RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF316 (Homo sapiens)

Ensembl gene IDs: ENSG00000205903

Ensembl transcript IDs: ENST00000382252.6, ENST00000427912.2, ENST00000614588.1

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGGGGCTCAGGGCTGCGAGGGCCTCGGGCGCCCGTAGATGTCTaGGTTTGCCACCTCCGGCTGAGGGAGACGAAAGTACCAAGGACT +
Preference number: 1 (lower is better)
Translates to: SWGSGLRGPRAPVDV*VCHLRLRETKVPRT
Trigger: AGTCCTTGGTACTTTCGTCTCCCTCAGCCGGAGGTGGCAAACTCAGACATCTACGGGCGCCCGAGGCCCTCGCAGCCCTGAGCCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp GGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTaGCCTGGGGCCAACTCCTCATGGGCCATCCTAGGACCCATTCTA +
Preference number: 1 (lower is better)
Translates to: GPPRNTVGMGSTGPH*PGANSSWAILGPIL
Trigger: TAGAATGGGTCCTAGGATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp CCTTCGGGACAGACTCGGATGACCGGGAGGGCCCAAGTCTCTCACTaGGGAATGGGAAGAAGTGGTCAGCCAAACCCACCGGCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: PSGQTRMTGRAQVSH*GMGRSGQPNPPASQ
Trigger: CTGGGAGGCCGGTGGGTTTGGCTGACCACTTCTTCCCATTCCTCAGTGAGAGACTTGGGCCCTCCCGGTCATCCGAGTCTGTCCCGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp GCCTCCCCTCGCCGCGCGCAGTTAAACCTTCGGGACAGACTCGGATaGCCGGGAGGGCCCAAGTCTCTCACTGAGGAATGGGAAGAAGTG +
Preference number: 1 (lower is better)
Translates to: ASPRRAQLNLRDRLG*PGGPKSLTEEWEEV
Trigger: CACTTCTTCCCATTCCTCAGTGAGAGACTTGGGCCCTCCCGGTCATCCGAGTCTGTCCCGAAGGTTTAACTGCGCGCGGCGAGGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp TGGGATGTGGGGAAAGATCCTTCGACCAACCTCAGTCGCTCTAAGTaGGCGCTGGGCTCCGAGAACGGGGCGTCTGCCTGCTCCCGGAGA +
Preference number: 1 (lower is better)
Translates to: WDVGKDPSTNLSRSK*ALGSENGASACSRR
Trigger: TCTCCGGGAGCAGGCAGACGCCCCGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTTTCCCCACATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp TCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGTAGGTGAGCCCTaGATGAGCCACATGGTGCTGGGGCCTCTGAAGAAAGGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: SWGCTPCPGTGVGEP*MSHMVLGPLKKGLG
Trigger: CCCCAGCCCTTTCTTCAGAGGCCCCAGCACCATGTGGCTCATCCAGGGCTCACCTACTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 90 bp CGGAATCCGAGTGAAATAAATAGCATCGCCCGCCAACTACCGCCCTaGTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTG +
Preference number: 1 (lower is better)
Translates to: RNPSEINSIARQLPP*FTARAHPGDIAVSV
Trigger: CACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTAGTTGGCGGGCGATGCTATTTATTTCACTCGGATTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp AACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTaGGTAGAGAAGAGGAGGCGGCTCGAGAATAAGGCTTCAAACTCC +
Preference number: 1 (lower is better)
Translates to: NRTGAEGAGVTSVQV*VEKRRRLENKASNS
Trigger: GGAGTTTGAAGCCTTATTCTCGAGCCGCCTCCTCTTCTCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp TTGGACCTGAGGCCGCGCAGAGCCTCCCCGACGGGTTCCCAGGAGTaGCGACAGCATGGAGTCCAGTCAGAAGTTCAGTTTGTCCACTCT +
Preference number: 1 (lower is better)
Translates to: LDLRPRRASPTGSQE*RQHGVQSEVQFVHS
Trigger: AGAGTGGACAAACTGAACTTCTGACTGGACTCCATGCTGTCGCCACTCCTGGGAACCCGTCGGGGAGGCTCTGCGCGGCCTCAGGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp ACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCCTaGGGCCAACTCCTCATGGGCCATCCTAGGACCCATTCTAATTTC +
Preference number: 1 (lower is better)
Translates to: TKEYGGHGQHGATLA*GQLLMGHPRTHSNF
Trigger: GAAATTAGAATGGGTCCTAGGATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp CTGAGTTTGCCACCTCCGGCTGAGGGAGACGAAAGTACCAAGGACTaGGAGGACAAGCAGAGACCAAAACCGAACCGGTGCGGAGGGTGC +
Preference number: 1 (lower is better)
Translates to: LSLPPPAEGDESTKD*EDKQRPKPNRCGGC
Trigger: GCACCCTCCGCACCGGTTCGGTTTTGGTCTCTGCTTGTCCTCTCAGTCCTTGGTACTTTCGTCTCCCTCAGCCGGAGGTGGCAAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 90 bp GCCCCTCCCTCGCCGCCACACCCGGTTGCAAACACACAAATCCCTTaGTCCCCAGACCACCCAAGTCGGAATCCGAGTGAAATAAATAGC +
Preference number: 1 (lower is better)
Translates to: APPSPPHPVANTQIP*SPDHPSRNPSEINS
Trigger: GCTATTTATTTCACTCGGATTCCGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGCGAGGGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp GCCGCGCAGAGCCTCCCCGACGGGTTCCCAGGAGTGGCGACAGCATaGAGTCCAGTCAGAAGTTCAGTTTGTCCACTCTTTATTAAAGCC +
Preference number: 1 (lower is better)
Translates to: AAQSLPDGFPGVATA*SPVRSSVCPLFIKA
Trigger: GGCTTTAATAAAGAGTGGACAAACTGAACTTCTGACTGGACTCCATGCTGTCGCCACTCCTGGGAACCCGTCGGGGAGGCTCTGCGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp AGAGACAAGAGTTTTGCCGTGTTGTCCCAGCTGGCCTCGAACTCCTaGGCTCAAGGAATCCATCTGAGCTCAAGGGATCCGCCTTGGCCT +
Preference number: 1 (lower is better)
Translates to: RDKSFAVLSQLASNS*AQGIHLSSRDPPWP
Trigger: AGGCCAAGGCGGATCCCTTGAGCTCAGATGGATTCCTTGAGCTCAGGAGTTCGAGGCCAGCTGGGACAACACGGCAAAACTCTTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp GCCTGGCTGCTGCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTaGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATC +
Preference number: 1 (lower is better)
Translates to: AWLLRSAPKAMSTLT*RELGLLGNAAAPKI
Trigger: GATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGCAGCAGCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp ATGACAGAAGCAGAGTTAAAGGGACCTGCGAGTGTCCTAGGGCCCTaGTTATGGGATGTGGGGAAAGATCCTTCGACCAACCTCAGTCGC +
Preference number: 1 (lower is better)
Translates to: MTEAELKGPASVLGP*LWDVGKDPSTNLSR
Trigger: GCGACTGAGGTTGGTCGAAGGATCTTTCCCCACATCCCATAATCAGGGCCCTAGGACACTCGCAGGTCCCTTTAACTCTGCTTCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp AGTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTaGAGCTCCGCCCTTTGGAAACCTACAAGGCCTCCCCTCGCCGCG +
Preference number: 1 (lower is better)
Translates to: SGNKYPQTTSFKFSH*SSALWKPTRPPLAA
Trigger: CGCGGCGAGGGGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 90 bp GGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTAGGGAATaGAGCTGCACCAAAAATCCGTTTCCTGGCCCCATTCACAGTGGC +
Preference number: 1 (lower is better)
Translates to: GHVYTNVEGTRSIRE*SCTKNPFPGPIHSG
Trigger: GCCACTGTGAATGGGGCCAGGAAACGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 90 bp CTGTCAACACCCGCGACCCGTCTGCCTGGCCGTAAGTTTGGTATCTaGCTTTTTCTCCTCCTAGATTCTTCAGGCCATACAAGAAGTGGA +
Preference number: 1 (lower is better)
Translates to: LSTPATRLPGRKFGI*LFLLLDSSGHTRSG
Trigger: TCCACTTCTTGTATGGCCTGAAGAATCTAGGAGGAGAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp AAAGTGACGCTCAGGGCTGAGGGACCCTCTAAGTGCCACCTTTCGTaGCTCACATTTCACAAGTCACTAGGGTTTAATTCCTCCTTGGCA +
Preference number: 1 (lower is better)
Translates to: KVTLRAEGPSKCHLS*LTFHKSLGFNSSLA
Trigger: TGCCAAGGAGGAATTAAACCCTAGTGACTTGTGAAATGTGAGTCACGAAAGGTGGCACTTAGAGGGTCCCTCAGCCCTGAGCGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp ACTGTGCAAGCTGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTaGAATGGGACTCTAAACAGAAACACTACTTGTTCTAGTGTAATG +
Preference number: 1 (lower is better)
Translates to: TVQAARPRVPPLTNL*NGTLNRNTTCSSVM
Trigger: CATTACACTAGAACAAGTAGTGTTTCTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCAGCTTGCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 90 bp AAAGAAGCATTAGATTGCTCTGTTCTGATGCCTCCAGATCACATTTaGTTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAG +
Preference number: 1 (lower is better)
Translates to: KEALDCSVLMPPDHI*LQQFLFFRPTKKGQ
Trigger: CTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGTGATCTGGAGGCATCAGAACAGAGCAATCTAATGCTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR TCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGCCCCACGTCTCCGGCTaGGCACACGGACCCGGCGGG +
Preference number: 2 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRPHVSG*AHGPGG
Trigger: CCCGCCGGGTCCGTGTGCTCAGCCGGAGACGTGGGG...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCACCCGCCCCCAGCCCTaGCAGCCTGGCTGCTGCGCT +
Preference number: 2 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGTRPQP*QPGCCA
Trigger: AGCGCAGCAGCCAGGCTGCCAGGGCTGGGGGCGGGT...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCCGAGAACGGGGCGTCTaGCTGCTCCCGGAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIRERGV*LLPERG
Trigger: GCCCCTCTCCGGGAGCAGGCAGACGCCCCGTTCTCG...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGCAAGGGAGGGGCCGGTaGCCCTGCAGGCTGCGCTGC +
Preference number: 2 (lower is better)
Translates to: YRPASQPGPTQGISQSPWQGRGR*PCRLRC
Trigger: GCAGCGCAGCCTGCAGGGCCACCGGCCCCTCCCTTG...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGTCCCAGGCATCCCGCTaGCCCACCTGGGTGGCCGGG +
Preference number: 2 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRSQASR*PTWVAG
Trigger: CCCGGCCACCCAGGTGGGCCAGCGGGATGCCTGGGA...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCAGGGGCCGGTGGCCCTaGAGGCTGCGCTGCTGTCGG +
Preference number: 2 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCRGRWP*RLRCCR
Trigger: CCGACAGCAGCGCAGCCTGCAGGGCCACCGGCCCCT...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCTCGCTGCCTCCGCGCTaGTCTTCTCCCCAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: GMGSTGPHWPGANSSWAISLPPR*SSPQSS
Trigger: GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGA...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCACGTCCTGGCCTCGCTaGCTCCGCGCTGCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: GMGSTGPHWPGANSSWAITSWPR*LRAALL
Trigger: GAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGT...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR TCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGACGGGACAGACTCGGATaGCCGGGAGGGCCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRRDRLG*PGGPKS
Trigger: AGACTTGGGCCCTCCCGGTCATCCGAGTCTGTCCCG...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCCGCCAACTACCGCCCTaGTTCACAGCCCGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: MGLHMNYTPAARPVASMGRQLPP*FTARAH
Trigger: GTGGGCCCGGGCTGTGAAGCAGGGCGGTAGTTGGCG...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCCCAAAACCGAACCGGTaGGGAGGGTGCCGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: MGLHMNYTPAARPVASMGPKPNR*GGCRGD
Trigger: GTCACCCCGGCACCCTCCGCACCGGTTCGGTTTTGG...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR TCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGCCGCAGGGCGAGGGCTaGGGGAAGGCACCGCACCCA +
Preference number: 2 (lower is better)
Translates to: CQATGASTNQFVKWDSKQPQGEG*GKAPHP
Trigger: TGGGTGCGGTGCCTTCCCTCAGCCCTCGCCCTGCGG...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGAGCACGGGGCCACACTaGCCTGGGGCCAACTCCTCA +
Preference number: 2 (lower is better)
Translates to: FKGGILGPGAVHLALVLESTGPH*PGANSS
Trigger: TGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCT...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGAACGGGGCGTCTGCCTaGTCCCGGAGAGGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVNGASA*SRRGAA
Trigger: GGCTGCCCCTCTCCGGGAGCAGGCAGACGCCCCGTT...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCTTCAAGTTTTCCCACTaGAGCTCCGCCCTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCFKFSH*SSALWK
Trigger: TTTCCAAAGGGCGGAGCTCCAGTGGGAAAACTTGAA...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCATGTCTACACTAACGTaGAGGGAACTAGGTCTATTA +
Preference number: 2 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIMSTLT*RELGLL
Trigger: TAATAGACCTAGTTCCCTCCACGTTAGTGTAGACAT...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CAA 90 bp TCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCCCTTaGGAAACCTACAAGGCCTCCCCTCGCCGCGCGCAGTTAAACCTT +
Preference number: 2 (lower is better)
Translates to: SADDKFQVFPLELRP*ETYKASPRRAQLNL
Trigger: AAGGTTTAACTGCGCGCGGCGAGGGGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCACCGCACCCAGGACTaGGACCCTCAGCCTCCCGGG +
Preference number: 2 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPHRTQD*DPQPPG
Trigger: CCCGGGAGGCTGAGGGTCCCAGTCCTGGGTGCGGTG...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCCCTGATTATGGGATGTaGGGAAAGATCCTTCGACCA +
Preference number: 2 (lower is better)
Translates to: MGLHMNYTPAARPVASMGPDYGM*GKILRP
Trigger: TGGTCGAAGGATCTTTCCCCACATCCCATAATCAGG...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR TCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCAGCGCCCGTAGATGTCTaGGTTTGCCACCTCCGGCTG +
Preference number: 2 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPAPVDV*VCHLRL
Trigger: CAGCCGGAGGTGGCAAACTCAGACATCTACGGGCGC...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCAGCTCTAAGTGAGCGCTaGGCTCCGAGAACGGGGCGT +
Preference number: 2 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPALSER*APRTGR
Trigger: ACGCCCCGTTCTCGGAGCCCAGCGCTCACTTAGAGC...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR TCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGTGCCTGGTTTGTCACTaGGCCACGGCTCAGGTCCAC +
Preference number: 2 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPCLVCH*ATAQVH
Trigger: GTGGACCTGAGCCGTGGCTCAGTGACAAACCAGGCA...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGTCTCTCACTGAGGAATaGGAAGAAGTGGTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: KILRPTSVALSERWAPRTSLTEE*EEVVSQ
Trigger: TTGGCTGACCACTTCTTCCCATTCCTCAGTGAGAGA...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGACCAGGCAGGGGCCTTaGATAGTTGGGTGCCTGGTT +
Preference number: 2 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPTRQGP*IVGCLV
Trigger: AACCAGGCACCCAACTATGCAAGGCCCCTGCCTGGT...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCATGGAGCTCCGCCCTTTaGAAACCTACAAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPWSSAL*KPTRPP
Trigger: GGGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCA...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CAA 90 bp TGTCTGCCACTCAAACGTCTGTTTCAGACATGGAGTCTTGATACGTaGCCCAGGTTGGCCTTGAATTTCTGGTCTCAGGCGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: CLPLKRLFQTWSLDT*PRLALNFWSQAILP
Trigger: TGGGAGGATCGCCTGAGACCAGAAATTCAAGGCCAACCTGGGCAACGTATCAAGACTCCATGTCTGAAACAGACGTTTGAGTGGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR TCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCATTTGCCACCTCCGGCTaGGGGAGACGAAAGTACCAA +
Preference number: 2 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPFATSG*GRRKYQ
Trigger: TTGGTACTTTCGTCTCCCTCAGCCGGAGGTGGCAAA...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR TCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGGAAAGTACCAAGGACTaGGAGGACAAGCAGAGACCA +
Preference number: 2 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVESTKD*EDKQRP
Trigger: TGGTCTCTGCTTGTCCTCTCAGTCCTTGGTACTTTC...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGAACACACAAATCCCTTaGTCCCCAGACCACCCAAGT +
Preference number: 2 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVNTQIP*SPDHPS
Trigger: ACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTT...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGAAACCGGTGCGGAGGGTaGCGGGGTGACCTCGGTGCA +
Preference number: 2 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRNRCGG*RGDLGA
Trigger: TGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTT...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGAACCCACCAACTACCGTaGCTCCTACCCGCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRTHQLP*LLPAPS
Trigger: GCTGGGGGCGGGTAGGAGGCACGGTAGTTGGTGGGT...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGAGGAGTAGGTGAGCCCTaGATGAGCCACATGGTGCTG +
Preference number: 2 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRGVGEP*MSHMVL
Trigger: CAGCACCATGTGGCTCATCCAGGGCTCACCTACTCC...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR GCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGAGCCGCCACACCCGGTTaGAAACACACAAATCCCTTG +
Preference number: 2 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRAATPG*KHTNPL
Trigger: CAAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGC...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CAA 90 bp AAAAGAAGCATTAGATTGCTCTGTTCTGATGCCTCCAGATCACATTaGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACA +
Preference number: 2 (lower is better)
Translates to: KRSIRLLCSDASRSH*ITAVLIFQTHKERT
Trigger: TGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGTGATCTGGAGGCATCAGAACAGAGCAATCTAATGCTTCTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp GGGCCCACCCAGGGGATATCGCAGTCTCCGTGGGGGTaGCGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: GPTQGISQSPWG*RPGLAASALLF
Trigger: GAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCCACGGAGACTGCGATATCCCCTGGGTGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 72 bp GGGTGGCCGGGCCCCTCCCTCGCCGCCACACCCGGTTaGAAACACACAAATCCCTTGCTCCCCAGACCACCC +
Preference number: 3 (lower is better)
Translates to: GWPGPSLAATPG*KHTNPLLPRPP
Trigger: GGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGCGAGGGAGGGGCCCGGCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp TCAGGGCTGCGAGGGCCTCGGGCGCCCGTAGATGTCTaGGTTTGCCACCTCCGGCTGAGGGAGACGAAAGTA +
Preference number: 3 (lower is better)
Translates to: SGLRGPRAPVDV*VCHLRLRETKV
Trigger: TACTTTCGTCTCCCTCAGCCGGAGGTGGCAAACTCAGACATCTACGGGCGCCCGAGGCCCTCGCAGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp GGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTaGGTAGAGAAGAGGAGGCGGCTCGAGAATAAGGCT +
Preference number: 3 (lower is better)
Translates to: GAEGAGVTSVQV*VEKRRRLENKA
Trigger: AGCCTTATTCTCGAGCCGCCTCCTCTTCTCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp ATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTaGGCTCCGAGAACGGGGCGTCTGCCTGCTCCCGGA +
Preference number: 3 (lower is better)
Translates to: ILRPTSVALSER*APRTGRLPAPG
Trigger: TCCGGGAGCAGGCAGACGCCCCGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp GGCTGGGGATGTGTTTGGACCACCACGAAGGGTACCTaGCCCCTCACTCTGGCCTCTGGAAGCCTGGCCAAC +
Preference number: 3 (lower is better)
Translates to: GWGCVWTTTKGT*PLTLASGSLAN
Trigger: GTTGGCCAGGCTTCCAGAGGCCAGAGTGAGGGGCCAGGTACCCTTCGTGGTGGTCCAAACACATCCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CAA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCCGCCGCCACACCCGGTaGCAAACACACAAATCCCTT +
Preference number: 3 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCRRHTR*QTHKSL
Trigger: AAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGCG...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp CGCCGCGCGCAGTTAAACCTTCGGGACAGACTCGGATaGCCGGGAGGGCCCAAGTCTCTCACTGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: RRAQLNLRDRLG*PGGPKSLTEEW
Trigger: CCATTCCTCAGTGAGAGACTTGGGCCCTCCCGGTCATCCGAGTCTGTCCCGAAGGTTTAACTGCGCGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp GGGAAAGATCCTTCGACCAACCTCAGTCGCTCTAAGTaGGCGCTGGGCTCCGAGAACGGGGCGTCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: GKDPSTNLSRSK*ALGSENGASAC
Trigger: GCAGGCAGACGCCCCGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp AGGCCGCGCAGAGCCTCCCCGACGGGTTCCCAGGAGTaGCGACAGCATGGAGTCCAGTCAGAAGTTCAGTTT +
Preference number: 3 (lower is better)
Translates to: RPRRASPTGSQE*RQHGVQSEVQF
Trigger: AAACTGAACTTCTGACTGGACTCCATGCTGTCGCCACTCCTGGGAACCCGTCGGGGAGGCTCTGCGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 72 bp GACAAGCAGAGACCAAAACCGAACCGGTGCGGAGGGTaGCGGGGTGACCTCGGTGCAAGTGTGGGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: DKQRPKPNRCGG*RGDLGASVGRE
Trigger: TTCTCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTTTGGTCTCTGCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp CAGACTCGGATGACCGGGAGGGCCCAAGTCTCTCACTaGGGAATGGGAAGAAGTGGTCAGCCAAACCCACCG +
Preference number: 3 (lower is better)
Translates to: QTRMTGRAQVSH*GMGRSGQPNPP
Trigger: CGGTGGGTTTGGCTGACCACTTCTTCCCATTCCTCAGTGAGAGACTTGGGCCCTCCCGGTCATCCGAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 72 bp AGTGAAATAAATAGCATCGCCCGCCAACTACCGCCCTaGTTCACAGCCCGGGCCCACCCAGGGGATATCGCA +
Preference number: 3 (lower is better)
Translates to: SEINSIARQLPP*FTARAHPGDIA
Trigger: TGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTAGTTGGCGGGCGATGCTATTTATTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp GTCAGGTGTTTACACTACATCAAGTGTGGGGCAGCGTaGGGGCCACCAAGGAATACGGTGGGCATGGGCAGC +
Preference number: 3 (lower is better)
Translates to: VRCLHYIKCGAA*GPPRNTVGMGS
Trigger: GCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACGCTGCCCCACACTTGATGTAGTGTAAACACCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp CCACCTCCGGCTGAGGGAGACGAAAGTACCAAGGACTaGGAGGACAAGCAGAGACCAAAACCGAACCGGTGC +
Preference number: 3 (lower is better)
Translates to: PPPAEGDESTKD*EDKQRPKPNRC
Trigger: GCACCGGTTCGGTTTTGGTCTCTGCTTGTCCTCTCAGTCCTTGGTACTTTCGTCTCCCTCAGCCGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 72 bp TCGCCGCCACACCCGGTTGCAAACACACAAATCCCTTaGTCCCCAGACCACCCAAGTCGGAATCCGAGTGAA +
Preference number: 3 (lower is better)
Translates to: SPPHPVANTQIP*SPDHPSRNPSE
Trigger: TTCACTCGGATTCCGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 72 bp ACTCCCTCAGGACCCTGTCAACACCCGCGACCCGTCTaGCTGGCCGTAAGTTTGGTATCTGGCTTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: TPSGPCQHPRPV*LAVSLVSGFFS
Trigger: GGAGAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACAGGGTCCTGAGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp ACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCCCTTTaGAAACCTACAAGGCCTCCCCTCGCCGCGCGCAGT +
Preference number: 3 (lower is better)
Translates to: TSFKFSHWSSAL*KPTRPPLAARS
Trigger: ACTGCGCGCGGCGAGGGGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCAGTGGGAAAACTTGAAACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp AGCCTCCCCGACGGGTTCCCAGGAGTGGCGACAGCATaGAGTCCAGTCAGAAGTTCAGTTTGTCCACTCTTT +
Preference number: 3 (lower is better)
Translates to: SLPDGFPGVATA*SPVRSSVCPLF
Trigger: AAAGAGTGGACAAACTGAACTTCTGACTGGACTCCATGCTGTCGCCACTCCTGGGAACCCGTCGGGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp TGTACACCTTGCCCTGGTACTGGAGTAGGTGAGCCCTaGATGAGCCACATGGTGCTGGGGCCTCTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: CTPCPGTGVGEP*MSHMVLGPLKK
Trigger: TTTCTTCAGAGGCCCCAGCACCATGTGGCTCATCCAGGGCTCACCTACTCCAGTACCAGGGCAAGGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp CTGCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTaGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: LRSAPKAMSTLT*RELGLLGNAAA
Trigger: TGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CAA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTAAACACACAAATCCCTaGCTCCCCAGACCACCCAAG +
Preference number: 3 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSIKHTNP*LPRPPK
Trigger: CTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTT...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CCA 72 bp AAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTaGAGCTCCGCCCTTTGGAAACCTACAAGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: KYPQTTSFKFSH*SSALWKPTRPP
Trigger: GGGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR-3UTR CAA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGTGCCTGGCCGTAAGTTaGGTATCTGGCTTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVCLAVS*VSGFFS
Trigger: GGAGAAAAAGCCAGATACCAAACTTACGGCCAGGCA...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp CTCAGGGCTGAGGGACCCTCTAAGTGCCACCTTTCGTaGCTCACATTTCACAAGTCACTAGGGTTTAATTCC +
Preference number: 3 (lower is better)
Translates to: LRAEGPSKCHLS*LTFHKSLGFNS
Trigger: GGAATTAAACCCTAGTGACTTGTGAAATGTGAGTCACGAAAGGTGGCACTTAGAGGGTCCCTCAGCCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 72 bp AACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTaGACCAAAAATCCGTTTCCTGGCCCCATTCACAGT +
Preference number: 3 (lower is better)
Translates to: NVEGTRSIRECS*TKNPFPGPIHS
Trigger: ACTGTGAATGGGGCCAGGAAACGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR TCA 72 bp GCTGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTaGAATGGGACTCTAAACAGAAACACTACTTGTTCT +
Preference number: 3 (lower is better)
Translates to: AARPRVPPLTNL*NGTLNRNTTCS
Trigger: AGAACAAGTAGTGTTTCTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR GCA 72 bp TACACTAACGTGGAGGGAACTAGGTCTATTAGGGAATaGAGCTGCACCAAAAATCCGTTTCCTGGCCCCATT +
Preference number: 3 (lower is better)
Translates to: YTNVEGTRSIRE*SCTKNPFPGPI
Trigger: AATGGGGCCAGGAAACGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCCCCCACGTCTCCGGCTaGGCACACGGACCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSPHVSG*AHGPGG
Trigger: CCCGCCGGGTCCGTGTGCTCAGCCGGAGACGTGGGG...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
74% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCTCGGCGTGCGCCCACTaGTGCCGCGTCAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: GMGSTGPHWPGANSSWAISACAH*CRVSAA
Trigger: CGCGGCGCTGACGCGGCATCAGTGGGCGCACGCCGA...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCCCGCAGGGCGAGGGCTaGGGGAAGGCACCGCACCCA +
Preference number: 4 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIPQGEG*GKAPHP
Trigger: TGGGTGCGGTGCCTTCCCTCAGCCCTCGCCCTGCGG...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCCCTCCCCCAGGCCGTTaGCCAGCTCCAGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSPPPGR*PAPGSA
Trigger: GGCGCTTCCTGGAGCTGGGCAACGGCCTGGGGGAGG...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCGCCGTGTGCACCGCCTaGTGCCGTGCCAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGAVCTA*CRASAE
Trigger: CTCGGCGCTGGCACGGCACCAGGCGGTGCACACGGC...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCCAAGGGAGGGGCCGGTaGCCCTGCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIQGRGR*PCRLRC
Trigger: GCAGCGCAGCCTGCAGGGCCACCGGCCCCTCCCTTG...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCCCGCGCTACACAAAGTaGCGGCCCGGGAGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGPRYTK*RPGSCA
Trigger: CGCGCAGCTCCCGGGCCGTCACTTTGTGTAGCGCGG...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCGTCAGGGTCGCACTCTaGCCCGTCCTCTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSVRVAL*PVLCPL
Trigger: GAGCGGGCAGAGGACGGGTCAGAGTGCGACCCTGAC...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGGTGTGCGCGCGCCCGTaGGCCGTCAAGTGCGCGCGA +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRVCARP*AVKCAR
Trigger: TCGCGCGCACTTGACGGCGCACGGGCGCGCGCACAC...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCGGTAGCGCTGGTGCTTaGCCAGCCGCGAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGGSAGA*PAASGA
Trigger: CGCACCGCTCGCGGCTGGCCAAGCACCAGCGCTACC...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGCCAGCAGACCCCCGATaGCGGGCCCGAACGCGCGCA +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWPADPR*RARTRA
Trigger: TGCGCGCGTTCGGGCCCGCCATCGGGGGTCTGCTGG...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGCACTGGACGGCCCCTTaGCGGCCGCCTCGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWHWTAP*RPPRAW
Trigger: CCAAGCCCGAGGCGGCCGCCAAGGGGCCGTCCAGTG...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGCCGTGCGCCGTCAAGTaGGCGCGACGGCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRPCAVK*ARRLNP
Trigger: GGGGTTCAGCCGTCGCGCGCACTTGACGGCGCACGG...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCGCGAACGCGGCCTGGTaGTCGGAGCCGAAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSANAAW*SEPKLV
Trigger: CACAAGCTTCGGCTCCGAGCACCAGGCCGCGTTCGC...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp CGCGCTGCTCTTCTCCCCAGAGCTCCCCCACGTCTCCGGCTGAGCACACGGACCTCTGCCCGCTCCAGCTaGGCAGCTGGGGAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: RAALLPRAPPRLRLSTRTSARSS*AAGESG
Trigger: TCCCGACTCCCCAGCTGCCCAGCTGGAGCGGGCAGA...GGTCCGTGTGCTCAGCCGGAGACGTGGGGGAGCTCTGGGGAGAAGAGCAGCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCTCCCAGGCATCCCGCTaGCCCACCTGGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCSQASR*PTWVAG
Trigger: CCCGGCCACCCAGGTGGGCCAGCGGGATGCCTGGGA...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCCGGGACAGACTCGGATaGCCGGGAGGGCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIRDRLG*PGGPKS
Trigger: AGACTTGGGCCCTCCCGGTCATCCGAGTCTGTCCCG...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGCGGTGGCGCGCCAGGTaGGAGCCGTACACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWRWRAR*EPYTKL
Trigger: GAGCTTCGTGTACGGCTCGCACCTGGCGCGCCACCG...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCTGGAAGCCCAGCGGGTaGGAGGAGGGGCCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCWKPSG*EEGPSP
Trigger: GGGCGAAGGCCCCTCCTCCCACCCGCTGGGCTTCCA...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGGGTGCTTGGCCAGGTTaGAGCGCTGCGCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRGAWPG*SAARSR
Trigger: GCGGCTTCGCGCAGCGCTCCAACCTGGCCAAGCACC...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCAGCCCGGCGCTGCGGTaGCTCCGCGGTGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCSPALR*LRGASS
Trigger: TGAAGACGCACCGCGGAGCCACCGCAGCGCCGGGCT...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCGCGTGCGCTGGTGCGTaGCCAGGTAGGAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGACAGA*PGRSGA
Trigger: GGCGCCGCTCCTACCTGGTCACGCACCAGCGCACGC...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCGCCCTTGGCCCTTTCTaGGGCTCCTGTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCALGPF*GSCPAG
Trigger: CCCTGCGGGACAGGAGCCTCAGAAAGGGCCAAGGGC...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCTGGAGGACCAGCTCCTaGCGGCAGCAGAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGWRTSS*RQQKTA
Trigger: GGCTGTCTTCTGCTGCCGGCAGGAGCTGGTCCTCCA...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCGTTCACTGCAGCCTCTaGCTCCCAGGCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGVHCSL*LPGSAS
Trigger: GGAGGCTGAGCCTGGGAGGCAGAGGCTGCAGTGAAC...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGGGGTCCCCACCCCTCTaGAGTCTGCGCCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWGSPPL*SLRRIR
Trigger: TCGGATTCGGCGCAGACTCCAGAGGGGTGGGGACCC...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CAA 72 bp TGGGTGGCCGGGCCCCTCCCTCGCCGCCACACCCGGTaGCAAACACACAAATCCCTTGCTCCCCAGACCACC +
Preference number: 4 (lower is better)
Translates to: WVAGPLPRRHTR*QTHKSLAPQTT
Trigger: GGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGCGAGGGAGGGGCCCGGCCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCTGCGCCGATGCCGCTTaGAGTCCGAGCTGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCCADAA*SPSCGR
Trigger: TCGGCCACAGCTCGGACTTCAAGCGGCATCGGCGCA...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp CGCGCTGCTCTTCTCCCCAGAGCTCCCCCACGTCTCCGGCTGAGCACACGGACCCTCAGTCGCTCTAAGTaGGCGCTGGGCTCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: RAALLPRAPPRLRLSTRTLSRSK*ALGSEN
Trigger: GTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAG...GGTCCGTGTGCTCAGCCGGAGACGTGGGGGAGCTCTGGGGAGAAGAGCAGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGGAAACAAGTTGGACCTaGGGCCGCGCAGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRETSWT*GRAEPP
Trigger: GGGAGGCTCTGCGCGGCCTCAGGTCCAACTTGTTTC...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGGCCACCGCCTCCACCTaGGCATCCTGCACTACCTCT +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWATAST*ASCTTS
Trigger: AGAGGTAGTGCAGGATGCGCAGGTGGAGGCGGTGGC...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGAGCCAGGACTTGGGGTaGACGGGGAAGTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRSQDLG*TGKWKP
Trigger: GGGCTTCCACTTCCCCGTGCACCCCAAGTCCTGGCT...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGACGCCAACTACCGCCCTaGTTCACAGCCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRRQLPP*FTARAH
Trigger: GTGGGCCCGGGCTGTGAAGCAGGGCGGTAGTTGGCG...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCAACGGGGCGTCTGCCTaGTCCCGGAGAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGNGASA*SRRGAA
Trigger: GGCTGCCCCTCTCCGGGAGCAGGCAGACGCCCCGTT...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCGAGCGAGCCTCCACGTaGCCTGGTCCTCAACACACA +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGERAST*PGPQHT
Trigger: TGTGTGTTGAGGACCAGGCCACGTGGAGGCTCGCTC...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCATCCCTAGGAGTGGCTaGAGCCCGGGAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCIPRSG*SPGGLQ
Trigger: CTGCAGGCCTCCCGGGCTCCAGCCACTCCTAGGGAT...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCCACCGCACCCAGGACTaGGACCCTCAGCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGHRTQD*DPQPPG
Trigger: CCCGGGAGGCTGAGGGTCCCAGTCCTGGGTGCGGTG...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp CGCGCTGCTCTTCTCCCCAGAGCTCCCCCACGTCTCCGGCTGAGCACACGGACCGGTCCTCAACACACATaGACCAGGCCAGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RAALLPRAPPRLRLSTRTGPQHT*TRPAGN
Trigger: GTTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACC...GGTCCGTGTGCTCAGCCGGAGACGTGGGGGAGCTCTGGGGAGAAGAGCAGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GCCACACCCGGTTGCAAACACACAAATCCCTTGCTCCCCAGACCACCCAAGTCGAGTGCGCGCGACGGCTaGACCCCGCACCGCACACGC +
Preference number: 4 (lower is better)
Translates to: ATPGCKHTNPLLPRPPKSSARDG*TPHRTR
Trigger: GCGTGTGCGGTGCGGGGTTCAGCCGTCGCGCGCACT...CGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGAGGTGCGGGAAGACCTTaGCGCACACGTCGCACGTGG +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRGAGRP*RTRRTW
Trigger: CCACGTGCGACGTGTGCGGCAAGGTCTTCCCGCACC...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGGATGACCAGAGAAGGTaGAGGACCAGCTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRDDQRR*RTSSCR
Trigger: CCGGCAGGAGCTGGTCCTCCACCTTCTCTGGTCATC...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCTGGAGCTCCGCCCTTTaGAAACCTACAAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGWSSAL*KPTRPP
Trigger: GGGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCA...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCGGGGCCACACTGGCCTaGGGCCAACTCCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGGATLA*GQLLMG
Trigger: GCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCC...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCCTCAAGGAATCCATCTaGGCTCAAGGGATCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSLKESI*AQGIRL
Trigger: AAGGCGGATCCCTTGAGCTCAGATGGATTCCTTGAG...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGAGTATGTGTGCGCTGGTaGGTGACCAGCACCGAGCGC +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRVCVRW*VTSTER
Trigger: GCGCTCGGTGCTGGTCACGCACCAGCGCACACATAC...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCGCCGCCACACCCGGTTaGAAACACACAAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGAATPG*KHTNPL
Trigger: CAAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGC...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGCGCACACGTCGCACGTaGTCTCCGGCCTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KILRPTSVALSERWAPRTRTRRT*SPASRP
Trigger: CGGCCGGGAGGCCGGAGACCACGTGCGACGTGTGCG...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGAACTTCAGATCCCTCTaGCCCAGGGTCCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWNFRSL*PRVRVL
Trigger: GAGGACACGGACCCTGGGCCAGAGGGATCTGAAGTT...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGACCCGCCCCCAGCCCTaGCAGCCTGGCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KILRPTSVALSERWAPRTTRPQP*QPGCCA
Trigger: AGCGCAGCAGCCAGGCTGCCAGGGCTGGGGGCGGGT...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGAGGAATACGGTGGGCATaGGCAGCACGGGGCCACACT +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRGIRWA*AARGHT
Trigger: AGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCC...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCAGGCATTTTGGGTCCTaGGGCTGTACACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIRHFGS*GCTPCP
Trigger: AGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCT...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGTCAAGGGATCCGCCTTaGCCTCCCATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWSRDPP*PPIVLG
Trigger: TCCCAGCACTATGGGAGGCCAAGGCGGATCCCTTGA...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CAA 72 bp GCTGCGAGGGCCTCGGGCGCCCGTAGATGTCTGAGTTaGCCACCTCCGGCTGAGGGAGACGAAAGTACCAAG +
Preference number: 4 (lower is better)
Translates to: AARASGARRCLS*PPPAEGDESTK
Trigger: CTTGGTACTTTCGTCTCCCTCAGCCGGAGGTGGCAAACTCAGACATCTACGGGCGCCCGAGGCCCTCGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGTGCAGGCCCTTTTCCTaGAGAACTGGGGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: YRPASQPGPTQGISQSPWCRPFS*RTGDLA
Trigger: TGCCAAGTCCCCAGTTCTTCAGGAAAAGGGCCTGCA...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGCTGTGTAGACGCCAGTaGCGATGTCTCCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRLCRRQ*RCLLPQ
Trigger: CTGAGGAAGGAGACATCGTCACTGGCGTCTACACAG...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCGCGCCCGTAGATGTCTaGGTTTGCCACCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGAPVDV*VCHLRL
Trigger: CAGCCGGAGGTGGCAAACTCAGACATCTACGGGCGC...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCCACACCCGGTTGCAAACACACAAATCCCTTGCTCCCCAGACCACCCAAGTCGAACCGGTGCGGAGGGTaGCGGGGTGACCTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: ATPGCKHTNPLLPRPPKSNRCGG*RGDLGA
Trigger: TGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTT...CGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCCGGTGCGTCTTCATGTaGGTGAGCAAGTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCRCVFM*VSKCEL
Trigger: GAGCTCGCACTTGCTCACCCACATGAAGACGCACCG...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCACCTCGGTGCAAGTGTaGGTAGAGAAGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCTSVQV*VEKRRR
Trigger: CCGCCTCCTCTTCTCTACCCACACTTGCACCGAGGT...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGAACACTACATCAAGTGTaGGGCAGCGTGGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRTLHQV*GSVGAT
Trigger: GGTGGCCCCCACGCTGCCCCACACTTGATGTAGTGT...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGAGCCTCCAGAGTAGCTaGGACTATAGACGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRSLQSS*DYRRAP
Trigger: TGGCGCACGTCTATAGTCCCAGCTACTCTGGAGGCT...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGAGGCTCCTTCTGCAGATaGGGGAAAGCCCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRGSFCR*GKARIR
Trigger: CCTTATCCGGGCTTTCCCTCATCTGCAGAAGGAGCC...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTCGCAGCCGAAGGGCTTaGCGGCCGCGTGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSIRSRRA*RPRGSA
Trigger: AGCGCTACCACGCGGCCGTCAAGCCCTTCGGCTGCG...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TGTCAACACCCGCGACCCGTCTGCCTGGCCGTAAGTTTGGTATCTGGCTTTTTCCAGTCTCCGTGGGGGTaGCGTCCTGGCCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CQHPRPVCLAVSLVSGFFQSPWG*RPGLAA
Trigger: GGCAGCGAGGCCAGGACGTCACCCCCACGGAGACTG...GAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCCACACCCGGTTGCAAACACACAAATCCCTTGCTCCCCAGACCACCCAAGTCGAGCCACTGTGCAAGCTaGCAGGCCACGGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ATPGCKHTNPLLPRPPKSSHCAS*QATGAS
Trigger: GGAGGCACCCGTGGCCTGGCAGCTTGCACAGTGGCT...CGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGCCTCCCTGGGACCCCTaGTCTCCTCACCACCCCGCC +
Preference number: 4 (lower is better)
Translates to: FKGGILGPGAVHLALVLEPPWDP*SPHHPA
Trigger: GGCGGGGTGGTGAGGAGAGCAGGGGTCCCAGGGAGG...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TGCCCGCCCAGTGGCTTCCATGGGCCCAGTCCAGAGGGTAGGATGCCCACCAGGATCGGGCTTGGGAATTaGGTATCCCAAGGACACGAG +
Preference number: 4 (lower is better)
Translates to: CPPSGFHGPSPEGRMPTRIGLGN*VSQGHE
Trigger: CTCGTGTCCTTGGGATACCCAATTCCCAAGCCCGAT...CCTGGTGGGCATCCTACCCTCTGGACTGGGCCCATGGAAGCCACTGGGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCTTCAAGTTTTCCCACTaGAGCTCCGCCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSFKFSH*SSALWK
Trigger: TTTCCAAAGGGCGGAGCTCCAGTGGGAAAACTTGAA...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCAAGTGTGGGGCAGCGTaGGGGCCACCAAGGAATACG +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGKCGAA*GPPRNT
Trigger: CGTATTCCTTGGTGGCCCCCACGCTGCCCCACACTT...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGAGGCTGGGGATGTGTTTaGACCACCACGAAGGGTACC +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRGWGCV*TTTKGT
Trigger: GGTACCCTTCGTGGTGGTCCAAACACATCCCCAGCC...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGAGGAGTAGGTGAGCCCTaGATGAGCCACATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRGVGEP*MSHMVL
Trigger: CAGCACCATGTGGCTCATCCAGGGCTCACCTACTCC...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCTTGGCCTTGAATTTCTaGTCTCAGGCGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GMGSTGPHWPGANSSWAILALNF*SQAILP
Trigger: TGGGAGGATCGCCTGAGACCAGAAATTCAAGGCCAA...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGATGGTACTGGAGTAGGTaGGCCCTGGATGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRWYWSR*ALDEPH
Trigger: ATGTGGCTCATCCAGGGCTCACCTACTCCAGTACCA...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCAGGTCTATTAGGGAATaGAGCTGCACCAAAAATCCG +
Preference number: 4 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSRSIRE*SCTKNP
Trigger: CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCT...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGCGGCTAAGTCGCTCCTaGGTCCCCAACGCCGGACAC +
Preference number: 4 (lower is better)
Translates to: KILRPTSVALSERWAPRTRLSRS*VPNAGH
Trigger: GTGTCCGGCGTTGGGGACCCAGGAGCGACTTAGCCG...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGCAGCTGCCCGCCCAGTaGCTTCCATGGGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: FKGGILGPGAVHLALVLEQLPAQ*LPWAQS
Trigger: GGACTGGGCCCATGGAAGCCACTGGGCGGGCAGCTG...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCCTGGCCTCGAACTCCTaGGCTCAAGGAATCCATCTG +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGLASNS*AQGIHL
Trigger: CAGATGGATTCCTTGAGCTCAGGAGTTCGAGGCCAG...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCCACACCCGGTTGCAAACACACAAATCCCTTGCTCCCCAGACCACCCAAGTCGTGGTGGATGGCCAAGTaGGAGCGGTACACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ATPGCKHTNPLLPRPPKSWWMAK*ERYTKP
Trigger: GGGCTTCGTGTACCGCTCGCACTTGGCCATCCACCA...CGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGGTGTGCACCGCCTGGTaGCGTGCCAGCGCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQVCTAW*RASAEL
Trigger: GAGCTCGGCGCTGGCACGGCACCAGGCGGTGCACAC...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTGCGGTGGCTCCGCGGTaGGTCTTCATGTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSIAVAPR*VFMWVS
Trigger: GCTCACCCACATGAAGACGCACCGCGGAGCCACCGC...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCAGCCTCCACGTGGCCTaGTCCTCAACACACATGAAC +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGSLHVA*SSTHMN
Trigger: GTTCATGTGTGTTGAGGACCAGGCCACGTGGAGGCT...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TGTCAACACCCGCGACCCGTCTGCCTGGCCGTAAGTTTGGTATCTGGCTTTTTCCTCCAGCTGGGCAGCTaGGGAGTCGGGAGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: CQHPRPVCLAVSLVSGFFLQLGS*GVGSRV
Trigger: CACACGACTCCCGACTCCCCAGCTGCCCAGCTGGAG...GAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCAGGAATGGGAAGAAGTaGTCAGCCAAACCCACCGGC +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGRNGKK*SAKPTG
Trigger: GCCGGTGGGTTTGGCTGACCACTTCTTCCCATTCCT...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGATTAAGGGAGGCATTTTaGGTCCTGGGGCTGTACACC +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRLREAF*VLGLYT
Trigger: GGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAA...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
3UTR CAA 72 bp GACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCCCTTaGGAAACCTACAAGGCCTCCCCTCGCCGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: DKFQVFPLELRP*ETYKASPRRAQ
Trigger: CTGCGCGCGGCGAGGGGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCAGTGGGAAAACTTGAAACTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCAGCGCCGAGCTCTGGCTaGAGCTGCGGCCGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPAPSSG*SCGRSA
Trigger: CGCACTGCGGCCGCAGCTTCAGCCAGAGCTCGGCGC...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGCGGAGGGTGCCGGGGTaGCCTCGGTGCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVRRVPG*PRCKCG
Trigger: CCCACACTTGCACCGAGGTCACCCCGGCACCCTCCG...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGGAGGCCCCGCTGGTCTaGTTCCAGCCTTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: FKGGILGPGAVHLALVLEEAPLV*FQPFPL
Trigger: GAGTGGGAAAGGCTGGAAGCAGACCAGCGGGGCCTC...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGTCAACACCCGCGACCCGTCTGCCTGGCCGTAAGTTTGGTATCTGGCTTTTTCTGTAGACGAAGCGCTTaGCGCAGTCCGGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: CQHPRPVCLAVSLVSGFFCRRSA*RSPGTG
Trigger: TCCCGTGCCCGGACTGCGGCAAGCGCTTCGTCTACA...GAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGACGTGCGCCGCCAAGTaGGAGCCGCGGGCGAACCGC +
Preference number: 4 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPTCAAK*EPRANR
Trigger: GCGGTTCGCCCGCGGCTCGCACTTGGCGGCGCACGT...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp CGCGCTGCTCTTCTCCCCAGAGCTCCCCCACGTCTCCGGCTGAGCACACGGACCTCACCCAGGCTGGAGTaGAATGGAAAAATCATAGTT +
Preference number: 4 (lower is better)
Translates to: RAALLPRAPPRLRLSTRTSPRLE*NGKIIV
Trigger: AACTATGATTTTTCCATTGCACTCCAGCCTGGGTGA...GGTCCGTGTGCTCAGCCGGAGACGTGGGGGAGCTCTGGGGAGAAGAGCAGCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGCACAAAGCGGGCTCCTaGGGCGACGGGCCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPHKAGS*GDGPSA
Trigger: GGCGCTCGGCCCGTCGCCCCAGGAGCCCGCTTTGTG...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGGGTGCAGCCAGGACTTaGGGTGCACGGGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FKGGILGPGAVHLALVLEGAART*GARGSG
Trigger: TCCACTTCCCCGTGCACCCCAAGTCCTGGCTGCACC...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTGCTCTAAGTGAGCGCTaGGCTCCGAGAACGGGGCGT +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSIALSER*APRTGR
Trigger: ACGCCCCGTTCTCGGAGCCCAGCGCTCACTTAGAGC...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGACCACGAAGGGTACCTaGCCCCTCACTCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KILRPTSVALSERWAPRTTTKGT*PLTLAS
Trigger: AGAGGCCAGAGTGAGGGGCCAGGTACCCTTCGTGGT...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCACCCAGCCAGGCTAACTaGCCGCCACCACCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPPSQAN*PPPPRP
Trigger: GGGCCTGGGTGGTGGCGGTCAGTTAGCCTGGCTGGG...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCCACACCCGGTTGCAAACACACAAATCCCTTGCTCCCCAGACCACCCAAGTCGGTATGGATGCGTCGGTaGGTAACCAGGTGCGACTTG +
Preference number: 4 (lower is better)
Translates to: ATPGCKHTNPLLPRPPKSVWMRR*VTRCDL
Trigger: CAAGTCGCACCTGGTTACGCACCGACGCATCCATAC...CGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTCGTACACGAAGCTCTTaGCGCAGTCGGCGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSIRTRSS*RSRRSD
Trigger: ATCGCTGCGCCGACTGCGGCAAGAGCTTCGTGTACG...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGAGGGGCCGGTGGCCCTaGAGGCTGCGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPRGRWP*RLRCCR
Trigger: CCGACAGCAGCGCAGCCTGCAGGGCCACCGGCCCCT...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGACGTCCTGGCCTCGCTaGCTCCGCGCTGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQTSWPR*LRAALL
Trigger: GAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGT...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGTCAACACCCGCGACCCGTCTGCCTGGCCGTAAGTTTGGTATCTGGCTTTTTCCACCCGCGACCCGTCTaGCTGGCCGTAAGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: CQHPRPVCLAVSLVSGFFHPRPV*LAVSLV
Trigger: TACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTG...GAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGCGAGAACGGGGCGTCTaGCTGCTCCCGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPRERGV*LLPERG
Trigger: GCCCCTCTCCGGGAGCAGGCAGACGCCCCGTTCTCG...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGTCAACACCCGCGACCCGTCTGCCTGGCCGTAAGTTTGGTATCTGGCTTTTTCGAACTACACCCCAGCTaGCCGCCCAGTGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: CQHPRPVCLAVSLVSGFFELHPS*PPSGFH
Trigger: ATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTC...GAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp CGCGCTGCTCTTCTCCCCAGAGCTCCCCCACGTCTCCGGCTGAGCACACGGACCGTCTTTGTATTTGTCTaGCACTCAAACGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RAALLPRAPPRLRLSTRTVFVFV*HSNVCF
Trigger: GAAACAGACGTTTGAGTGGCAGACAAATACAAAGAC...GGTCCGTGTGCTCAGCCGGAGACGTGGGGGAGCTCTGGGGAGAAGAGCAGCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGAGGTCGGGGACTATCTaGGACCCAAGGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KILRPTSVALSERWAPRTRSGTI*DPRFFP
Trigger: GGGGAAGAACCTTGGGTCCCAGATAGTCCCCGACCT...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGGTGTGCGTGCGCTGGTaGATGGCCAAGTGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQVCVRW*MAKCER
Trigger: CCGCTCGCACTTGGCCATCCACCAGCGCACGCACAC...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGGGGTGCACGGGGAAGTaGAAGCCCAGCGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVGCTGK*KPSGWE
Trigger: CTCCCACCCGCTGGGCTTCCACTTCCCCGTGCACCC...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGCCGGCGAACGCGGCCTaGTGCTCGGAGCCGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVPANAA*CSEPKL
Trigger: AAGCTTCGGCTCCGAGCACCAGGCCGCGTTCGCCGG...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGATCTCTCACTGAGGAATaGGAAGAAGTGGTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRSLTEE*EEVVSQ
Trigger: TTGGCTGACCACTTCTTCCCATTCCTCAGTGAGAGA...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTACGGGTTCCCAGGAGTaGCGACAGCATGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSITGSQE*RQHGVQ
Trigger: CTGGACTCCATGCTGTCGCCACTCCTGGGAACCCGT...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGGGGGCCAACTCCTCATaGGCCATCCTAGGACCCATT +
Preference number: 4 (lower is better)
Translates to: KILRPTSVALSERWAPRTGANSS*AILGPI
Trigger: AATGGGTCCTAGGATGGCCCATGAGGAGTTGGCCCC...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGCACCCCTCTGGAGTCTaGGCCGAATCCGAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQHPSGV*AESESS
Trigger: CGACGACTCGGATTCGGCGCAGACTCCAGAGGGGTG...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGGGCGCCCAAACGTCTTaGCGCAGTCCGAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQGAQTS*RSPSRS
Trigger: GGATCTGCTCGGACTGCGGCAAGACGTTTGGGCGCC...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGGTGTGCGTGCGCCGATaGCGCTTGAAGTCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQVCVRR*RLKSEL
Trigger: CAGCTCGGACTTCAAGCGGCATCGGCGCACGCACAC...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTACCAGGCAGGGGCCTTaGATAGTTGGGTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSITRQGP*IVGCLV
Trigger: AACCAGGCACCCAACTATGCAAGGCCCCTGCCTGGT...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGACCCACCAACTACCGTaGCTCCTACCCGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVTHQLP*LLPAPS
Trigger: GCTGGGGGCGGGTAGGAGGCACGGTAGTTGGTGGGT...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCGCCGCCATCCTCCCTaGGAGCGAGCCTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPRRHPP*ERASTW
Trigger: CCACGTGGAGGCTCGCTCCCAGGGAGGATGGCGGCG...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGAGTGTCCTAGGGCCCTaGTTATGGGATGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KILRPTSVALSERWAPRTSVLGP*LWDVGK
Trigger: TTTCCCCACATCCCATAATCAGGGCCCTAGGACACT...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCACGGAGCCGAAGCTTGTaGCGCCCGCGAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPRSRSL*RPRTPA
Trigger: TGCTGGAGTTCGCGGGCGGCACAAGCTTCGGCTCCG...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCAGGTGGACAGCCACTGTaGAAGCTGCCAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPGGQPL*KLPGHG
Trigger: CCCGTGGCCTGGCAGCTTGCACAGTGGCTGTCCACC...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp CGCGCTGCTCTTCTCCCCAGAGCTCCCCCACGTCTCCGGCTGAGCACACGGACCAACCAATTTGTGAAATaGGACTCTAAACAGAAACAC +
Preference number: 4 (lower is better)
Translates to: RAALLPRAPPRLRLSTRTNQFVK*DSKQKH
Trigger: GTGTTTCTGTTTAGAGTCCCATTTCACAAATTGGTT...GGTCCGTGTGCTCAGCCGGAGACGTGGGGGAGCTCTGGGGAGAAGAGCAGCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCTGCAGGACAGCTGCTaGGGCCCAGGAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPLQDSC*GPGGTE
Trigger: CTCCGTCCCTCCTGGGCCCCAGCAGCTGTCCTGCAG...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GCCACACCCGGTTGCAAACACACAAATCCCTTGCTCCCCAGACCACCCAAGTCGCTCCAAAGACGACACTaGGTTCTTTCTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ATPGCKHTNPLLPRPPKSLQRRH*VLSPKK
Trigger: CTTCTTGGGAGAAAGAACTCAGTGTCGTCTTTGGAG...CGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGGCCCAAGTCTCTCACTaGGGAATGGGAAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FKGGILGPGAVHLALVLEAQVSH*GMGRSG
Trigger: ACCACTTCTTCCCATTCCTCAGTGAGAGACTTGGGC...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp AAACCGAACCGGTGCGGAGGGTGCCGGGGTGACCTCGGTGCAAGTGTGGGTAGACCACTAACCAATTTGTaGAATGGGACTCTAAACAGA +
Preference number: 4 (lower is better)
Translates to: KPNRCGGCRGDLGASVGRPLTNL*NGTLNR
Trigger: TCTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGG...TCTACCCACACTTGCACCGAGGTCACCCCGGCACCCTCCGCACCGGTTCGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGGAATGGGGCTTCACATaGACTACACCCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQEWGFT*TTPQLP
Trigger: GGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCATTC...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCTTGGACGAGATTAAGTaGAAAGATCAGGATAAAAGG +
Preference number: 4 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCLDEIK*KDQDKR
Trigger: CCTTTTATCCTGATCTTTTCACTTAATCTCGTCCAA...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGGCTGCGAAAAGCGCTTaGCGCACTCAGGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPAAKSA*RTQGTG
Trigger: TCCCGTGCCCTGAGTGCGGCAAGCGCTTTTCGCAGC...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGGAGTCGGGAGTCGTGTaGAGCGCCGCCATCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPESGVV*SAAILP
Trigger: AGGGAGGATGGCGGCGCTCCACACGACTCCCGACTC...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGAGCACGGGGCCACACTaGCCTGGGGCCAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPSTGPH*PGANSS
Trigger: TGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCT...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGTTTGCCACCTCCGGCTaGGGGAGACGAAAGTACCAA +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQFATSG*GRRKYQ
Trigger: TTGGTACTTTCGTCTCCCTCAGCCGGAGGTGGCAAA...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGATCCTGCACTACCTCTaGCACACCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVILHYL*HTLLLL
Trigger: GAGGAGGAGGAGGGTGTGGCAGAGGTAGTGCAGGAT...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGTACCCAGCACCCCAATaGCTCCCTGGGACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPYPAPQ*LPGTPA
Trigger: AGCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTA...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCATGTCTACACTAACGTaGAGGGAACTAGGTCTATTA +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGMSTLT*RELGLL
Trigger: TAATAGACCTAGTTCCCTCCACGTTAGTGTAGACAT...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCACCAAGGAATACGGTaGGCATGGGCAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPHQGIR*AWAARG
Trigger: GCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTG...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCTTTTCCTATGACCATTaGATGGGGGAGGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: MGLHMNYTPAARPVASMGFSYDH*MGEGIF
Trigger: AAAAATACCCTCCCCCATCCAATGGTCATAGGAAAA...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGAGATGGAGGGGAAAGTaGCGCTCAGGGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPRWRGK*RSGLRD
Trigger: GTCCCTCAGCCCTGAGCGTCACTTTCCCCTCCATCT...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGCGGACACTCCTCCTCTaGCAGCACCTCCTTCACATC +
Preference number: 4 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPRTLLL*QHLLHI
Trigger: GATGTGAAGGAGGTGCTGGCAGAGGAGGAGTGTCCG...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGAGTGTGGCCGCGCACGTaGGCCGCCAAGTGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRVWPRT*AAKCEP
Trigger: CGGCTCGCACTTGGCGGCGCACGTGCGCGGCCACAC...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGCCTATGACCATTGGATaGGGGAGGGTATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FKGGILGPGAVHLALVLEPMTIG*GRVFFS
Trigger: GGAGAAAAATACCCTCCCCCATCCAATGGTCATAGG...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTGAAAAGGAAGGAGGTTaGGGAAACCGGCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSIEKEGG*GNRQKR
Trigger: TCTCTTTTGCCGGTTTCCCCAACCTCCTTCCTTTTC...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GCGCTCAGCCCCCAAGGCCATGTCTACACTAACGTGGAGGGAACTAGGTCTATTAAGTGCCACCTTTCGTaGCTCACATTTCACAAGTCA +
Preference number: 4 (lower is better)
Translates to: ALSPQGHVYTNVEGTRSIKCHLS*LTFHKS
Trigger: TGACTTGTGAAATGTGAGTCACGAAAGGTGGCACTT...AATAGACCTAGTTCCCTCCACGTTAGTGTAGACATGGCCTTGGGGGCTGAGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGAACACACAAATCCCTTaGTCCCCAGACCACCCAAGT +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQNTQIP*SPDHPS
Trigger: ACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTT...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCATGGGGCTGTACACCTTaGCCTGGTACTGGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPWGCTP*PGTGVG
Trigger: ACCTACTCCAGTACCAGGGCAAGGTGTACAGCCCCA...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGTCCTCCTCTTCTTCCTaGTCAGGGTCGCACTCTGAC +
Preference number: 4 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPSSSSS*SGSHSD
Trigger: GTCAGAGTGCGACCCTGACCAGGAAGAAGAGGAGGA...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGTGCCTCCACTAACCAATTTGTGAAATGGGACTCTAAACAGCTTTTCCTGAAGAACTaGGGACTTGGCATCACCACC +
Preference number: 4 (lower is better)
Translates to: CQATGASTNQFVKWDSKQLFLKN*GLGITT
Trigger: GGTGGTGATGCCAAGTCCCCAGTTCTTCAGGAAAAG...CTGTTTAGAGTCCCATTTCACAAATTGGTTAGTGGAGGCACCCGTGGCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCATCAGCACAGACAGGATaGAGGCACTTGCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPSAQTG*RHLQGT
Trigger: TGTGCCTTGCAAGTGCCTGCATCCTGTCTGTGCTGA...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGAGAGTTAAAGGGACCTaGGAGTGTCCTAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPRVKGT*ECPRAL
Trigger: CAGGGCCCTAGGACACTCGCAGGTCCCTTTAACTCT...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGTCGTCTTCCTCCTCGTaGTCCTCTATGTCGTCCGTC +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPSSSSS*SSMSSV
Trigger: GACGGACGACATAGAGGACCACGAGGAGGAAGACGA...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGACGCCGACCAGAGCCCTaGGGGCTCGTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRRRPEP*GLVLLL
Trigger: GAGGAGGAGAACGAGCCCCCAGGGCTCTGGTCGGCG...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGGGAGTGGCGACAGCATaGAGTCCAGTCAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPGVATA*SPVRSS
Trigger: TGAACTTCTGACTGGACTCCATGCTGTCGCCACTCC...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGATCGCTGCCTCCGCGCTaGTCTTCTCCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRSLPPR*SSPQSS
Trigger: GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGA...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGACCAAAACCGAACCGGTaGGGAGGGTGCCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRPKPNR*GGCRGD
Trigger: GTCACCCCGGCACCCTCCGCACCGGTTCGGTTTTGG...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCAAGATCAGATCGGGCTTaGGAATTGGGTATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPRSDRA*ELGIPR
Trigger: CCTTGGGATACCCAATTCCCAAGCCCGATCTGATCT...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGCCTGATTATGGGATGTaGGGAAAGATCCTTCGACCA +
Preference number: 4 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVPDYGM*GKILRP
Trigger: TGGTCGAAGGATCTTTCCCCACATCCCATAATCAGG...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGCAAAAATCCGTTTCCTaGCCCCATTCACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPQKSVS*PHSQWP
Trigger: GGGCCACTGTGAATGGGGCCAGGAAACGGATTTTTG...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGGAAAGTACCAAGGACTaGGAGGACAAGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPESTKD*EDKQRP
Trigger: TGGTCTCTGCTTGTCCTCTCAGTCCTTGGTACTTTC...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGCCTCCAGATCACATTTaGTTACAGCAGTTCTTATTT +
Preference number: 4 (lower is better)
Translates to: FKGGILGPGAVHLALVLEPPDHI*LQQFLF
Trigger: AAATAAGAACTGCTGTAATCAAATGTGATCTGGAGG...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR TCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGATGCCTGGTTTGTCACTaGGCCACGGCTCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRCLVCH*ATAQVH
Trigger: GTGGACCTGAGCCGTGGCTCAGTGACAAACCAGGCA...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGACCGTGTTGTCCCAGCTaGCCTCGAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRPCCPS*PRTPEL
Trigger: GAGCTCAGGAGTTCGAGGCCAGCTGGGACAACACGG...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGAATGTGGGTGAGCAAGTaGGAGCTCTGCGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRMWVSK*ELCEKR
Trigger: CCGCTTCTCGCAGAGCTCGCACTTGCTCACCCACAT...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGAAAGAAGCATTAGATTaGTCTGTTCTGATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVKEALD*SVLMPP
Trigger: TGGAGGCATCAGAACAGAGCAATCTAATGCTTCTTT...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR GCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGATTAGGGAATGCAGCTaGACCAAAAATCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPIRECS*TKNPFP
Trigger: AGGAAACGGATTTTTGGTGCAGCTGCATTCCCTAAT...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CCA 90 bp GTGGAAATAAATATCCGCAGACGACAAGTTTCAAGTTTTCCCACTGGAGCTCCGGATAGAAGGAAATGTTaGACGAGATTAAGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VEINIRRRQVSSFPTGAPDRRKC*TRLSEK
Trigger: CTTTTCACTTAATCTCGTCCAACATTTCCTTCTATC...CGGAGCTCCAGTGGGAAAACTTGAAACTTGTCGTCTGCGGATATTTATTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 90 bp GCTCGGAGCCGAAGCTTGTGCCGCCCGCGAACTCCAGCAGGGCGCTaGCGCGCTCACCGGGGCCGGCACTGGACGGCCCCTTGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: ARSRSLCRPRTPAGR*RAHRGRHWTAPWRP
Trigger: CGGCCGCCAAGGGGCCGTCCAGTGCCGGCCCCGGTGAGCGCGGCAGCGCCCTGCTGGAGTTCGCGGGCGGCACAAGCTTCGGCTCCGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 90 bp CCGAGGGCCCGGCGAACGCGGCCTGGTGCTCGGAGCCGAAGCTTGTaGCGCCCGCGAACTCCAGCAGGGCGCTGCCGCGCTCACCGGGGC +
Preference number: 5 (lower is better)
Translates to: PRARRTRPGARSRSL*RPRTPAGRCRAHRG
Trigger: GCCCCGGTGAGCGCGGCAGCGCCCTGCTGGAGTTCGCGGGCGGCACAAGCTTCGGCTCCGAGCACCAGGCCGCGTTCGCCGGGCCCTCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 90 bp CTCGGGCTTGGGCGCGGGGGCTGGGGCCGAACCCGAGCCCGGCGCTaGGGTGGCTCCGCGGTGCGTCTTCATGTGGGTGAGCAAGTGCGA +
Preference number: 5 (lower is better)
Translates to: LGLGRGGWGRTRARR*GGSAVRLHVGEQVR
Trigger: TCGCACTTGCTCACCCACATGAAGACGCACCGCGGAGCCACCGCAGCGCCGGGCTCGGGTTCGGCCCCAGCCCCCGCGCCCAAGCCCGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 90 bp GGTAGCGCTGGTGCTTGGCCAGCGCGGCCCGGCGCCCAAACGTCTTaGCGCAGTCCGAGCAGATCCACGGGCTCTCCTCCTCCGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GSAGAWPARPGAQTS*RSPSRSTGSPPPPA
Trigger: CGCTGGCGGAGGAGGAGAGCCCGTGGATCTGCTCGGACTGCGGCAAGACGTTTGGGCGCCGGGCCGCGCTGGCCAAGCACCAGCGCTACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 90 bp GGGGCTGGGGCCGAACCCGAGCCCGGCGCTGCGGTGGCTCCGCGGTaGGTCTTCATGTGGGTGAGCAAGTGCGAGCTCTGCGAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: GAGAEPEPGAAVAPR*VFMWVSKCELCEKR
Trigger: CCGCTTCTCGCAGAGCTCGCACTTGCTCACCCACATGAAGACGCACCGCGGAGCCACCGCAGCGCCGGGCTCGGGTTCGGCCCCAGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 90 bp TCCTCTGCCCGCTCCAGCTGGGCAGCTGGGGAGTCGGGAGTCGTGTaGAGCGCCGCCATCCTCCCTGGGAGCGAGCCTCCACGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: SSARSSWAAGESGVV*SAAILPGSEPPRGL
Trigger: CAGGCCACGTGGAGGCTCGCTCCCAGGGAGGATGGCGGCGCTCCACACGACTCCCGACTCCCCAGCTGCCCAGCTGGAGCGGGCAGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 90 bp TCCTGGTCAGGGTCGCACTCTGACCCGTCCTCTGCCCGCTCCAGCTaGGCAGCTGGGGAGTCGGGAGTCGTGTGGAGCGCCGCCATCCTC +
Preference number: 5 (lower is better)
Translates to: SWSGSHSDPSSARSS*AAGESGVVWSAAIL
Trigger: GAGGATGGCGGCGCTCCACACGACTCCCGACTCCCCAGCTGCCCAGCTGGAGCGGGCAGAGGACGGGTCAGAGTGCGACCCTGACCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp GGGGGTGACGTCCTGGCCTCGCTGCCTCCGCGCTGCTCTTCTCCCCAGAGCTCCCGGCGCCCAAACGTCTaGCCGCAGTCCGAGCAGATC +
Preference number: 5 (lower is better)
Translates to: GGDVLASLPPRCSSPQSSRRPNV*PQSEQI
Trigger: GATCTGCTCGGACTGCGGCAAGACGTTTGGGCGCCG...GGAGCTCTGGGGAGAAGAGCAGCGCGGAGGCAGCGAGGCCAGGACGTCACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCAAGCCCACCTTGCCCTaGGCCCTTTCTGAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIKPTLP*ALSEAP
Trigger: AGGAGCCTCAGAAAGGGCCAAGGGCAAGGTGGGCTT...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCGGGCTGGGGATGTGTTaGGACCACCACGAAGGGTAC +
Preference number: 5 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGGLGMC*DHHEGY
Trigger: GTACCCTTCGTGGTGGTCCAAACACATCCCCAGCCC...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 90 bp CTCCACCTCGGCCACCGCCTCCACCTGCGCATCCTGCACTACCTCTaGCACACCCTCCTCCTCCTCCTCCACCACTATCTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LHLGHRLHLRILHYL*HTLLLLLHHYLLLL
Trigger: GAGGAGGAGGAGATAGTGGTGGAGGAGGAGGAGGAGGGTGTGGCAGAGGTAGTGCAGGATGCGCAGGTGGAGGCGGTGGCCGAGGTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCCCAAGGTTCTTCCCCTaGTTCCAGCCGGAAGATCAG +
Preference number: 5 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIPRFFP*FQPEDQ
Trigger: CTGATCTTCCGGCTGGAACAAGGGGAAGAACCTTGG...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp GGCATGGGCAGCACGGGGCCACACTGGCCTGGGGCCAACTCCTCATGGGCCATCGTTTGCAGAAACAAGTaGGACCTGAGGCCGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GMGSTGPHWPGANSSWAIVCRNK*DLRPRR
Trigger: TCTGCGCGGCCTCAGGTCCAACTTGTTTCTGCAAAC...GATGGCCCATGAGGAGTTGGCCCCAGGCCAGTGTGGCCCCGTGCTGCCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp AACCCAGGGCCGAGGTCATTACCCAGCACCCCAATGCCTCCCTGGGACCCCTGCCTGGGGCTGTACACCTaGCCCTGGTACTGGAGTAGG +
Preference number: 5 (lower is better)
Translates to: NPGPRSLPSTPMPPWDPCLGLYT*PWYWSR
Trigger: CCTACTCCAGTACCAGGGCAAGGTGTACAGCCCCAG...GCAGGGGTCCCAGGGAGGCATTGGGGTGCTGGGTAATGACCTCGGCCCTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 90 bp TCCTGCACCTCTTCCCCCTTTTCCTCCTCCTCCTCCTCTTCTTCCTaGTCAGGGTCGCACTCTGACCCGTCCTCTGCCCGCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCTSSPFSSSSSSSS*SGSHSDPSSARSSW
Trigger: CCAGCTGGAGCGGGCAGAGGACGGGTCAGAGTGCGACCCTGACCAGGAAGAAGAGGAGGAGGAGGAGGAAAAGGGGGAAGAGGTGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 90 bp CTCCTCCTCTTCCTCCTCCTCCAGGTCCTCATCCCTAGGAGTGGCTaGAGCCCGGGAGGCCTGCAGGCCCTTTTCCTGAAGAACTGGGGA +
Preference number: 5 (lower is better)
Translates to: LLLFLLLQVLIPRSG*SPGGLQALFLKNWG
Trigger: TCCCCAGTTCTTCAGGAAAAGGGCCTGCAGGCCTCCCGGGCTCCAGCCACTCCTAGGGATGAGGACCTGGAGGAGGAGGAAGAGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382252.6
ENST00000427912.2
CDS-3UTR CAA 90 bp CGCGCTGCTCTTCTCCCCAGAGCTCCCCCACGTCTCCGGCTGAGCACACGGACCAAACACACAAATCCCTaGCTCCCCAGACCACCCAAG +
Preference number: 5 (lower is better)
Translates to: RAALLPRAPPRLRLSTRTKHTNP*LPRPPK
Trigger: CTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTT...GGTCCGTGTGCTCAGCCGGAGACGTGGGGGAGCTCTGGGGAGAAGAGCAGCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGCGGTGCGGGAAGACCTaGCCGCACACGTCGCACGTG +
Preference number: 5 (lower is better)
Translates to: FKGGILGPGAVHLALVLERCGKT*PHTSHV
Trigger: CACGTGCGACGTGTGCGGCAAGGTCTTCCCGCACCG...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGGTGCGCCGATGCCGCTaGAAGTCCGAGCTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: FKGGILGPGAVHLALVLEVRRCR*KSELWP
Trigger: CGGCCACAGCTCGGACTTCAAGCGGCATCGGCGCAC...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp TGTCAACACCCGCGACCCGTCTGCCTGGCCGTAAGTTTGGTATCTGGCTTTTTCGCTCGGAGCCGAAGCTaGTGCCGCCCGCGAACTCCA +
Preference number: 5 (lower is better)
Translates to: CQHPRPVCLAVSLVSGFFARSRS*CRPRTP
Trigger: TGGAGTTCGCGGGCGGCACAAGCTTCGGCTCCGAGC...GAAAAAGCCAGATACCAAACTTACGGCCAGGCAGACGGGTCGCGGGTGTTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp ATGGGGCTTCACATGAACTACACCCCAGCTGCCCGCCCAGTGGCTTCCATGGGCCGTAGATGTCTGAGTTaGCCACCTCCGGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: MGLHMNYTPAARPVASMGRRCLS*PPPAEG
Trigger: TCCCTCAGCCGGAGGTGGCAAACTCAGACATCTACG...GCCCATGGAAGCCACTGGGCGGGCAGCTGGGGTGTAGTTCATGTGAAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 90 bp AACCAGGCCAGCAGGGAACGCCAAGAGGTCTCAGCACAGACAGGATaGAGGCACTTGCAAGGCACAACGGGGCTAGGAGGAGAGACAGGT +
Preference number: 5 (lower is better)
Translates to: NQASRERQEVSAQTG*RHLQGTTGLGGETG
Trigger: ACCTGTCTCTCCTCCTAGCCCCGTTGTGCCTTGCAAGTGCCTGCATCCTGTCTGTGCTGAGACCTCTTGGCGTTCCCTGCTGGCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382252.6
ENST00000614588.1
CDS-3UTR CAA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCAGCACTGGACGGCCCCTaGGCGGCCGCCTCGGGCTTG +
Preference number: 5 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPALDGP*AAASGL
Trigger: CAAGCCCGAGGCGGCCGCCAAGGGGCCGTCCAGTGC...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp CGTGGGGGCCACCAAGGAATACGGTGGGCATGGGCAGCACGGGGCCACACTGGCAAAAGAAGCATTAGATaGCTCTGTTCTGATGCCTCC +
Preference number: 5 (lower is better)
Translates to: RGGHQGIRWAWAARGHTGKRSIR*LCSDAS
Trigger: GGAGGCATCAGAACAGAGCAATCTAATGCTTCTTTT...GCCAGTGTGGCCCCGTGCTGCCCATGCCCACCGTATTCCTTGGTGGCCCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGACAGGATGCAGGCACTaGCAAGGCACAACGGGGCTA +
Preference number: 5 (lower is better)
Translates to: KILRPTSVALSERWAPRTTGCRH*QGTTGL
Trigger: TAGCCCCGTTGTGCCTTGCAAGTGCCTGCATCCTGT...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGCGCCGCCACACCCGGTaGCAAACACACAAATCCCTT +
Preference number: 5 (lower is better)
Translates to: KILRPTSVALSERWAPRTRRHTR*QTHKSL
Trigger: AAGGGATTTGTGTGTTTGCAACCGGGTGTGGCGGCG...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 90 bp CCTCCTCTGCCAGCACCTGATACACAGGACAAAGAGACGCTTACCTaGTCCTCAACACACATGAACCAGGCCAGCAGGGAACGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: PPLPAPDTQDKETLT*SSTHMNQASRERQE
Trigger: CTCTTGGCGTTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACCAGGTAAGCGTCTCTTTGTCCTGTGTATCAGGTGCTGGCAGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427912.2
CDS-3UTR CAA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGCGCTGCGAAAAGCGCTaGCCGCACTCAGGGCACGGG +
Preference number: 5 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPRCEKR*PHSGHG
Trigger: CCCGTGCCCTGAGTGCGGCAAGCGCTTTTCGCAGCG...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp TACCGCCCTGCTTCACAGCCCGGGCCCACCCAGGGGATATCGCAGTCTCCGTGGGCCTCCAGATCACATTaGATTACAGCAGTTCTTATT +
Preference number: 5 (lower is better)
Translates to: YRPASQPGPTQGISQSPWASRSH*ITAVLI
Trigger: AATAAGAACTGCTGTAATCAAATGTGATCTGGAGGC...CCACGGAGACTGCGATATCCCCTGGGTGGGCCCGGGCTGTGAAGCAGGGCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS TCA 90 bp CTGATACACAGGACAAAGAGACGCTTACCTGGTCCTCAACACACATaGACCAGGCCAGCAGGGAACGCCAAGAGGTCTCAGCACAGACAG +
Preference number: 5 (lower is better)
Translates to: LIHRTKRRLPGPQHT*TRPAGNAKRSQHRQ
Trigger: CTGTCTGTGCTGAGACCTCTTGGCGTTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACCAGGTAAGCGTCTCTTTGTCCTGTGTATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427912.2
ENST00000614588.1
CDS TCA 90 bp ACAGCCCGAGGGTGGCCCATGTTTAGCCAGAAGGAAAAGCCCACCTaGTACACAGGACAAAGAGACGCTTACCTGGTCCTCAACACACAT +
Preference number: 5 (lower is better)
Translates to: TARGWPMFSQKEKPT*YTGQRDAYLVLNTH
Trigger: ATGTGTGTTGAGGACCAGGTAAGCGTCTCTTTGTCCTGTGTATCAGGTGGGCTTTTCCTTCTGGCTAAACATGGGCCACCCTCGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614588.1
CDS CCA 90 bp AGAAGGAAAAGCCCACCTGATACACAGGACAAAGAGACGCTTACCTaGTCCTCAACACACATGAACCAGGCCAGCAGGGAACGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RRKSPPDTQDKETLT*SSTHMNQASRERQE
Trigger: CTCTTGGCGTTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACCAGGTAAGCGTCTCTTTGTCCTGTGTATCAGGTGGGCTTTTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614588.1
CDS-3UTR CAA 90 bp TTTAAGGGAGGCATTTTGGGTCCTGGGGCTGTACACCTTGCCCTGGTACTGGAGAAGATCAGATCGGGCTaGGGAATTGGGTATCCCAAG +
Preference number: 5 (lower is better)
Translates to: FKGGILGPGAVHLALVLEKIRSG*GIGYPK
Trigger: CTTGGGATACCCAATTCCCAAGCCCGATCTGATCTT...CTCCAGTACCAGGGCAAGGTGTACAGCCCCAGGACCCAAAATGCCTCCCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCACTGGAGCTCCGCCCTTaGGAAACCTACAAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPLELRP*ETYKAS
Trigger: GGAGGCCTTGTAGGTTTCCAAAGGGCGGAGCTCCAG...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp GCCACACCCGGTTGCAAACACACAAATCCCTTGCTCCCCAGACCACCCAAGTCGGGGTTTAATTCCTCCTaGGCAATAAAGGGTGTCTAC +
Preference number: 5 (lower is better)
Translates to: ATPGCKHTNPLLPRPPKSGFNSS*AIKGVY
Trigger: GTAGACACCCTTTATTGCCAAGGAGGAATTAAACCC...CGACTTGGGTGGTCTGGGGAGCAAGGGATTTGTGTGTTTGCAACCGGGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp GCCTCTGGAAGCCTGGCCAACATATTCACAAAAAGTAATGCCCCAAGTCAGGTGGATCGGGCTTGGGAATaGGGTATCCCAAGGACACGA +
Preference number: 5 (lower is better)
Translates to: ASGSLANIFTKSNAPSQVDRAWE*GIPRTR
Trigger: TCGTGTCCTTGGGATACCCAATTCCCAAGCCCGATC...CACCTGACTTGGGGCATTACTTTTTGTGAATATGTTGGCCAGGCTTCCAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp AAGATCCTTCGACCAACCTCAGTCGCTCTAAGTGAGCGCTGGGCTCCGAGAACGACTAGGTCTTTGTATTaGTCTGCCACTCAAACGTCT +
Preference number: 5 (lower is better)
Translates to: KILRPTSVALSERWAPRTTRSLY*SATQTS
Trigger: AGACGTTTGAGTGGCAGACAAATACAAAGACCTAGT...CGTTCTCGGAGCCCAGCGCTCACTTAGAGCGACTGAGGTTGGTCGAAGGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 90 bp CCTGGGATGCCAGTCTCAGCTCCTTTTCACCAAGAACTACGTGCCTaGTGTGAACTGCTGCTCTTTCCTGGAGTAAATCAGGCATTTATC +
Preference number: 5 (lower is better)
Translates to: PGMPVSAPFHQELRA*CELLLFPGVNQAFI
Trigger: GATAAATGCCTGATTTACTCCAGGAAAGAGCAGCAGTTCACACCAGGCACGTAGTTCTTGGTGAAAAGGAGCTGAGACTGGCATCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614588.1
CDS-3UTR CAA 90 bp TTTTCAGACCCACAAAGAAAGGACAGGAGAGTCAGATCTGATCGTGGGCTACCATGCCTGGCCGTAAGTTaGGTATCTGGCTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: FSDPQRKDRRVRSDRGLPCLAVS*VSGFFS
Trigger: GGAGAAAAAGCCAGATACCAAACTTACGGCCAGGCA...TGGTAGCCCACGATCAGATCTGACTCTCCTGTCCTTTCTTTGTGGGTCTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp ACTAACGTGGAGGGAACTAGGTCTATTAGGGAATGCAGCTGCACCAAAAATCCGTGGAGTCTTGATACGTaGCCCAGGTTGGCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: TNVEGTRSIRECSCTKNPWSLDT*PRLALN
Trigger: ATTCAAGGCCAACCTGGGCAACGTATCAAGACTCCA...CGGATTTTTGGTGCAGCTGCATTCCCTAATAGACCTAGTTCCCTCCACGTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGACACCAGGCAGGGGCCTaGCATAGTTGGGTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRHQAGA*HSWVPG
Trigger: ACCAGGCACCCAACTATGCAAGGCCCCTGCCTGGTG...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGACTCAAGGGATCCGCCTaGGCCTCCCATAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRLKGSA*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCAAGGCGGATCCCTTGAG...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS-3UTR CAA 90 bp ACATTTGATTACAGCAGTTCTTATTTTTCAGACCCACAAAGAAAGGACAGGAGATTCAGACATGGAGTCTaGATACGTTGCCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: TFDYSSSYFSDPQRKDRRFRHGV*IRCPGW
Trigger: CCAACCTGGGCAACGTATCAAGACTCCATGTCTGAA...TCTCCTGTCCTTTCTTTGTGGGTCTGAAAAATAAGAACTGCTGTAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CAA 90 bp CGCCCGAGGGCCCGGCGAACGCGGCCTGGTGCTCGGAGCCGAAGCTaGTGCCGCCCGCGAACTCCAGCAGGGCGCTGCCGCGCTCACCGG +
Preference number: 6 (lower is better)
Translates to: RPRARRTRPGARSRS*CRPRTPAGRCRAHR
Trigger: CCGGTGAGCGCGGCAGCGCCCTGCTGGAGTTCGCGGGCGGCACAAGCTTCGGCTCCGAGCACCAGGCCGCGTTCGCCGGGCCCTCGGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 72 bp GGGCGCGGGGGCTGGGGCCGAACCCGAGCCCGGCGCTaGGGTGGCTCCGCGGTGCGTCTTCATGTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: GRGGWGRTRARR*GGSAVRLHVGE
Trigger: CTCACCCACATGAAGACGCACCGCGGAGCCACCGCAGCGCCGGGCTCGGGTTCGGCCCCAGCCCCCGCGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS TCA 72 bp GCGCGCGCCCGTGCGCCGTCAAGTGCGCGCGACGGCTaGACCCCGCACCGCACACGCCGCACACGAACGGCT +
Preference number: 6 (lower is better)
Translates to: ARARAPSSARDG*TPHRTRRTRTA
Trigger: AGCCGTTCGTGTGCGGCGTGTGCGGTGCGGGGTTCAGCCGTCGCGCGCACTTGACGGCGCACGGGCGCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 72 bp CGAAGCTTGTGCCGCCCGCGAACTCCAGCAGGGCGCTaGCGCGCTCACCGGGGCCGGCACTGGACGGCCCCT +
Preference number: 6 (lower is better)
Translates to: RSLCRPRTPAGR*RAHRGRHWTAP
Trigger: AGGGGCCGTCCAGTGCCGGCCCCGGTGAGCGCGGCAGCGCCCTGCTGGAGTTCGCGGGCGGCACAAGCTTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CAA 72 bp GCCCGGCGAACGCGGCCTGGTGCTCGGAGCCGAAGCTaGTGCCGCCCGCGAACTCCAGCAGGGCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: ARRTRPGARSRS*CRPRTPAGRCR
Trigger: GCGGCAGCGCCCTGCTGGAGTTCGCGGGCGGCACAAGCTTCGGCTCCGAGCACCAGGCCGCGTTCGCCGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 72 bp CGGCGAACGCGGCCTGGTGCTCGGAGCCGAAGCTTGTaGCGCCCGCGAACTCCAGCAGGGCGCTGCCGCGCT +
Preference number: 6 (lower is better)
Translates to: RRTRPGARSRSL*RPRTPAGRCRA
Trigger: AGCGCGGCAGCGCCCTGCTGGAGTTCGCGGGCGGCACAAGCTTCGGCTCCGAGCACCAGGCCGCGTTCGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 72 bp CGCCTCTCCGTCCGCCTCGCCAACTTCAGATCCCTCTaGCCCAGGGTCCGTGTCCTCGGGCCCCGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RLSVRLANFRSL*PRVRVLGPRGG
Trigger: GCCGCCGCGGGGCCCGAGGACACGGACCCTGGGCCAGAGGGATCTGAAGTTGGCGAGGCGGACGGAGAGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 72 bp GGTGCTTGGCCAGCCGCGAGCGGTGCGGGAAGACCTTaGCGCACACGTCGCACGTGGTCTCCGGCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GAWPAASGAGRP*RTRRTWSPASR
Trigger: CCGGGAGGCCGGAGACCACGTGCGACGTGTGCGGCAAGGTCTTCCCGCACCGCTCGCGGCTGGCCAAGCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 72 bp CGCTCCAGCTGGGCAGCTGGGGAGTCGGGAGTCGTGTaGAGCGCCGCCATCCTCCCTGGGAGCGAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: RSSWAAGESGVV*SAAILPGSEPP
Trigger: TGGAGGCTCGCTCCCAGGGAGGATGGCGGCGCTCCACACGACTCCCGACTCCCCAGCTGCCCAGCTGGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CAA 72 bp TGGTGCTTGGCCAGCCGCGAGCGGTGCGGGAAGACCTaGCCGCACACGTCGCACGTGGTCTCCGGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: WCLASRERCGKT*PHTSHVVSGLP
Trigger: CGGGAGGCCGGAGACCACGTGCGACGTGTGCGGCAAGGTCTTCCCGCACCGCTCGCGGCTGGCCAAGCACCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 72 bp GGTGCTTGGCCAGCGCGGCCCGGCGCCCAAACGTCTTaGCGCAGTCCGAGCAGATCCACGGGCTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: GAWPARPGAQTS*RSPSRSTGSPP
Trigger: AGGAGGAGAGCCCGTGGATCTGCTCGGACTGCGGCAAGACGTTTGGGCGCCGGGCCGCGCTGGCCAAGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS GCA 72 bp GCCGAACCCGAGCCCGGCGCTGCGGTGGCTCCGCGGTaGGTCTTCATGTGGGTGAGCAAGTGCGAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: AEPEPGAAVAPR*VFMWVSKCELC
Trigger: GCAGAGCTCGCACTTGCTCACCCACATGAAGACGCACCGCGGAGCCACCGCAGCGCCGGGCTCGGGTTCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CAA 72 bp TGGTGCTTGGCCAGCGCGGCCCGGCGCCCAAACGTCTaGCCGCAGTCCGAGCAGATCCACGGGCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WCLASAARRPNV*PQSEQIHGLSS
Trigger: GGAGGAGAGCCCGTGGATCTGCTCGGACTGCGGCAAGACGTTTGGGCGCCGGGCCGCGCTGGCCAAGCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 72 bp GGAGTCGGGAGTCGTGTGGAGCGCCGCCATCCTCCCTaGGAGCGAGCCTCCACGTGGCCTGGTCCTCAACAC +
Preference number: 6 (lower is better)
Translates to: GVGSRVERRHPP*ERASTWPGPQH
Trigger: GTGTTGAGGACCAGGCCACGTGGAGGCTCGCTCCCAGGGAGGATGGCGGCGCTCCACACGACTCCCGACTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 72 bp CCAGGATCGGGAAGCTGTCCGGGTGCAGCCAGGACTTaGGGTGCACGGGGAAGTGGAAGCCCAGCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: PGSGSCPGAART*GARGSGSPAGG
Trigger: CCCACCCGCTGGGCTTCCACTTCCCCGTGCACCCCAAGTCCTGGCTGCACCCGGACAGCTTCCCGATCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 72 bp GGGGACTTGGCATCACCACCACGGCTAAGTCGCTCCTaGGTCCCCAACGCCGGACACTCCTCCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: GDLASPPRLSRS*VPNAGHSSSAS
Trigger: GCTGGCAGAGGAGGAGTGTCCGGCGTTGGGGACCCAGGAGCGACTTAGCCGTGGTGGTGATGCCAAGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382252.6
ENST00000427912.2
CDS TCA 72 bp GAGCGAGCCTCCACGTGGCCTGGTCCTCAACACACATaGACCAGGCCAGCAGGGAACGCCAAGAGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: ERASTWPGPQHT*TRPAGNAKRSQ
Trigger: CTGAGACCTCTTGGCGTTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACCAGGCCACGTGGAGGCTCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382252.6
CDS CCA 72 bp AGCCCGGGAGGCCTGCAGGCCCTTTTCCTGAAGAACTaGGGACTTGGCATCACCACCACGGCTAAGTCGCTC +
Preference number: 6 (lower is better)
Translates to: SPGGLQALFLKN*GLGITTTAKSL
Trigger: GAGCGACTTAGCCGTGGTGGTGATGCCAAGTCCCCAGTTCTTCAGGAAAAGGGCCTGCAGGCCTCCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382252.6
ENST00000427912.2
CDS CAA 90 bp AGCAGGGAACGCCAAGAGGTCTCAGCACAGACAGGATGCAGGCACTaGCAAGGCACAACGGGGCTAGGAGGAGAGACAGGTGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SRERQEVSAQTGCRH*QGTTGLGGETGARK
Trigger: CTTCCTGGCACCTGTCTCTCCTCCTAGCCCCGTTGTGCCTTGCAAGTGCCTGCATCCTGTCTGTGCTGAGACCTCTTGGCGTTCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382252.6
ENST00000614588.1
CDS TCA 72 bp GTCCCCAACGCCGGACACTCCTCCTCTGCCAGCACCTaGTACACAGGACAAAGAGACGCTTACCTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: VPNAGHSSSAST*YTGQRDAYLVL
Trigger: GAGGACCAGGTAAGCGTCTCTTTGTCCTGTGTATCAGGTGCTGGCAGAGGAGGAGTGTCCGGCGTTGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427912.2
CDS GCA 72 bp AGCAGGGAACGCCAAGAGGTCTCAGCACAGACAGGATaGAGGCACTTGCAAGGCACAACGGGGCTAGGAGGA +
Preference number: 6 (lower is better)
Translates to: SRERQEVSAQTG*RHLQGTTGLGG
Trigger: TCCTCCTAGCCCCGTTGTGCCTTGCAAGTGCCTGCATCCTGTCTGTGCTGAGACCTCTTGGCGTTCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382252.6
ENST00000614588.1
CDS CAA 72 bp CGCCAAGAGGTCTCAGCACAGACAGGATGCAGGCACTaGCAAGGCACAACGGGGCTAGGAGGAGAGACAGGT +
Preference number: 6 (lower is better)
Translates to: RQEVSAQTGCRH*QGTTGLGGETG
Trigger: ACCTGTCTCTCCTCCTAGCCCCGTTGTGCCTTGCAAGTGCCTGCATCCTGTCTGTGCTGAGACCTCTTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382252.6
ENST00000614588.1
CDS TCA 72 bp AGGACAAAGAGACGCTTACCTGGTCCTCAACACACATaGACCAGGCCAGCAGGGAACGCCAAGAGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: RTKRRLPGPQHT*TRPAGNAKRSQ
Trigger: CTGAGACCTCTTGGCGTTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACCAGGTAAGCGTCTCTTTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427912.2
ENST00000614588.1
CDS CCA 72 bp CCAGCACCTGATACACAGGACAAAGAGACGCTTACCTaGTCCTCAACACACATGAACCAGGCCAGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: PAPDTQDKETLT*SSTHMNQASRE
Trigger: TTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACCAGGTAAGCGTCTCTTTGTCCTGTGTATCAGGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427912.2
CDS CCA 72 bp AGCCCACCTGATACACAGGACAAAGAGACGCTTACCTaGTCCTCAACACACATGAACCAGGCCAGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: SPPDTQDKETLT*SSTHMNQASRE
Trigger: TTCCCTGCTGGCCTGGTTCATGTGTGTTGAGGACCAGGTAAGCGTCTCTTTGTCCTGTGTATCAGGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614588.1
CDS CCA 72 bp CCAGTCTCAGCTCCTTTTCACCAAGAACTACGTGCCTaGTGTGAACTGCTGCTCTTTCCTGGAGTAAATCAG +
Preference number: 6 (lower is better)
Translates to: PVSAPFHQELRA*CELLLFPGVNQ
Trigger: CTGATTTACTCCAGGAAAGAGCAGCAGTTCACACCAGGCACGTAGTTCTTGGTGAAAAGGAGCTGAGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614588.1
CDS TCA 72 bp CTCAGCTCCTTTTCACCAAGAACTACGTGCCTGGTGTaGACTGCTGCTCTTTCCTGGAGTAAATCAGGCATT +
Preference number: 6 (lower is better)
Translates to: LSSFSPRTTCLV*TAALSWSKSGI
Trigger: AATGCCTGATTTACTCCAGGAAAGAGCAGCAGTTCACACCAGGCACGTAGTTCTTGGTGAAAAGGAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614588.1