RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF304 (Homo sapiens)

Ensembl gene IDs: ENSG00000131845

Ensembl transcript IDs: ENST00000282286.6, ENST00000391705.7, ENST00000443917.6, ENST00000598744.1

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGCTaGGGTTCCTGTCTGTGCAGGTCAACTGCCCAGGGAGACACAGGA +
Preference number: 1 (lower is better)
Translates to: LGQRRPIPGSLFCHC*GSCLCRSTAQGDTG
Trigger: TCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGACAGGAACCTCAGCAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR CCA 90 bp CCTCAGTCACTCGGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTaGATCTCTCTTCTGTCACTGCTGAGGTTCCTGTCTGTGCAGGTC +
Preference number: 1 (lower is better)
Translates to: PQSLGMLAGSEKTHP*ISLLSLLRFLSVQV
Trigger: GACCTGCACAGACAGGAACCTCAGCAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGTGACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR GCA 90 bp AACTTATGTTGCTTCCACAAGCACAGGAGATTTTCGCACCAACTATaGCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAC +
Preference number: 1 (lower is better)
Translates to: NLCCFHKHRRFSHQL*PPHWAHRKSWQPGH
Trigger: GTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAAAATCTCCTGTGCTTGTGGAAGCAACATAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR TCA 90 bp GAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGGTACTCACAGAGCATTGCTCTGGTG +
Preference number: 1 (lower is better)
Translates to: ESPQGGMNIRCSSAS*WFPHKGYSQSIALV
Trigger: CACCAGAGCAATGCTCTGTGAGTACCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR TCA 90 bp CCTCCCACATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATaGATATACGGTGCTCATCTGCTAGCTGATGGTTCCCTCACAAAG +
Preference number: 1 (lower is better)
Translates to: PPTYVVLIRNLPRVE*IYGAHLLADGSLTK
Trigger: CTTTGTGAGGGAACCATCAGCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATATGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR GCA 90 bp AACAGTGCTGGGGAGTACGTGACAGTTAAGGGACCCAACTTATGTTaGTTCCACAAGCACAGGAGATTTTCGCACCAACTATGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: NSAGEYVTVKGPNLC*FHKHRRFSHQLCPP
Trigger: AGGAGGGCATAGTTGGTGCGAAAATCTCCTGTGCTTGTGGAAGCAACATAAGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR GCA 90 bp TGCACTCCCATCCCACACCATCATAACTGCACCGAGACTTGTGGATaGCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCACAGTCAT +
Preference number: 1 (lower is better)
Translates to: CTPIPHHHNCTETCG*PSRMFESPFVCHSH
Trigger: ATGACTGTGGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGATGGGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR TCA 90 bp TACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTaGTCCTGTACAGGTACAGAAGACAGCAATCCCTCAACAGTGCTG +
Preference number: 1 (lower is better)
Translates to: YSQCYLPMGFWISGT*SCTGTEDSNPSTVL
Trigger: CAGCACTGTTGAGGGATTGCTGTCTTCTGTACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR CCA 90 bp TTCACATTGCCCTACAGAGGTCTTACAGTCAATGTTACTTGCCTATaGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGTACAGAAG +
Preference number: 1 (lower is better)
Translates to: FTLPYRGLTVNVTCL*GSGYQGLDPVQVQK
Trigger: CTTCTGTACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAGACCTCTGTAGGGCAATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR GCA 90 bp TCTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTaGCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATGGG +
Preference number: 1 (lower is better)
Translates to: SQSTLHSNKIPKSKD*HNRPLSLYKSEQHG
Trigger: CCCATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR GCA 90 bp ATGATTTTCACATTGCCCTACAGAGGTCTTACAGTCAATGTTACTTaGCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGTA +
Preference number: 1 (lower is better)
Translates to: MIFTLPYRGLTVNVT*LWGSGYQGLDPVQV
Trigger: TACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAGACCTCTGTAGGGCAATGTGAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCATGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGG +
Preference number: 2 (lower is better)
Translates to: APTMPSSLGSQEILAARPCSSAS*WFPHKG
Trigger: CCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCA...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACACAGGCACTGGCAGTaGTATAATTCCATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: APTMPSSLGSQEILAARPHRHWQ*YNSIKS
Trigger: GCTCTTGATGGAATTATATCACTGCCAGTGCCTGTG...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAGCAAAATGGAGTGATTaGCACACACAGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: APTMPSSLGSQEILAARPAKWSD*HTQLVA
Trigger: TGCTACCAGCTGTGTGTGTCAATCACTCCATTTTGC...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAACTGGTAGCAATAAGATaGCTTCCGCCACAGGCACTG +
Preference number: 2 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKLVAIR*LPPQAL
Trigger: CAGTGCCTGTGGCGGAAGCCATCTTATTGCTACCAG...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR TCA 90 bp TGCACTCCCATCCCACACCATCATAACTGCACCGAGACTTGTGGATGCCCCTCTTGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGG +
Preference number: 2 (lower is better)
Translates to: CTPIPHHHNCTETCGCPSCSSAS*WFPHKG
Trigger: CCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCA...AGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGATGGGAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR GCA 90 bp TTCGCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: FAPTMPSSLGSQEILAARVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...CCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR GCA 90 bp ACTCGGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCGCAATCCCTCAACAGTaGTGGGGAGTACGTGACAGT +
Preference number: 2 (lower is better)
Translates to: TRNAGWVREDPSLDLSSVAIPQQ*WGVRDS
Trigger: ACTGTCACGTACTCCCCAGCACTGTTGAGGGATTGC...GACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CCA 90 bp TTCGCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 2 (lower is better)
Translates to: FAPTMPSSLGSQEILAARSLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...CCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGGCAAAATGGAGTGATTaGCACACACAGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: NYALLTGLTGNPGSQATKAKWSD*HTQLVA
Trigger: TGCTACCAGCTGTGTGTGTCAATCACTCCATTTTGC...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR TCA 90 bp ACTCGGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCGCAAAATGGAGTGATTaGCACACACAGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: TRNAGWVREDPSLDLSSVAKWSD*HTQLVA
Trigger: TGCTACCAGCTGTGTGTGTCAATCACTCCATTTTGC...GACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGG +
Preference number: 2 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCCSSAS*WFPHKG
Trigger: CCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCA...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp TGCACTCCCATCCCACACCATCATAACTGCACCGAGACTTGTGGATGCCCCTCTAATGTTACTTGCCTATaGGGTTCTGGATATCAGGGA +
Preference number: 2 (lower is better)
Translates to: CTPIPHHHNCTETCGCPSNVTCL*GSGYQG
Trigger: TCCCTGATATCCAGAACCCCATAGGCAAGTAACATT...AGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGATGGGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR CAA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTaGTTTGCCACAGTCATCCCCACTCCATTATCTCAGTGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: APRLVDAPLECSNLL*FATVIPTPLSQCFC
Trigger: ACAGAAGCACTGAGATAATGGAGTGGGGATGACTGTGGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGCTCCCCAGGGTGGAATaGATATACGGTGCTCATCTG +
Preference number: 2 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRLPRVE*IYGAHL
Trigger: CAGATGAGCACCGTATATTCATTCCACCCTGGGGAG...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCGCAAAATGGAGTGATTaGCACACACAGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: APRLVDAPLECSNLLLFAAKWSD*HTQLVA
Trigger: TGCTACCAGCTGTGTGTGTCAATCACTCCATTTTGC...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR GCA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGTTTTCGCACCAACTATaGCCTCCTCACTGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRFSHQL*PPHWAH
Trigger: GTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAAAA...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTCACAGAGCATTGCTCTaGTGTGAGTCCTATGAGGAT +
Preference number: 2 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGHRALL*CESYED
Trigger: ATCCTCATAGGACTCACACCAGAGCAATGCTCTGTG...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTCACAGAGCATTGCTCTaGTGTGAGTCCTATGAGGAT +
Preference number: 2 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCHRALL*CESYED
Trigger: ATCCTCATAGGACTCACACCAGAGCAATGCTCTGTG...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR TCA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGGTGCAACACACCTCATaGAAGCCTCCCACATATGTG +
Preference number: 2 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRVQHTS*KPPTYV
Trigger: CACATATGTGGGAGGCTTTCATGAGGTGTGTTGCAC...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTGTGCAACACACCTCATaGAAGCCTCCCACATATGTG +
Preference number: 2 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFVQHTS*KPPTYV
Trigger: CACATATGTGGGAGGCTTTCATGAGGTGTGTTGCAC...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR TCA 90 bp GTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGTACAGCTGAGCAAAATGGAGTaGTTGACACACACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: VTCLWGSGYQGLDPVQVQLSKME*LTHTAG
Trigger: ACCAGCTGTGTGTGTCAATCACTCCATTTTGCTCAG...CTGTACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCGTGCTACTCCCTTCATaGCAGAACCCAATTCTTTTC +
Preference number: 2 (lower is better)
Translates to: APRLVDAPLECSNLLLFAVLLPS*QNPILF
Trigger: GAAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCAC...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR GCA 90 bp TCTGTGCAGGTCAACTGCCCAGGGAGACACAGGAATCCACAAACATTTAGATTAGGTGCCCACAAAAGGTaGTACTCCCTTCATGACAGA +
Preference number: 2 (lower is better)
Translates to: SVQVNCPGRHRNPQTFRLGAHKR*YSLHDR
Trigger: TCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACC...TAATCTAAATGTTTGTGGATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACCTGGTAGCAATAAGATaGCTTCCGCCACAGGCACTG +
Preference number: 2 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHLVAIR*LPPQAL
Trigger: CAGTGCCTGTGGCGGAAGCCATCTTATTGCTACCAG...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp CTTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTCTGGTAGCAATAAGATaGCTTCCGCCACAGGCACTG +
Preference number: 2 (lower is better)
Translates to: LTVNVTCLWGSGYQGLDPLVAIR*LPPQAL
Trigger: CAGTGCCTGTGGCGGAAGCCATCTTATTGCTACCAG...AGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCTGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGG +
Preference number: 2 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTCSSAS*WFPHKG
Trigger: CCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCA...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR GCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCACACAGAGCATTGCTCTaGTGTGAGTCCTATGAGGAT +
Preference number: 2 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSHRALL*CESYED
Trigger: ATCCTCATAGGACTCACACCAGAGCAATGCTCTGTG...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACGGAATCTCCCCAGGGTaGAATGAATATACGGTGCTC +
Preference number: 2 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHGISPG*NEYTVL
Trigger: GAGCACCGTATATTCATTCCACCCTGGGGAGATTCC...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 2 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKSLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR CAA 90 bp TTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTaGATCCTGTACAGGTACAGAAGACAGCAATCCCTCAACAGTGCT +
Preference number: 2 (lower is better)
Translates to: LQSMLLAYGVLDIRD*ILYRYRRQQSLNSA
Trigger: AGCACTGTTGAGGGATTGCTGTCTTCTGTACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCTGAGCAAAATGGAGTaGTTGACACACACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSLSKME*LTHTAG
Trigger: ACCAGCTGTGTGTGTCAATCACTCCATTTTGCTCAG...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR GCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACACAGAGCATTGCTCTaGTGTGAGTCCTATGAGGAT +
Preference number: 2 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSHRALL*CESYED
Trigger: ATCCTCATAGGACTCACACCAGAGCAATGCTCTGTG...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 2 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSSLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 2 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHSLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CCA 90 bp GATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGAGAGACTCGGAATGCTGGCTaGGTCAGAGAAGACCCATCC +
Preference number: 2 (lower is better)
Translates to: DLSTILALPYSSPYNLGETRNAG*VREDPS
Trigger: GGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGT...CTCTCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATAGTGCAACACACCTCATaGAAGCCTCCCACATATGTG +
Preference number: 2 (lower is better)
Translates to: LNPLYTVTKSPRVKTATIVQHTS*KPPTYV
Trigger: CACATATGTGGGAGGCTTTCATGAGGTGTGTTGCAC...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR CAA 90 bp CCACTCCATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATaGCCCTACAGAGGTCTTACAGTCAATGTTACTTGCCTATGGGGT +
Preference number: 2 (lower is better)
Translates to: PLHYLSASVAIMIFT*PYRGLTVNVTCLWG
Trigger: ACCCCATAGGCAAGTAACATTGACTGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATGGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp CATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTCACAGGCACTGGCAGTaGTATAATTCCATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: HYLSASVAIMIFTLPYRGHRHWQ*YNSIKS
Trigger: GCTCTTGATGGAATTATATCACTGCCAGTGCCTGTG...ACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp GTCATCCCCACTCCATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTCTGAGCAAAATGGAGTaGTTGACACACACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: VIPTPLSQCFCSNHDFHILSKME*LTHTAG
Trigger: ACCAGCTGTGTGTGTCAATCACTCCATTTTGCTCAG...AATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATGGAGTGGGGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp TTAGATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGAGTGCTGGGGAGTACGTaGCAGTTAAGGGACCCAACT +
Preference number: 2 (lower is better)
Translates to: LDLSTILALPYSSPYNLGVLGST*QLRDPT
Trigger: AGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCAC...TCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR GCA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATAGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: LNPLYTVTKSPRVKTATIVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR TCA 90 bp TCCTTGAAAATATTCATGATTACCTGTAGGGAACAGGAAAGAAAGCACAGAAGTGTGCAACACACCTCATaGAAGCCTCCCACATATGTG +
Preference number: 2 (lower is better)
Translates to: SLKIFMITCREQERKHRSVQHTS*KPPTYV
Trigger: CACATATGTGGGAGGCTTTCATGAGGTGTGTTGCAC...ACTTCTGTGCTTTCTTTCCTGTTCCCTACAGGTAATCATGAATATTTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR GCA 90 bp CATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTGAGCTAGATCATGTTTaGTCAGAACCTAATCATGAG +
Preference number: 2 (lower is better)
Translates to: HYLSASVAIMIFTLPYRGELDHV*SEPNHE
Trigger: CTCATGATTAGGTTCTGAGCAAACATGATCTAGCTC...ACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR TCA 90 bp TTAGATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGAAAAATTGGTAAGCAATaGTGTCCACATCCACCTCAG +
Preference number: 2 (lower is better)
Translates to: LDLSTILALPYSSPYNLGKIGKQ*CPHPPQ
Trigger: CTGAGGTGGATGTGGACATCATTGCTTACCAATTTT...TCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CAA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAGGTACTCACAGAGCATaGCTCTGGTGTGAGTCCTAT +
Preference number: 3 (lower is better)
Translates to: APTMPSSLGSQEILAARPGTHRA*LWCESY
Trigger: ATAGGACTCACACCAGAGCAATGCTCTGTGAGTACC...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR TCA 72 bp AGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGCTaGGGTTCCTGTCTGTGCAGGTCAACTGCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: RRPIPGSLFCHC*GSCLCRSTAQG
Trigger: TCCCTGGGCAGTTGACCTGCACAGACAGGAACCTCAGCAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR GCA 72 bp TGCTTCCACAAGCACAGGAGATTTTCGCACCAACTATaGCCTCCTCACTGGGCTCACAGGAAATCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: CFHKHRRFSHQL*PPHWAHRKSWQ
Trigger: CTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAAAATCTCCTGTGCTTGTGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR CCA 72 bp ATGTCCACATCCACCTCAGTCACTCGGAATGCTGGCTaGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: MSTSTSVTRNAG*VREDPSLDLSS
Trigger: AGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGTGACTGAGGTGGATGTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CAA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGCCAAATTTGGGCGATTaGGCAGTAAGACAAGTAAGT +
Preference number: 3 (lower is better)
Translates to: NYALLTGLTGNPGSQATKPNLGD*AVRQVS
Trigger: ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGG...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CAA 90 bp TGCACTCCCATCCCACACCATCATAACTGCACCGAGACTTGTGGATGCCCCTCTCCAAATTTGGGCGATTaGGCAGTAAGACAAGTAAGT +
Preference number: 3 (lower is better)
Translates to: CTPIPHHHNCTETCGCPSPNLGD*AVRQVS
Trigger: ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGG...AGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGATGGGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR TCA 72 bp GAAGACAGCAATCCCTCAACAGTGCTGGGGAGTACGTaGCAGTTAAGGGACCCAACTTATGTTGCTTCCACA +
Preference number: 3 (lower is better)
Translates to: EDSNPSTVLGST*QLRDPTYVAST
Trigger: TGTGGAAGCAACATAAGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCACTGTTGAGGGATTGCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR TCA 72 bp CAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGGTACTCACAGAGCATT +
Preference number: 3 (lower is better)
Translates to: QGGMNIRCSSAS*WFPHKGYSQSI
Trigger: AATGCTCTGTGAGTACCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCACCGTATATTCATTCCACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR TCA 72 bp TATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATaGATATACGGTGCTCATCTGCTAGCTGATGGTTCC +
Preference number: 3 (lower is better)
Translates to: YVVLIRNLPRVE*IYGAHLLADGS
Trigger: GGAACCATCAGCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR GCA 72 bp GAATTTCTATGCACTCCCATCCCACACCATCATAACTaGACCGAGACTTGTGGATGCCCCTCTAGAATGTTC +
Preference number: 3 (lower is better)
Translates to: EFLCTPIPHHHN*TETCGCPSRMF
Trigger: GAACATTCTAGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGATGGGAGTGCATAGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR TCA 72 bp AGCCCTGCCTCAATGTTGGTAAAAATTGGTAAGCAATaGTGTCCACATCCACCTCAGTCACTCGGAATGCTG +
Preference number: 3 (lower is better)
Translates to: SPASMLVKIGKQ*CPHPPQSLGML
Trigger: CAGCATTCCGAGTGACTGAGGTGGATGTGGACATCATTGCTTACCAATTTTTACCAACATTGAGGCAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR GCA 72 bp ATCCCACACCATCATAACTGCACCGAGACTTGTGGATaGCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGC +
Preference number: 3 (lower is better)
Translates to: IPHHHNCTETCG*PSRMFESPFVC
Trigger: GCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CAA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCGGTACTCACAGAGCATaGCTCTGGTGTGAGTCCTAT +
Preference number: 3 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTGTHRA*LWCESY
Trigger: ATAGGACTCACACCAGAGCAATGCTCTGTGAGTACC...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CAA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCTAGCTCAGGTCCTTTaGGTGAGAGCTAGATCATGT +
Preference number: 3 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSLAQVL*VRARSC
Trigger: ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAG...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CAA 90 bp CATCATAACTGCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTACAGTCAATGTTACTaGCCTATGGGGTTCTGGATA +
Preference number: 3 (lower is better)
Translates to: HHNCTETCGCPSRMFESPYSQCY*PMGFWI
Trigger: TATCCAGAACCCCATAGGCAAGTAACATTGACTGTA...AGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR GCA 72 bp ACATTGCCCTACAGAGGTCTTACAGTCAATGTTACTTaGCTATGGGGTTCTGGATATCAGGGACTTGATCCT +
Preference number: 3 (lower is better)
Translates to: TLPYRGLTVNVT*LWGSGYQGLDP
Trigger: AGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAGACCTCTGTAGGGCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CAA 90 bp GTCATCCCCACTCCATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGGTACTCACAGAGCATaGCTCTGGTGTGAGTCCTAT +
Preference number: 3 (lower is better)
Translates to: VIPTPLSQCFCSNHDFHIGTHRA*LWCESY
Trigger: ATAGGACTCACACCAGAGCAATGCTCTGTGAGTACC...AATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATGGAGTGGGGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR-3UTR CAA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATAGGTACTCACAGAGCATaGCTCTGGTGTGAGTCCTAT +
Preference number: 3 (lower is better)
Translates to: LNPLYTVTKSPRVKTATIGTHRA*LWCESY
Trigger: ATAGGACTCACACCAGAGCAATGCTCTGTGAGTACC...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR-3UTR CAA 90 bp GATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGAGAGCGAATCTCCTTTTGTTaGCCACAGTCATCCCCACTC +
Preference number: 3 (lower is better)
Translates to: DLSTILALPYSSPYNLGERISFC*PQSSPL
Trigger: GAGTGGGGATGACTGTGGCAAACAAAAGGAGATTCG...CTCTCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR GCA 72 bp ACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTaGCACAATAGGCCCTTATCACTGTATAAATCAGAG +
Preference number: 3 (lower is better)
Translates to: TLHSNKIPKSKD*HNRPLSLYKSE
Trigger: CTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAACAGTCTGTGCCCTGTaGGCTCAGCCGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPTVCAL*AQPKPH
Trigger: GTGGGGTTTCGGCTGAGCCCACAGGGCACAGACTGT...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAACAGCTCTTCACAAATaGGGCCCCTCCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPTALHK*GPSIIP
Trigger: GGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGT...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAGTGCTGGGGAGTACGTaGCAGTTAAGGGACCCAACT +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPVLGST*QLRDPT
Trigger: AGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCAC...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAATCTGCCCCCTCCAACTaGGCAACTGCATGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKSAPSN*ATAWDW
Trigger: CCAGTCCCATGCAGTTGCGCAGTTGGAGGGGGCAGA...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS-3UTR TCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGCCATGAGAAGCGGATaGACAGTCTGTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKAMRSG*TVCALW
Trigger: CCACAGGGCACAGACTGTTCATCCGCTTCTCATGGC...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACTGACTCAGCAGTCCTaGCCTGTGACACTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPLTQQS*PVTLLL
Trigger: TAGAAGGAGTGTCACAGGTCAGGACTGCTGAGTCAG...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAGGCCTTGCCCCGGTATaGATTCTCCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPGLAPV*ILQCSI
Trigger: TATTGAGCACTGGAGAATTCATACCGGGGCAAGGCC...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAAC +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKHQHRR*HEKRMN
Trigger: GTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATG...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGGCACCCAAGGTTTTCTaGCCCCTCCAACTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKAPKVF*PLQLRN
Trigger: GTTGCGCAGTTGGAGGGGGCAGAAAACCTTGGGTGC...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS-3UTR CCA 90 bp TTCGCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGAGTCACTCGGAATGCTaGCTGGGTCAGAGAAGACCC +
Preference number: 4 (lower is better)
Translates to: FAPTMPSSLGSQEILAARSHSEC*LGQRRP
Trigger: GGGTCTTCTCTGACCCAGCCAGCATTCCGAGTGACT...CCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCATTTCTGGAAAAGACCTaGCTCAGCAGTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPFLEKT*LSSPDL
Trigger: CAGGTCAGGACTGCTGAGTCAGGTCTTTTCCAGAAA...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp TTCGCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCTCCCCAGGGTGGAATaGATATACGGTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: FAPTMPSSLGSQEILAARLPRVE*IYGAHL
Trigger: CAGATGAGCACCGTATATTCATTCCACCCTGGGGAG...CCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGGTCTCACCTCAGCATaGGTCATCTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKGLTSA*VIWLSR
Trigger: TCTTGACAGCCAGATGACTCATGCTGAGGTGAGACC...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAGTGGGAAAGACTCCATaGATTCAGTCCTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPVGKTP*IQSFCM
Trigger: CATGCAGAAGGACTGAATGCATGGAGTCTTTCCCAC...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAACTCAGTCACTCGGAATaGTGGCTGGGTCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKLSHSE*WLGQRR
Trigger: TCTTCTCTGACCCAGCCAGCATTCCGAGTGACTGAG...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGCTGGTAGCAATAAGATaGCTTCCGCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKLVAIR*LPPQAL
Trigger: CAGTGCCTGTGGCGGAAGCCATCTTATTGCTACCAG...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGCTCCCCAGGGTGGAATaGATATACGGTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GMLAGSEKTHPWISLLSLLPRVE*IYGAHL
Trigger: CAGATGAGCACCGTATATTCATTCCACCCTGGGGAG...CAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCATGCATTCAGTCCTTCTaGATGGACTCACCCTATTGT +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPCIQSF*MDSPYC
Trigger: ACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCA...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGGGCCACCAAAACTGTTaGACTCGTGAGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKGHQNC*TRELFL
Trigger: GAGAAAGAGCTCACGAGTGCAACAGTTTTGGTGGCC...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGTAGCTGCTCCCTCATaGTCACAGTCTGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKVAAPS*SQSVLN
Trigger: GTTGAGAACAGACTGTGAGCATGAGGGAGCAGCTAC...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598744.1
CDS-3UTR CCA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCAGTCACACATCTCACATaGGTGTGCTTTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: APTMPSSLGSQEILAARPVTHLT*VCFLEK
Trigger: CTTTTCCAGAAAGCACACCCATGTGAGATGTGTGAC...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGAGACTGGAGCTGTGTaGGAAAGACTCCATGCATTC +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKETGAV*ERLHAF
Trigger: GAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTC...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCGCCATGAGAAGCGGATaGACAGTCTGTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASAMRSG*TVCALW
Trigger: CCACAGGGCACAGACTGTTCATCCGCTTCTCATGGC...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCCTCCTTGGTGTTGCCTaGGACTGGAGCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: APRLVDAPLECSNLLLFALLGVA*DWSCVG
Trigger: TCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAG...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp TTCGCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCTTCATCACCGCAACTaGAAAGCATCTGTCCATCAT +
Preference number: 4 (lower is better)
Translates to: FAPTMPSSLGSQEILAARLHHRN*KASVHH
Trigger: ATGATGGACAGATGCTTTTCAGTTGCGGTGATGAAG...CCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAACACAGGCACTGGCAGTaGTATAATTCCATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKHRHWQ*YNSIKS
Trigger: GCTCTTGATGGAATTATATCACTGCCAGTGCCTGTG...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAATTAGATTATTTCCTCTaGCAGTGGCCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKLDYFL*QWPWPQ
Trigger: CTGTGGCCAAGGCCACTGTCAGAGGAAATAATCTAA...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCCGGATGAACAGTCTGTaGCCTGTGGGCTCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASRMNSL*PVGSAE
Trigger: TTCGGCTGAGCCCACAGGGCACAGACTGTTCATCCG...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGGGCCACCAAAACTGTTaGACTCGTGAGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GMLAGSEKTHPWISLLSLGHQNC*TRELFL
Trigger: GAGAAAGAGCTCACGAGTGCAACAGTTTTGGTGGCC...CAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGCCACACCATCATAACTaGACCGAGACTTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: GMLAGSEKTHPWISLLSLPHHHN*TETCGC
Trigger: GCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGG...CAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKSLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTACAGCTCTTCACAAATaGGGCCCCTCCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGTALHK*GPSIIP
Trigger: GGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGT...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGCTCCTTGGTGTTGCCTaGGACTGGAGCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLLLGVA*DWSCVG
Trigger: TCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAG...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp TGCACTCCCATCCCACACCATCATAACTGCACCGAGACTTGTGGATGCCCCTCTCACAGGCACTGGCAGTaGTATAATTCCATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: CTPIPHHHNCTETCGCPSHRHWQ*YNSIKS
Trigger: GCTCTTGATGGAATTATATCACTGCCAGTGCCTGTG...AGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGATGGGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGTGCTACTCCCTTCATaGCAGAACCCAATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKVLLPS*QNPILF
Trigger: GAAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCAC...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGTACAATTTAGGAGAGTaGGCCCTGCCTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: GMLAGSEKTHPWISLLSLYNLGE*ALPQCW
Trigger: CCAACATTGAGGCAGGGCTCACTCTCCTAAATTGTA...CAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGTGCATTCAGTCCTTCTaGATGGACTCACCCTATTGT +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKCIQSF*MDSPYC
Trigger: ACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCA...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGCACAGAGCATTGCTCTaGTGTGAGTCCTATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GMLAGSEKTHPWISLLSLHRALL*CESYED
Trigger: ATCCTCATAGGACTCACACCAGAGCAATGCTCTGTG...CAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCAGTCACTCGGAATGCTaGCTGGGTCAGAGAAGACCC +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASSHSEC*LGQRRP
Trigger: GGGTCTTCTCTGACCCAGCCAGCATTCCGAGTGACT...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTCTCCTTGGTGTTGCCTaGGACTGGAGCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFLLGVA*DWSCVG
Trigger: TCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAG...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCGGTCTCACCTCAGCATaGGTCATCTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASGLTSA*VIWLSR
Trigger: TCTTGACAGCCAGATGACTCATGCTGAGGTGAGACC...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTTGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGCSSAS*WFPHKG
Trigger: CCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCA...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGTGGATATCAGGGACTTaGTCCTGTACAGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: GMLAGSEKTHPWISLLSLWISGT*SCTGTE
Trigger: TTCTGTACCTGTACAGGATCAAGTCCCTGATATCCA...CAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp ACTCGGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCTGGATATCAGGGACTTaGTCCTGTACAGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: TRNAGWVREDPSLDLSSVWISGT*SCTGTE
Trigger: TTCTGTACCTGTACAGGATCAAGTCCCTGATATCCA...GACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp GTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGTACAGCTCTTCTGTCACTGCTaGGGTTCCTGTCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VTCLWGSGYQGLDPVQVQLFCHC*GSCLCR
Trigger: CCTGCACAGACAGGAACCTCAGCAGTGACAGAAGAG...CTGTACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGCTCTTCTGTCACTGCTaGGGTTCCTGTCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLLFCHC*GSCLCR
Trigger: CCTGCACAGACAGGAACCTCAGCAGTGACAGAAGAG...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAATTGTGTTGGATATCTTaGCTGTGGTGGTTTCATAGG +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKLCWIS*LWWFHR
Trigger: CCTATGAAACCACCACAGTCAAGATATCCAACACAA...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTCGGATGAACAGTCTGTaGCCTGTGGGCTCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFRMNSL*PVGSAE
Trigger: TTCGGCTGAGCCCACAGGGCACAGACTGTTCATCCG...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAAC +
Preference number: 4 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRHQHRR*HEKRMN
Trigger: GTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATG...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp GGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GTSSSKFGRFGSKTSKSQHQHRR*HEKRMN
Trigger: GTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATG...CTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp TTCGCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGGTGCTGGTAAAAGTTTaGACTGAACGAGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: FAPTMPSSLGSQEILAARVLVKV*TERESS
Trigger: AGAAGATTCTCGTTCAGTGCAAACTTTTACCAGCAC...CCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTCTGGTAGCAATAAGATaGCTTCCGCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGLVAIR*LPPQAL
Trigger: CAGTGCCTGTGGCGGAAGCCATCTTATTGCTACCAG...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAGCCATGAGAAGCGGATaGACAGTCTGTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSAMRSG*TVCALW
Trigger: CCACAGGGCACAGACTGTTCATCCGCTTCTCATGGC...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTTCTGGAAAAGACCTaGCTCAGCAGTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCFLEKT*LSSPDL
Trigger: CAGGTCAGGACTGCTGAGTCAGGTCTTTTCCAGAAA...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTACAGCTCTTCACAAATaGGGCCCCTCCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFTALHK*GPSIIP
Trigger: GGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGT...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTGGGCCTTGCCCCGGTATaGATTCTCCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: KSQQTLAQVLLVRARSCLGLAPV*ILQCSI
Trigger: TATTGAGCACTGGAGAATTCATACCGGGGCAAGGCC...CAAACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGCTTGCTGTTGCTTGTaGATTGTGGAAAACAAGATA +
Preference number: 4 (lower is better)
Translates to: QLCPPHWAHRKSWQPGHKACCCL*IVENKI
Trigger: TATCTTGTTTTCCACAATTCACAAGCAACAGCAAGC...TTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTAGTCTGTTCTCAACCTaGACCCGGTCCATCAGCACC +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFSLFST*TRSIST
Trigger: GGTGCTGATGGACCGGGTTCAGGTTGAGAACAGACT...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598744.1
CDS-3UTR GCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAAC +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHHQHRR*HEKRMN
Trigger: GTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATG...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTCCTTCCCACATTTGCTaGACACGTAGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGPSHIC*TRRILL
Trigger: GAGCAAGATCCTACGTGTGCAGCAAATGTGGGAAGG...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTGGCCACCAAAACTGTTaGACTCGTGAGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCGHQNC*TRELFL
Trigger: GAGAAAGAGCTCACGAGTGCAACAGTTTTGGTGGCC...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCGGTGCCCACAAAAGGTaGTACTCCCTTCATGACAGA +
Preference number: 4 (lower is better)
Translates to: APRLVDAPLECSNLLLFAGAHKR*YSLHDR
Trigger: TCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACC...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCGGCTGCAGTGATGTCTaGCCTGTCAGGCACCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTGCSDV*PVRHPR
Trigger: CCTTGGGTGCCTGACAGGGCAGACATCACTGCAGCC...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS-3UTR CCA 90 bp CTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTCTTACAACAGTCTGTGCCCTGTaGGCTCAGCCGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: LSASVAIMIFTLPYRGLTTVCAL*AQPKPH
Trigger: GTGGGGTTTCGGCTGAGCCCACAGGGCACAGACTGT...TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp ACTCGGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCTTCAGTCCTTCTGCATaGACTCACCCTATTGTAAGT +
Preference number: 4 (lower is better)
Translates to: TRNAGWVREDPSLDLSSVFSPSA*THPIVS
Trigger: ACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAA...GACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCGAGACTGGAGCTGTGTaGGAAAGACTCCATGCATTC +
Preference number: 4 (lower is better)
Translates to: APRLVDAPLECSNLLLFAETGAV*ERLHAF
Trigger: GAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTC...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCGGAATCTCCCCAGGGTaGAATGAATATACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASGISPG*NEYTVL
Trigger: GAGCACCGTATATTCATTCCACCCTGGGGAGATTCC...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGGAATCTCCCCAGGGTaGAATGAATATACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGGISPG*NEYTVL
Trigger: GAGCACCGTATATTCATTCCACCCTGGGGAGATTCC...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp CATCATAACTGCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTCTGGTAGCAATAAGATaGCTTCCGCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: HHNCTETCGCPSRMFESPLVAIR*LPPQAL
Trigger: CAGTGCCTGTGGCGGAAGCCATCTTATTGCTACCAG...AGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp TCTGTGCAGGTCAACTGCCCAGGGAGACACAGGAATCCACAAACATTTAGATTAACTCGGAATGCTGGCTaGGTCAGAGAAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: SVQVNCPGRHRNPQTFRLTRNAG*VREDPS
Trigger: GGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGT...TAATCTAAATGTTTGTGGATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp GTCATCCCCACTCCATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCACCGCCGCTGCCATaGGAAGCGGATGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: VIPTPLSQCFCSNHDFHIAPPLP*EADEQS
Trigger: AGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGC...AATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATGGAGTGGGGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTCTGACTCAGCAGTCCTaGCCTGTGACACTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFLTQQS*PVTLLL
Trigger: TAGAAGGAGTGTCACAGGTCAGGACTGCTGAGTCAG...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTACAGCTCTTCACAAATaGGGCCCCTCCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSTALHK*GPSIIP
Trigger: GGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGT...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGCTCCCCAGGGTGGAATaGATATACGGTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKLPRVE*IYGAHL
Trigger: CAGATGAGCACCGTATATTCATTCCACCCTGGGGAG...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTGGTGCAACACACCTCATaGAAGCCTCCCACATATGTG +
Preference number: 4 (lower is better)
Translates to: KSQQTLAQVLLVRARSCLVQHTS*KPPTYV
Trigger: CACATATGTGGGAGGCTTTCATGAGGTGTGTTGCAC...CAAACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCCTGAGCAAAATGGAGTaGTTGACACACACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASLSKME*LTHTAG
Trigger: ACCAGCTGTGTGTGTCAATCACTCCATTTTGCTCAG...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTCTGAGCAAAATGGAGTaGTTGACACACACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCLSKME*LTHTAG
Trigger: ACCAGCTGTGTGTGTCAATCACTCCATTTTGCTCAG...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGGTAATAGCCAAAAACTaGAAGTTACCCAAACATCCA +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKVIAKN*KLPKHP
Trigger: TGGATGTTTGGGTAACTTTCAGTTTTTGGCTATTAC...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGCGCGAAGGAAGGTCCTaGAGTCTTCACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLREGRS*SLHCLS
Trigger: AGAAAGACAGTGAAGACTGCAGGACCTTCCTTCGCG...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGTGGGAAAGACTCCATaGATTCAGTCCTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGVGKTP*IQSFCM
Trigger: CATGCAGAAGGACTGAATGCATGGAGTCTTTCCCAC...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTTCTGTGCAGGTCAACTaGCCAGGGAGACACAGGAAT +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFSVQVN*PGRHRN
Trigger: ATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCSLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTAACTGCGCAACTGCATaGGACTGGGAAAATGAAAGC +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGNCATA*DWENES
Trigger: GCTTTCATTTTCCCAGTCCCATGCAGTTGCGCAGTT...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS-3UTR TCA 90 bp CATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTGCCATGAGAAGCGGATaGACAGTCTGTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HYLSASVAIMIFTLPYRGAMRSG*TVCALW
Trigger: CCACAGGGCACAGACTGTTCATCCGCTTCTCATGGC...ACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp CTTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTCTGACTCAGCAGTCCTaGCCTGTGACACTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LTVNVTCLWGSGYQGLDPLTQQS*PVTLLL
Trigger: TAGAAGGAGTGTCACAGGTCAGGACTGCTGAGTCAG...AGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACCTGACTCAGCAGTCCTaGCCTGTGACACTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHLTQQS*PVTLLL
Trigger: TAGAAGGAGTGTCACAGGTCAGGACTGCTGAGTCAG...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGTTTCTGGAAAAGACCTaGCTCAGCAGTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: GTSSSKFGRFGSKTSKSQFLEKT*LSSPDL
Trigger: CAGGTCAGGACTGCTGAGTCAGGTCTTTTCCAGAAA...CTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGAGTAAAGACTGCCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATCTCCTTGGTGTTGCCTaGGACTGGAGCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KSKDCHNRPLSLYKSEQHLLGVA*DWSCVG
Trigger: TCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAG...ATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTCTTCATCACCGCAACTaGAAAGCATCTGTCCATCAT +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGLHHRN*KASVHH
Trigger: ATGATGGACAGATGCTTTTCAGTTGCGGTGATGAAG...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACGGCCTTGCCCCGGTATaGATTCTCCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHGLAPV*ILQCSI
Trigger: TATTGAGCACTGGAGAATTCATACCGGGGCAAGGCC...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAGGCCTTGCCCCGGTATaGATTCTCCAGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSGLAPV*ILQCSI
Trigger: TATTGAGCACTGGAGAATTCATACCGGGGCAAGGCC...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CTACAGAGGTCTTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGGTGCAACACACCTCATaGAAGCCTCCCACATATGTG +
Preference number: 4 (lower is better)
Translates to: LQRSYSQCYLPMGFWISGVQHTS*KPPTYV
Trigger: CACATATGTGGGAGGCTTTCATGAGGTGTGTTGCAC...CCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAGACCTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp GTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGTACAGGCAAAATGGAGTGATTaGCACACACAGCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VTCLWGSGYQGLDPVQVQAKWSD*HTQLVA
Trigger: TGCTACCAGCTGTGTGTGTCAATCACTCCATTTTGC...CTGTACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp CTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTCTTACAGTGCTGGGGAGTACGTaGCAGTTAAGGGACCCAACT +
Preference number: 4 (lower is better)
Translates to: LSASVAIMIFTLPYRGLTVLGST*QLRDPT
Trigger: AGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCAC...TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGCGCGAAGGAAGGTCCTaGAGTCTTCACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKREGRS*SLHCLS
Trigger: AGAAAGACAGTGAAGACTGCAGGACCTTCCTTCGCG...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTGGTGGGAAAGACTCCATaGATTCAGTCCTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: KSQQTLAQVLLVRARSCLVGKTP*IQSFCM
Trigger: CATGCAGAAGGACTGAATGCATGGAGTCTTTCCCAC...CAAACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp TCTGTGCAGGTCAACTGCCCAGGGAGACACAGGAATCCACAAACATTTAGATTACCTTCCCACATTTGCTaGACACGTAGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SVQVNCPGRHRNPQTFRLPSHIC*TRRILL
Trigger: GAGCAAGATCCTACGTGTGCAGCAAATGTGGGAAGG...TAATCTAAATGTTTGTGGATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGCCTTCCCACATTTGCTaGACACGTAGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKPSHIC*TRRILL
Trigger: GAGCAAGATCCTACGTGTGCAGCAAATGTGGGAAGG...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCCCCAAGAGTAAAGACTaGCACAATAGGCCCTTATCA +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASPKSKD*HNRPLS
Trigger: TGATAAGGGCCTATTGTGGCAGTCTTTACTCTTGGG...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp CTACAGAGGTCTTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGGGTGCCCACAAAAGGTaGTACTCCCTTCATGACAGA +
Preference number: 4 (lower is better)
Translates to: LQRSYSQCYLPMGFWISGGAHKR*YSLHDR
Trigger: TCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACC...CCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAGACCTCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGGGTGCCCACAAAAGGTaGTACTCCCTTCATGACAGA +
Preference number: 4 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKGAHKR*YSLHDR
Trigger: TCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACC...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGACCGAGACTTGTGGATaGCCCTCTAGAATGTTCGAA +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLTETCG*PSRMFE
Trigger: TTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGT...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp TCTGTGCAGGTCAACTGCCCAGGGAGACACAGGAATCCACAAACATTTAGATTACCACACCATCATAACTaGACCGAGACTTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: SVQVNCPGRHRNPQTFRLPHHHN*TETCGC
Trigger: GCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGG...TAATCTAAATGTTTGTGGATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACCTCCTTTACTGTGGCTaGAGTGATGTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHLLYCG*SDVCPV
Trigger: GACAGGGCAGACATCACTGCAGCCACAGTAAAGGAG...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS-3UTR CCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTCCACGACAGGGGTCATaGATTGTAACAAAAGCGCGA +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFPRQGS*IVTKAR
Trigger: TCGCGCTTTTGTTACAATCCATGACCCCTGTCGTGG...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000282286.6
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCGATCTCCCTAACATGTaGACTGTACAGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASDLPNM*TVQLFT
Trigger: TGTGAAGAGCTGTACAGTCCACATGTTAGGGAGATC...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGATCTCCCTAACATGTaGACTGTACAGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGDLPNM*TVQLFT
Trigger: TGTGAAGAGCTGTACAGTCCACATGTTAGGGAGATC...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGCACAGAGCATTGCTCTaGTGTGAGTCCTATGAGGAT +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLHRALL*CESYED
Trigger: ATCCTCATAGGACTCACACCAGAGCAATGCTCTGTG...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGGGAATCTCCCCAGGGTaGAATGAATATACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKGISPG*NEYTVL
Trigger: GAGCACCGTATATTCATTCCACCCTGGGGAGATTCC...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp AACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACAAAGATCTGTCAACTATTTTaGCTTTACCATATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NYALLTGLTGNPGSQATKICQLF*LYHIPL
Trigger: GAGAGGAATATGGTAAAGCCAAAATAGTTGACAGAT...CTTTGTGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCGGTAAAAGTTTGCACTaGACGAGAATCTTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: AYQESPQGGMNIRCSSASGKSLH*TRIFSY
Trigger: GTAGGAGAAGATTCTCGTTCAGTGCAAACTTTTACC...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCGGTCTCACCTCAGCATaGGTCATCTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTGLTSA*VIWLSR
Trigger: TCTTGACAGCCAGATGACTCATGCTGAGGTGAGACC...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCACACAGGCACTGGCAGTaGTATAATTCCATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSHRHWQ*YNSIKS
Trigger: GCTCTTGATGGAATTATATCACTGCCAGTGCCTGTG...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGGCAAAATGGAGTGATTaGCACACACAGCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GTSSSKFGRFGSKTSKSQAKWSD*HTQLVA
Trigger: TGCTACCAGCTGTGTGTGTCAATCACTCCATTTTGC...CTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGCTACTCCCTTCATaGCAGAACCCAATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLVLLPS*QNPILF
Trigger: GAAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCAC...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATACAATTTAGGAGAGTaGGCCCTGCCTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSYNLGE*ALPQCW
Trigger: CCAACATTGAGGCAGGGCTCACTCTCCTAAATTGTA...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGTGCATTCAGTCCTTCTaGATGGACTCACCCTATTGT +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLCIQSF*MDSPYC
Trigger: ACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCA...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACGGCCACCAAAACTGTTaGACTCGTGAGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHGHQNC*TRELFL
Trigger: GAGAAAGAGCTCACGAGTGCAACAGTTTTGGTGGCC...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCAGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 4 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp CTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTCTTACATTTTCGCACCAACTATaGCCTCCTCACTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSASVAIMIFTLPYRGLTFSHQL*PPHWAH
Trigger: GTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAAAA...TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTGAATCTCCTTTTGTTTaGCACAGTCATCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFESPFV*HSHPHS
Trigger: GGAGTGGGGATGACTGTGGCAAACAAAAGGAGATTC...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTCTTACACTCAGTCACTCGGAATaGTGGCTGGGTCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSASVAIMIFTLPYRGLTLSHSE*WLGQRR
Trigger: TCTTCTCTGACCCAGCCAGCATTCCGAGTGACTGAG...TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACCACGACAGGGGTCATaGATTGTAACAAAAGCGCGA +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSPRQGS*IVTKAR
Trigger: TCGCGCTTTTGTTACAATCCATGACCCCTGTCGTGG...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282286.6
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCTTCAGTCCTTCTGCATaGACTCACCCTATTGTAAGT +
Preference number: 4 (lower is better)
Translates to: APRLVDAPLECSNLLLFAFSPSA*THPIVS
Trigger: ACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAA...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTCAGTCCTTCTGCATaGACTCACCCTATTGTAAGT +
Preference number: 4 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCFSPSA*THPIVS
Trigger: ACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAA...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACGAGACTGGAGCTGTGTaGGAAAGACTCCATGCATTC +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHETGAV*ERLHAF
Trigger: GAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTC...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp CTACAGAGGTCTTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: LQRSYSQCYLPMGFWISGSLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...CCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAGACCTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATAACTCGGAATGCTGGCTaGGTCAGAGAAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: LNPLYTVTKSPRVKTATITRNAG*VREDPS
Trigger: GGATGGGTCTTCTCTGACCCAGCCAGCATTCCGAGT...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTGGACAAGAGGACGTGTaGATTGTAACAAAAGCGCGA +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFGQEDV*IVTKAR
Trigger: TCGCGCTTTTGTTACAATCCACACGTCCTCTTGTCC...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391705.7
CDS-3UTR TCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGGTAAAAGTTTGCACTaGACGAGAATCTTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLGKSLH*TRIFSY
Trigger: GTAGGAGAAGATTCTCGTTCAGTGCAAACTTTTACC...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGAGTAAAGACTGCCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATGGTCTCACCTCAGCATaGGTCATCTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KSKDCHNRPLSLYKSEQHGLTSA*VIWLSR
Trigger: TCTTGACAGCCAGATGACTCATGCTGAGGTGAGACC...ATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGAGTAAAGACTGCCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATTGCTCATCTGCTAGCTaGTGGTTCCCTCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: KSKDCHNRPLSLYKSEQHCSSAS*WFPHKG
Trigger: CCCTTTGTGAGGGAACCATCAGCTAGCAGATGAGCA...ATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGAGTAAAGACTGCCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATCTCCCCAGGGTGGAATaGATATACGGTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: KSKDCHNRPLSLYKSEQHLPRVE*IYGAHL
Trigger: CAGATGAGCACCGTATATTCATTCCACCCTGGGGAG...ATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAGCAAAATGGAGTGATTaGCACACACAGCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSAKWSD*HTQLVA
Trigger: TGCTACCAGCTGTGTGTGTCAATCACTCCATTTTGC...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACCTGAGCAAAATGGAGTaGTTGACACACACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHLSKME*LTHTAG
Trigger: ACCAGCTGTGTGTGTCAATCACTCCATTTTGCTCAG...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCATTAGATTATTTCCTCTaGCAGTGGCCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSLDYFL*QWPWPQ
Trigger: CTGTGGCCAAGGCCACTGTCAGAGGAAATAATCTAA...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp GTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGTACAGGGTGTACACACATGCTaGAACAGCACATTTTACACT +
Preference number: 4 (lower is better)
Translates to: VTCLWGSGYQGLDPVQVQGVHTC*NSTFYT
Trigger: AGTGTAAAATGTGCTGTTTCAGCATGTGTGTACACC...CTGTACCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp CATCATAACTGCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTGTGTTGGATATCTTaGCTGTGGTGGTTTCATAGG +
Preference number: 4 (lower is better)
Translates to: HHNCTETCGCPSRMFESPLCWIS*LWWFHR
Trigger: CCTATGAAACCACCACAGTCAAGATATCCAACACAA...AGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGTGCTGGTAAAAGTTTaGACTGAACGAGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGVLVKV*TERESS
Trigger: AGAAGATTCTCGTTCAGTGCAAACTTTTACCAGCAC...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTGCATTCAGTCCTTCTaGATGGACTCACCCTATTGT +
Preference number: 4 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKCIQSF*MDSPYC
Trigger: ACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCA...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCACCCAAGAGTAAAGACTaGCACAATAGGCCCTTATCA +
Preference number: 4 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSPKSKD*HNRPLS
Trigger: TGATAAGGGCCTATTGTGGCAGTCTTTACTCTTGGG...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp TCTGTGCAGGTCAACTGCCCAGGGAGACACAGGAATCCACAAACATTTAGATTACCCAAGAGTAAAGACTaGCACAATAGGCCCTTATCA +
Preference number: 4 (lower is better)
Translates to: SVQVNCPGRHRNPQTFRLPKSKD*HNRPLS
Trigger: TGATAAGGGCCTATTGTGGCAGTCTTTACTCTTGGG...TAATCTAAATGTTTGTGGATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCGGTGCCCACAAAAGGTaGTACTCCCTTCATGACAGA +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTGAHKR*YSLHDR
Trigger: TCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACC...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp CATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTGCAATCCCTCAACAGTaGTGGGGAGTACGTGACAGT +
Preference number: 4 (lower is better)
Translates to: HYLSASVAIMIFTLPYRGAIPQQ*WGVRDS
Trigger: ACTGTCACGTACTCCCCAGCACTGTTGAGGGATTGC...ACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAACCGAGACTTGTGGATaGCCCTCTAGAATGTTCGAA +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSTETCG*PSRMFE
Trigger: TTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGT...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp CTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTCTTACACCACGACAGGGGTCATaGATTGTAACAAAAGCGCGA +
Preference number: 4 (lower is better)
Translates to: LSASVAIMIFTLPYRGLTPRQGS*IVTKAR
Trigger: TCGCGCTTTTGTTACAATCCATGACCCCTGTCGTGG...TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282286.6
CDS-3UTR CCA 90 bp GGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGGTCACACATCTCACATaGGTGTGCTTTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GTSSSKFGRFGSKTSKSQVTHLT*VCFLEK
Trigger: CTTTTCCAGAAAGCACACCCATGTGAGATGTGTGAC...CTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGGTCACACATCTCACATaGGTGTGCTTTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRVTHLT*VCFLEK
Trigger: CTTTTCCAGAAAGCACACCCATGTGAGATGTGTGAC...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGTTCAGTCCTTCTGCATaGACTCACCCTATTGTAAGT +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLFSPSA*THPIVS
Trigger: ACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAA...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCGAGACTGGAGCTGTGTaGGAAAGACTCCATGCATTC +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTETGAV*ERLHAF
Trigger: GAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTC...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGAGCATTGCTCTaGTGTGAGTCCTATGAGGAT +
Preference number: 4 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSHRALL*CESYED
Trigger: ATCCTCATAGGACTCACACCAGAGCAATGCTCTGTG...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp AAGAGTAAAGACTGCCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATCTGGTAGCAATAAGATaGCTTCCGCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KSKDCHNRPLSLYKSEQHLVAIR*LPPQAL
Trigger: CAGTGCCTGTGGCGGAAGCCATCTTATTGCTACCAG...ATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR CAA 72 bp AGCAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTaGGCAGTAAGACAAGTAAGTCACAGCTATCACGTT +
Preference number: 4 (lower is better)
Translates to: SSMGQAVPNLGD*AVRQVSHSYHV
Trigger: AACGTGATAGCTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCAGGTAAAAGTTTGCACTaGACGAGAATCTTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSGKSLH*TRIFSY
Trigger: GTAGGAGAAGATTCTCGTTCAGTGCAAACTTTTACC...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGAGTAAAGACTGCCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATGTGCAACACACCTCATaGAAGCCTCCCACATATGTG +
Preference number: 4 (lower is better)
Translates to: KSKDCHNRPLSLYKSEQHVQHTS*KPPTYV
Trigger: CACATATGTGGGAGGCTTTCATGAGGTGTGTTGCAC...ATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAGTGCTACTCCCTTCATaGCAGAACCCAATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSVLLPS*QNPILF
Trigger: GAAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCAC...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTGGTGTACACACATGCTaGAACAGCACATTTTACACT +
Preference number: 4 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFGVHTC*NSTFYT
Trigger: AGTGTAAAATGTGCTGTTTCAGCATGTGTGTACACC...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATACCTTCCCACATTTGCTaGACACGTAGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LNPLYTVTKSPRVKTATIPSHIC*TRRILL
Trigger: GAGCAAGATCCTACGTGTGCAGCAAATGTGGGAAGG...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCGTACTCACAGAGCATTaGTCTGGTGTGAGTCCTATG +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTVLTEH*SGVSPM
Trigger: CATAGGACTCACACCAGAGCAATGCTCTGTGAGTAC...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AAGATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGAGCTAGATCATGTTTaGTCAGAACCTAATCATGAG +
Preference number: 4 (lower is better)
Translates to: KMENRVRKSQQTLAQVLLELDHV*SEPNHE
Trigger: CTCATGATTAGGTTCTGAGCAAACATGATCTAGCTC...CAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCCCAAGAGTAAAGACTaGCACAATAGGCCCTTATCA +
Preference number: 4 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSPKSKD*HNRPLS
Trigger: TGATAAGGGCCTATTGTGGCAGTCTTTACTCTTGGG...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGAGAGGCAATCCCTCAACAGTaGTGGGGAGTACGTGACAGT +
Preference number: 4 (lower is better)
Translates to: DLSTILALPYSSPYNLGEAIPQQ*WGVRDS
Trigger: ACTGTCACGTACTCCCCAGCACTGTTGAGGGATTGC...CTCTCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CAATCCCTCAACAGTGCTGGGGAGTACGTGACAGTTAAGGGACCCAACTTATGTACTCCATTATCTCAGTaGTTCTGTAGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: QSLNSAGEYVTVKGPNLCTPLSQ*FCSNHD
Trigger: ATCATGATTGCTACAGAAGCACTGAGATAATGGAGT...ACATAAGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCACTGTTGAGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAGTCACACATCTCACATaGGTGTGCTTTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSVTHLT*VCFLEK
Trigger: CTTTTCCAGAAAGCACACCCATGTGAGATGTGTGAC...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAGATCTCCCTAACATGTaGACTGTACAGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSDLPNM*TVQLFT
Trigger: TGTGAAGAGCTGTACAGTCCACATGTTAGGGAGATC...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CTTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTAATAGTTATGTTTACTaGAAAAGCCAGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LTVNVTCLWGSGYQGLDPNSYVY*KSQSPT
Trigger: GGTGGGGCTCTGGCTTTTTCAGTAAACATAACTATT...AGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAATAGTTATGTTTACTaGAAAAGCCAGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHNSYVY*KSQSPT
Trigger: GGTGGGGCTCTGGCTTTTTCAGTAAACATAACTATT...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCAGTGCTGGTAAAAGTTTaGACTGAACGAGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSVLVKV*TERESS
Trigger: AGAAGATTCTCGTTCAGTGCAAACTTTTACCAGCAC...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp GGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGGAGCTAGATCATGTTTaGTCAGAACCTAATCATGAG +
Preference number: 4 (lower is better)
Translates to: GTSSSKFGRFGSKTSKSQELDHV*SEPNHE
Trigger: CTCATGATTAGGTTCTGAGCAAACATGATCTAGCTC...CTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp TCCTTGAAAATATTCATGATTACCTGTAGGGAACAGGAAAGAAAGCACAGAAGTTTTTCGCACCAACTATaGCCTCCTCACTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SLKIFMITCREQERKHRSFSHQL*PPHWAH
Trigger: GTGAGCCCAGTGAGGAGGGCATAGTTGGTGCGAAAA...ACTTCTGTGCTTTCTTTCCTGTTCCCTACAGGTAATCATGAATATTTTCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGACAGTCAATGTTACTTaGCTATGGGGTTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRTVNVT*LWGSGY
Trigger: ATATCCAGAACCCCATAGGCAAGTAACATTGACTGT...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp CATCATAACTGCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTACTCCATTATCTCAGTaGTTCTGTAGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: HHNCTETCGCPSRMFESPTPLSQ*FCSNHD
Trigger: ATCATGATTGCTACAGAAGCACTGAGATAATGGAGT...AGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp AAGAGTAAAGACTGCCACAATAGGCCCTTATCACTGTATAAATCAGAGCAGCATGAATCTCCTTTTGTTTaGCACAGTCATCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: KSKDCHNRPLSLYKSEQHESPFV*HSHPHS
Trigger: GGAGTGGGGATGACTGTGGCAAACAAAAGGAGATTC...ATGCTGCTCTGATTTATACAGTGATAAGGGCCTATTGTGGCAGTCTTTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCGATCTCCCTAACATGTaGACTGTACAGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTDLPNM*TVQLFT
Trigger: TGTGAAGAGCTGTACAGTCCACATGTTAGGGAGATC...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATAAGCCTCCCACATATGTaGTGCTTATCAGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: LNPLYTVTKSPRVKTATISLPHM*CLSGIS
Trigger: GGAGATTCCTGATAAGCACCACATATGTGGGAGGCT...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTAATGTTACTTGCCTATaGGGTTCTGGATATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSNVTCL*GSGYQG
Trigger: TCCCTGATATCCAGAACCCCATAGGCAAGTAACATT...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp TCCTTGAAAATATTCATGATTACCTGTAGGGAACAGGAAAGAAAGCACAGAAGTTTTCTGGAAAAGACCTaGCTCAGCAGTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: SLKIFMITCREQERKHRSFLEKT*LSSPDL
Trigger: CAGGTCAGGACTGCTGAGTCAGGTCTTTTCCAGAAA...ACTTCTGTGCTTTCTTTCCTGTTCCCTACAGGTAATCATGAATATTTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATACTTCATCACCGCAACTaGAAAGCATCTGTCCATCAT +
Preference number: 4 (lower is better)
Translates to: LNPLYTVTKSPRVKTATILHHRN*KASVHH
Trigger: ATGATGGACAGATGCTTTTCAGTTGCGGTGATGAAG...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCAAAATTGGTAAGCAATaGTGTCCACATCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTKIGKQ*CPHPPQ
Trigger: CTGAGGTGGATGTGGACATCATTGCTTACCAATTTT...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp TCCTTGAAAATATTCATGATTACCTGTAGGGAACAGGAAAGAAAGCACAGAAGTCGCGAAGGAAGGTCCTaGAGTCTTCACTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLKIFMITCREQERKHRSREGRS*SLHCLS
Trigger: AGAAAGACAGTGAAGACTGCAGGACCTTCCTTCGCG...ACTTCTGTGCTTTCTTTCCTGTTCCCTACAGGTAATCATGAATATTTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTGTGCTGGTAAAAGTTTaGACTGAACGAGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSVLVKV*TERESS
Trigger: AGAAGATTCTCGTTCAGTGCAAACTTTTACCAGCAC...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR GCA 90 bp CTTACAGTCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTACAGTCAATGTTACTTaGCTATGGGGTTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: LTVNVTCLWGSGYQGLDPTVNVT*LWGSGY
Trigger: ATATCCAGAACCCCATAGGCAAGTAACATTGACTGT...AGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGACTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR GCA 90 bp TTAGATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGATCTGTGCAGGTCAACTaGCCAGGGAGACACAGGAAT +
Preference number: 4 (lower is better)
Translates to: LDLSTILALPYSSPYNLGSVQVN*PGRHRN
Trigger: ATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA...TCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCAATGTTACTTGCCTATaGGGTTCTGGATATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTNVTCL*GSGYQG
Trigger: TCCCTGATATCCAGAACCCCATAGGCAAGTAACATT...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CCA 90 bp AAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTGATCTGTCAACTATTTTaGCTTTACCATATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KSQQTLAQVLLVRARSCLICQLF*LYHIPL
Trigger: GAGAGGAATATGGTAAAGCCAAAATAGTTGACAGAT...CAAACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp TCCTTGAAAATATTCATGATTACCTGTAGGGAACAGGAAAGAAAGCACAGAAGTCACAGGCACTGGCAGTaGTATAATTCCATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLKIFMITCREQERKHRSHRHWQ*YNSIKS
Trigger: GCTCTTGATGGAATTATATCACTGCCAGTGCCTGTG...ACTTCTGTGCTTTCTTTCCTGTTCCCTACAGGTAATCATGAATATTTTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR TCA 90 bp CTCAGTGCTTCTGTAGCAATCATGATTTTCACATTGCCCTACAGAGGTCTTACAGCTTGCTGTTGCTTGTaGATTGTGGAAAACAAGATA +
Preference number: 4 (lower is better)
Translates to: LSASVAIMIFTLPYRGLTACCCL*IVENKI
Trigger: TATCTTGTTTTCCACAATTCACAAGCAACAGCAAGC...TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACGTAATAGCCAAAAACTaGAAGTTACCCAAACATCCA +
Preference number: 4 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHVIAKN*KLPKHP
Trigger: TGGATGTTTGGGTAACTTTCAGTTTTTGGCTATTAC...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR TCA 90 bp TCCTTGAAAATATTCATGATTACCTGTAGGGAACAGGAAAGAAAGCACAGAAGTGTGCTACTCCCTTCATaGCAGAACCCAATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLKIFMITCREQERKHRSVLLPS*QNPILF
Trigger: GAAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCAC...ACTTCTGTGCTTTCTTTCCTGTTCCCTACAGGTAATCATGAATATTTTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
3UTR CAA 72 bp TATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATaGCCCTACAGAGGTCTTACAGTCAATGTTACTTGC +
Preference number: 4 (lower is better)
Translates to: YLSASVAIMIFT*PYRGLTVNVTC
Trigger: GCAAGTAACATTGACTGTAAGACCTCTGTAGGGCAATGTGAAAATCATGATTGCTACAGAAGCACTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
3UTR CAA 72 bp ACAAGTAAGTCACAGCTATCACGTTTACAGTTAACATaGTCCATGAAGATGGAAAATCGTGTCAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: TSKSQLSRLQLT*SMKMENRVRKS
Trigger: GGATTTCCTGACACGATTTTCCATCTTCATGGACAATGTTAACTGTAAACGTGATAGCTGTGACTTACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS GCA 90 bp GTCCATCAGCACCGCCGCTGCCATGAGAAGCGGATGAACAGTCTGTaGCCTGTGGGCTCAGCCGAAACCCCACGCCTCCACCGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: VHQHRRCHEKRMNSL*PVGSAETPRLHRAG
Trigger: TCCAGCGCGGTGGAGGCGTGGGGTTTCGGCTGAGCCCACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS GCA 90 bp CTCGAAGGTCACACAACTCTGAACCCGGTCCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAACAGTCTGTGCCCTGTGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LEGHTTLNPVHQHRR*HEKRMNSLCPVGSA
Trigger: GGCTGAGCCCACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATGGACCGGGTTCAGAGTTGTGTGACCTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
CDS CCA 90 bp GGCAGACACCTCCGCGAGAGGCCGCCCGTCCCACGACAGGGGTCATaGATTGTAACAAAAGCGCGAAGGAAGGTCCTGCAGTCTTCACTG +
Preference number: 5 (lower is better)
Translates to: GRHLRERPPVPRQGS*IVTKARRKVLQSSL
Trigger: CAGTGAAGACTGCAGGACCTTCCTTCGCGCTTTTGTTACAATCCATGACCCCTGTCGTGGGACGGGCGGCCTCTCGCGGAGGTGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282286.6
ENST00000443917.6
ENST00000598744.1
CDS TCA 90 bp AGGTCACACAACTCTGAACCCGGTCCATCAGCACCGCCGCTGCCATaGGAAGCGGATGAACAGTCTGTGCCCTGTGGGCTCAGCCGAAAC +
Preference number: 5 (lower is better)
Translates to: RSHNSEPGPSAPPLP*EADEQSVPCGLSRN
Trigger: GTTTCGGCTGAGCCCACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATGGACCGGGTTCAGAGTTGTGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
CDS GCA 90 bp TCACAGTCTGTTCTCAACCTGAACCCGGTCCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAACAGTCTGTGCCCTGTGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SQSVLNLNPVHQHRR*HEKRMNSLCPVGSA
Trigger: GGCTGAGCCCACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATGGACCGGGTTCAGGTTGAGAACAGACTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598744.1
CDS TCA 90 bp CAGCAGGGCCATGCCCTCTGTAGGTCTCCTTTACTGTGGCTGCAGTaGTGTCTGCCCTGTCAGGCACCCAAGGTTTTCTGCCCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: QQGHALCRSPLLWLQ*CLPCQAPKVFCPLQ
Trigger: TTGGAGGGGGCAGAAAACCTTGGGTGCCTGACAGGGCAGACATCACTGCAGCCACAGTAAAGGAGACCTACAGAGGGCATGGCCCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS GCA 90 bp CCATTCAGCAGGGCCATGCCCTCTGTAGGTCTCCTTTACTGTGGCTaGAGTGATGTCTGCCCTGTCAGGCACCCAAGGTTTTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: PFSRAMPSVGLLYCG*SDVCPVRHPRFSAP
Trigger: GGGGGCAGAAAACCTTGGGTGCCTGACAGGGCAGACATCACTGCAGCCACAGTAAAGGAGACCTACAGAGGGCATGGCCCTGCTGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS-3UTR CAA 90 bp GCACCAACTATGCCCTCCTCACTGGGCTCACAGGAAATCCTGGCAGCCAGGCCACTTCACTGTCTTTCTTaGCTAGGTTCCACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: APTMPSSLGSQEILAARPLHCLS*LGSTRA
Trigger: GGCTCTCGTGGAACCTAGCAAAGAAAGACAGTGAAG...TGGCCTGGCTGCCAGGATTTCCTGTGAGCCCAGTGAGGAGGGCATAGTTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp GGAATGCTGGCTGGGTCAGAGAAGACCCATCCCTGGATCTCTCTTCTGTCACTGTCCATCATAGTCTCCTaGGTGTTGCCTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: GMLAGSEKTHPWISLLSLSIIVS*VLPETG
Trigger: TCCAGTCTCAGGCAACACCAAGGAGACTATGATGGA...CAGTGACAGAAGAGAGATCCAGGGATGGGTCTTCTCTGACCCAGCCAGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS CCA 90 bp AAGTCCATCCCTTCCTCCCTGCACGTAAAGGATCTCCCTAACATGTaGACTGTACAGCTCTTCACAAATGAGGCCCCTCCATCATCCCCT +
Preference number: 5 (lower is better)
Translates to: KSIPSSLHVKDLPNM*TVQLFTNEAPPSSP
Trigger: AGGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGTACAGTCCACATGTTAGGGAGATCCTTTACGTGCAGGGAGGAAGGGATGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS CCA 90 bp CTGTCCATCATAGTCTCCTTGGTGTTGCCTGAGACTGGAGCTGTGTaGGAAAGACTCCATGCATTCAGTCCTTCTGCATGGACTCACCCT +
Preference number: 5 (lower is better)
Translates to: LSIIVSLVLPETGAV*ERLHAFSPSAWTHP
Trigger: AGGGTGAGTCCATGCAGAAGGACTGAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAGACTATGATGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp TGCACTCCCATCCCACACCATCATAACTGCACCGAGACTTGTGGATGCCCCTCTTGTTCGAATCTCCTTTaGTTTGCCACAGTCATCCCC +
Preference number: 5 (lower is better)
Translates to: CTPIPHHHNCTETCGCPSCSNLL*FATVIP
Trigger: GGGGATGACTGTGGCAAACAAAAGGAGATTCGAACA...AGAGGGGCATCCACAAGTCTCGGTGCAGTTATGATGGTGTGGGATGGGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp CAATCCCTCAACAGTGCTGGGGAGTACGTGACAGTTAAGGGACCCAACTTATGTCTTCACTGTCTTTCTTaGCTAGGTTCCACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: QSLNSAGEYVTVKGPNLCLHCLS*LGSTRA
Trigger: GGCTCTCGTGGAACCTAGCAAAGAAAGACAGTGAAG...ACATAAGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCACTGTTGAGGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCCTTCACTGTCTTTCTTaGCTAGGTTCCACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: AYQESPQGGMNIRCSSASLHCLS*LGSTRA
Trigger: GGCTCTCGTGGAACCTAGCAAAGAAAGACAGTGAAG...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTTCCATCATAGTCTCCTaGGTGTTGCCTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGSIIVS*VLPETG
Trigger: TCCAGTCTCAGGCAACACCAAGGAGACTATGATGGA...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCGGTACTCACAGAGCATaGCTCTGGTGTGAGTCCTAT +
Preference number: 5 (lower is better)
Translates to: AYQESPQGGMNIRCSSASGTHRA*LWCESY
Trigger: ATAGGACTCACACCAGAGCAATGCTCTGTGAGTACC...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp AGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTGGTACTCACAGAGCATaGCTCTGGTGTGAGTCCTAT +
Preference number: 5 (lower is better)
Translates to: RKSQQTLAQVLLVRARSCGTHRA*LWCESY
Trigger: ATAGGACTCACACCAGAGCAATGCTCTGTGAGTACC...ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp AAGGTGGTGCCCACAAAAGGTGCTACTCCCTTCATGACAGAACCCAATTCTTTTCCTCTGACAGTGGCCTaGGCCACAGGAGATACAGAT +
Preference number: 5 (lower is better)
Translates to: KVVPTKGATPFMTEPNSFPLTVA*ATGDTD
Trigger: ATCTGTATCTCCTGTGGCCAAGGCCACTGTCAGAGG...AAAAGAATTGGGTTCTGTCATGAAGGGAGTAGCACCTTTTGTGGGCACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGCCTCTGACAGTGGCCTaGGCCACAGGAGATACAGAT +
Preference number: 5 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKPLTVA*ATGDTD
Trigger: ATCTGTATCTCCTGTGGCCAAGGCCACTGTCAGAGG...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp AAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTGCTTCACTGTCTTTCTTaGCTAGGTTCCACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: KSQQTLAQVLLVRARSCLLHCLS*LGSTRA
Trigger: GGCTCTCGTGGAACCTAGCAAAGAAAGACAGTGAAG...CAAACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp CAATCCCTCAACAGTGCTGGGGAGTACGTGACAGTTAAGGGACCCAACTTATGTCTAGCTCAGGTCCTTTaGGTGAGAGCTAGATCATGT +
Preference number: 5 (lower is better)
Translates to: QSLNSAGEYVTVKGPNLCLAQVL*VRARSC
Trigger: ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAG...ACATAAGTTGGGTCCCTTAACTGTCACGTACTCCCCAGCACTGTTGAGGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCTGTTCGAATCTCCTTTaGTTTGCCACAGTCATCCCC +
Preference number: 5 (lower is better)
Translates to: APRLVDAPLECSNLLLFACSNLL*FATVIP
Trigger: GGGGATGACTGTGGCAAACAAAAGGAGATTCGAACA...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCCATCATAGTCTCCTaGGTGTTGCCTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKSIIVS*VLPETG
Trigger: TCCAGTCTCAGGCAACACCAAGGAGACTATGATGGA...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp AAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTGAGAGCTAGATCATGTTTGCTGGATATCAGGGACTaGATCCTGTACAGGTACAGA +
Preference number: 5 (lower is better)
Translates to: KSQQTLAQVLLVRARSCLLDIRD*ILYRYR
Trigger: TCTGTACCTGTACAGGATCAAGTCCCTGATATCCAG...CAAACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGCGAATCTCCTTTTGTTaGCCACAGTCATCCCCACTC +
Preference number: 5 (lower is better)
Translates to: GTSSSKFGRFGSKTSKSQRISFC*PQSSPL
Trigger: GAGTGGGGATGACTGTGGCAAACAAAAGGAGATTCG...CTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp CAGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGCTAGCTCAGGTCCTTTaGGTGAGAGCTAGATCATGT +
Preference number: 5 (lower is better)
Translates to: QHGTSSSKFGRFGSKTSKLAQVL*VRARSC
Trigger: ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAG...CTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTCCAAATTTGGGCGATTaGGCAGTAAGACAAGTAAGT +
Preference number: 5 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGPNLGD*AVRQVS
Trigger: ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGG...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATAATAGTCTCCTTGGTGTaGCCTGAGACTGGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LNPLYTVTKSPRVKTATIIVSLV*PETGAV
Trigger: CACAGCTCCAGTCTCAGGCAACACCAAGGAGACTAT...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp ATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACCTAGCTCAGGTCCTTTaGGTGAGAGCTAGATCATGT +
Preference number: 5 (lower is better)
Translates to: MGQAVPNLGDLAVRQVSHLAQVL*VRARSC
Trigger: ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAG...GTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp GATGGAAAATCGTGTCAGGAAATCCCAGCAGACCCTAGCTCAGGTCCTTTTGGTATCATGATTTTCACATaGCCCTACAGAGGTCTTACA +
Preference number: 5 (lower is better)
Translates to: DGKSCQEIPADPSSGPFGIMIFT*PYRGLT
Trigger: TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGAT...ACCAAAAGGACCTGAGCTAGGGTCTGCTGGGATTTCCTGACACGATTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GTCATCCCCACTCCATTATCTCAGTGCTTCTGTAGCAATCATGATTTTCACATTTCCATCATAGTCTCCTaGGTGTTGCCTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: VIPTPLSQCFCSNHDFHISIIVS*VLPETG
Trigger: TCCAGTCTCAGGCAACACCAAGGAGACTATGATGGA...AATGTGAAAATCATGATTGCTACAGAAGCACTGAGATAATGGAGTGGGGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp TCTGTGCAGGTCAACTGCCCAGGGAGACACAGGAATCCACAAACATTTAGATTACCAAATTTGGGCGATTaGGCAGTAAGACAAGTAAGT +
Preference number: 5 (lower is better)
Translates to: SVQVNCPGRHRNPQTFRLPNLGD*AVRQVS
Trigger: ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGG...TAATCTAAATGTTTGTGGATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCACAGTACAGTCAATGTTACTaGCCTATGGGGTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: GTSSSKFGRFGSKTSKSQYSQCY*PMGFWI
Trigger: TATCCAGAACCCCATAGGCAAGTAACATTGACTGTA...CTGTGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCATCTGCTAGCGATCTGTCAACTATTTaGGCTTTACCATATTCCTCT +
Preference number: 5 (lower is better)
Translates to: AYQESPQGGMNIRCSSASDLSTI*ALPYSS
Trigger: AGAGGAATATGGTAAAGCCAAAATAGTTGACAGATC...GCTAGCAGATGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GCACCGAGACTTGTGGATGCCCCTCTAGAATGTTCGAATCTCCTTTTGTTTGCCAGAAAATGCTTGCTGTaGCTTGTGAATTGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: APRLVDAPLECSNLLLFARKCLL*LVNCGK
Trigger: TTTTCCACAATTCACAAGCAACAGCAAGCATTTTCT...GGCAAACAAAAGGAGATTCGAACATTCTAGAGGGGCATCCACAAGTCTCGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp CTCAATCCACTCTACACAGTAACAAAATCCCCAAGAGTAAAGACTGCCACAATACTAGCTCAGGTCCTTTaGGTGAGAGCTAGATCATGT +
Preference number: 5 (lower is better)
Translates to: LNPLYTVTKSPRVKTATILAQVL*VRARSC
Trigger: ACATGATCTAGCTCTCACCAAAAGGACCTGAGCTAG...TATTGTGGCAGTCTTTACTCTTGGGGATTTTGTTACTGTGTAGAGTGGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCATACAGTCAATGTTACTaGCCTATGGGGTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSYSQCY*PMGFWI
Trigger: TATCCAGAACCCCATAGGCAAGTAACATTGACTGTA...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGATCATGATTTTCACATaGCCCTACAGAGGTCTTACA +
Preference number: 5 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRIMIFT*PYRGLT
Trigger: TGTAAGACCTCTGTAGGGCAATGTGAAAATCATGAT...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp CATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAAGCCCTGCCTCAATGTaGGTAAAAATTGGTAAGCAA +
Preference number: 5 (lower is better)
Translates to: HGTSSSKFGRFGSKTSKSSPASM*VKIGKQ
Trigger: TTGCTTACCAATTTTTACCAACATTGAGGCAGGGCT...TGACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp TCAATGTTACTTGCCTATGGGGTTCTGGATATCAGGGACTTGATCCTGTACAGGCAATCTTTTGTTGTGTaGGATATCTTGACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SMLLAYGVLDIRDLILYRQSFVV*DILTVV
Trigger: CACCACAGTCAAGATATCCAACACAACAAAAGATTG...CCTGTACAGGATCAAGTCCCTGATATCCAGAACCCCATAGGCAAGTAACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCCCAAATTTGGGCGATTaGGCAGTAAGACAAGTAAGT +
Preference number: 5 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTPNLGD*AVRQVS
Trigger: ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGG...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS-3UTR CAA 90 bp GATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGAGAGCTGGATATCAGGGACTaGATCCTGTACAGGTACAGA +
Preference number: 5 (lower is better)
Translates to: DLSTILALPYSSPYNLGELDIRD*ILYRYR
Trigger: TCTGTACCTGTACAGGATCAAGTCCCTGATATCCAG...CTCTCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp GGCAGTGATATAATTCCATCAAGAGCTCTAGACAGTTACAAAGTGCAACACACCAGCCCTGCCTCAATGTaGGTAAAAATTGGTAAGCAA +
Preference number: 5 (lower is better)
Translates to: GSDIIPSRALDSYKVQHTSPASM*VKIGKQ
Trigger: TTGCTTACCAATTTTTACCAACATTGAGGCAGGGCT...GGTGTGTTGCACTTTGTAACTGTCTAGAGCTCTTGATGGAATTATATCACTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp ATATGTGGTGCTTATCAGGAATCTCCCCAGGGTGGAATGAATATACGGTGCTCAGATCTGTCAACTATTTaGGCTTTACCATATTCCTCT +
Preference number: 5 (lower is better)
Translates to: ICGAYQESPQGGMNIRCSDLSTI*ALPYSS
Trigger: AGAGGAATATGGTAAAGCCAAAATAGTTGACAGATC...TGAGCACCGTATATTCATTCCACCCTGGGGAGATTCCTGATAAGCACCACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp AGCATGGGACAAGCAGTTCCAAATTTGGGCGATTTGGCAGTAAGACAAGTAAGTCAATCTTTTGTTGTGTaGGATATCTTGACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SMGQAVPNLGDLAVRQVSQSFVV*DILTVV
Trigger: CACCACAGTCAAGATATCCAACACAACAAAAGATTG...ACTTACTTGTCTTACTGCCAAATCGCCCAAATTTGGAACTGCTTGTCCCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp TCTGTGCAGGTCAACTGCCCAGGGAGACACAGGAATCCACAAACATTTAGATTAAGAAAATGCTTGCTGTaGCTTGTGAATTGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SVQVNCPGRHRNPQTFRLRKCLL*LVNCGK
Trigger: TTTTCCACAATTCACAAGCAACAGCAAGCATTTTCT...TAATCTAAATGTTTGTGGATTCCTGTGTCTCCCTGGGCAGTTGACCTGCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS-3UTR CAA 90 bp TTAGATCTGTCAACTATTTTGGCTTTACCATATTCCTCTCCCTACAATTTAGGACGAATCTCCTTTTGTTaGCCACAGTCATCCCCACTC +
Preference number: 5 (lower is better)
Translates to: LDLSTILALPYSSPYNLGRISFC*PQSSPL
Trigger: GAGTGGGGATGACTGTGGCAAACAAAAGGAGATTCG...TCCTAAATTGTAGGGAGAGGAATATGGTAAAGCCAAAATAGTTGACAGATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282286.6
ENST00000391705.7
CDS GCA 72 bp CACCGCCGCTGCCATGAGAAGCGGATGAACAGTCTGTaGCCTGTGGGCTCAGCCGAAACCCCACGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: HRRCHEKRMNSL*PVGSAETPRLH
Trigger: GTGGAGGCGTGGGGTTTCGGCTGAGCCCACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS CCA 72 bp CTCCGCGAGAGGCCGCCCGTCCCACGACAGGGGTCATaGATTGTAACAAAAGCGCGAAGGAAGGTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LRERPPVPRQGS*IVTKARRKVLQ
Trigger: CTGCAGGACCTTCCTTCGCGCTTTTGTTACAATCCATGACCCCTGTCGTGGGACGGGCGGCCTCTCGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282286.6
ENST00000443917.6
ENST00000598744.1
CDS GCA 72 bp CACACAACTCTGAACCCGGTCCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAACAGTCTGTGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: HTTLNPVHQHRR*HEKRMNSLCPV
Trigger: CACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATGGACCGGGTTCAGAGTTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
CDS GCA 72 bp GTTCTCAACCTGAACCCGGTCCATCAGCACCGCCGCTaGCATGAGAAGCGGATGAACAGTCTGTGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: VLNLNPVHQHRR*HEKRMNSLCPV
Trigger: CACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATGGACCGGGTTCAGGTTGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598744.1
CDS GCA 72 bp AGGGCCATGCCCTCTGTAGGTCTCCTTTACTGTGGCTaGAGTGATGTCTGCCCTGTCAGGCACCCAAGGTTT +
Preference number: 6 (lower is better)
Translates to: RAMPSVGLLYCG*SDVCPVRHPRF
Trigger: AAACCTTGGGTGCCTGACAGGGCAGACATCACTGCAGCCACAGTAAAGGAGACCTACAGAGGGCATGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443917.6
CDS GCA 72 bp GACACCATCAACACTACTGCAGTAGCTGCTCCCTCATaGTCACAGTCTGTTCTCAACCTGAACCCGGTCCAT +
Preference number: 6 (lower is better)
Translates to: DTINTTAVAAPS*SQSVLNLNPVH
Trigger: ATGGACCGGGTTCAGGTTGAGAACAGACTGTGAGCATGAGGGAGCAGCTACTGCAGTAGTGTTGATGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598744.1
CDS GCA 72 bp AGCTGTGTGGGAAAGACTCCATGCATTCAGTCCTTCTaGATGGACTCACCCTATTGTAAGTGGTCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SCVGKTPCIQSF*MDSPYCKWSGA
Trigger: AGCACCAGACCACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCATGGAGTCTTTCCCACACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS CAA 90 bp ATCACCGCAACTGAAAAGCATCTGTCCATCATAGTCTCCTTGGTGTaGCCTGAGACTGGAGCTGTGTGGGAAAGACTCCATGCATTCAGT +
Preference number: 6 (lower is better)
Translates to: ITATEKHLSIIVSLV*PETGAVWERLHAFS
Trigger: ACTGAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAGACTATGATGGACAGATGCTTTTCAGTTGCGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS TCA 72 bp AAAGCATCTGTCCATCATAGTCTCCTTGGTGTTGCCTaGGACTGGAGCTGTGTGGGAAAGACTCCATGCATT +
Preference number: 6 (lower is better)
Translates to: KASVHHSLLGVA*DWSCVGKTPCI
Trigger: AATGCATGGAGTCTTTCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAGACTATGATGGACAGATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS TCA 72 bp AGGTGTCCAGGAAGGCTTTCCCTTCATCACCGCAACTaGAAAGCATCTGTCCATCATAGTCTCCTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: RCPGRLSLHHRN*KASVHHSLLGV
Trigger: AACACCAAGGAGACTATGATGGACAGATGCTTTTCAGTTGCGGTGATGAAGGGAAAGCCTTCCTGGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1
CDS CAA 72 bp ACTGAAAAGCATCTGTCCATCATAGTCTCCTTGGTGTaGCCTGAGACTGGAGCTGTGTGGGAAAGACTCCAT +
Preference number: 6 (lower is better)
Translates to: TEKHLSIIVSLV*PETGAVWERLH
Trigger: ATGGAGTCTTTCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAGACTATGATGGACAGATGCTTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282286.6
ENST00000391705.7
ENST00000443917.6
ENST00000598744.1