (lower is better)
Translates to: ELAVGTVVGLGSMSFEALWVPCL*RHCDRE
Trigger: CTCTCTGTCACAATGCCTCAAAAGACATGGAACCCA...CAATGCCTCAAAAGACATGGAACCCAGGCCTACAACCGTCCCAACTGCTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp AGGCCCCAGGGCTACAGGCCGGGCCCAGGAAGCGGCTaGGCCTCGAGGCCCGGCCTGGGCCGCCCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: RPQGYRPGPGSG*ASRPGLGRPEA
Trigger: AGCTTCTGGGCGGCCCAGGCCGGGCCTCGAGGCGCAGCCGCTTCCTGGGCCCGGCCTGTAGCCCTGGGGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp CCAGCTGGGCTGCGTCCTGTCAGCCCTCGTCCGGGATaGCCCGGCCGCTGCGACCCGAGGGCGAGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: PAGLRPVSPRPG*PGRCDPRASPE
Trigger: CTCGGGGCTCGCCCTCGGGTCGCAGCGGCCGGGCCATCCCGGACGAGGGCTGACAGGACGCAGCCCAGCTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp CGGGCCCAGGAAGCGGCTGCGCCTCGAGGCCCGGCCTaGGCCGCCCAGAAGCTCAAGAGGCCGCTAGGTCGC +
Preference number: 6 (lower is better)
Translates to: RAQEAAAPRGPA*AAQKLKRPLGR
Trigger: GCGACCTAGCGGCCTCTTGAGCTTCTGGGCGGCCCAGGCCGGGCCTCGAGGCGCAGCCGCTTCCTGGGCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp GCCTGCAGGGCAGGCGCGGGGCGAGCGGCGACCAGCTaGTCTCTCGGCCGCCCCTTTATTCCGGCTCCATCC +
Preference number: 6 (lower is better)
Translates to: ACRAGAGRAATS*SLGRPFIPAPS
Trigger: GGATGGAGCCGGAATAAAGGGGCGGCCGAGAGAGCAGCTGGTCGCCGCTCGCCCCGCGCCTGCCCTGCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp CCCAGGGGGTTCTCCGCCGTGCCCGGAGGCAGCGTGTaGTCTGCCAGGGCTGGCGGTGGCTCTGCATGGTGC +
Preference number: 6 (lower is better)
Translates to: PRGFSAVPGGSV*SARAGGGSAWC
Trigger: GCACCATGCAGAGCCACCGCCAGCCCTGGCAGAGCACACGCTGCCTCCGGGCACGGCGGAGAACCCCCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1
CDS GCA 72 bp TGCCATAGACGGCACAGCCCAGGGGGTTCTCCGCCGTaGCCGGAGGCAGCGTGTGCTCTGCCAGGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: CHRRHSPGGSPP*PEAACALPGLA
Trigger: CGCCAGCCCTGGCAGAGCACACGCTGCCTCCGGGCACGGCGGAGAACCCCCTGGGCTGTGCCGTCTATGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1
CDS CCA 72 bp AAGGCGCGGGTGCTGCGGGAAGCGACGGGGCGGCTGTaGTGGCTGGCTCCGCTGCCTCAGCTGGCTTGTAGG +
Preference number: 6 (lower is better)
Translates to: KARVLREATGRL*WLAPLPQLACR
Trigger: CCTACAAGCCAGCTGAGGCAGCGGAGCCAGCCACCACAGCCGCCCCGTCGCTTCCCGCAGCACCCGCGCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp TCCGCTGCCGCGGCGGCGGCACTGTGCTGCGCGCTGTaGTCCTGCAACAAGGCCACGTCTAGGAAGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SAAAAAALCCAL*SCNKATSRKRS
Trigger: GGAGCGCTTCCTAGACGTGGCCTTGTTGCAGGAGCACAGCGCGCAGCACAGTGCCGCCGCCGCGGCAGCGGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp GCGGCGTTCGCAAAGCGTGCAGCGCAGGGGCTTCTCTaGCGCCGCACAGTGGGCCAGCTGGTGCTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: AAFAKRAAQGLL*RRTVGQLVLLQ
Trigger: CTGCAGAAGCACCAGCTGGCCCACTGTGCGGCGGCAGAGAAGCCCCTGCGCTGCACGCTTTGCGAACGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 72 bp GGCAGCTGTAGGGCTTGTCGGCCTGTTCAGCAGGGGTaGCAGTGGAAGGCGCGGGTGCTGCGGGAAGCGACG +
Preference number: 6 (lower is better)
Translates to: GSCRACRPVQQG*QWKARVLREAT
Trigger: CGTCGCTTCCCGCAGCACCCGCGCCTTCCACTGTCACCCCTGCTGAACAGGCCGACAAGCCCTACAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp CAGACAGTGTCCCCTGGCTTGGTCTGCAGCACCCCCTaGCCACCCTGGCCCTCCTGCAGCAAGGTGCAGCCA +
Preference number: 6 (lower is better)
Translates to: QTVSPGLVCSTP*PPWPSCSKVQP
Trigger: TGGCTGCACCTTGCTGCAGGAGGGCCAGGGTGGGCAGGGGGTGCTGCAGACCAAGCCAGGGGACACTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp TTGAAGGGCCGCTCGGCCGCGCCGGGCAGGCACTTGTaGCGCAGCAGCTCGGCAGATTGGTCAAAGCCTTTC +
Preference number: 6 (lower is better)
Translates to: LKGRSAAPGRHL*RSSSADWSKPF
Trigger: GAAAGGCTTTGACCAATCTGCCGAGCTGCTGCGGCACAAGTGCCTGCCCGGCGCGGCCGAGCGGCCCTTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp GGTCATGGCCCGCCAGACACTGGTGCTCATGCGGACTaGACAGGTGCGCCAGGTCGTGACCACACACGCCAC +
Preference number: 6 (lower is better)
Translates to: GHGPPDTGAHAD*TGAPGRDHTRH
Trigger: GTGGCGTGTGTGGTCACGACCTGGCGCACCTGTCCAGTCCGCATGAGCACCAGTGTCTGGCGGGCCATGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 72 bp GCCACGTCTAGGAAGCGCTCCCCGCACCATACACACTaGAACTGCTGCTCGCGGGCGTGCACGCCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: ATSRKRSPHHTH*NCCSRACTPWC
Trigger: GCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 72 bp CCACGTCTAGGAAGCGCTCCCCGCACCATACACACTTaGACTGCTGCTCGCGGGCGTGCACGCCCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: PRLGSAPRTIHT*TAARGRARPGA
Trigger: AGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp ACTCGGAAGAGGAGAAGAAGCGGCGTTCGCAAAGCGTaGAGCGCAGGGGCTTCTCTGCCGCCGCACAGTGGG +
Preference number: 6 (lower is better)
Translates to: TRKRRRSGVRKA*SAGASLPPHSG
Trigger: CCCACTGTGCGGCGGCAGAGAAGCCCCTGCGCTGCACGCTTTGCGAACGCCGCTTCTTCTCCTCTTCCGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp GTGCACTGGAATGAGCGGTCATGGCCCGCCAGACACTaGTGCTCATGCGGACTGGACAGGTGCGCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: VHWNERSWPARH*CSCGLDRCARS
Trigger: CGACCTGGCGCACCTGTCCAGTCCGCATGAGCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 72 bp TGGTGCTCATGCGGACTGGACAGGTGCGCCAGGTCGTaGCCACACACGCCACATTTGGGGCCTGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: WCSCGLDRCARS*PHTPHLGPGSP
Trigger: AGGAGAGCCAGGCCCCAAATGTGGCGTGTGTGGTCACGACCTGGCGCACCTGTCCAGTCCGCATGAGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp GGGAAGCGACGGGGCGGCTGTGGTGGCTGGCTCCGCTaGCTCAGCTGGCTTGTAGGTCTTTTCACAGATGGA +
Preference number: 6 (lower is better)
Translates to: GKRRGGCGGWLR*LSWLVGLFTDG
Trigger: TCCATCTGTGAAAAGACCTACAAGCCAGCTGAGGCAGCGGAGCCAGCCACCACAGCCGCCCCGTCGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp TTGAGTGGCTTCTCGCGGGCCGGATCGCAGCGGTGCTaGACGAACTCGGAAGAGGAGAAGAAGCGGCGTTCG +
Preference number: 6 (lower is better)
Translates to: LSGFSRAGSQRC*TNSEEEKKRRS
Trigger: CGAACGCCGCTTCTTCTCCTCTTCCGAGTTCGTGCAGCACCGCTGCGATCCGGCCCGCGAGAAGCCACTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp CACTTGAGTGGCTTCTCGCGGGCCGGATCGCAGCGGTaGTGCACGAACTCGGAAGAGGAGAAGAAGCGGCGT +
Preference number: 6 (lower is better)
Translates to: HLSGFSRAGSQR*CTNSEEEKKRR
Trigger: ACGCCGCTTCTTCTCCTCTTCCGAGTTCGTGCAGCACCGCTGCGATCCGGCCCGCGAGAAGCCACTCAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp CCGCACCATACACACTTGAACTGCTGCTCGCGGGCGTaGACGCCCTGGTGCTTGTTGAGATGCTCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PHHTHLNCCSRA*TPWCLLRCSRC
Trigger: GCAGCGGGAGCATCTCAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 90 bp TCCCCACTTGGCGTGCACGGGTGCTGCAGCAGCTCCGACGACTCCTaGAAATGCAACTCGCACACGTTGCAGCGGAACAGGTGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: SPLGVHGCCSSSDDS*KCNSHTLQRNRWCS
Trigger: CGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGCAGCACCCGTGCACGCCAAGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp CACTTGAACTGCTGCTCGCGGGCGTGCACGCCCTGGTaGTTGTTGAGATGCTCCCGCTGCTTGAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: HLNCCSRACTPW*LLRCSRCLKAL
Trigger: CAAGGCCTTCAAGCAGCGGGAGCATCTCAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp TCTAGGAAGCGCTCCCCGCACCATACACACTTGAACTaGTGCTCGCGGGCGTGCACGCCCTGGTGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SRKRSPHHTHLN*CSRACTPWCLL
Trigger: CAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 72 bp AGCTCCGACGACTCCTTGAAATGCAACTCGCACACGTaGCAGCGGAACAGGTGGTGCTCGCCCGAGTGCGCG +
Preference number: 6 (lower is better)
Translates to: SSDDSLKCNSHT*QRNRWCSPECA
Trigger: CGCGCACTCGGGCGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 72 bp GGCGTGCACGGGTGCTGCAGCAGCTCCGACGACTCCTaGAAATGCAACTCGCACACGTTGCAGCGGAACAGG +
Preference number: 6 (lower is better)
Translates to: GVHGCCSSSDDS*KCNSHTLQRNR
Trigger: CCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGCAGCACCCGTGCACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 72 bp GCCGGGCAGGCACTTGTGCCGCAGCAGCTCGGCAGATaGGTCAAAGCCTTTCTGGCACACGGGGCACTTGAA +
Preference number: 6 (lower is better)
Translates to: AGQALVPQQLGR*VKAFLAHGALE
Trigger: TTCAAGTGCCCCGTGTGCCAGAAAGGCTTTGACCAATCTGCCGAGCTGCTGCGGCACAAGTGCCTGCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 72 bp TGTACCCGCCGGTGCCGCTGCAGGTCTGACGCGTACTaGAAGCGTTTCTCGCAGTCTGGGCACTTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: CTRRCRCRSDAY*KRFSQSGHLSG
Trigger: GCCACTCAAGTGCCCAGACTGCGAGAAACGCTTCAAGTACGCGTCAGACCTGCAGCGGCACCGGCGGGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 90 bp TGCTGCAGCAGCTCCGACGACTCCTTGAAATGCAACTCGCACACGTaGCAGCGGAACAGGTGGTGCTCGCCCGAGTGCGCGTACATGTGG +
Preference number: 6 (lower is better)
Translates to: CCSSSDDSLKCNSHT*QRNRWCSPECAYMW
Trigger: CCACATGTACGCGCACTCGGGCGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 90 bp TGCAACAAGGCCACGTCTAGGAAGCGCTCCCCGCACCATACACACTaGAACTGCTGCTCGCGGGCGTGCACGCCCTGGTGCTTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: CNKATSRKRSPHHTH*NCCSRACTPWCLLR
Trigger: TCTCAACAAGCACCAGGGCGTGCACGCCCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGGCCTTGTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp CAGACGAAGGGCTTCTGCTCAGCCTGCACGCACTGGTaGTCCAGCAGGTCAGTGGCCTGGTGGAAGATCTTG +
Preference number: 6 (lower is better)
Translates to: QTKGFCSACTHW*SSRSVAWWKIL
Trigger: CAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACCAGTGCGTGCAGGCTGAGCAGAAGCCCTTCGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp CACGGGTGCTGCAGCAGCTCCGACGACTCCTTGAAATaGAACTCGCACACGTTGCAGCGGAACAGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: HGCCSSSDDSLK*NSHTLQRNRWC
Trigger: GCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGCAGCACCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp TTGAAATGCAACTCGCACACGTTGCAGCGGAACAGGTaGTGCTCGCCCGAGTGCGCGTACATGTGGCGCACC +
Preference number: 6 (lower is better)
Translates to: LKCNSHTLQRNR*CSPECAYMWRT
Trigger: GGTGCGCCACATGTACGCGCACTCGGGCGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 90 bp TGCACGCACTGGTGCTCCAGCAGGTCAGTGGCCTGGTGGAAGATCTaGAGACACTGTGTGCACTGGAATGAGCGGTCATGGCCCGCCAGA +
Preference number: 6 (lower is better)
Translates to: CTHWCSSRSVAWWKI*RHCVHWNERSWPAR
Trigger: TCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACCAGTGCGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 72 bp GGCCACTGTGGGAGCTGTGGTGCTGTGCCAGTGAGGTaGGTAGTGAGAAGCCCATCTTGCAGACCCCACAGA +
Preference number: 6 (lower is better)
Translates to: GHCGSCGAVPVR*VVRSPSCRPHR
Trigger: TCTGTGGGGTCTGCAAGATGGGCTTCTCACTACTCACCTCACTGGCACAGCACCACAGCTCCCACAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp GTGGCCTGGTGGAAGATCTTGAGACACTGTGTGCACTaGAATGAGCGGTCATGGCCCGCCAGACACTGGTGC +
Preference number: 6 (lower is better)
Translates to: VAWWKILRHCVH*NERSWPARHWC
Trigger: GCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 72 bp GGTGCTCCAGCAGGTCAGTGGCCTGGTGGAAGATCTTaGGACACTGTGTGCACTGGAATGAGCGGTCATGGC +
Preference number: 6 (lower is better)
Translates to: GAPAGQWPGGRS*DTVCTGMSGHG
Trigger: GCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp ATCTTGAGACACTGTGTGCACTGGAATGAGCGGTCATaGCCCGCCAGACACTGGTGCTCATGCGGACTGGAC +
Preference number: 6 (lower is better)
Translates to: ILRHCVHWNERS*PARHWCSCGLD
Trigger: GTCCAGTCCGCATGAGCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 72 bp TGCTGTGCCAGTGAGGTGAGTAGTGAGAAGCCCATCTaGCAGACCCCACAGACGAAGGGCTTCTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: CCASEVSSEKPI*QTPQTKGFCSA
Trigger: GGCTGAGCAGAAGCCCTTCGTCTGTGGGGTCTGCAAGATGGGCTTCTCACTACTCACCTCACTGGCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS TCA 72 bp CTGGTGGAAGATCTTGAGACACTGTGTGCACTGGAATaGGCGGTCATGGCCCGCCAGACACTGGTGCTCATG +
Preference number: 6 (lower is better)
Translates to: LVEDLETLCALE*AVMARQTLVLM
Trigger: CATGAGCACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS GCA 72 bp ATGGAACACTTCACCAGGCCACTGTGGGAGCTGTGGTaGTGTGCCAGTGAGGTGAGTAGTGAGAAGCCCATC +
Preference number: 6 (lower is better)
Translates to: MEHFTRPLWELW*CASEVSSEKPI
Trigger: GATGGGCTTCTCACTACTCACCTCACTGGCACAGCACCACAGCTCCCACAGTGGCCTGGTGAAGTGTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CCA 72 bp TGCACGCACTGGTGCTCCAGCAGGTCAGTGGCCTGGTaGAAGATCTTGAGACACTGTGTGCACTGGAATGAG +
Preference number: 6 (lower is better)
Translates to: CTHWCSSRSVAW*KILRHCVHWNE
Trigger: CTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACCAGTGCGTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 72 bp TGGTGCTCCAGCAGGTCAGTGGCCTGGTGGAAGATCTaGAGACACTGTGTGCACTGGAATGAGCGGTCATGG +
Preference number: 6 (lower is better)
Translates to: WCSSRSVAWWKI*RHCVHWNERSW
Trigger: CCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCACTGACCTGCTGGAGCACCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299237.3
CDS CAA 90 bp GGCTGTTGCCAGCTTTCCGACATGCTTGGGAAGATGAAACAGGGTTaGGAGAGTAATGGCTTCAGTTTCCCGCTTCACGTGACCCAATCC +
Preference number: 6 (lower is better)
Translates to: GCCQLSDMLGKMKQG*ESNGFSFPLHVTQS
Trigger: GGATTGGGTCACGTGAAGCGGGAAACTGAAGCCATTACTCTCCAAACCCTGTTTCATCTTCCCAAGCATGTCGGAAAGCTGGCAACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1
CDS TCA 72 bp GTTTGGAGAGTAATGGCTTCAGTTTCCCGCTTCACGTaGCCCAATCCAGAGAGAGAAGCTGCCCAATCACAG +
Preference number: 6 (lower is better)
Translates to: VWRVMASVSRFT*PNPEREAAQSQ
Trigger: CTGTGATTGGGCAGCTTCTCTCTCTGGATTGGGTCACGTGAAGCGGGAAACTGAAGCCATTACTCTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1
CDS CAA 72 bp CAGCTTTCCGACATGCTTGGGAAGATGAAACAGGGTTaGGAGAGTAATGGCTTCAGTTTCCCGCTTCACGTG +
Preference number: 6 (lower is better)
Translates to: QLSDMLGKMKQG*ESNGFSFPLHV
Trigger: CACGTGAAGCGGGAAACTGAAGCCATTACTCTCCAAACCCTGTTTCATCTTCCCAAGCATGTCGGAAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299237.3
ENST00000562909.1