RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF311 (Homo sapiens)

Ensembl gene IDs: ENSG00000169260, ENSG00000197935, ENSG00000233831, ENSG00000235178

Ensembl transcript IDs: ENST00000377179.4, ENST00000383655.4, ENST00000426120.2, ENST00000429714.2, ENST00000436574.2, ENST00000452316.2, ENST00000458265.2, ENST00000466714.1, ENST00000474196.1, ENST00000481554.1, ENST00000483450.1, ENST00000484052.1, ENST00000487312.1, ENST00000490260.1

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAGACGGTTCCTGGTCTTaGAGGCCTTCCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGDGSWS*RPSHSP
Trigger: GGGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTC...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGGGAGCTGGGTATCCTaGCGGGTCCAAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRGSWVS*RVQSSW
Trigger: CCAGCTGCTTTGGACCCGCCAGGATACCCAGCTCCC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGACGGTTCCTGGTCTTaGAGGCCTTCCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRDGSWS*RPSHSP
Trigger: GGGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACCTGACGGAAGGACGTaGCACACTCACTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGPDGRT*HTHCRC
Trigger: ACACCTGCAGTGAGTGTGGCACGTCCTTCCGTCAGG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACGGGTCCAAAGCAGCTaGCTTGGTGGTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGRVQSS*LGGPEL
Trigger: GAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGGGAGCTGGGTATCCTaGCGGGTCCAAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLGSWVS*RVQSSW
Trigger: CCAGCTGCTTTGGACCCGCCAGGATACCCAGCTCCC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGGACTCCCTGTCCTGTaGATCCTGCACACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRGLPVL*ILHTGV
Trigger: GACCCCTGTGTGCAGGATCCACAGGACAGGGAGTCC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACCAAAGGGCCCTTCTTaGCCCACAGTGCCGCTACTG +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIPKGPS*PTVPLL
Trigger: CAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGLAWWS*TLIQQH
Trigger: GTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGGTCTGAGCTCCGACTaGAGGCCCTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLGLSSD*RPFHTC
Trigger: GCAAGTGTGGAAGGGCCTTCAGTCGGAGCTCAGACC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAATCAGAGCTGAGCCCTaGCGGAAGGACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIIRAEP*RKDVPH
Trigger: GTGTGGCACGTCCTTCCGTCAGGGCTCAGCTCTGAT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATGTCCAATCAGAGCTaGGCCCTGACGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGMSNQS*ALTEGR
Trigger: ACGTCCTTCCGTCAGGGCTCAGCTCTGATTGGACAT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCGGGTCCAAAGCAGCTaGCTTGGTGGTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRRVQSS*LGGPEL
Trigger: GAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGGGAGCTGGGTATCCTaGCGGGTCCAAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTGSWVS*RVQSSW
Trigger: CCAGCTGCTTTGGACCCGCCAGGATACCCAGCTCCC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAGGACTCCCTGTCCTGTaGATCCTGCACACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIGLPVL*ILHTGV
Trigger: GACCCCTGTGTGCAGGATCCACAGGACAGGGAGTCC...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLAWWS*TLIQQH
Trigger: GTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAATAGAGCGCTTTCCTaGGGGAGCTGGGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRNRALS*GSWVSW
Trigger: CCAGGATACCCAGCTCCCTCAGGAAAGCGCTCTATT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGACGGTTCCTGGTCTTaGAGGCCTTCCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTDGSWS*RPSHSP
Trigger: GGGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGGTCTGAGCTCCGACTaGAGGCCCTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTGLSSD*RPFHTC
Trigger: GCAAGTGTGGAAGGGCCTTCAGTCGGAGCTCAGACC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCATCAGAGCTGAGCCCTaGCGGAAGGACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTIRAEP*RKDVPH
Trigger: GTGTGGCACGTCCTTCCGTCAGGGCTCAGCTCTGAT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGATGTCCAATCAGAGCTaGGCCCTGACGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRMSNQS*ALTEGR
Trigger: ACGTCCTTCCGTCAGGGCTCAGCTCTGATTGGACAT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACTGTCCTGTGGATCCTaGACACAGGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGLSCGS*TQGSTS
Trigger: AGAAGTAGACCCCTGTGTGCAGGATCCACAGGACAG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACCCTTCCACACTTGCTaGACTCATAAGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGPFHTC*THKVVP
Trigger: GGGAACGACCTTATGAGTGCAGCAAGTGTGGAAGGG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACCTGACGGAAGGACGTaGCACACTCACTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLPDGRT*HTHCRC
Trigger: ACACCTGCAGTGAGTGTGGCACGTCCTTCCGTCAGG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACGGGTCCAAAGCAGCTaGCTTGGTGGTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIRVQSS*LGGPEL
Trigger: GAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACGGGTCCAAAGCAGCTaGCTTGGTGGTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLRVQSS*LGGPEL
Trigger: GAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAGGGAGCTGGGTATCCTaGCGGGTCCAAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIGSWVS*RVQSSW
Trigger: CCAGCTGCTTTGGACCCGCCAGGATACCCAGCTCCC...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGGGAGCTGGGTATCCTaGCGGGTCCAAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRGSWVS*RVQSSW
Trigger: CCAGCTGCTTTGGACCCGCCAGGATACCCAGCTCCC...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGGACTCCCTGTCCTGTaGATCCTGCACACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTGLPVL*ILHTGV
Trigger: GACCCCTGTGTGCAGGATCCACAGGACAGGGAGTCC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACCAAAGGGCCCTTCTTaGCCCACAGTGCCGCTACTG +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRPKGPS*PTVPLL
Trigger: CAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSLAWWS*TLIQQH
Trigger: GTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCAATAGAGCGCTTTCCTaGGGGAGCTGGGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSNRALS*GSWVSW
Trigger: CCAGGATACCCAGCTCCCTCAGGAAAGCGCTCTATT...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCCTGGCTCATTAGTGTaGTATCTGCTTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRPGSLV*YLLAAG
Trigger: ACCTGCCGCAAGCAGATATCACACTAATGAGCCAGG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATCCTCAAATGTCACTaGCTCTTGGGCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGILKCH*LLGLAH
Trigger: ATGAGCCAGGCCCAAGAGTCAGTGACATTTGAGGAT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCCACATCTTGTCAGCTaGCACTGGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSPHLVS*HWVGAA
Trigger: AGCTGCTCCTACCCAGTGTCAGCTGACAAGATGTGG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACCACATCTTGTCAGCTaGCACTGGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLPHLVS*HWVGAA
Trigger: AGCTGCTCCTACCCAGTGTCAGCTGACAAGATGTGG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAGACGGTTCCTGGTCTTaGAGGCCTTCCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRDGSWS*RPSHSP
Trigger: GGGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTC...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGGTCTGAGCTCCGACTaGAGGCCCTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRGLSSD*RPFHTC
Trigger: GCAAGTGTGGAAGGGCCTTCAGTCGGAGCTCAGACC...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGGTCTGAGCTCCGACTaGAGGCCCTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRGLSSD*RPFHTC
Trigger: GCAAGTGTGGAAGGGCCTTCAGTCGGAGCTCAGACC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACTGCGCTTACAGTTATaGCGAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGLRLQL*RKAFPH
Trigger: GTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAGTATGCTCTCGTTCATaGGCCCTGCGCTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGVCSRS*ALRLQL
Trigger: TAACTGTAAGCGCAGGGCTCATGAACGAGAGCATAC...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGTGCTGCCTCAGGACTaGACTATGATGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRVLPQD*TMMEGH
Trigger: ATGGCCTTCCATCATAGTTCAGTCCTGAGGCAGCAC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGATCAGAGCTGAGCCCTaGCGGAAGGACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRIRAEP*RKDVPH
Trigger: GTGTGGCACGTCCTTCCGTCAGGGCTCAGCTCTGAT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAATCAGAGCTGAGCCCTaGCGGAAGGACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRIRAEP*RKDVPH
Trigger: GTGTGGCACGTCCTTCCGTCAGGGCTCAGCTCTGAT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAATCAGAGCTGAGCCCTaGCGGAAGGACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIIRAEP*RKDVPH
Trigger: GTGTGGCACGTCCTTCCGTCAGGGCTCAGCTCTGAT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAATCAGAGCTGAGCCCTaGCGGAAGGACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRIRAEP*RKDVPH
Trigger: GTGTGGCACGTCCTTCCGTCAGGGCTCAGCTCTGAT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACTGACTACTGAGGTCTaGGAAACAGTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGLTTEV*ETVTGE
Trigger: CTCTCCAGTGACTGTTTCTCAGACCTCAGTAGTCAG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCACATGTTTTGGTGGTaGCAGCCAAAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRHMFWW*QPKGPS
Trigger: AGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCCTGACGGAAGGACGTaGCACACTCACTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTPDGRT*HTHCRC
Trigger: ACACCTGCAGTGAGTGTGGCACGTCCTTCCGTCAGG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGAACACATGTTTTGGTaGTGCCAGCCAAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGREHMFW*CQPKGP
Trigger: AGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGGAGAACACATGTTTTaGTGGTGCCAGCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRGEHMF*WCQPKG
Trigger: GCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAAAACAAGCTGTGAAGTaGCTCCAGTTGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGKQAVK*LQLMPA
Trigger: GGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCGGGTCCAAAGCAGCTaGCTTGGTGGTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTRVQSS*LGGPEL
Trigger: GAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGGACTCCCTGTCCTGTaGATCCTGCACACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRGLPVL*ILHTGV
Trigger: GACCCCTGTGTGCAGGATCCACAGGACAGGGAGTCC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAGGACTCCCTGTCCTGTaGATCCTGCACACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRGLPVL*ILHTGV
Trigger: GACCCCTGTGTGCAGGATCCACAGGACAGGGAGTCC...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAAGGGAATGCTTAAACTaGAAGGCCTTCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGRECLN*KAFPQQ
Trigger: CTGCTGTGGGAAGGCCTTCCAGTTTAAGCATTCCCT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTLAWWS*TLIQQH
Trigger: GTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACCTGGCTCATTAGTGTaGTATCTGCTTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLPGSLV*YLLAAG
Trigger: ACCTGCCGCAAGCAGATATCACACTAATGAGCCAGG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCCTGGCTCATTAGTGTaGTATCTGCTTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSPGSLV*YLLAAG
Trigger: ACCTGCCGCAAGCAGATATCACACTAATGAGCCAGG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGATCCTCAAATGTCACTaGCTCTTGGGCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRILKCH*LLGLAH
Trigger: ATGAGCCAGGCCCAAGAGTCAGTGACATTTGAGGAT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCCACATCTTGTCAGCTaGCACTGGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTPHLVS*HWVGAA
Trigger: AGCTGCTCCTACCCAGTGTCAGCTGACAAGATGTGG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGATCTGAGTGCCAACTaGAGTTTTTGCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRDLSAN*SFCHTW
Trigger: CCAGGTGTGGCAAAAACTTCAGTTGGCACTCAGATC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACCGGTGTGGATAAGCTaGTGCATACAGAGACGGTTC +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLPVWIS*CIQRRF
Trigger: GAACCGTCTCTGTATGCATCAGCTTATCCACACCGG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACCGGTGTGGATAAGCTaGTGCATACAGAGACGGTTC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIPVWIS*CIQRRF
Trigger: GAACCGTCTCTGTATGCATCAGCTTATCCACACCGG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCCGGTGTGGATAAGCTaGTGCATACAGAGACGGTTC +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSPVWIS*CIQRRF
Trigger: GAACCGTCTCTGTATGCATCAGCTTATCCACACCGG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGTGTTTGGTGAGGTCTaGACTCCCACTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSVFGEV*TPTEGL
Trigger: AAGGCCTTCAGTGGGAGTTCAGACCTCACCAAACAC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCTGCGCTTACAGTTATaGCGAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLRLQL*RKAFPH
Trigger: GTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGTATGCTCTCGTTCATaGGCCCTGCGCTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRVCSRS*ALRLQL
Trigger: TAACTGTAAGCGCAGGGCTCATGAACGAGAGCATAC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGTGCTGCCTCAGGACTaGACTATGATGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSVLPQD*TMMEGH
Trigger: ATGGCCTTCCATCATAGTTCAGTCCTGAGGCAGCAC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGTGCTGCCTCAGGACTaGACTATGATGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLVLPQD*TMMEGH
Trigger: ATGGCCTTCCATCATAGTTCAGTCCTGAGGCAGCAC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACACATGTTTTGGTGGTaGCAGCCAAAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLHMFWW*QPKGPS
Trigger: AGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTGTCCTGTGGATCCTaGACACAGGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSLSCGS*TQGSTS
Trigger: AGAAGTAGACCCCTGTGTGCAGGATCCACAGGACAG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACTGTCCTGTGGATCCTaGACACAGGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGILSCGS*TQGSTS
Trigger: AGAAGTAGACCCCTGTGTGCAGGATCCACAGGACAG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCCCTTCCACACTTGCTaGACTCATAAGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSPFHTC*THKVVP
Trigger: GGGAACGACCTTATGAGTGCAGCAAGTGTGGAAGGG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACCCTTCCACACTTGCTaGACTCATAAGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLPFHTC*THKVVP
Trigger: GGGAACGACCTTATGAGTGCAGCAAGTGTGGAAGGG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACCCTTCCACACTTGCTaGACTCATAAGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIPFHTC*THKVVP
Trigger: GGGAACGACCTTATGAGTGCAGCAAGTGTGGAAGGG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCCTGACGGAAGGACGTaGCACACTCACTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRPDGRT*HTHCRC
Trigger: ACACCTGCAGTGAGTGTGGCACGTCCTTCCGTCAGG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACCTGACGGAAGGACGTaGCACACTCACTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRPDGRT*HTHCRC
Trigger: ACACCTGCAGTGAGTGTGGCACGTCCTTCCGTCAGG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAGAACACATGTTTTGGTaGTGCCAGCCAAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIEHMFW*CQPKGP
Trigger: AGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTC...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGAACACATGTTTTGGTaGTGCCAGCCAAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSEHMFW*CQPKGP
Trigger: AGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGAACACATGTTTTGGTaGTGCCAGCCAAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLEHMFW*CQPKGP
Trigger: AGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGGAGAACACATGTTTTaGTGGTGCCAGCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSGEHMF*WCQPKG
Trigger: GCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGGAGAACACATGTTTTaGTGGTGCCAGCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLGEHMF*WCQPKG
Trigger: GCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCTTCCACTGCTGTCCTaGTTTCTTCCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLPLLS*FLPTGQ
Trigger: CTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCGGGTCCAAAGCAGCTaGCTTGGTGGTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRRVQSS*LGGPEL
Trigger: GAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATGCGGCAGGTTTCCTTaGCTTCCATCTTTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGCGRFP*LPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAAATGTCACTGACTCTTaGGCCTGGCTCATTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGNVTDS*AWLISV
Trigger: CACACTAATGAGCCAGGCCCAAGAGTCAGTGACATT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAGGGAATGCTTAAACTaGAAGGCCTTCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRRECLN*KAFPQQ
Trigger: CTGCTGTGGGAAGGCCTTCCAGTTTAAGCATTCCCT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAAACACTAAACCGCTGTaGTCTCACATCTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGNTKPL*SHILFP
Trigger: GGGAAACAAGATGTGAGATCACAGCGGTTTAGTGTT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLAWWS*TLIQQH
Trigger: GTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRLAWWS*TLIQQH
Trigger: GTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAATAGAGCGCTTTCCTaGGGGAGCTGGGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNINRALS*GSWVSW
Trigger: CCAGGATACCCAGCTCCCTCAGGAAAGCGCTCTATT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGAATAGAGCGCTTTCCTaGGGGAGCTGGGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRNRALS*GSWVSW
Trigger: CCAGGATACCCAGCTCCCTCAGGAAAGCGCTCTATT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAATCCTCAAATGTCACTaGCTCTTGGGCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLILKCH*LLGLAH
Trigger: ATGAGCCAGGCCCAAGAGTCAGTGACATTTGAGGAT...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCATCCTCAAATGTCACTaGCTCTTGGGCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSILKCH*LLGLAH
Trigger: ATGAGCCAGGCCCAAGAGTCAGTGACATTTGAGGAT...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACCACATCTTGTCAGCTaGCACTGGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIPHLVS*HWVGAA
Trigger: AGCTGCTCCTACCCAGTGTCAGCTGACAAGATGTGG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACCACATCTTGTCAGCTaGCACTGGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRPHLVS*HWVGAA
Trigger: AGCTGCTCCTACCCAGTGTCAGCTGACAAGATGTGG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGATCTGAGTGCCAACTaGAGTTTTTGCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLDLSAN*SFCHTW
Trigger: CCAGGTGTGGCAAAAACTTCAGTTGGCACTCAGATC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAGATCTGAGTGCCAACTaGAGTTTTTGCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIDLSAN*SFCHTW
Trigger: CCAGGTGTGGCAAAAACTTCAGTTGGCACTCAGATC...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATGTCGGCAAAGAGCTaGTCTACTGTTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGMSAKS*STVESL
Trigger: AAGGCTTTCAACAGTAGATCAGCTCTTTGCCGACAT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCCGGTGTGGATAAGCTaGTGCATACAGAGACGGTTC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTPVWIS*CIQRRF
Trigger: GAACCGTCTCTGTATGCATCAGCTTATCCACACCGG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGTGTTTGGTGAGGTCTaGACTCCCACTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTVFGEV*TPTEGL
Trigger: AAGGCCTTCAGTGGGAGTTCAGACCTCACCAAACAC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACTGCGCTTACAGTTATaGCGAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLLRLQL*RKAFPH
Trigger: GTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACTGCGCTTACAGTTATaGCGAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGILRLQL*RKAFPH
Trigger: GTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAGTATGCTCTCGTTCATaGGCCCTGCGCTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIVCSRS*ALRLQL
Trigger: TAACTGTAAGCGCAGGGCTCATGAACGAGAGCATAC...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCTCAGGACTGAACTATaGTGGAAGGCCATTCCACAT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLRTEL*WKAIPH
Trigger: ATGTGGAATGGCCTTCCATCATAGTTCAGTCCTGAG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGTGCTGCCTCAGGACTaGACTATGATGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTVLPQD*TMMEGH
Trigger: ATGGCCTTCCATCATAGTTCAGTCCTGAGGCAGCAC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAATGTCCAATCAGAGCTaGGCCCTGACGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRMSNQS*ALTEGR
Trigger: ACGTCCTTCCGTCAGGGCTCAGCTCTGATTGGACAT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAATGTCCAATCAGAGCTaGGCCCTGACGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRMSNQS*ALTEGR
Trigger: ACGTCCTTCCGTCAGGGCTCAGCTCTGATTGGACAT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGATGTCCAATCAGAGCTaGGCCCTGACGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRMSNQS*ALTEGR
Trigger: ACGTCCTTCCGTCAGGGCTCAGCTCTGATTGGACAT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTGACTACTGAGGTCTaGGAAACAGTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSLTTEV*ETVTGE
Trigger: CTCTCCAGTGACTGTTTCTCAGACCTCAGTAGTCAG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACTGACTACTGAGGTCTaGGAAACAGTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLLTTEV*ETVTGE
Trigger: CTCTCCAGTGACTGTTTCTCAGACCTCAGTAGTCAG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRSVISA*GRFPWL
Trigger: AAGCCAAGGAAACCTGCCGCAAGCAGATATCACACT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCTCGTTCATGAGCCCTaGGCTTACAGTTATGACGAA +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLVHEP*AYSYDE
Trigger: TTCGTCATAACTGTAAGCGCAGGGCTCATGAACGAG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAGTGTGGATTCTTTTGTaGTGCCTCAGGACTGAACTA +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGVWILL*CLRTEL
Trigger: TAGTTCAGTCCTGAGGCAGCACAAAAGAATCCACAC...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATGTCAAACACTGCCCTaGATTTGGGGTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGCQTLP*IWGSLA
Trigger: TGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGGAGAACACATGTTTTaGTGGTGCCAGCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTGEHMF*WCQPKG
Trigger: GCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAAAACAAGCTGTGAAGTaGCTCCAGTTGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIKQAVK*LQLMPA
Trigger: GGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTTCCACTGCTGTCCTaGTTTCTTCCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSLPLLS*FLPTGQ
Trigger: CTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACTTCCACTGCTGTCCTaGTTTCTTCCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLLPLLS*FLPTGQ
Trigger: CTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACTTCCACTGCTGTCCTaGTTTCTTCCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGILPLLS*FLPTGQ
Trigger: CTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTGCGGCAGGTTTCCTTaGCTTCCATCTTTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRCGRFP*LPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAACTGACTCTTGGGCCTaGCTCATTAGTGTGATATCT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGTDSWA*LISVIS
Trigger: AGATATCACACTAATGAGCCAGGCCCAAGAGTCAGT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAATGTCACTGACTCTTaGGCCTGGCTCATTAGTGTG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRNVTDS*AWLISV
Trigger: CACACTAATGAGCCAGGCCCAAGAGTCAGTGACATT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGGGAATGCTTAAACTaGAAGGCCTTCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLRECLN*KAFPQQ
Trigger: CTGCTGTGGGAAGGCCTTCCAGTTTAAGCATTCCCT...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACCTGGCTCATTAGTGTaGTATCTGCTTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRPGSLV*YLLAAG
Trigger: ACCTGCCGCAAGCAGATATCACACTAATGAGCCAGG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCCTGGCTCATTAGTGTaGTATCTGCTTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRPGSLV*YLLAAG
Trigger: ACCTGCCGCAAGCAGATATCACACTAATGAGCCAGG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACCTGGCTCATTAGTGTaGTATCTGCTTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIPGSLV*YLLAAG
Trigger: ACCTGCCGCAAGCAGATATCACACTAATGAGCCAGG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGATGTCGGCAAAGAGCTaGTCTACTGTTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRMSAKS*STVESL
Trigger: AAGGCTTTCAACAGTAGATCAGCTCTTTGCCGACAT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGTGTTTGGTGAGGTCTaGACTCCCACTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRVFGEV*TPTEGL
Trigger: AAGGCCTTCAGTGGGAGTTCAGACCTCACCAAACAC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAGTGTTTGGTGAGGTCTaGACTCCCACTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIVFGEV*TPTEGL
Trigger: AAGGCCTTCAGTGGGAGTTCAGACCTCACCAAACAC...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGTGTTTGGTGAGGTCTaGACTCCCACTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRVFGEV*TPTEGL
Trigger: AAGGCCTTCAGTGGGAGTTCAGACCTCACCAAACAC...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTCAGGACTGAACTATaGTGGAAGGCCATTCCACAT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSLRTEL*WKAIPH
Trigger: ATGTGGAATGGCCTTCCATCATAGTTCAGTCCTGAG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAGTGCTGCCTCAGGACTaGACTATGATGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRVLPQD*TMMEGH
Trigger: ATGGCCTTCCATCATAGTTCAGTCCTGAGGCAGCAC...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGTGCTGCCTCAGGACTaGACTATGATGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRVLPQD*TMMEGH
Trigger: ATGGCCTTCCATCATAGTTCAGTCCTGAGGCAGCAC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCTGACTACTGAGGTCTaGGAAACAGTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTLTTEV*ETVTGE
Trigger: CTCTCCAGTGACTGTTTCTCAGACCTCAGTAGTCAG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAATGGTAAGGCAGTGCTaGTCTTGGAAGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIMVRQC*SWKVFP
Trigger: TGGGAAAACCTTCCAAGATCAGCACTGCCTTACCAT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACACATGTTTTGGTGGTaGCAGCCAAAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRHMFWW*QPKGPS
Trigger: AGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCACATGTTTTGGTGGTaGCAGCCAAAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRHMFWW*QPKGPS
Trigger: AGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACACATGTTTTGGTGGTaGCAGCCAAAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRHMFWW*QPKGPS
Trigger: AGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLSVISA*GRFPWL
Trigger: AAGCCAAGGAAACCTGCCGCAAGCAGATATCACACT...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTGTCCTGTGGATCCTaGACACAGGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLSCGS*TQGSTS
Trigger: AGAAGTAGACCCCTGTGTGCAGGATCCACAGGACAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACTGTCCTGTGGATCCTaGACACAGGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNILSCGS*TQGSTS
Trigger: AGAAGTAGACCCCTGTGTGCAGGATCCACAGGACAG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACCCTTCCACACTTGCTaGACTCATAAGGTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRPFHTC*THKVVP
Trigger: GGGAACGACCTTATGAGTGCAGCAAGTGTGGAAGGG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACTCGTTCATGAGCCCTaGGCTTACAGTTATGACGAA +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLLVHEP*AYSYDE
Trigger: TTCGTCATAACTGTAAGCGCAGGGCTCATGAACGAG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGTGTGGATTCTTTTGTaGTGCCTCAGGACTGAACTA +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRVWILL*CLRTEL
Trigger: TAGTTCAGTCCTGAGGCAGCACAAAAGAATCCACAC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTGTCAAACACTGCCCTaGATTTGGGGTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRCQTLP*IWGSLA
Trigger: TGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGAACACATGTTTTGGTaGTGCCAGCCAAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIREHMFW*CQPKGP
Trigger: AGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTC...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGAACACATGTTTTGGTaGTGCCAGCCAAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRREHMFW*CQPKGP
Trigger: AGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAGGAGAACACATGTTTTaGTGGTGCCAGCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRGEHMF*WCQPKG
Trigger: GCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCC...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGATGCCAGCCTCCTTTaGAGAACACATGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLDASLL*RTHVLV
Trigger: CACCAAAACATGTGTTCTCCAAAGGAGGCTGGCATC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATGCGGCAGGTTTCCTTaGCTTCCATCTTTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLCGRFP*LPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATATGCGGCAGGTTTCCTTaGCTTCCATCTTTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGICGRFP*LPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCA...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCTGCGGCAGGTTTCCTTaGCTTCCATCTTTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSCGRFP*LPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCA...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGACTGACTCTTGGGCCTaGCTCATTAGTGTGATATCT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRTDSWA*LISVIS
Trigger: AGATATCACACTAATGAGCCAGGCCCAAGAGTCAGT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGGGAATGCTTAAACTaGAAGGCCTTCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTRECLN*KAFPQQ
Trigger: CTGCTGTGGGAAGGCCTTCCAGTTTAAGCATTCCCT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCGTTTCTCTTCAGTGTaGATCCTTCTGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRRFSSV*ILLCLV
Trigger: CACCAAACACAGAAGGATCCACACTGAAGAGAAACG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGCTGAGAAACAGTCACTaGAGAGAGGGATTTCCTACT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLRNSH*REGFPT
Trigger: AGTAGGAAATCCCTCTCTCCAGTGACTGTTTCTCAG...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAAACACTAAACCGCTGTaGTCTCACATCTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGINTKPL*SHILFP
Trigger: GGGAAACAAGATGTGAGATCACAGCGGTTTAGTGTT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAATCCTCAAATGTCACTaGCTCTTGGGCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRILKCH*LLGLAH
Trigger: ATGAGCCAGGCCCAAGAGTCAGTGACATTTGAGGAT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAATCCTCAAATGTCACTaGCTCTTGGGCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIILKCH*LLGLAH
Trigger: ATGAGCCAGGCCCAAGAGTCAGTGACATTTGAGGAT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGATCTGAGTGCCAACTaGAGTTTTTGCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRDLSAN*SFCHTW
Trigger: CCAGGTGTGGCAAAAACTTCAGTTGGCACTCAGATC...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGATCTGAGTGCCAACTaGAGTTTTTGCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRDLSAN*SFCHTW
Trigger: CCAGGTGTGGCAAAAACTTCAGTTGGCACTCAGATC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCGGTGCATAGAAAGCTaGTTTCTGGTCTTGAATGCT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSRCIES*FLVLNA
Trigger: AGCATTCAAGACCAGAAATCAGCTTTCTATGCACCG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTACGGTGCATAGAAAGCTaGTTTCTGGTCTTGAATGCT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLRCIES*FLVLNA
Trigger: AGCATTCAAGACCAGAAATCAGCTTTCTATGCACCG...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACTGCGCTTACAGTTATaGCGAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNILRLQL*RKAFPH
Trigger: GTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTGCGCTTACAGTTATaGCGAAAGGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLRLQL*RKAFPH
Trigger: GTGTGGGAAAGCCTTTCGTCATAACTGTAAGCGCAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAGTATGCTCTCGTTCATaGGCCCTGCGCTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIVCSRS*ALRLQL
Trigger: TAACTGTAAGCGCAGGGCTCATGAACGAGAGCATAC...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGTATGCTCTCGTTCATaGGCCCTGCGCTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRVCSRS*ALRLQL
Trigger: TAACTGTAAGCGCAGGGCTCATGAACGAGAGCATAC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATGATTGGTCAAGTTTaGCTTCCCACTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGMIGQV*LPTESF
Trigger: AAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCAT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCTCAGGACTGAACTATaGTGGAAGGCCATTCCACAT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTLRTEL*WKAIPH
Trigger: ATGTGGAATGGCCTTCCATCATAGTTCAGTCCTGAG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACTGACTACTGAGGTCTaGGAAACAGTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNILTTEV*ETVTGE
Trigger: CTCTCCAGTGACTGTTTCTCAGACCTCAGTAGTCAG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTTAACAGTCTTCCACTaGTGTCCTGGTTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLTVFH*CPGFFL
Trigger: TAGGAAGAAACCAGGACAGCAGTGGAAGACTGTTAA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATATGGATGGTAAGGGAATaGTTAAACTGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIWMVRE*LNWKAF
Trigger: GAAGGCCTTCCAGTTTAAGCATTCCCTTACCATCCA...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATGGATGGTAAGGGAATaGTTAAACTGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLWMVRE*LNWKAF
Trigger: GAAGGCCTTCCAGTTTAAGCATTCCCTTACCATCCA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCTGGATGGTAAGGGAATaGTTAAACTGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSWMVRE*LNWKAF
Trigger: GAAGGCCTTCCAGTTTAAGCATTCCCTTACCATCCA...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGTGTGGATTCTTTTGTaGTGCCTCAGGACTGAACTA +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSVWILL*CLRTEL
Trigger: TAGTTCAGTCCTGAGGCAGCACAAAAGAATCCACAC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCTGTCAAACACTGCCCTaGATTTGGGGTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSCQTLP*IWGSLA
Trigger: TGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACA...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATGTCAAACACTGCCCTaGATTTGGGGTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLCQTLP*IWGSLA
Trigger: TGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRSAATV*LNVSNT
Trigger: AGTGTTTGACACATTAAGCCAAACAGTAGCGGCACT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAAACAAGCTGTGAAGTaGCTCCAGTTGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRKQAVK*LQLMPA
Trigger: GGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGAAACAAGCTGTGAAGTaGCTCCAGTTGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRKQAVK*LQLMPA
Trigger: GGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAAAACAAGCTGTGAAGTaGCTCCAGTTGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRKQAVK*LQLMPA
Trigger: GGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAAACAAGCTGTGAAGTaGCTCCAGTTGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIKQAVK*LQLMPA
Trigger: GGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACTTCCACTGCTGTCCTaGTTTCTTCCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNILPLLS*FLPTGQ
Trigger: CTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTTCCACTGCTGTCCTaGTTTCTTCCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLPLLS*FLPTGQ
Trigger: CTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCTTCCACTGCTGTCCTaGTTTCTTCCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRLPLLS*FLPTGQ
Trigger: CTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTGCGGCAGGTTTCCTTaGCTTCCATCTTTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTCGRFP*LPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCACTGACTCTTGGGCCTaGCTCATTAGTGTGATATCT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSTDSWA*LISVIS
Trigger: AGATATCACACTAATGAGCCAGGCCCAAGAGTCAGT...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGAATGCTTAAACTaGAAGGCCTTCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRRECLN*KAFPQQ
Trigger: CTGCTGTGGGAAGGCCTTCCAGTTTAAGCATTCCCT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATGTTTCTCCCGAGTATaGATTCGTTTGTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGCFSRV*IRLCLL
Trigger: AAGCAAACACAAACGAATCCATACTCGGGAGAAACA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACGTTTCTCTTCAGTGTaGATCCTTCTGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIRFSSV*ILLCLV
Trigger: CACCAAACACAGAAGGATCCACACTGAAGAGAAACG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCGTTTCTCTTCAGTGTaGATCCTTCTGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSRFSSV*ILLCLV
Trigger: CACCAAACACAGAAGGATCCACACTGAAGAGAAACG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTGAGAAACAGTCACTaGAGAGAGGGATTTCCTACT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSLRNSH*REGFPT
Trigger: AGTAGGAAATCCCTCTCTCCAGTGACTGTTTCTCAG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACTGAGAAACAGTCACTaGAGAGAGGGATTTCCTACT +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGILRNSH*REGFPT
Trigger: AGTAGGAAATCCCTCTCTCCAGTGACTGTTTCTCAG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAACTTCTCGCTCCAGATaGGAGATTAAAGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLTSRSR*EIKGGL
Trigger: TAAACCTCCTTTAATCTCTCATCTGGAGCGAGAAGT...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCACTTCTCGCTCCAGATaGGAGATTAAAGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSTSRSR*EIKGGL
Trigger: TAAACCTCCTTTAATCTCTCATCTGGAGCGAGAAGT...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTTCTCGCTCCAGATaGGAGATTAAAGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGITSRSR*EIKGGL
Trigger: TAAACCTCCTTTAATCTCTCATCTGGAGCGAGAAGT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATCTAATTTGACATCCTaGACACAAACTTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGSNLTS*TQTSLT
Trigger: GGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCATGTCGGCAAAGAGCTaGTCTACTGTTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTMSAKS*STVESL
Trigger: AAGGCTTTCAACAGTAGATCAGCTCTTTGCCGACAT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGATGATTGGTCAAGTTTaGCTTCCCACTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRMIGQV*LPTESF
Trigger: AAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCAT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTCAGGACTGAACTATaGTGGAAGGCCATTCCACAT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLRTEL*WKAIPH
Trigger: ATGTGGAATGGCCTTCCATCATAGTTCAGTCCTGAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRSVISA*GRFPWL
Trigger: AAGCCAAGGAAACCTGCCGCAAGCAGATATCACACT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNISVISA*GRFPWL
Trigger: AAGCCAAGGAAACCTGCCGCAAGCAGATATCACACT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRSVISA*GRFPWL
Trigger: AAGCCAAGGAAACCTGCCGCAAGCAGATATCACACT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAAGAATTAGATCTGAGTaGCAACTGAAGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGRIRSE*QLKFLP
Trigger: TGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTGGATGGTAAGGGAATaGTTAAACTGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTWMVRE*LNWKAF
Trigger: GAAGGCCTTCCAGTTTAAGCATTCCCTTACCATCCA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTCGTTCATGAGCCCTaGGCTTACAGTTATGACGAA +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLVHEP*AYSYDE
Trigger: TTCGTCATAACTGTAAGCGCAGGGCTCATGAACGAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACTCGTTCATGAGCCCTaGGCTTACAGTTATGACGAA +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNILVHEP*AYSYDE
Trigger: TTCGTCATAACTGTAAGCGCAGGGCTCATGAACGAG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACTCGTTCATGAGCCCTaGGCTTACAGTTATGACGAA +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRLVHEP*AYSYDE
Trigger: TTCGTCATAACTGTAAGCGCAGGGCTCATGAACGAG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCTCGTTCATGAGCCCTaGGCTTACAGTTATGACGAA +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRLVHEP*AYSYDE
Trigger: TTCGTCATAACTGTAAGCGCAGGGCTCATGAACGAG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGTGTGGATTCTTTTGTaGTGCCTCAGGACTGAACTA +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTVWILL*CLRTEL
Trigger: TAGTTCAGTCCTGAGGCAGCACAAAAGAATCCACAC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACT +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSSAATV*LNVSNT
Trigger: AGTGTTTGACACATTAAGCCAAACAGTAGCGGCACT...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAGATGCCAGCCTCCTTTaGAGAACACATGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIDASLL*RTHVLV
Trigger: CACCAAAACATGTGTTCTCCAAAGGAGGCTGGCATC...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGATGCCAGCCTCCTTTaGAGAACACATGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRDASLL*RTHVLV
Trigger: CACCAAAACATGTGTTCTCCAAAGGAGGCTGGCATC...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAGATGCCAGCCTCCTTTaGAGAACACATGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRDASLL*RTHVLV
Trigger: CACCAAAACATGTGTTCTCCAAAGGAGGCTGGCATC...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCACTGACTCTTGGGCCTaGCTCATTAGTGTGATATCT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTTDSWA*LISVIS
Trigger: AGATATCACACTAATGAGCCAGGCCCAAGAGTCAGT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAAATGTCACTGACTCTTaGGCCTGGCTCATTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRNVTDS*AWLISV
Trigger: CACACTAATGAGCCAGGCCCAAGAGTCAGTGACATT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAATGTCACTGACTCTTaGGCCTGGCTCATTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRNVTDS*AWLISV
Trigger: CACACTAATGAGCCAGGCCCAAGAGTCAGTGACATT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTGTTTCTCCCGAGTATaGATTCGTTTGTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRCFSRV*IRLCLL
Trigger: AAGCAAACACAAACGAATCCATACTCGGGAGAAACA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAAACACTAAACCGCTGTaGTCTCACATCTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRNTKPL*SHILFP
Trigger: GGGAAACAAGATGTGAGATCACAGCGGTTTAGTGTT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCACTTCTCGCTCCAGATaGGAGATTAAAGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTTSRSR*EIKGGL
Trigger: TAAACCTCCTTTAATCTCTCATCTGGAGCGAGAAGT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTCTAATTTGACATCCTaGACACAAACTTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRSNLTS*TQTSLT
Trigger: GGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACGGTGCATAGAAAGCTaGTTTCTGGTCTTGAATGCT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRRCIES*FLVLNA
Trigger: AGCATTCAAGACCAGAAATCAGCTTTCTATGCACCG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACGGTGCATAGAAAGCTaGTTTCTGGTCTTGAATGCT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRRCIES*FLVLNA
Trigger: AGCATTCAAGACCAGAAATCAGCTTTCTATGCACCG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCGGTGCATAGAAAGCTaGTTTCTGGTCTTGAATGCT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRRCIES*FLVLNA
Trigger: AGCATTCAAGACCAGAAATCAGCTTTCTATGCACCG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAATGTCGGCAAAGAGCTaGTCTACTGTTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRMSAKS*STVESL
Trigger: AAGGCTTTCAACAGTAGATCAGCTCTTTGCCGACAT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGATGTCGGCAAAGAGCTaGTCTACTGTTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRMSAKS*STVESL
Trigger: AAGGCTTTCAACAGTAGATCAGCTCTTTGCCGACAT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAATGTCGGCAAAGAGCTaGTCTACTGTTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRMSAKS*STVESL
Trigger: AAGGCTTTCAACAGTAGATCAGCTCTTTGCCGACAT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAATGATTGGTCAAGTTTaGCTTCCCACTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIMIGQV*LPTESF
Trigger: AAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCAT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAATGATTGGTCAAGTTTaGCTTCCCACTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLMIGQV*LPTESF
Trigger: AAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCAT...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTTAACAGTCTTCCACTaGTGTCCTGGTTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTLTVFH*CPGFFL
Trigger: TAGGAAGAAACCAGGACAGCAGTGGAAGACTGTTAA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGATGGATGGTAAGGGAATaGTTAAACTGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRWMVRE*LNWKAF
Trigger: GAAGGCCTTCCAGTTTAAGCATTCCCTTACCATCCA...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATATGGATGGTAAGGGAATaGTTAAACTGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIWMVRE*LNWKAF
Trigger: GAAGGCCTTCCAGTTTAAGCATTCCCTTACCATCCA...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGTGTGGATTCTTTTGTaGTGCCTCAGGACTGAACTA +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRVWILL*CLRTEL
Trigger: TAGTTCAGTCCTGAGGCAGCACAAAAGAATCCACAC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAGTGTGGATTCTTTTGTaGTGCCTCAGGACTGAACTA +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRVWILL*CLRTEL
Trigger: TAGTTCAGTCCTGAGGCAGCACAAAAGAATCCACAC...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAGTGTGGATTCTTTTGTaGTGCCTCAGGACTGAACTA +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIVWILL*CLRTEL
Trigger: TAGTTCAGTCCTGAGGCAGCACAAAAGAATCCACAC...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGTGTCAAACACTGCCCTaGATTTGGGGTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRCQTLP*IWGSLA
Trigger: TGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACA...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAACTGACTCTTGGGCCTaGCTCATTAGTGTGATATCT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRTDSWA*LISVIS
Trigger: AGATATCACACTAATGAGCCAGGCCCAAGAGTCAGT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATGTTTCTCCCGAGTATaGATTCGTTTGTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLCFSRV*IRLCLL
Trigger: AAGCAAACACAAACGAATCCATACTCGGGAGAAACA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATACGTTTCTCTTCAGTGTaGATCCTTCTGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIRFSSV*ILLCLV
Trigger: CACCAAACACAGAAGGATCCACACTGAAGAGAAACG...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACGTTTCTCTTCAGTGTaGATCCTTCTGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRRFSSV*ILLCLV
Trigger: CACCAAACACAGAAGGATCCACACTGAAGAGAAACG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACGTTTCTCTTCAGTGTaGATCCTTCTGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRRFSSV*ILLCLV
Trigger: CACCAAACACAGAAGGATCCACACTGAAGAGAAACG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTGAGAAACAGTCACTaGAGAGAGGGATTTCCTACT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLRNSH*REGFPT
Trigger: AGTAGGAAATCCCTCTCTCCAGTGACTGTTTCTCAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACTGAGAAACAGTCACTaGAGAGAGGGATTTCCTACT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRLRNSH*REGFPT
Trigger: AGTAGGAAATCCCTCTCTCCAGTGACTGTTTCTCAG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAAAGGACAATGTCTTTaGGGAATCTCACAATTAAGG +
Preference number: 4 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRKGQCL*GISQLR
Trigger: CCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAACTTCTCGCTCCAGATaGGAGATTAAAGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRTSRSR*EIKGGL
Trigger: TAAACCTCCTTTAATCTCTCATCTGGAGCGAGAAGT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATATCTAATTTGACATCCTaGACACAAACTTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGISNLTS*TQTSLT
Trigger: GGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGA...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCTCTAATTTGACATCCTaGACACAAACTTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSSNLTS*TQTSLT
Trigger: GGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGA...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCATGATTGGTCAAGTTTaGCTTCCCACTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTMIGQV*LPTESF
Trigger: AAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCAT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATATTAACAGTCTTCCACTaGTGTCCTGGTTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNILTVFH*CPGFFL
Trigger: TAGGAAGAAACCAGGACAGCAGTGGAAGACTGTTAA...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGATTAACAGTCTTCCACTaGTGTCCTGGTTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRLTVFH*CPGFFL
Trigger: TAGGAAGAAACCAGGACAGCAGTGGAAGACTGTTAA...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAAGAATTAGATCTGAGTaGCAACTGAAGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIRIRSE*QLKFLP
Trigger: TGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCAGAATTAGATCTGAGTaGCAACTGAAGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSRIRSE*QLKFLP
Trigger: TGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCT...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACT +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRSAATV*LNVSNT
Trigger: AGTGTTTGACACATTAAGCCAAACAGTAGCGGCACT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACT +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRSAATV*LNVSNT
Trigger: AGTGTTTGACACATTAAGCCAAACAGTAGCGGCACT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACT +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRSAATV*LNVSNT
Trigger: AGTGTTTGACACATTAAGCCAAACAGTAGCGGCACT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNISAATV*LNVSNT
Trigger: AGTGTTTGACACATTAAGCCAAACAGTAGCGGCACT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTGTTTCTCCCGAGTATaGATTCGTTTGTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTCFSRV*IRLCLL
Trigger: AAGCAAACACAAACGAATCCATACTCGGGAGAAACA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAAAGGACAATGTCTTTaGGGAATCTCACAATTAAGG +
Preference number: 4 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLKGQCL*GISQLR
Trigger: CCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTCTAATTTGACATCCTaGACACAAACTTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTSNLTS*TQTSLT
Trigger: GGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAATGATTGGTCAAGTTTaGCTTCCCACTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIMIGQV*LPTESF
Trigger: AAAGCTTTCAGTGGGAAGTCAAACTTGACCAATCAT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGAATTAGATCTGAGTaGCAACTGAAGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTRIRSE*QLKFLP
Trigger: TGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAAAGGACAATGTCTTTaGGGAATCTCACAATTAAGG +
Preference number: 4 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTKGQCL*GISQLR
Trigger: CCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR TCA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGTCTAATTTGACATCCTaGACACAAACTTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRSNLTS*TQTSLT
Trigger: GGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGA...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAAGAATTAGATCTGAGTaGCAACTGAAGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRRIRSE*QLKFLP
Trigger: TGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAATTAGATCTGAGTaGCAACTGAAGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CLWGISQLRVRKSGITNIRIRSE*QLKFLP
Trigger: TGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR GCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGAATTAGATCTGAGTaGCAACTGAAGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRRIRSE*QLKFLP
Trigger: TGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAAAAGGACAATGTCTTTaGGGAATCTCACAATTAAGG +
Preference number: 4 (lower is better)
Translates to: LWGISQLRVRKSGITNIRKGQCL*GISQLR
Trigger: CCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CCA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAAAGGACAATGTCTTTaGGGAATCTCACAATTAAGG +
Preference number: 4 (lower is better)
Translates to: GISQLRVRKSGITNIRDRKGQCL*GISQLR
Trigger: CCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS TCA 90 bp GAGCTGGGTATCCTGGCGGGTCCAAAGCAGCTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCACAACCTCCTGCATCTTTTTACTCAG +
Preference number: 5 (lower is better)
Translates to: ELGILAGPKQLAWWS*TLIQQHNLLHLFTQ
Trigger: CTGAGTAAAAAGATGCAGGAGGTTGTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCGCCAGGATACCCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 90 bp GTGCCAGCCAAAGGGCCCTTCTTGACCCACAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACTGCCCTGGATTTGGGGTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: VPAKGPFLTHSAATV*LNVSNTALDLGFIS
Trigger: GCTAATGAACCCCAAATCCAGGGCAGTGTTTGACACATTAAGCCAAACAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGCTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS GCA 90 bp GGGCCTCAGCTCACTTGGGCCTGGCTCATTAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTTCCATCTTTAGTGAAGGCAGGATAT +
Preference number: 5 (lower is better)
Translates to: GPQLTWAWLISVISA*GRFPWLPSLVKAGY
Trigger: ATATCCTGCCTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAAGCAGATATCACACTAATGAGCCAGGCCCAAGTGAGCTGAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS CCA 90 bp TCTCAAACAAGCTGTGAAGTGGCTCCAGTTGATGCCAGCCTCCTTTaGAGAACACATGTTTTGGTGGTGCCAGCCAAAGGGCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SQTSCEVAPVDASLL*RTHVLVVPAKGPFL
Trigger: CAAGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 90 bp ATGTATTTTCAAGGAGGAGGAAAGGGGCCTCAGCTCACTTGGGCCTaGCTCATTAGTGTGATATCTGCTTGCGGCAGGTTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: MYFQGGGKGPQLTWA*LISVISACGRFPWL
Trigger: AAGCCAAGGAAACCTGCCGCAAGCAGATATCACACTAATGAGCCAGGCCCAAGTGAGCTGAGGCCCCTTTCCTCCTCCTTGAAAATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS CCA 90 bp GTAGTGATGTATTTTCAAGGAGGAGGAAAGGGGCCTCAGCTCACTTaGGCCTGGCTCATTAGTGTGATATCTGCTTGCGGCAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: VVMYFQGGGKGPQLT*AWLISVISACGRFP
Trigger: AGGAAACCTGCCGCAAGCAGATATCACACTAATGAGCCAGGCCCAAGTGAGCTGAGGCCCCTTTCCTCCTCCTTGAAAATACATCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS TCA 90 bp TTTGGAGAACACATGTTTTGGTGGTGCCAGCCAAAGGGCCCTTCTTaGCCCACAGTGCCGCTACTGTTTGGCTTAATGTGTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: FGEHMFWWCQPKGPS*PTVPLLFGLMCQTL
Trigger: CAGTGTTTGACACATTAAGCCAAACAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAGCCAAAGGGCCCTTCTaGACCCACAGTGCCGCTACT +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGAKGPF*THSAAT
Trigger: AGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGC...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 90 bp CCCACAGTGCCGCTACTGTTTGGCTTAATGTGTCAAACACTGCCCTaGATTTGGGGTTCATTAGCAACACTAAACCGCTGTGATCTCACA +
Preference number: 5 (lower is better)
Translates to: PTVPLLFGLMCQTLP*IWGSLATLNRCDLT
Trigger: TGTGAGATCACAGCGGTTTAGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACACATTAAGCCAAACAGTAGCGGCACTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 90 bp TGGGCCTGGCTCATTAGTGTGATATCTGCTTGCGGCAGGTTTCCTTaGCTTCCATCTTTAGTGAAGGCAGGATATGGAGCAGGTAATAGA +
Preference number: 5 (lower is better)
Translates to: WAWLISVISACGRFP*LPSLVKAGYGAGNR
Trigger: TCTATTACCTGCTCCATATCCTGCCTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAAGCAGATATCACACTAATGAGCCAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGCCAAAGGGCCCTTCTaGACCCACAGTGCCGCTACT +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRAKGPF*THSAAT
Trigger: AGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS GCA 90 bp AATGTCACTGACTCTTGGGCCTGGCTCATTAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTTCCATCTTTAGTGAAGGCAGGATAT +
Preference number: 5 (lower is better)
Translates to: NVTDSWAWLISVISA*GRFPWLPSLVKAGY
Trigger: ATATCCTGCCTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAAGCAGATATCACACTAATGAGCCAGGCCCAAGAGTCAGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGCCAAAGGGCCCTTCTaGACCCACAGTGCCGCTACT +
Preference number: 5 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSAKGPF*THSAAT
Trigger: AGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAGACGGTTCCTGGTCTaGAAGGCCTTCCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRRRFLV*KAFPQS
Trigger: GGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 90 bp GTGCCGCTACTGTTTGGCTTAATGTGTCAAACACTGCCCTGGATTTaGGGTTCATTAGCAACACTAAACCGCTGTGATCTCACATCTTGT +
Preference number: 5 (lower is better)
Translates to: VPLLFGLMCQTLPWI*GSLATLNRCDLTSC
Trigger: ACAAGATGTGAGATCACAGCGGTTTAGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACACATTAAGCCAAACAGTAGCGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGCCAAAGGGCCCTTCTaGACCCACAGTGCCGCTACT +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTAKGPF*THSAAT
Trigger: AGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRVKWLQ*MPASFG
Trigger: TCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCAC...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAAGACGGTTCCTGGTCTaGAAGGCCTTCCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIRRFLV*KAFPQS
Trigger: GGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAGCCAAAGGGCCCTTCTaGACCCACAGTGCCGCTACT +
Preference number: 5 (lower is better)
Translates to: CLWGISQLRVRKSGITNIAKGPF*THSAAT
Trigger: AGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGC...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSVKWLQ*MPASFG
Trigger: TCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCAC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGACGGTTCCTGGTCTaGAAGGCCTTCCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTRRFLV*KAFPQS
Trigger: GGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAAACACTGCCCTGGATTaGGGGTTCATTAGCAACACT +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGNTALD*GFISNT
Trigger: AGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTT...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATGGAGAACACATGTTTaGGTGGTGCCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLWRTHV*VVPAKG
Trigger: CCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCTGGAGAACACATGTTTaGGTGGTGCCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSWRTHV*VVPAKG
Trigger: CCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCA...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATATGGAGAACACATGTTTaGGTGGTGCCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIWRTHV*VVPAKG
Trigger: CCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCA...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTVKWLQ*MPASFG
Trigger: TCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCAC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATTGCGGCAGGTTTCCTaGGCTTCCATCTTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGLRQVS*ASIFSE
Trigger: TTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACTTATAGAGATGCCTTaGAGCGTAGGTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGLIEMP*SVGQTL
Trigger: CAGTGTCTGACCTACGCTCAAAGGCATCTCTATAAG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATGCCAACTGAAGTTTTaGCCACACCTGGCACATTCA +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGCQLKF*PHLAHS
Trigger: TGAATGTGCCAGGTGTGGCAAAAACTTCAGTTGGCA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACGGTTCCTGGTCTaGAAGGCCTTCCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: CLWGISQLRVRKSGITNIRRFLV*KAFPQS
Trigger: GGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCT...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGAGACGGTTCCTGGTCTaGAAGGCCTTCCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRRRFLV*KAFPQS
Trigger: GGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCT...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGACGGTTCCTGGTCTaGAAGGCCTTCCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: GISQLRVRKSGITNIRDRRRFLV*KAFPQS
Trigger: GGACTGTGGGAAGGCCTTCAAGACCAGGAACCGTCT...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATGGATTCGTTTGTGTTaGCTTAGGTCTGAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGWIRLC*LRSELR
Trigger: TCGGAGCTCAGACCTAAGCAAACACAAACGAATCCA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS GCA 90 bp AACCTCCTGCATCTTTTTACTCAGGTTTCTTTAACAGTCTTCCACTaGTGTCCTGGTTTCTTCCTACTGGTCAGATCCAGTTCTCAAACA +
Preference number: 5 (lower is better)
Translates to: NLLHLFTQVSLTVFH*CPGFFLLVRSSSQT
Trigger: TGTTTGAGAACTGGATCTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAGACTGTTAAAGAAACCTGAGTAAAAAGATGCAGGAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS GCA 90 bp TACCTCCTGCATCTTTTTACTCAGGTTTCTTTAACAGTCTTCCACTaGTGTCCTGGTTTCTTCCTACTGGTCAGATCCAGTTCTCAAACA +
Preference number: 5 (lower is better)
Translates to: YLLHLFTQVSLTVFH*CPGFFLLVRSSSQT
Trigger: TGTTTGAGAACTGGATCTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAGACTGTTAAAGAAACCTGAGTAAAAAGATGCAGGAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGAACACTGCCCTGGATTaGGGGTTCATTAGCAACACT +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRNTALD*GFISNT
Trigger: AGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTT...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRVKWLQ*MPASFG
Trigger: TCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCAC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LWGISQLRVRKSGITNIRVKWLQ*MPASFG
Trigger: TCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCAC...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: GISQLRVRKSGITNIRDRVKWLQ*MPASFG
Trigger: TCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCAC...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTTGCGGCAGGTTTCCTaGGCTTCCATCTTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRLRQVS*ASIFSE
Trigger: TTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATCTCTTGTTGTGAACTaGCCTTTTCATTCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGSLVVN*PFHSQA
Trigger: GGCCTGAGAATGAAAAGGCAAGTTCACAACAAGAGA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGATGGTTCTTTCCTTTTTaGCAGGTCACTTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGWFFPF*QVTSSE
Trigger: CTCTGAGGAAGTGACCTGCAAAAAAGGAAAGAACCA...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTGGATTCGTTTGTGTTaGCTTAGGTCTGAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRWIRLC*LRSELR
Trigger: TCGGAGCTCAGACCTAAGCAAACACAAACGAATCCA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTGGATCCTTCTGTGTTaGGTGAGTTCTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRWILLC*VSSALM
Trigger: CATCAAGGCAGAACTCACCAAACACAGAAGGATCCA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAACACTGCCCTGGATTaGGGGTTCATTAGCAACACT +
Preference number: 5 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLNTALD*GFISNT
Trigger: AGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTT...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAAACACTGCCCTGGATTaGGGGTTCATTAGCAACACT +
Preference number: 5 (lower is better)
Translates to: KGQCLWGISQLRVRKSGINTALD*GFISNT
Trigger: AGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTT...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGATGGAGAACACATGTTTaGGTGGTGCCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LWGISQLRVRKSGITNIRWRTHV*VVPAKG
Trigger: CCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCA...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTTATAGAGATGCCTTaGAGCGTAGGTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSLIEMP*SVGQTL
Trigger: CAGTGTCTGACCTACGCTCAAAGGCATCTCTATAAG...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAAGAGGTAGGTGGTTCTTTCCTTTTTaGCAGGTCACTTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RKSGITNIRDRRTSLRGRWFFPF*QVTSSE
Trigger: CTCTGAGGAAGTGACCTGCAAAAAAGGAAAGAACCA...CCTACCTCTTAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATGGATCCTTCTGTGTTaGGTGAGTTCTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLWILLC*VSSALM
Trigger: CATCAAGGCAGAACTCACCAAACACAGAAGGATCCA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCTGGATCCTTCTGTGTTaGGTGAGTTCTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSWILLC*VSSALM
Trigger: CATCAAGGCAGAACTCACCAAACACAGAAGGATCCA...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAACACTGCCCTGGATTaGGGGTTCATTAGCAACACT +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTNTALD*GFISNT
Trigger: AGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTT...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTTGCGGCAGGTTTCCTaGGCTTCCATCTTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTLRQVS*ASIFSE
Trigger: TTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCTTATAGAGATGCCTTaGAGCGTAGGTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTLIEMP*SVGQTL
Trigger: CAGTGTCTGACCTACGCTCAAAGGCATCTCTATAAG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCTCTCTTGTTGTGAACTaGCCTTTTCATTCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSSLVVN*PFHSQA
Trigger: GGCCTGAGAATGAAAAGGCAAGTTCACAACAAGAGA...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATCTCTTGTTGTGAACTaGCCTTTTCATTCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLSLVVN*PFHSQA
Trigger: GGCCTGAGAATGAAAAGGCAAGTTCACAACAAGAGA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTATGGTTCTTTCCTTTTTaGCAGGTCACTTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLWFFPF*QVTSSE
Trigger: CTCTGAGGAAGTGACCTGCAAAAAAGGAAAGAACCA...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTGGATTCGTTTGTGTTaGCTTAGGTCTGAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTWIRLC*LRSELR
Trigger: TCGGAGCTCAGACCTAAGCAAACACAAACGAATCCA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGACACATCTTGTTTCCCTaGCTTTACATGAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGHILFP*LYMNSS
Trigger: AGAAGAATTCATGTAAAGCAAGGGAAACAAGATGTG...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGATTGCGGCAGGTTTCCTaGGCTTCCATCTTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: GISQLRVRKSGITNIRDRLRQVS*ASIFSE
Trigger: TTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAA...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGTTGCGGCAGGTTTCCTaGGCTTCCATCTTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRLRQVS*ASIFSE
Trigger: TTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAA...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATATTGCGGCAGGTTTCCTaGGCTTCCATCTTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: CLWGISQLRVRKSGITNILRQVS*ASIFSE
Trigger: TTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAA...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGACTTATAGAGATGCCTTaGAGCGTAGGTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: LWGISQLRVRKSGITNIRLIEMP*SVGQTL
Trigger: CAGTGTCTGACCTACGCTCAAAGGCATCTCTATAAG...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCTTATAGAGATGCCTTaGAGCGTAGGTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRLIEMP*SVGQTL
Trigger: CAGTGTCTGACCTACGCTCAAAGGCATCTCTATAAG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCTCTCTTGTTGTGAACTaGCCTTTTCATTCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTSLVVN*PFHSQA
Trigger: GGCCTGAGAATGAAAAGGCAAGTTCACAACAAGAGA...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATATGCCAACTGAAGTTTTaGCCACACCTGGCACATTCA +
Preference number: 5 (lower is better)
Translates to: CLWGISQLRVRKSGITNICQLKF*PHLAHS
Trigger: TGAATGTGCCAGGTGTGGCAAAAACTTCAGTTGGCA...TATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGTGCCAACTGAAGTTTTaGCCACACCTGGCACATTCA +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRCQLKF*PHLAHS
Trigger: TGAATGTGCCAGGTGTGGCAAAAACTTCAGTTGGCA...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGATGCCAACTGAAGTTTTaGCCACACCTGGCACATTCA +
Preference number: 5 (lower is better)
Translates to: LWGISQLRVRKSGITNIRCQLKF*PHLAHS
Trigger: TGAATGTGCCAGGTGTGGCAAAAACTTCAGTTGGCA...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGATGGATTCGTTTGTGTTaGCTTAGGTCTGAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: GISQLRVRKSGITNIRDRWIRLC*LRSELR
Trigger: TCGGAGCTCAGACCTAAGCAAACACAAACGAATCCA...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGATGGATTCGTTTGTGTTaGCTTAGGTCTGAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: LWGISQLRVRKSGITNIRWIRLC*LRSELR
Trigger: TCGGAGCTCAGACCTAAGCAAACACAAACGAATCCA...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGATGGATCCTTCTGTGTTaGGTGAGTTCTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: GISQLRVRKSGITNIRDRWILLC*VSSALM
Trigger: CATCAAGGCAGAACTCACCAAACACAGAAGGATCCA...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGTAAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAGTGATTGATAAACTCTaGGAAGTAAATGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: GKGQCLWGISQLRVRKSGVIDKL*EVNVLT
Trigger: AGTGAGCACATTTACTTCCAAGAGTTTATCAATCAC...TCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGATCTCTTGTTGTGAACTaGCCTTTTCATTCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LWGISQLRVRKSGITNIRSLVVN*PFHSQA
Trigger: GGCCTGAGAATGAAAAGGCAAGTTCACAACAAGAGA...TCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGTGGTTCTTTCCTTTTTaGCAGGTCACTTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRWFFPF*QVTSSE
Trigger: CTCTGAGGAAGTGACCTGCAAAAAAGGAAAGAACCA...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp AAAGGACAATGTCTTTGGGGAATCTCACAATTAAGGGTCAGGAAATCAGGAATACACATCTTGTTTCCCTaGCTTTACATGAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: KGQCLWGISQLRVRKSGIHILFP*LYMNSS
Trigger: AGAAGAATTCATGTAAAGCAAGGGAAACAAGATGTG...TATTCCTGATTTCCTGACCCTTAATTGTGAGATTCCCCAAAGACATTGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp CAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCGTGATTGATAAACTCTaGGAAGTAAATGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: QLRVRKSGITNIRDRRTSVIDKL*EVNVLT
Trigger: AGTGAGCACATTTACTTCCAAGAGTTTATCAATCAC...GCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCAGCCTAGTGATTGATAAACTCTaGGAAGTAAATGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: LRVRKSGITNIRDRRTSLVIDKL*EVNVLT
Trigger: AGTGAGCACATTTACTTCCAAGAGTTTATCAATCAC...TAGGCTGGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCCACATCTTGTTTCCCTaGCTTTACATGAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTHILFP*LYMNSS
Trigger: AGAAGAATTCATGTAAAGCAAGGGAAACAAGATGTG...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp TCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGACCGTGATTGATAAACTCTaGGAAGTAAATGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: SQLRVRKSGITNIRDRRTVIDKL*EVNVLT
Trigger: AGTGAGCACATTTACTTCCAAGAGTTTATCAATCAC...GGTCCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000458265.2
CDS-3UTR CAA 90 bp GGAATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGACACATCTTGTTTCCCTaGCTTTACATGAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GISQLRVRKSGITNIRDRHILFP*LYMNSS
Trigger: AGAAGAATTCATGTAAAGCAAGGGAAACAAGATGTG...TCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGATTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGCACATCTTGTTTCCCTaGCTTTACATGAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRHILFP*LYMNSS
Trigger: AGAAGAATTCATGTAAAGCAAGGGAAACAAGATGTG...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS-3UTR CAA 90 bp ATCTCACAATTAAGGGTCAGGAAATCAGGAATAACTAATATAAGAGACAGAAGGGTGATTGATAAACTCTaGGAAGTAAATGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: ISQLRVRKSGITNIRDRRVIDKL*EVNVLT
Trigger: AGTGAGCACATTTACTTCCAAGAGTTTATCAATCAC...CCTTCTGTCTCTTATATTAGTTATTCCTGATTTCCTGACCCTTAATTGTGAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000458265.2
CDS CAA 90 bp TTTCCTGAGGGAGCTGGGTATCCTGGCGGGTCCAAAGCAGCTGGCTaGGTGGTCCTGAACTCTCATCCAACAGCACAACCTCCTGCATCT +
Preference number: 6 (lower is better)
Translates to: FPEGAGYPGGSKAAG*VVLNSHPTAQPPAS
Trigger: AGATGCAGGAGGTTGTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCGCCAGGATACCCAGCTCCCTCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS TCA 72 bp ATCCTGGCGGGTCCAAAGCAGCTGGCTTGGTGGTCCTaGACTCTCATCCAACAGCACAACCTCCTGCATCTT +
Preference number: 6 (lower is better)
Translates to: ILAGPKQLAWWS*TLIQQHNLLHL
Trigger: AAGATGCAGGAGGTTGTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCGCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CAA 90 bp TTTCCTGAGGGAGCTGGGTATCCTGGCGGGTCCAAAGCAGCTGGCTaGGTGGTCCTGAACTCTCATCCAACAGCACAACTTCTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: FPEGAGYPGGSKAAG*VVLNSHPTAQLLLL
Trigger: AAGAAGGAGAAGTTGTGCTGTTGGATGAGAGTTCAGGACCACCAAGCCAGCTGCTTTGGACCCGCCAGGATACCCAGCTCCCTCAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS CCA 72 bp AGCTGTGAAGTGGCTCCAGTTGATGCCAGCCTCCTTTaGAGAACACATGTTTTGGTGGTGCCAGCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: SCEVAPVDASLL*RTHVLVVPAKG
Trigger: CCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS TCA 72 bp CACATGTTTTGGTGGTGCCAGCCAAAGGGCCCTTCTTaGCCCACAGTGCCGCTACTGTTTGGCTTAATGTGT +
Preference number: 6 (lower is better)
Translates to: HMFWWCQPKGPS*PTVPLLFGLMC
Trigger: ACACATTAAGCCAAACAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 72 bp AAAGGGCCCTTCTTGACCCACAGTGCCGCTACTGTTTaGCTTAATGTGTCAAACACTGCCCTGGATTTGGGG +
Preference number: 6 (lower is better)
Translates to: KGPFLTHSAATV*LNVSNTALDLG
Trigger: CCCCAAATCCAGGGCAGTGTTTGACACATTAAGCCAAACAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 72 bp TATTTTCAAGGAGGAGGAAAGGGGCCTCAGCTCACTTaGGCCTGGCTCATTAGTGTGATATCTGCTTGCGGC +
Preference number: 6 (lower is better)
Translates to: YFQGGGKGPQLT*AWLISVISACG
Trigger: GCCGCAAGCAGATATCACACTAATGAGCCAGGCCCAAGTGAGCTGAGGCCCCTTTCCTCCTCCTTGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS CAA 72 bp ACACATGTTTTGGTGGTGCCAGCCAAAGGGCCCTTCTaGACCCACAGTGCCGCTACTGTTTGGCTTAATGTG +
Preference number: 6 (lower is better)
Translates to: THVLVVPAKGPF*THSAATVWLNV
Trigger: CACATTAAGCCAAACAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CAA 90 bp CTTTGGAGAACACATGTTTTGGTGGTGCCAGCCAAAGGGCCCTTCTaGACCCACAGTGCCGCTACTGTTTGGCTTAATGTGTCAAACACT +
Preference number: 6 (lower is better)
Translates to: LWRTHVLVVPAKGPF*THSAATVWLNVSNT
Trigger: AGTGTTTGACACATTAAGCCAAACAGTAGCGGCACTGTGGGTCAAGAAGGGCCCTTTGGCTGGCACCACCAAAACATGTGTTCTCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CAA 90 bp TACTGGTCAGATCCAGTTCTCAAACAAGCTGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTTGGAGAACACATGTTTTGGTGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: YWSDPVLKQAVKWLQ*MPASFGEHMFWWCQ
Trigger: CTGGCACCACCAAAACATGTGTTCTCCAAAGGAGGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTTGAGAACTGGATCTGACCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS GCA 72 bp GACTCTTGGGCCTGGCTCATTAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTTCCATCTTTAGTGAAG +
Preference number: 6 (lower is better)
Translates to: DSWAWLISVISA*GRFPWLPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAAGCAGATATCACACTAATGAGCCAGGCCCAAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS GCA 72 bp CTCACTTGGGCCTGGCTCATTAGTGTGATATCTGCTTaGGGCAGGTTTCCTTGGCTTCCATCTTTAGTGAAG +
Preference number: 6 (lower is better)
Translates to: LTWAWLISVISA*GRFPWLPSLVK
Trigger: CTTCACTAAAGATGGAAGCCAAGGAAACCTGCCGCAAGCAGATATCACACTAATGAGCCAGGCCCAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS CCA 72 bp CCGCTACTGTTTGGCTTAATGTGTCAAACACTGCCCTaGATTTGGGGTTCATTAGCAACACTAAACCGCTGT +
Preference number: 6 (lower is better)
Translates to: PLLFGLMCQTLP*IWGSLATLNRC
Trigger: ACAGCGGTTTAGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACACATTAAGCCAAACAGTAGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CCA 72 bp CTGTTTGGCTTAATGTGTCAAACACTGCCCTGGATTTaGGGTTCATTAGCAACACTAAACCGCTGTGATCTC +
Preference number: 6 (lower is better)
Translates to: LFGLMCQTLPWI*GSLATLNRCDL
Trigger: GAGATCACAGCGGTTTAGTGTTGCTAATGAACCCCAAATCCAGGGCAGTGTTTGACACATTAAGCCAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CAA 72 bp CTCTTAGGCTCCATGAGGGCAGGAATTTTTGTCGTCTaGTTCACAGTTGTATTCTCAACGCCTAAAACAGCG +
Preference number: 6 (lower is better)
Translates to: LLGSMRAGIFVV*FTVVFSTPKTA
Trigger: CGCTGTTTTAGGCGTTGAGAATACAACTGTGAACAAGACGACAAAAATTCCTGCCCTCATGGAGCCTAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS CAA 72 bp GATCCAGTTCTCAAACAAGCTGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTGCTTTACATGAATTCTTCT +
Preference number: 6 (lower is better)
Translates to: DPVLKQAVKWLQ*MPASLLYMNSS
Trigger: AGAAGAATTCATGTAAAGCAAGGAGGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTTGAGAACTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS CAA 90 bp TACTGGTCAGATCCAGTTCTCAAACAAGCTGTGAAGTGGCTCCAGTaGATGCCAGCCTCCTTGCTTTACATGAATTCTTCTTTTCCTCTA +
Preference number: 6 (lower is better)
Translates to: YWSDPVLKQAVKWLQ*MPASLLYMNSSFPL
Trigger: TAGAGGAAAAGAAGAATTCATGTAAAGCAAGGAGGCTGGCATCAACTGGAGCCACTTCACAGCTTGTTTGAGAACTGGATCTGACCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS GCA 72 bp CATCTTTTTACTCAGGTTTCTTTAACAGTCTTCCACTaGTGTCCTGGTTTCTTCCTACTGGTCAGATCCAGT +
Preference number: 6 (lower is better)
Translates to: HLFTQVSLTVFH*CPGFFLLVRSS
Trigger: ACTGGATCTGACCAGTAGGAAGAAACCAGGACAGCAGTGGAAGACTGTTAAAGAAACCTGAGTAAAAAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
ENST00000466714.1
ENST00000474196.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1
CDS TCA 72 bp CTGGATTTGGGGTTCATTAGCAACACTAAACCGCTGTaGTCTCACATCTTGTTTCCCTTGCTTTACATGAAT +
Preference number: 6 (lower is better)
Translates to: LDLGFISNTKPL*SHILFPLLYMN
Trigger: ATTCATGTAAAGCAAGGGAAACAAGATGTGAGATCACAGCGGTTTAGTGTTGCTAATGAACCCCAAATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377179.4
ENST00000383655.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
CDS CAA 72 bp CCAGTATGGTGCATAAGTTACTTATTAATATATACATaGTTTACGGTGGTTCTACCTTCGCTAAAATCTAGG +
Preference number: 6 (lower is better)
Translates to: PVWCISYLLIYT*FTVVLPSLKSR
Trigger: CCTAGATTTTAGCGAAGGTAGAACCACCGTAAACAATGTATATATTAATAAGTAACTTATGCACCATACTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000377179.4
ENST00000426120.2
ENST00000429714.2
ENST00000436574.2
ENST00000452316.2
ENST00000458265.2
ENST00000466714.1
ENST00000481554.1
ENST00000483450.1
ENST00000484052.1
ENST00000487312.1
ENST00000490260.1