RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000166526

Ensembl transcript IDs: ENST00000292393.9, ENST00000299667.9, ENST00000303915.10, ENST00000412947.6, ENST00000413658.6, ENST00000415068.1, ENST00000424697.5, ENST00000428683.5, ENST00000441298.5, ENST00000449785.5, ENST00000460331.5, ENST00000466121.1, ENST00000479192.1, ENST00000485892.5, ENST00000487620.1

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTaGTACCAGGCTCAGGCACAGCCTGCCTTCTCTGGGCTTCGTTTT +
Preference number: 1 (lower is better)
Translates to: VGKTRGVPSSPSNEL*YQAQAQPAFSGLRF
Trigger: AAAACGAAGCCCAGAGAAGGCAGGCTGTGCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR GCA 90 bp AAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTaGCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCAC +
Preference number: 1 (lower is better)
Translates to: KHNGRSSRRLGKLGE*HPHPATSSATRLRH
Trigger: GTGCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR TCA 90 bp CTCCCTTTTGGGCTTTGCTCTTTCTCTGCATTAATCTTCAGCTGCTaGAGAGTCAGAGGTGGAGGCAGGAGTGGTCTGGCTCCTGGGGCT +
Preference number: 1 (lower is better)
Translates to: LPFGLCSFSALIFSC*RVRGGGRSGLAPGA
Trigger: AGCCCCAGGAGCCAGACCACTCCTGCCTCCACCTCTGACTCTTCAGCAGCTGAAGATTAATGCAGAGAAAGAGCAAAGCCCAAAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR GCA 90 bp GCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGGATaGCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT +
Preference number: 1 (lower is better)
Translates to: ASIPVIEFVSLNIRG*LRSASSTATWQAGG
Trigger: ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
3UTR CCA 90 bp GGCAGGGGGTCTGCTGGCAATATCACCAGGTTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAGA +
Preference number: 1 (lower is better)
Translates to: GRGSAGNITRFLLET*SGCSKSPKGHHHHR
Trigger: TCTGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGATATTGCCAGCAGACCCCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR GCA 90 bp TTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTaGTGTGAGAAAAACAGTTTAGTGCAAACTCCTTTCCTAAATGGG +
Preference number: 1 (lower is better)
Translates to: FCPDCASIPTLERFL*CEKNSLVQTPFLNG
Trigger: CCCATTTAGGAAAGGAGTTTGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR TCA 90 bp GAAAAACTATTCTGTTTAATAGTGCACTTCATTTATGCTACAGGATaGGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTG +
Preference number: 1 (lower is better)
Translates to: EKLFCLIVHFIYATG*AGLGKHNGRSSRRL
Trigger: CAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCATAAATGAAGTGCACTATTAAACAGAATAGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
3UTR-3UTR TCA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCACTGCTGTCTGTGCTaGCTACGCGGACTCCAACTA +
Preference number: 2 (lower is better)
Translates to: KLGECHPHPATSSATRLRHCCLC*LRGLQL
Trigger: TAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTG...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: NSGSAILTQQRALLPGSGILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp ACATCAGCGAGTCCACACTGGAGAGGGAGAAGCACCGTAACTTTCAAGCGCTCCACATCAGGGGATGCCTaGGGAGTGCGAGCTCCACAG +
Preference number: 2 (lower is better)
Translates to: TSASPHWRGRSTVTFKRSTSGDA*GVRAPQ
Trigger: CTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGT...GGAGCGCTTGAAAGTTACGGTGCTTCTCCCTCTCCAGTGTGGACTCGCTGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
3UTR-3UTR CCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGAGTGGTCTGGCTCCTaGGGCTGGGTGTCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: EQGWENTMEGHPVGWENSEWSGS*GWVSEV
Trigger: CACCTCTGACACCCAGCCCCAGGAGCCAGACCACTC...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTGAGACTCAGGGAAAGTaGGGAAAATGGGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTETQGK*GKWVCG
Trigger: GCCACACACCCATTTTCCTCACTTTCCCTGAGTCTC...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTAACTGGTCCCAGAGCTaGTTTCTATTCCCAGCACGC +
Preference number: 2 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTNWSQS*FLFPAR
Trigger: GCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTT...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: GWENSGSAILTQQRALLPILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGGAAACATGGTCTGGCTaGTCCAAGAGCCCTAAAGGA +
Preference number: 2 (lower is better)
Translates to: KLGECHPHPATSSATRLRETWSG*SKSPKG
Trigger: TCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTC...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCTCACCAGGTTTCTCTTaGAAACATGGTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: NSGSAILTQQRALLPGSGSPGFS*KHGLAA
Trigger: AGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGA...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCGAAAATTCAACGATTTaGCCCATCTGCCCCATTCTC +
Preference number: 2 (lower is better)
Translates to: NSGSAILTQQRALLPGSGENSTI*PICPIL
Trigger: GAGAATGGGGCAGATGGGGCAAATCGTTGAATTTTC...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTTCACCAGGTTTCTCTTaGAAACATGGTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: GKTRGVPSSPSNELCYQASPGFS*KHGLAA
Trigger: AGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGA...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGGCCATCCACTTGCCTTaGCGCTTTCTAAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVAIHLP*RFLRLV
Trigger: CACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGC...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCCTCCCTTTTGGGCTTTaGTCTTTCTCTGCATTAATC +
Preference number: 2 (lower is better)
Translates to: NSGSAILTQQRALLPGSGLPFGL*SFSALI
Trigger: GATTAATGCAGAGAAAGAGCAAAGCCCAAAAGGGAG...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCTTCCATCCCCACCTTaGAAAGGTTCCTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTLPSPP*KGSSAV
Trigger: CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAG...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTATGGCAGGGGGTCTGCTaGCAATATCACCAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: RGERAGQAGQVSSLKASLWQGVC*QYHQVS
Trigger: AGAAACCTGGTGATATTGCCAGCAGACCCCCTGCCA...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGGAGACTCAGGGAAAGTaGGGAAAATGGGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVETQGK*GKWVCG
Trigger: GCCACACACCCATTTTCCTCACTTTCCCTGAGTCTC...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTACTGTTTGGACAGATTTaGCCATTCAGCCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: RGERAGQAGQVSSLKASLLFGQI*PFSPRT
Trigger: TGTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAG...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCATTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPFLLET*SGCSKS
Trigger: GCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAA...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTATGAAAAGTCTGAGTTaGAAGGGACACATCCTAAGC +
Preference number: 2 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTMKSLS*KGHILS
Trigger: GCTTAGGATGTGTCCCTTTCAACTCAGACTTTTCAT...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGCCATCCACTTGCCTTaGCGCTTTCTAAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: QLKESIEFCPDCASIPTLAIHLP*RFLRLV
Trigger: CACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGC...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCCACTGCTGTCTGTGCTaGCTACGCGGACTCCAACTA +
Preference number: 2 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIHCCLC*LRGLQL
Trigger: TAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTG...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGAAAATTCAACGATTTaGCCCATCTGCCCCATTCTC +
Preference number: 2 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPENSTI*PICPIL
Trigger: GAGAATGGGGCAGATGGGGCAAATCGTTGAATTTTC...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCACTCCCTTTTGGGCTTTaGTCTTTCTCTGCATTAATC +
Preference number: 2 (lower is better)
Translates to: GWENSGSAILTQQRALLPLPFGL*SFSALI
Trigger: GATTAATGCAGAGAAAGAGCAAAGCCCAAAAGGGAG...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTCTTCCATCCCCACCTTaGAAAGGTTCCTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGLPSPP*KGSSAV
Trigger: CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAG...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAGACTCAGGGAAAGTaGGGAAAATGGGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: QLKESIEFCPDCASIPTLETQGK*GKWVCG
Trigger: GCCACACACCCATTTTCCTCACTTTCCCTGAGTCTC...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAAAGGTTCCTCTGCTGTaGGAAAAACAGTTTAGTGCA +
Preference number: 2 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPKVPLL*EKQFSA
Trigger: TGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTT...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTGAAAATTCAACGATTTaGCCCATCTGCCCCATTCTC +
Preference number: 2 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTENSTI*PICPIL
Trigger: GAGAATGGGGCAGATGGGGCAAATCGTTGAATTTTC...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGAACTGGTCCCAGAGCTaGTTTCTATTCCCAGCACGC +
Preference number: 2 (lower is better)
Translates to: QLKESIEFCPDCASIPTLNWSQS*FLFPAR
Trigger: GCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTT...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTCTGTTTGGACAGATTTaGCCATTCAGCCCCAGGACA +
Preference number: 2 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGLFGQI*PFSPRT
Trigger: TGTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAG...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCACTCCCTTTTGGGCTTTaGTCTTTCTCTGCATTAATC +
Preference number: 2 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPLPFGL*SFSALI
Trigger: GATTAATGCAGAGAAAGAGCAAAGCCCAAAAGGGAG...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCAACTCCTTTCCTAAATaGGGTAACTGGTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SIEFCPDCASIPTLERFLNSFPK*GNWSQS
Trigger: GCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTT...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp AATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACTAAACTCCTTTCCTAAATaGGGTAACTGGTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: NQRPTLSASDPLPHSRLLNSFPK*GNWSQS
Trigger: GCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTT...TAGTAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTAACTCCTTTCCTAAATaGGGTAACTGGTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: WSGKRTREDSNQRPTLSANSFPK*GNWSQS
Trigger: GCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTT...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCCTTCCATCCCCACCTTaGAAAGGTTCCTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: FSWKHGLAAPRALKDTIILPSPP*KGSSAV
Trigger: CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAG...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CAA 90 bp TGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTaGACGCTTTCTAAGGCTGGTGTGATTTCTGGGAAAATTCAACGA +
Preference number: 2 (lower is better)
Translates to: WSQSCFLFPARHPLA*TLSKAGVISGKIQR
Trigger: TCGTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CAA 90 bp GGTGTCAGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTaGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATC +
Preference number: 2 (lower is better)
Translates to: GVRGERAGQAGQVSS*KASLPRHLEKIIFI
Trigger: GATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCTGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR GCA 90 bp TTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGAAGAAGTCTTGTCATTaGAGCAGCATCGATTCCGGT +
Preference number: 2 (lower is better)
Translates to: FQPQLKPHPPLQNTLGGPKKSCH*SSIDSG
Trigger: ACCGGAATCGATGCTGCTGCAATGACAAGACTTCTT...CGGTCCACCAAGTGTGTTCTGTAGTGGAGGGTGAGGTTTGAGCTGTGGCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
3UTR-3UTR TCA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGATGAAAAGTCTGAGTTaGAAGGGACACATCCTAAGC +
Preference number: 2 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVMKSLS*KGHILS
Trigger: GCTTAGGATGTGTCCCTTTCAACTCAGACTTTTCAT...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp GGCCAAGTGAGCTCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTGCCATCCACTTGCCTTaGCGCTTTCTAAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: GQVSSLKASLPRHLEKIIAIHLP*RFLRLV
Trigger: CACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGC...AATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACACCTAAATGGGGTAACTaGTCCCAGAGCTGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: SWKHGLAAPRALKDTIITPKWGN*SQSCFL
Trigger: TAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCCCTAAATGGGGTAACTaGTCCCAGAGCTGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIPKWGN*SQSCFL
Trigger: TAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp AATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACTATTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 2 (lower is better)
Translates to: NQRPTLSASDPLPHSRLLFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...TAGTAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CAA 90 bp AAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTaGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGCAAACT +
Preference number: 2 (lower is better)
Translates to: KESIEFCPDCASIPT*ERFLCCEKNSLVQT
Trigger: AGTTTGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCTTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 2 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAAAGGTTCCTCTGCTGTaGGAAAAACAGTTTAGTGCA +
Preference number: 2 (lower is better)
Translates to: SWKHGLAAPRALKDTIITKVPLL*EKQFSA
Trigger: TGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTT...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp GGCCAAGTGAGCTCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: GQVSSLKASLPRHLEKIIFLLET*SGCSKS
Trigger: GCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAA...AATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGTTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 2 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGTTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQFLLET*SGCSKS
Trigger: GCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAA...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGCGGTTACTAGCTGTTTaGACAGATTTGCCCATTCAG +
Preference number: 2 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVRLLAV*TDLPIQ
Trigger: CTGAATGGGCAAATCTGTCCAAACAGCTAGTAACCG...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGAAGGTTCCTCTGCTGTaGGAAAAACAGTTTAGTGCA +
Preference number: 2 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVKVPLL*EKQFSA
Trigger: TGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTT...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR TCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGATTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 2 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR GCA 72 bp ACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTaGTACCAGGCTCAGGCACAGCCTGCCTTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: TRGVPSSPSNEL*YQAQAQPAFSG
Trigger: CCCAGAGAAGGCAGGCTGTGCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR GCA 72 bp GGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTaGCATCCTCACCCAGCAACGAGCTCTGCTACCAGG +
Preference number: 3 (lower is better)
Translates to: GRSSRRLGKLGE*HPHPATSSATR
Trigger: CCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGGCTGTTTGGACAGATTaGCCCATTCAGCCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: KLGECHPHPATSSATRLRAVWTD*PIQPQD
Trigger: GTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAGC...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGCTTCCATCCCCACCTaGGAAAGGTTCCTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: GWENSGSAILTQQRALLPASIPT*ERFLCC
Trigger: ACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCATCACCAGGTTTCTCTaGGAAACATGGTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: NSGSAILTQQRALLPGSGITRFL*ETWSGC
Trigger: GCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGAT...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAGCTGTTTGGACAGATTaGCCCATTCAGCCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: RGERAGQAGQVSSLKASLAVWTD*PIQPQD
Trigger: GTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAGC...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CCA 72 bp TCTGACCCTCTCCCTCACAGCCGGTTACTAGCTGTTTaGACAGATTTGCCCATTCAGCCCCAGGACAACTGG +
Preference number: 3 (lower is better)
Translates to: SDPLPHSRLLAV*TDLPIQPQDNW
Trigger: CCAGTTGTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAGCTAGTAACCGGCTGTGAGGGAGAGGGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR TCA 72 bp CAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTaGCTACGCGGACTCCAACTAAAGGAATCCATCGAA +
Preference number: 3 (lower is better)
Translates to: QDPERPFHCCLC*LRGLQLKESIE
Trigger: TTCGATGGATTCCTTTAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CCA 72 bp GCAGGGGGTCTGCTGGCAATATCACCAGGTTTCTCTTaGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: AGGLLAISPGFS*KHGLAAPRALK
Trigger: CTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGATATTGCCAGCAGACCCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAATCACCAGGTTTCTCTaGGAAACATGGTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: RGERAGQAGQVSSLKASLITRFL*ETWSGC
Trigger: GCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGAT...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTATCACCAGGTTTCTCTaGGAAACATGGTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: WSGKRTREDSNQRPTLSAITRFL*ETWSGC
Trigger: GCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGAT...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp TTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGAAAGAAGTCTTGTCATaGCAGCAGCATCGATTCCGG +
Preference number: 3 (lower is better)
Translates to: FQPQLKPHPPLQNTLGGPKEVLS*QQHRFR
Trigger: CCGGAATCGATGCTGCTGCAATGACAAGACTTCTTT...CGGTCCACCAAGTGTGTTCTGTAGTGGAGGGTGAGGTTTGAGCTGTGGCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
3UTR GCA 72 bp AACTCCTTTCCTAAATGGGGTAACTGGTCCCAGAGCTaGTTTCTATTCCCAGCACGCCATCCACTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: NSFPKWGNWSQS*FLFPARHPLAL
Trigger: CAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR GCA 72 bp CCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: PTKGIHRILSRL*FHPHLGKVPLL
Trigger: CAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTAAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 3 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLNEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CCA 72 bp CAGTTTAGTGCAAACTCCTTTCCTAAATGGGGTAACTaGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCAT +
Preference number: 3 (lower is better)
Translates to: QFSANSFPKWGN*SQSCFLFPARH
Trigger: ATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTTTGCACTAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 3 (lower is better)
Translates to: SIEFCPDCASIPTLERFLNEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 3 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGNEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 3 (lower is better)
Translates to: QLKESIEFCPDCASIPTLNEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGCGCCATCCACTTGCCTaGACGCTTTCTAAGGCTGGT +
Preference number: 3 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVRHPLA*TLSKAG
Trigger: ACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCG...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGCTTCCATCCCCACCTaGGAAAGGTTCCTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGASIPT*ERFLCC
Trigger: ACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR-3UTR CAA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGGCTGTTTGGACAGATTaGCCCATTCAGCCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVAVWTD*PIQPQD
Trigger: GTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAGC...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR TCA 72 bp TTCTGTTTAATAGTGCACTTCATTTATGCTACAGGATaGGCAGGGTTGGGAAAACACAATGGAAGGTCATCC +
Preference number: 3 (lower is better)
Translates to: FCLIVHFIYATG*AGLGKHNGRSS
Trigger: GGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCATAAATGAAGTGCACTATTAAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR CCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCCCAGCTCCTGGGACTTaGCCTTTAGGAGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: NSGSAILTQQRALLPGSGPAPGT*PLGAQP
Trigger: CGGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGG...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCGAGTGGTCTGGCTCCTaGGGCTGGGTGTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NSGSAILTQQRALLPGSGEWSGS*GWVSEV
Trigger: CACCTCTGACACCCAGCCCCAGGAGCCAGACCACTC...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGGACGACAGATTTaGGGGACCGGACACGGACCA +
Preference number: 4 (lower is better)
Translates to: GKTRGVPSSPSNELCYQAQGRQI*GTGHGP
Trigger: TGGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTG...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTTCTGGCTCCTGGGGCTaGGTGTCAGAGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTSGSWG*VSEVRG
Trigger: CCCTCTCACCTCTGACACCCAGCCCCAGGAGCCAGA...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCGCCATCCACTTGCCTTaGCGCTTTCTAAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: NSGSAILTQQRALLPGSGAIHLP*RFLRLV
Trigger: CACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGC...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCACACCTGTTGCCTCCCTaGGAGCTGGGATTACAGGCG +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPHLLPP*ELGLQA
Trigger: CGCCTGTAATCCCAGCTCTCAGGGAGGCAACAGGTG...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR GCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTCCCAGCAACGAGCTCTaGTACCAGGCTCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTPSNEL*YQAQAQ
Trigger: CTGTGCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGG...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCACCCAGCAACGAGCTCTaGTACCAGGCTCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPPSNEL*YQAQAQ
Trigger: CTGTGCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGG...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAGAGGCAGGAGTGGTCTaGCTCCTGGGGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLEAGVV*LLGLGV
Trigger: GACACCCAGCCCCAGGAGCCAGACCACTCCTGCCTC...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCGTGTGGATCCTCCGATaGAGAATGAGGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: NSGSAILTQQRALLPGSGVWILR*RMRAEL
Trigger: TAGCTCTGCCCTCATTCTGCATCGGAGGATCCACAC...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTACCAGCTCCTGGGACTTaGCCTTTAGGAGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLPAPGT*PLGAQP
Trigger: CGGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGG...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTATCTGGCTCCTGGGGCTaGGTGTCAGAGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLSGSWG*VSEVRG
Trigger: CCCTCTCACCTCTGACACCCAGCCCCAGGAGCCAGA...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTGAGTGGTCTGGCTCCTaGGGCTGGGTGTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTEWSGS*GWVSEV
Trigger: CACCTCTGACACCCAGCCCCAGGAGCCAGACCACTC...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCCCACGGGGAGTCTCTaGTGTGAGATAAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GKTRGVPSSPSNELCYQAPTGSL*CEIRLE
Trigger: TTCCAACCTTATCTCACATCAGAGACTCCCCGTGGG...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTCACTGCTGTCTGTGCTaGCTACGCGGACTCCAACTA +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTHCCLC*LRGLQL
Trigger: TAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTG...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: GKTRGVPSSPSNELCYQAILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: KLGECHPHPATSSATRLRILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCCTGTTTGGACAGATTTaGCCATTCAGCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: NSGSAILTQQRALLPGSGLFGQI*PFSPRT
Trigger: TGTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAG...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTACCCAGCAACGAGCTCTaGTACCAGGCTCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLPSNEL*YQAQAQ
Trigger: CTGTGCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGG...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGGAAAACTCGGGGAGTaGCATCCTCACCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPGKLGE*HPHPAT
Trigger: CGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCC...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGGAGCTTCAGTCAGCATaGGGGCCTCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: VSLNIRGCLRSASSTATWELQSA*GPQLPP
Trigger: TGGTGGGAGCTGAGGCCCGCATGCTGACTGAAGCTC...CCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCATGCTCTCTGGTCTCCTaGGTGCAGACTCAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPCSLVS*VQTQRE
Trigger: TTCCCGCTGAGTCTGCACCCAGGAGACCAGAGAGCA...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR CCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGCCAGCTCCTGGGACTTaGCCTTTAGGAGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSPAPGT*PLGAQP
Trigger: CGGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGG...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACTATCTGGCTCCTGGGGCTaGGTGTCAGAGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NQRPTLSASDPLPHSRLLSGSWG*VSEVRG
Trigger: CCCTCTCACCTCTGACACCCAGCCCCAGGAGCCAGA...TAGTAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCGAGTGGTCTGGCTCCTaGGGCTGGGTGTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SIEFCPDCASIPTLERFLEWSGS*GWVSEV
Trigger: CACCTCTGACACCCAGCCCCAGGAGCCAGACCACTC...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGAGGCAGGAGTGGTCTaGCTCCTGGGGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPEAGVV*LLGLGV
Trigger: GACACCCAGCCCCAGGAGCCAGACCACTCCTGCCTC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTCCCACGGGGAGTCTCTaGTGTGAGATAAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTPTGSL*CEIRLE
Trigger: TTCCAACCTTATCTCACATCAGAGACTCCCCGTGGG...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGACATCAGGGGATGCCTaGGGAGTGCGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FQPQLKPHPPLQNTLGGPTSGDA*GVRAPQ
Trigger: CTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGT...CGGTCCACCAAGTGTGTTCTGTAGTGGAGGGTGAGGTTTGAGCTGTGGCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR GCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGCTCTGGTCTCCTGGGTaGAGACTCAGCGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKLWSPG*RLSGKR
Trigger: CCGCTTCCCGCTGAGTCTGCACCCAGGAGACCAGAG...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR GCA 90 bp ACATCAGCGAGTCCACACTGGAGAGGGAGAAGCACCGTAACTTTCAAGCGCTCCCATGGAAGGGCAAGGTaGTCTCTGGTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSASPHWRGRSTVTFKRSHGRAR*SLVSWV
Trigger: CACCCAGGAGACCAGAGAGCACCTTGCCCTTCCATG...GGAGCGCTTGAAAGTTACGGTGCTTCTCCCTCTCCAGTGTGGACTCGCTGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR GCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTGGCTCAGGCACAGCCTaGCTTCTCTGGGCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTGSGTA*LLWASF
Trigger: AAACGAAGCCCAGAGAAGGCAGGCTGTGCCTGAGCC...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAGGAAAACTCGGGGAGTaGCATCCTCACCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLGKLGE*HPHPAT
Trigger: CGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCC...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTATCTCACTGCCACCTCTaGCTCCCGGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLSHCHL*LPGSSD
Trigger: ATCGCTTGAACCCGGGAGGCAGAGGTGGCAGTGAGA...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CCA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCACAGGGACGACAGATTTaGGGGACCGGACACGGACCA +
Preference number: 4 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPQGRQI*GTGHGP
Trigger: TGGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTG...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACGGGCAAGGTGCTCTCTaGTCTCCTGGGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: QCKDCGKAFSGKGSLIRHGQGAL*SPGCRL
Trigger: GAGTCTGCACCCAGGAGACCAGAGAGCACCTTGCCC...GTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGCCAGCTCCTGGGACTTaGCCTTTAGGAGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKPAPGT*PLGAQP
Trigger: CGGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGG...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCCCAGCTCCTGGGACTTaGCCTTTAGGAGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AKIVARLSAGKAASFVTIPAPGT*PLGAQP
Trigger: CGGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGG...GATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCTTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: NSGSAILTQQRALLPGSGFLLET*SGCSKS
Trigger: GCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAA...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAGAGGCAGGAGTGGTCTaGCTCCTGGGGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITEAGVV*LLGLGV
Trigger: GACACCCAGCCCCAGGAGCCAGACCACTCCTGCCTC...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACTGAAGAGTCAGAGGTaGAGGCAGGAGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLLKSQR*RQEWSG
Trigger: GCCAGACCACTCCTGCCTCCACCTCTGACTCTTCAG...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGTCATCCCGTCGGTTaGGAAAACTCGGGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSGHPVG*ENSGSA
Trigger: GGCACTCCCCGAGTTTTCCCAACCGACGGGATGACC...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTAAGTTTGGGCAACTCTaGTCTTCGGGTAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTKFGQL*SSGSRG
Trigger: TCCCCTGCTACCCGAAGACCAGAGTTGCCCAAACTT...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CCA 90 bp GTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGAGCTCCACAGCAACATaGCAGGCAGGAGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSLNIRGCLRSASSTATWSSTAT*QAGGPQ
Trigger: CTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCT...CCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR GCA 90 bp TGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCTCTGGTCTCCTGGGTaGAGACTCAGCGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: CKDCGKAFSGKGSLIRHYLWSPG*RLSGKR
Trigger: CCGCTTCCCGCTGAGTCTGCACCCAGGAGACCAGAG...ATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR GCA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTCATGGAAGGGCAAGGTaGTCTCTGGTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WSGKRTREDSNQRPTLSAHGRAR*SLVSWV
Trigger: CACCCAGGAGACCAGAGAGCACCTTGCCCTTCCATG...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR GCA 90 bp AATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACTACATGGAAGGGCAAGGTaGTCTCTGGTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NQRPTLSASDPLPHSRLLHGRAR*SLVSWV
Trigger: CACCCAGGAGACCAGAGAGCACCTTGCCCTTCCATG...TAGTAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR GCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAAACTGGTCCCAGAGCTaGTTTCTATTCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPNWSQS*FLFPAR
Trigger: GCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTT...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp CAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACCTCAACATCAGGGGATaGCTGAGGAGTGCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QCKDCGKAFSGKGSLIRHLNIRG*LRSASS
Trigger: GGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAG...GTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTGGGCAAGGTGCTCTCTaGTCTCCTGGGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGGQGAL*SPGCRL
Trigger: GAGTCTGCACCCAGGAGACCAGAGAGCACCTTGCCC...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR CCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCGGGCAAGGTGCTCTCTaGTCTCCTGGGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIGQGAL*SPGCRL
Trigger: GAGTCTGCACCCAGGAGACCAGAGAGCACCTTGCCC...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR CCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCACTTCCATCCCCACCTTaGAAAGGTTCCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPLPSPP*KGSSAV
Trigger: CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAG...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGTTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KLGECHPHPATSSATRLRFLLET*SGCSKS
Trigger: GCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAA...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCATGGCAGGGGGTCTGCTaGCAATATCACCAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPWQGVC*QYHQVS
Trigger: AGAAACCTGGTGATATTGCCAGCAGACCCCCTGCCA...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCGAGTGGTCTGGCTCCTaGGGCTGGGTGTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIEWSGS*GWVSEV
Trigger: CACCTCTGACACCCAGCCCCAGGAGCCAGACCACTC...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCCTGAAGAGTCAGAGGTaGAGGCAGGAGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SIEFCPDCASIPTLERFLLKSQR*RQEWSG
Trigger: GCCAGACCACTCCTGCCTCCACCTCTGACTCTTCAG...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACCACTCGCCAGTTCACTaGAGCAGAGTCCCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: QCKDCGKAFSGKGSLIRHHSPVH*SRVPSP
Trigger: TGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTG...GTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR TCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGTCTCACGATCCAGTaGGAACACATTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPGLTIQ*EHIPVI
Trigger: AATTACGGGAATGTGTTCTCACTGGATCGTGAGACC...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCCACGGGGAGTCTCTaGTGTGAGATAAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTPTGSL*CEIRLE
Trigger: TTCCAACCTTATCTCACATCAGAGACTCCCCGTGGG...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGCACTGCTGTCTGTGCTaGCTACGCGGACTCCAACTA +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSHCCLC*LRGLQL
Trigger: TAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTG...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCACACTGCTGTCTGTGCTaGCTACGCGGACTCCAACTA +
Preference number: 4 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPHCCLC*LRGLQL
Trigger: TAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTG...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGCATGGAAGGGCAAGGTaGTCTCTGGTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKHGRAR*SLVSWV
Trigger: CACCCAGGAGACCAGAGAGCACCTTGCCCTTCCATG...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR GCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTGTGTGGATCCTCCGATaGAGAATGAGGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTVWILR*RMRAEL
Trigger: TAGCTCTGCCCTCATTCTGCATCGGAGGATCCACAC...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTAACTGGTCCCAGAGCTaGTTTCTATTCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTNWSQS*FLFPAR
Trigger: GCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTT...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCGGCTCAGGCACAGCCTaGCTTCTCTGGGCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIGSGTA*LLWASF
Trigger: AAACGAAGCCCAGAGAAGGCAGGCTGTGCCTGAGCC...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGGGCTCAGGCACAGCCTaGCTTCTCTGGGCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKGSGTA*LLWASF
Trigger: AAACGAAGCCCAGAGAAGGCAGGCTGTGCCTGAGCC...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCCCCAGCAACGAGCTCTaGTACCAGGCTCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIPSNEL*YQAQAQ
Trigger: CTGTGCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGG...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCGCAATCTCATCTCACTaGCACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIAISSH*HLCLPG
Trigger: ACCCGGGAGGCAGAGGTGGCAGTGAGATGAGATTGC...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CCA 90 bp TGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCAGGGACGACAGATTTaGGGGACCGGACACGGACCA +
Preference number: 4 (lower is better)
Translates to: CKDCGKAFSGKGSLIRHYQGRQI*GTGHGP
Trigger: TGGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTG...ATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp GCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCTGCTCTCTGGTCTCCTaGGTGCAGACTCAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: AKIVARLSAGKAASFVTICSLVS*VQTQRE
Trigger: TTCCCGCTGAGTCTGCACCCAGGAGACCAGAGAGCA...GATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAGGGCAAGGTGCTCTCTaGTCTCCTGGGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITGQGAL*SPGCRL
Trigger: GAGTCTGCACCCAGGAGACCAGAGAGCACCTTGCCC...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR CCA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTGATCATTTTCAGTCCTaGTCTCACGATCCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GKTRGVPSSPSNELCYQADHFQS*SHDPVR
Trigger: TCTCACTGGATCGTGAGACCAGGACTGAAAATGATC...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCACCTAAATGGGGTAACTaGTCCCAGAGCTGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPPKWGN*SQSCFL
Trigger: TAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTAACTCCTTTCCTAAATaGGGTAACTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTNSFPK*GNWSQS
Trigger: GCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTT...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTATGGCAGGGGGTCTGCTaGCAATATCACCAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLWQGVC*QYHQVS
Trigger: AGAAACCTGGTGATATTGCCAGCAGACCCCCTGCCA...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGGTCATCCCGTCGGTTaGGAAAACTCGGGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLGHPVG*ENSGSA
Trigger: GGCACTCCCCGAGTTTTCCCAACCGACGGGATGACC...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAGGTCATCCCGTCGGTTaGGAAAACTCGGGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITGHPVG*ENSGSA
Trigger: GGCACTCCCCGAGTTTTCCCAACCGACGGGATGACC...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTCAGGATGAGCAGGGTTaGGAAAACACAATGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTQDEQG*ENTMEG
Trigger: ACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTG...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTAGTCAGTCGCAAGTTTaGGCAACTCTGGTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTSQSQV*ATLVFG
Trigger: CCCGAAGACCAGAGTTGCCCAAACTTGCGACTGACT...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303915.10
3UTR CAA 72 bp GGCAGGGGGTCTGCTGGCAATATCACCAGGTTTCTCTaGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: GRGSAGNITRFL*ETWSGCSKSPK
Trigger: TTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGATATTGCCAGCAGACCCCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGTCCACTCCTTCCGGATaGAGTACACAGCTACATCCT +
Preference number: 4 (lower is better)
Translates to: VSLNIRGCLRSASSTATWSTPSG*STQLHP
Trigger: AGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGA...CCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR TCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTTCCACTCCTTCCGGATaGAGTACACAGCTACATCCT +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTSTPSG*STQLHP
Trigger: AGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGA...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTAGCGGCCTTTTCAGACTaGCTTCTCGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLAAFSD*LLVHRL
Trigger: AAGCCTATGAACGAGAAGTCAGTCTGAAAAGGCCGC...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAGCGGCCTTTTCAGACTaGCTTCTCGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLAAFSD*LLVHRL
Trigger: AAGCCTATGAACGAGAAGTCAGTCTGAAAAGGCCGC...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTGCGGCCTTTTCAGACTaGCTTCTCGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTAAFSD*LLVHRL
Trigger: AAGCCTATGAACGAGAAGTCAGTCTGAAAAGGCCGC...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTTCCTCAACTGTCACTTaGCCAAAATCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: GKTRGVPSSPSNELCYQASSTVT*PKSGIF
Trigger: GAAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGA...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGGGTTGGAATTCACAGTaGAGCTGTTCCCAAAATCAT +
Preference number: 4 (lower is better)
Translates to: KLGECHPHPATSSATRLRGWNSQ*SCSQNH
Trigger: ATGATTTTGGGAACAGCTTCACTGTGAATTCCAACC...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTGAGACTCAGGGAAAGTaGGGAAAATGGGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: WSGKRTREDSNQRPTLSAETQGK*GKWVCG
Trigger: GCCACACACCCATTTTCCTCACTTTCCCTGAGTCTC...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCGCCATCCACTTGCCTTaGCGCTTTCTAAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIAIHLP*RFLRLV
Trigger: CACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGC...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAAGTACCCAGGAACAGTaGGAAGAAATGTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPSTQEQ*EEMWQL
Trigger: CAGTTGCCACATTTCTTCTCACTGTTCCTGGGTACT...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR GCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAGGGAGCTTTTGCTCATaGCGATCCCATTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLGSFCS*RSHSKA
Trigger: AGCCTTTGAATGGGATCGGCATGAGCAAAAGCTCCC...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAACTGGTCCCAGAGCTaGTTTCTATTCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVNWSQS*FLFPAR
Trigger: GCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTT...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGGCTCAGGCACAGCCTaGCTTCTCTGGGCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLGSGTA*LLWASF
Trigger: AAACGAAGCCCAGAGAAGGCAGGCTGTGCCTGAGCC...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCGGAAAACTCGGGGAGTaGCATCCTCACCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIGKLGE*HPHPAT
Trigger: CGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCC...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCTATCCTCCCACCTGTTaGCTCCCTGAGAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIYPPTC*LPESWD
Trigger: ATCCCAGCTCTCAGGGAGGCAACAGGTGGGAGGATA...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR GCA 90 bp GTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGGGTCCCAGTAAGCCATaGCAGCATTACCTTTTGCGT +
Preference number: 4 (lower is better)
Translates to: VSLNIRGCLRSASSTATWGPSKP*QHYLLR
Trigger: ACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACC...CCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCGTTGATGCCAATGCCTaGGGGCAGGGACGACAGATT +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIVDANA*GQGRQI
Trigger: AATCTGTCGTCCCTGCCCCCAGGCATTGGCATCAAC...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299667.9
CDS-3UTR CCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGTGCTCTCTGGTCTCCTaGGTGCAGACTCAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLCSLVS*VQTQRE
Trigger: TTCCCGCTGAGTCTGCACCCAGGAGACCAGAGAGCA...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR CCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCACGGTTACTAGCTGTTTaGACAGATTTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPRLLAV*TDLPIQ
Trigger: CTGAATGGGCAAATCTGTCCAAACAGCTAGTAACCG...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACACTGAAGAGTCAGAGGTaGAGGCAGGAGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITLKSQR*RQEWSG
Trigger: GCCAGACCACTCCTGCCTCCACCTCTGACTCTTCAG...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCAGGTCTGGAACTCCTaGGCTCAAGCTATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIQVWNS*AQAILP
Trigger: TGGGAGGATAGCTTGAGCCCAGGAGTTCCAGACCTG...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CCA 90 bp GTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGACTACAGAACACACTTaGTGGACCGGCCCTATGACT +
Preference number: 4 (lower is better)
Translates to: VSLNIRGCLRSASSTATWTTEHT*WTGPMT
Trigger: AGTCATAGGGCCGGTCCACCAAGTGTGTTCTGTAGT...CCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGTTTGAAGGAAGAGCCTaGGGGCAGGGACGACAGATT +
Preference number: 4 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVFEGRA*GQGRQI
Trigger: AATCTGTCGTCCCTGCCCCCAGGCTCTTCCTTCAAA...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412947.6
3UTR CAA 72 bp GGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTaGAAAGCATCCTTACCCAGGCATTTAGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: GERAGQAGQVSS*KASLPRHLEKI
Trigger: GATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGATACGAGATCAGCCTaGGTTTCCATGGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSDTRSA*VSMEGQ
Trigger: TTGCCCTTCCATGGAAACTCAGGCTGATCTCGTATC...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR TCA 90 bp TTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGGATACGAGATCAGCCTaGGTTTCCATGGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: FQPQLKPHPPLQNTLGGPDTRSA*VSMEGQ
Trigger: TTGCCCTTCCATGGAAACTCAGGCTGATCTCGTATC...CGGTCCACCAAGTGTGTTCTGTAGTGGAGGGTGAGGTTTGAGCTGTGGCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR TCA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCATCCACTCCTTCCGGATaGAGTACACAGCTACATCCT +
Preference number: 4 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPSTPSG*STQLHP
Trigger: AGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGA...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGTCCACTCCTTCCGGATaGAGTACACAGCTACATCCT +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSSTPSG*STQLHP
Trigger: AGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGA...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTGGTTGGAATTCACAGTaGAGCTGTTCCCAAAATCAT +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTGWNSQ*SCSQNH
Trigger: ATGATTTTGGGAACAGCTTCACTGTGAATTCCAACC...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGAGACTCAGGGAAAGTaGGGAAAATGGGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPETQGK*GKWVCG
Trigger: GCCACACACCCATTTTCCTCACTTTCCCTGAGTCTC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTTTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: GKTRGVPSSPSNELCYQAFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAAAGGTTCCTCTGCTGTaGGAAAAACAGTTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPKVPLL*EKQFSA
Trigger: TGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTT...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCATTAATCTTCAGCTGCTaGAGAGTCAGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPLIFSC*RVRGGG
Trigger: GCCTCCACCTCTGACTCTTCAGCAGCTGAAGATTAA...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCCAACTAGAATGAGGAAGCACTaGCTGATTCTTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GPRASFPLLSVLTTRTPTRMRKH*LILSFL
Trigger: AAGGAAGGAAAGAATCAGGCAGTGCTTCCTCATTCT...AGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299667.9
CDS-3UTR GCA 90 bp GGCCAAGTGAGCTCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTCTCTGGTCTCCTGGGTaGAGACTCAGCGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GQVSSLKASLPRHLEKIILWSPG*RLSGKR
Trigger: CCGCTTCCCGCTGAGTCTGCACCCAGGAGACCAGAG...AATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR GCA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGGAAACATGGTCTGGCTaGTCCAAGAGCCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVETWSG*SKSPKG
Trigger: TCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTC...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACTACTGTTTGGACAGATTTaGCCATTCAGCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: NQRPTLSASDPLPHSRLLLFGQI*PFSPRT
Trigger: TGTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAG...TAGTAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTCTGTTTGGACAGATTTaGCCATTCAGCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: WSGKRTREDSNQRPTLSALFGQI*PFSPRT
Trigger: TGTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAG...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGCTGTTTGGACAGATTTaGCCATTCAGCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSLFGQI*PFSPRT
Trigger: TGTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAG...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTAGGGTCTCGCTATATTaGCCAGGCAGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGRVSLY*PGRSGT
Trigger: AGTTCCAGACCTGCCTGGGCAATATAGCGAGACCCT...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR GCA 90 bp TTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGGAGGCGCCATATCAGTaGAAAGATTGTGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FQPQLKPHPPLQNTLGGPEAPYQ*KDCGKA
Trigger: AGCCTTGCCACAATCTTTGCACTGATATGGCGCCTC...CGGTCCACCAAGTGTGTTCTGTAGTGGAGGGTGAGGTTTGAGCTGTGGCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGTGCTCTCTGGTCTCCTaGGTGCAGACTCAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVCSLVS*VQTQRE
Trigger: TTCCCGCTGAGTCTGCACCCAGGAGACCAGAGAGCA...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR CCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCTTCCATCCCCACCTTaGAAAGGTTCCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPLPSPP*KGSSAV
Trigger: CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAG...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGCTTCCATCCCCACCTTaGAAAGGTTCCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKLPSPP*KGSSAV
Trigger: CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAG...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTATCACCAGGTTTCTCTTaGAAACATGGTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLSPGFS*KHGLAA
Trigger: AGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGA...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGCAGGGTCCCTTCAATaGTGTCTCAGAGCCAACCAT +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPAGSLQ*CLRANH
Trigger: ATGGTTGGCTCTGAGACACCATTGAAGGGACCCTGC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CCA 90 bp TTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGACAGAACACACTTGGTaGACCGGCCCTATGACTGTA +
Preference number: 4 (lower is better)
Translates to: FQPQLKPHPPLQNTLGGPTEHTW*TGPMTV
Trigger: TACAGTCATAGGGCCGGTCCACCAAGTGTGTTCTGT...CGGTCCACCAAGTGTGTTCTGTAGTGGAGGGTGAGGTTTGAGCTGTGGCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR TCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGCGGCCTTTTCAGACTaGCTTCTCGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPAAFSD*LLVHRL
Trigger: AAGCCTATGAACGAGAAGTCAGTCTGAAAAGGCCGC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCATTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTTAATCTTCAGCTGCTaGAGAGTCAGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGLIFSC*RVRGGG
Trigger: GCCTCCACCTCTGACTCTTCAGCAGCTGAAGATTAA...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGCACTGGCAATCAAGGTaGCACACCTTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLHWQSR*HTFLPP
Trigger: TGGTGGCAAGAAGGTGTGTCACCTTGATTGCCAGTG...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR TCA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAATAGCAAATGTTTGCTaGGGGCTAACTCTATTGCCA +
Preference number: 4 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPIANVC*GLTLLP
Trigger: TGGCAATAGAGTTAGCCCTCAGCAAACATTTGCTAT...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR GCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGGGAGCTTTTGCTCATaGCGATCCCATTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPGSFCS*RSHSKA
Trigger: AGCCTTTGAATGGGATCGGCATGAGCAAAAGCTCCC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTGGGAGCTTTTGCTCATaGCGATCCCATTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGGSFCS*RSHSKA
Trigger: AGCCTTTGAATGGGATCGGCATGAGCAAAAGCTCCC...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAGAAAATTCAACGATTTaGCCCATCTGCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLENSTI*PICPIL
Trigger: GAGAATGGGGCAGATGGGGCAAATCGTTGAATTTTC...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCATTCTGTCCCGACTGTaGTTCCATCCCCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIILSRL*FHPHLG
Trigger: TCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAAT...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTGATCATTTTCAGTCCTaGTCTCACGATCCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTDHFQS*SHDPVR
Trigger: TCTCACTGGATCGTGAGACCAGGACTGAAAATGATC...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGAACTCCTTTCCTAAATaGGGTAACTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSNSFPK*GNWSQS
Trigger: GCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTT...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACGGTTACTAGCTGTTTaGACAGATTTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLRLLAV*TDLPIQ
Trigger: CTGAATGGGCAAATCTGTCCAAACAGCTAGTAACCG...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTCGGTTACTAGCTGTTTaGACAGATTTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTRLLAV*TDLPIQ
Trigger: CTGAATGGGCAAATCTGTCCAAACAGCTAGTAACCG...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTGTTGGGAAAACACAATaGAAGGTCATCCCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: WSGKRTREDSNQRPTLSAVGKTQ*KVIPSV
Trigger: AACCGACGGGATGACCTTCCATTGTGTTTTCCCAAC...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTCAGTGCAAAGATTGTaGCAAGGCTTTCAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: QCKDCGKAFSGKGSLIRHSVQRL*QGFQRE
Trigger: TTCCCGCTGAAAGCCTTGCCACAATCTTTGCACTGA...GTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR TCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGGTCTCACGATCCAGTaGGAACACATTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPGLTIQ*EHIPVI
Trigger: AATTACGGGAATGTGTTCTCACTGGATCGTGAGACC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCATCTTCAGAAATTTCTTaGTCATTTTCAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GWENSGSAILTQQRALLPSSEIS*SFSVLV
Trigger: GACCAGGACTGAAAATGATCAAGAAATTTCTGAAGA...TGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGCACTGCTGTCTGTGCTaGCTACGCGGACTCCAACTA +
Preference number: 4 (lower is better)
Translates to: AVEIYRVRQELLRLRESEHCCLC*LRGLQL
Trigger: TAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTG...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACATTAATCTTCAGCTGCTaGAGAGTCAGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITLIFSC*RVRGGG
Trigger: GCCTCCACCTCTGACTCTTCAGCAGCTGAAGATTAA...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTGAGCTAGTATTTCAGTaGGTACCCAGGAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGELVFQ*VPRNSE
Trigger: CTCACTGTTCCTGGGTACTCACTGAAATACTAGCTC...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR GCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGAACTGGTCCCAGAGCTaGTTTCTATTCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVNWSQS*FLFPAR
Trigger: GCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTT...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAGAAACATGGTCTGGCTaGTCCAAGAGCCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITETWSG*SKSPKG
Trigger: TCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTC...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTACTCCCTTTTGGGCTTTaGTCTTTCTCTGCATTAATC +
Preference number: 4 (lower is better)
Translates to: RGERAGQAGQVSSLKASLLPFGL*SFSALI
Trigger: GATTAATGCAGAGAAAGAGCAAAGCCCAAAAGGGAG...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGCAGGGACGACAGATTTaGGGGACCGGACACGGACCA +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQQGRQI*GTGHGP
Trigger: TGGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTG...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTCCTAAATGGGGTAACTaGTCCCAGAGCTGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGPKWGN*SQSCFL
Trigger: TAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGFLLET*SGCSKS
Trigger: GCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAA...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTCGGTTACTAGCTGTTTaGACAGATTTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: WSGKRTREDSNQRPTLSARLLAV*TDLPIQ
Trigger: CTGAATGGGCAAATCTGTCCAAACAGCTAGTAACCG...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCGTTGGGAAAACACAATaGAAGGTCATCCCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIVGKTQ*KVIPSV
Trigger: AACCGACGGGATGACCTTCCATTGTGTTTTCCCAAC...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CAA 72 bp AGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTaGACGCTTTCTAAGGCTGGTGTGATTTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SCFLFPARHPLA*TLSKAGVISGK
Trigger: TTTCCCAGAAATCACACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGAAAGGCAGGAACTTTTaGAGGAAGAGCACTGTCAAG +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKKGRNF*RKSTVK
Trigger: CTTGACAGTGCTCTTCCTTCAAAAGTTCCTGCCTTT...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR TCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGGTCTCACGATCCAGTaGGAACACATTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLGLTIQ*EHIPVI
Trigger: AATTACGGGAATGTGTTCTCACTGGATCGTGAGACC...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCGGTCTCACGATCCAGTaGGAACACATTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIGLTIQ*EHIPVI
Trigger: AATTACGGGAATGTGTTCTCACTGGATCGTGAGACC...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTTCCTCAACTGTCACTTaGCCAAAATCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: WSGKRTREDSNQRPTLSASSTVT*PKSGIF
Trigger: GAAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGA...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCGGTTGGAATTCACAGTaGAGCTGTTCCCAAAATCAT +
Preference number: 4 (lower is better)
Translates to: SIEFCPDCASIPTLERFLGWNSQ*SCSQNH
Trigger: ATGATTTTGGGAACAGCTTCACTGTGAATTCCAACC...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp AATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACTAATGCTGAATAAGGCCTaGACTGTAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: NQRPTLSASDPLPHSRLLMLNKA*TVGKLS
Trigger: GGAAAGTTTACCTACAGTTCAGGCCTTATTCAGCAT...TAGTAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGATGCTGAATAAGGCCTaGACTGTAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: EQGWENTMEGHPVGWENSMLNKA*TVGKLS
Trigger: GGAAAGTTTACCTACAGTTCAGGCCTTATTCAGCAT...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCATGAAAAGTCTGAGTTaGAAGGGACACATCCTAAGC +
Preference number: 4 (lower is better)
Translates to: SIEFCPDCASIPTLERFLMKSLS*KGHILS
Trigger: GCTTAGGATGTGTCCCTTTCAACTCAGACTTTTCAT...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTTTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCAAGGTTCCTCTGCTGTaGGAAAAACAGTTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SIEFCPDCASIPTLERFLKVPLL*EKQFSA
Trigger: TGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTT...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGCACAGTGGAAAGCACTaGCTCAGGCACAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQHSGKH*LRHKPG
Trigger: GCCTGGCTTGTGCCTGAGTCAGTGCTTTCCACTGTG...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR TCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAAAGAGGGGTCCTGTTTaGAAGTCAGTCGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITKRGPV*KSVASL
Trigger: CAAACTTGCGACTGACTTTCAAACAGGACCCCTCTT...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR TCA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCAACCAACCCTGGATTTaGTCTACCTCTCATTATCTC +
Preference number: 4 (lower is better)
Translates to: SIEFCPDCASIPTLERFLNQPWI*STSHYL
Trigger: GAGATAATGAGAGGTAGATCAAATCCAGGGTTGGTT...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR TCA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCAGGTTTTAAAAGAGAATaGGGAAGCACTGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPGFKRE*GSTAEA
Trigger: TGCTTCTGCAGTGCTTCCTCATTCTCTTTTAAAACC...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR TCA 90 bp GCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCGTGTATCCAGTCCAGTaGGAACACATTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: AKIVARLSAGKAASFVTIVYPVQ*EHIPVI
Trigger: AATTACGGGAATGTGTTCTCACTGGACTGGATACAC...GATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR GCA 90 bp CAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACAGAATGAGGAAGCACTaGCTGATTCTTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QCKDCGKAFSGKGSLIRHRMRKH*LILSFL
Trigger: AAGGAAGGAAAGAATCAGGCAGTGCTTCCTCATTCT...GTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR GCA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGGTGTGGATCCTCCGATaGAGAATGAGGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: AVEIYRVRQELLRLRESEVWILR*RMRAEL
Trigger: TAGCTCTGCCCTCATTCTGCATCGGAGGATCCACAC...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTGAAAATTCAACGATTTaGCCCATCTGCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGENSTI*PICPIL
Trigger: GAGAATGGGGCAGATGGGGCAAATCGTTGAATTTTC...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGGCTTTGCTCTTTCTCTaGATTAATCTTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVALLFL*INLQLL
Trigger: CAGCAGCTGAAGATTAATGCAGAGAAAGAGCAAAGC...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCAAGAAGTCTTGTCATTaGAGCAGCATCGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: AKIVARLSAGKAASFVTIKKSCH*SSIDSG
Trigger: ACCGGAATCGATGCTGCTGCAATGACAAGACTTCTT...GATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGATCATTTTCAGTCCTaGTCTCACGATCCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPDHFQS*SHDPVR
Trigger: TCTCACTGGATCGTGAGACCAGGACTGAAAATGATC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGAACTCCTTTCCTAAATaGGGTAACTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLNSFPK*GNWSQS
Trigger: GCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTT...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGCTTCCATCCCCACCTTaGAAAGGTTCCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: AVEIYRVRQELLRLRESELPSPP*KGSSAV
Trigger: CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAG...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACATCACCAGGTTTCTCTTaGAAACATGGTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITSPGFS*KHGLAA
Trigger: AGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGA...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGGAGGCAGGAGTGGTCTaGCTCCTGGGGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVEAGVV*LLGLGV
Trigger: GACACCCAGCCCCAGGAGCCAGACCACTCCTGCCTC...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGCTGAAGAGTCAGAGGTaGAGGCAGGAGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQLKSQR*RQEWSG
Trigger: GCCAGACCACTCCTGCCTCCACCTCTGACTCTTCAG...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCTCCTCAACTGTCACTTaGCCAAAATCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAISSTVT*PKSGIF
Trigger: GAAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGA...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGGTTGGAATTCACAGTaGAGCTGTTCCCAAAATCAT +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPGWNSQ*SCSQNH
Trigger: ATGATTTTGGGAACAGCTTCACTGTGAATTCCAACC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GGCCAAGTGAGCTCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTCCCACGGGGAGTCTCTaGTGTGAGATAAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GQVSSLKASLPRHLEKIIPTGSL*CEIRLE
Trigger: TTCCAACCTTATCTCACATCAGAGACTCCCCGTGGG...AATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGATGCTGAATAAGGCCTaGACTGTAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKMLNKA*TVGKLS
Trigger: GGAAAGTTTACCTACAGTTCAGGCCTTATTCAGCAT...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCATGAAAAGTCTGAGTTaGAAGGGACACATCCTAAGC +
Preference number: 4 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIMKSLS*KGHILS
Trigger: GCTTAGGATGTGTCCCTTTCAACTCAGACTTTTCAT...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCAAGGTTCCTCTGCTGTaGGAAAAACAGTTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPKVPLL*EKQFSA
Trigger: TGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTT...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAGATCATTTTCAGTCCTaGTCTCACGATCCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITDHFQS*SHDPVR
Trigger: TCTCACTGGATCGTGAGACCAGGACTGAAAATGATC...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGATCTGGCTCCTGGGGCTaGGTGTCAGAGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGSGSWG*VSEVRG
Trigger: CCCTCTCACCTCTGACACCCAGCCCCAGGAGCCAGA...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGGTTGGGAAAACACAATaGAAGGTCATCCCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVVGKTQ*KVIPSV
Trigger: AACCGACGGGATGACCTTCCATTGTGTTTTCCCAAC...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGCAGGATGAGCAGGGTTaGGAAAACACAATGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVQDEQG*ENTMEG
Trigger: ACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTG...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGAAAGGCAGGAACTTTTaGAGGAAGAGCACTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVKGRNF*RKSTVK
Trigger: CTTGACAGTGCTCTTCCTTCAAAAGTTCCTGCCTTT...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR TCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACATCCTCAACTGTCACTTaGCCAAAATCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITSSTVT*PKSGIF
Trigger: GAAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGA...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCATGAAAAGTCTGAGTTaGAAGGGACACATCCTAAGC +
Preference number: 4 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIMKSLS*KGHILS
Trigger: GCTTAGGATGTGTCCCTTTCAACTCAGACTTTTCAT...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGGAAAATTCAACGATTTaGCCCATCTGCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVENSTI*PICPIL
Trigger: GAGAATGGGGCAGATGGGGCAAATCGTTGAATTTTC...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGCTTTGCTCTTTCTCTaGATTAATCTTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLALLFL*INLQLL
Trigger: CAGCAGCTGAAGATTAATGCAGAGAAAGAGCAAAGC...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAAGTGCACTTCATTTATaGTACAGGATGAGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITSALHL*YRMSRV
Trigger: AACCCTGCTCATCCTGTAGCATAAATGAAGTGCACT...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp CAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGAGTGCACTTCATTTATaGTACAGGATGAGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QLKESIEFCPDCASIPTLSALHL*YRMSRV
Trigger: AACCCTGCTCATCCTGTAGCATAAATGAAGTGCACT...CAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
3UTR CAA 72 bp ATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTaGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTA +
Preference number: 4 (lower is better)
Translates to: IEFCPDCASIPT*ERFLCCEKNSL
Trigger: TAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGTCCACTCCTTCCGGATaGAGTACACAGCTACATCCT +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQSTPSG*STQLHP
Trigger: AGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGA...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGTCTTCAGAAATTTCTTaGTCATTTTCAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QSCFLFPARHPLALTLSKSSEIS*SFSVLV
Trigger: GACCAGGACTGAAAATGATCAAGAAATTTCTGAAGA...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGGGGAGCTTTTGCTCATaGCGATCCCATTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQGSFCS*RSHSKA
Trigger: AGCCTTTGAATGGGATCGGCATGAGCAAAAGCTCCC...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGGCTTTGCTCTTTCTCTaGATTAATCTTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVALLFL*INLQLL
Trigger: CAGCAGCTGAAGATTAATGCAGAGAAAGAGCAAAGC...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGGGAAAACTCGGGGAGTaGCATCCTCACCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVGKLGE*HPHPAT
Trigger: CGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCC...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGAGTGCACTTCATTTATaGTACAGGATGAGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVSALHL*YRMSRV
Trigger: AACCCTGCTCATCCTGTAGCATAAATGAAGTGCACT...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACATCTTCAGAAATTTCTTaGTCATTTTCAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SWKHGLAAPRALKDTIITSSEIS*SFSVLV
Trigger: GACCAGGACTGAAAATGATCAAGAAATTTCTGAAGA...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGATGAAAAGTCTGAGTTaGAAGGGACACATCCTAAGC +
Preference number: 4 (lower is better)
Translates to: AVEIYRVRQELLRLRESEMKSLS*KGHILS
Trigger: GCTTAGGATGTGTCCCTTTCAACTCAGACTTTTCAT...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGCCATCCACTTGCCTTaGCGCTTTCTAAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGAIHLP*RFLRLV
Trigger: CACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGC...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGGCCATCCACTTGCCTTaGCGCTTTCTAAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVAIHLP*RFLRLV
Trigger: CACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGC...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGTCACCAGGTTTCTCTTaGAAACATGGTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQSPGFS*KHGLAA
Trigger: AGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGA...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGCAGGATGAGCAGGGTTaGGAAAACACAATGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQQDEQG*ENTMEG
Trigger: ACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTG...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGAGAAAAACAGTTTAGTGTCTTCAGAAATTTCTTaGTCATTTTCAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ASIPTLERFLCCEKNSLVSSEIS*SFSVLV
Trigger: GACCAGGACTGAAAATGATCAAGAAATTTCTGAAGA...CACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGTTTCTAAGGCTGGTGTaGTTTCTGGGAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: AVEIYRVRQELLRLRESEFLRLV*FLGKFN
Trigger: GTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAA...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGGTGTGGATCCTCCGATaGAGAATGAGGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVVWILR*RMRAEL
Trigger: TAGCTCTGCCCTCATTCTGCATCGGAGGATCCACAC...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGGATACGAGATCAGCCTaGGTTTCCATGGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVDTRSA*VSMEGQ
Trigger: TTGCCCTTCCATGGAAACTCAGGCTGATCTCGTATC...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000424697.5
CDS-3UTR TCA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAAGGTTCCTCTGCTGTaGGAAAAACAGTTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQKVPLL*EKQFSA
Trigger: TGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTT...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGTTAATCTTCAGCTGCTaGAGAGTCAGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVLIFSC*RVRGGG
Trigger: GCCTCCACCTCTGACTCTTCAGCAGCTGAAGATTAA...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGAAACATGGTCTGGCTaGTCCAAGAGCCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGETWSG*SKSPKG
Trigger: TCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTC...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGGAAACATGGTCTGGCTaGTCCAAGAGCCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVETWSG*SKSPKG
Trigger: TCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTC...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGTTTCTCTTGGAAACATaGTCTGGCTGCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVFLLET*SGCSKS
Trigger: GCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAAA...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGATCACCAGGTTTCTCTTaGAAACATGGTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGSPGFS*KHGLAA
Trigger: AGCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGA...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTTGGGAAAACACAATaGAAGGTCATCCCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGVGKTQ*KVIPSV
Trigger: AACCGACGGGATGACCTTCCATTGTGTTTTCCCAAC...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGACAGGATGAGCAGGGTTaGGAAAACACAATGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGQDEQG*ENTMEG
Trigger: ACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTG...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR TCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAATGCTGAATAAGGCCTaGACTGTAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGMLNKA*TVGKLS
Trigger: GGAAAGTTTACCTACAGTTCAGGCCTTATTCAGCAT...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGCTTTGCTCTTTCTCTaGATTAATCTTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGALLFL*INLQLL
Trigger: CAGCAGCTGAAGATTAATGCAGAGAAAGAGCAAAGC...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGACTCCCTTTTGGGCTTTaGTCTTTCTCTGCATTAATC +
Preference number: 4 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGLPFGL*SFSALI
Trigger: GATTAATGCAGAGAAAGAGCAAAGCCCAAAAGGGAG...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR GCA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGCTCCCTTTTGGGCTTTaGTCTTTCTCTGCATTAATC +
Preference number: 4 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVLPFGL*SFSALI
Trigger: GATTAATGCAGAGAAAGAGCAAAGCCCAAAAGGGAG...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCTCCCCCAGGCTGTCCTaGTCGGAAAAGGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: NSGSAILTQQRALLPGSGSPRLS*SEKAGT
Trigger: AGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGGA...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGCGCTGTTTGGACAGATTaGCCCATTCAGCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: NSGSAILTQQRALLPGSGAVWTD*PIQPQD
Trigger: GTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAGC...GCCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TTTCAGCCACAGCTCAAACCTCACCCTCCACTACAGAACACACTTGGTGGACCGGCAGGGACGACAGATTaGGGGGACCGGACACGGACC +
Preference number: 5 (lower is better)
Translates to: FQPQLKPHPPLQNTLGGPAGTTD*GDRTRT
Trigger: GGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTGC...CGGTCCACCAAGTGTGTTCTGTAGTGGAGGGTGAGGTTTGAGCTGTGGCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CAA 90 bp AGAGGTGAGAGGGCAGGGCAAGCAGGCCAAGTGAGCTCCTTGAAAGCATCCTTAACCAGCTCCTGGGACTaGGCCTTTAGGAGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: RGERAGQAGQVSSLKASLTSSWD*AFRSAA
Trigger: GGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGGT...TAAGGATGCTTTCAAGGAGCTCACTTGGCCTGCTTGCCCTGCCCTCTCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTACCAGCTCCTGGGACTaGGCCTTTAGGAGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: WSGKRTREDSNQRPTLSATSSWD*AFRSAA
Trigger: GGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGGT...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTACTCTGAGGGAGCTTTaGCTCATGCCGATCCCATTC +
Preference number: 5 (lower is better)
Translates to: GKTRGVPSSPSNELCYQATLREL*LMPIPF
Trigger: GAATGGGATCGGCATGAGCAAAAGCTCCCTCAGAGT...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGAAGTCAGTCGCAAGTTaGGGCAACTCTGGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: KLGECHPHPATSSATRLRKSVAS*GNSGLR
Trigger: CCGAAGACCAGAGTTGCCCAAACTTGCGACTGACTT...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CAA 90 bp AAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTCAGGAAAAGGCAGGAACTTTaGAAGGAAGAGCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: KLGECHPHPATSSATRLRKRQEL*KEEPGG
Trigger: GCCCCCAGGCTCTTCCTTCAAAAGTTCCTGCCTTTT...CCTGAGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412947.6
CDS-3UTR CAA 90 bp TCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCACAGCAGGGACGACAGATTaGGGGGACCGGACACGGACC +
Preference number: 5 (lower is better)
Translates to: SWKHGLAAPRALKDTIITAGTTD*GDRTRT
Trigger: GGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTGC...TGTGATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TTCTCTTGGAAACATGGTCTGGCTGCTCCAAGAGCCCTAAAGGACACCATCATCGCAGGGACGACAGATTaGGGGGACCGGACACGGACC +
Preference number: 5 (lower is better)
Translates to: FSWKHGLAAPRALKDTIIAGTTD*GDRTRT
Trigger: GGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTGC...GATGATGGTGTCCTTTAGGGCTCTTGGAGCAGCCAGACCATGTTTCCAAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTATCCCCCAGGCTGTCCTaGTCGGAAAAGGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLSPRLS*SEKAGT
Trigger: AGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGGA...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGTCCCCCAGGCTGTCCTaGTCGGAAAAGGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: VSLNIRGCLRSASSTATWSPRLS*SEKAGT
Trigger: AGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGGA...CCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CAA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCACCAGCTCCTGGGACTaGGCCTTTAGGAGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAITSSWD*AFRSAA
Trigger: GGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGGT...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCACCAGCTCCTGGGACTaGGCCTTTAGGAGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: AKIVARLSAGKAASFVTITSSWD*AFRSAA
Trigger: GGCTGCGCTCCTAAAGGCCAAGTCCCAGGAGCTGGT...GATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CAA 90 bp TCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCAGGTCATCCCGTCGGTaGGGAAAACTCGGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SIEFCPDCASIPTLERFLRSSRR*GKLGEC
Trigger: GCACTCCCCGAGTTTTCCCAACCGACGGGATGACCT...GAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCAACTCTGAGGGAGCTTTaGCTCATGCCGATCCCATTC +
Preference number: 5 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPTLREL*LMPIPF
Trigger: GAATGGGATCGGCATGAGCAAAAGCTCCCTCAGAGT...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AGCAATCAGAGGCCAACGCTAAGTGCTTCTGACCCTCTCCCTCACAGCCGGTTACGCCATCCACTTGCCTaGACGCTTTCTAAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: SNQRPTLSASDPLPHSRLRHPLA*TLSKAG
Trigger: ACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCG...TAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCCTCTGATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTAGGTCATCCCGTCGGTaGGGAAAACTCGGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGRSSRR*GKLGEC
Trigger: GCACTCCCCGAGTTTTCCCAACCGACGGGATGACCT...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS CCA 90 bp AATGGAAAGGAAAAGGATAAACGGAACCACAGCTCACCTGGGACTTaGCCTTTAGGAGCGCAGCCGCCAACATCTCATCCCCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: NGKEKDKRNHSSPGT*PLGAQPPTSHPPGC
Trigger: ACAGCCTGGGGGATGAGATGTTGGCGGCTGCGCTCCTAAAGGCCAAGTCCCAGGTGAGCTGTGGTTCCGTTTATCCTTTTCCTTTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460331.5
ENST00000466121.1
ENST00000485892.5
ENST00000487620.1
CDS-3UTR CAA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGTCCCCCAGGCTGTCCTaGTCGGAAAAGGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: QSCFLFPARHPLALTLSKSPRLS*SEKAGT
Trigger: AGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGGA...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp ATAACAGGACCCAGAGCGTCCTTTCCACTGCTGTCTGTGCTGACTACGCGGACTACTCTGAGGGAGCTTTaGCTCATGCCGATCCCATTC +
Preference number: 5 (lower is better)
Translates to: ITGPRASFPLLSVLTTRTTLREL*LMPIPF
Trigger: GAATGGGATCGGCATGAGCAAAAGCTCCCTCAGAGT...AGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCAGCTTCCATCCCCACCTaGGAAAGGTTCCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPASIPT*ERFLCC
Trigger: ACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGCTGTTTGGACAGATTaGCCCATTCAGCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: EQGWENTMEGHPVGWENSAVWTD*PIQPQD
Trigger: GTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAGC...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAGGCCAACGCTAAGTGCTGCTGTTTGGACAGATTaGCCCATTCAGCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: WSGKRTREDSNQRPTLSAAVWTD*PIQPQD
Trigger: GTCCTGGGGCTGAATGGGCAAATCTGTCCAAACAGC...AGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGCAGGGTCTCGCTATATaGCCCAGGCAGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: QSCFLFPARHPLALTLSKQGLAI*PRQVWN
Trigger: GTTCCAGACCTGCCTGGGCAATATAGCGAGACCCTG...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CAA 90 bp GGCCAAGTGAGCTCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTGCAGGGACGACAGATTaGGGGGACCGGACACGGACC +
Preference number: 5 (lower is better)
Translates to: GQVSSLKASLPRHLEKIIAGTTD*GDRTRT
Trigger: GGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTGC...AATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299667.9
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp CAGAGCTGCTTTCTATTCCCAGCACGCCATCCACTTGCCTTGACGCTTTCTAAGCGCCATCCACTTGCCTaGACGCTTTCTAAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QSCFLFPARHPLALTLSKRHPLA*TLSKAG
Trigger: ACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCG...CTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTCGCCATCCACTTGCCTaGACGCTTTCTAAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGRHPLA*TLSKAG
Trigger: ACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCG...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGCTTCCATCCCCACCTaGGAAAGGTTCCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPASIPT*ERFLCC
Trigger: ACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GGGAAAACTCGGGGAGTGCCATCCTCACCCAGCAACGAGCTCTGCTACCAGGCTAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 5 (lower is better)
Translates to: GKTRGVPSSPSNELCYQANEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...AGCCTGGTAGCAGAGCTCGTTGCTGGGTGAGGATGGCACTCCCCGAGTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGATCACCAGGTTTCTCTaGGAAACATGGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: EQGWENTMEGHPVGWENSITRFL*ETWSGC
Trigger: GCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGAT...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCAATCACCAGGTTTCTCTaGGAAACATGGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPITRFL*ETWSGC
Trigger: GCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGAT...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCACTACAGAACACACTaGGTGGACCGGCCCTATGAC +
Preference number: 5 (lower is better)
Translates to: CKDCGKAFSGKGSLIRHYHYRTH*VDRPYD
Trigger: GTCATAGGGCCGGTCCACCAAGTGTGTTCTGTAGTG...ATAGTGACGAATGAGGCTGCCTTTCCCGCTGAAAGCCTTGCCACAATCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS CCA 90 bp GAAGAGGGGTCCTGTTTGAAAGTCAGTCGCAAGTTTGGGCAACTCTaGTCTTCGGGTAGCAGGGGATATAGAATGTCCAATACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: EEGSCLKVSRKFGQL*SSGSRGYRMSNTRA
Trigger: GGCTCTGGTATTGGACATTCTATATCCCCTGCTACCCGAAGACCAGAGTTGCCCAAACTTGCGACTGACTTTCAAACAGGACCCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CAA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGTCCCCCAGGCTGTCCTaGTCGGAAAAGGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: AVEIYRVRQELLRLRESESPRLS*SEKAGT
Trigger: AGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGGA...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGGGGAGTGCCATCCTCACCCACTCCTCAACTGTCACTaGACCAAAATCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: NGRSSRRLGKLGECHPHPLLNCH*TKIWHF
Trigger: AAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGAG...TGGGTGAGGATGGCACTCCCCGAGTTTTCCCAACCGACGGGATGACCTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GGCCAAGTGAGCTCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTAGGTCATCCCGTCGGTaGGGAAAACTCGGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: GQVSSLKASLPRHLEKIIRSSRR*GKLGEC
Trigger: GCACTCCCCGAGTTTTCCCAACCGACGGGATGACCT...AATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGAGCTCACTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp ACATCAGCGAGTCCACACTGGAGAGGGAGAAGCACCGTAACTTTCAAGCGCTCCAACCAGAAAGAAGTCTaGTCATTGCAGCAGCATCGA +
Preference number: 5 (lower is better)
Translates to: TSASPHWRGRSTVTFKRSNQKEV*SLQQHR
Trigger: TCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTT...GGAGCGCTTGAAAGTTACGGTGCTTCTCCCTCTCCAGTGTGGACTCGCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CAA 90 bp GAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTTGGGAAAACTCGCTCCTCAACTGTCACTaGACCAAAATCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: EQGWENTMEGHPVGWENSLLNCH*TKIWHF
Trigger: AAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGAG...CGAGTTTTCCCAACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp AATTCTGTCCCGACTGTGCTTCCATCCCCACCTTGGAAAGGTTCCTCTGCTGTGCTCCTCAACTGTCACTaGACCAAAATCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: NSVPTVLPSPPWKGSSAVLLNCH*TKIWHF
Trigger: AAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGAG...CACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGACTCTGAGGGAGCTTTaGCTCATGCCGATCCCATTC +
Preference number: 5 (lower is better)
Translates to: AVEIYRVRQELLRLRESETLREL*LMPIPF
Trigger: GAATGGGATCGGCATGAGCAAAAGCTCCCTCAGAGT...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS GCA 90 bp TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTaGGTAGTTAAACAGACGTGTATCCAGTCCAGTGAGAACACATTC +
Preference number: 5 (lower is better)
Translates to: FATLRVPVSHASITF*VVKQTCIQSSENTF
Trigger: GAATGTGTTCTCACTGGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS-3UTR CAA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTCTCCTCAACTGTCACTaGACCAAAATCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGLLNCH*TKIWHF
Trigger: AAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGAG...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCAAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 5 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPNEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp ATGCTACAGGATGAGCAGGGTTGGGAAAACACAATGGAAGGTCATCCCGTCGGTCAACCAACCCTGGATTaGATCTACCTCTCATTATCT +
Preference number: 5 (lower is better)
Translates to: MLQDEQGWENTMEGHPVGQPTLD*IYLSLS
Trigger: AGATAATGAGAGGTAGATCAAATCCAGGGTTGGTTG...ACCGACGGGATGACCTTCCATTGTGTTTTCCCAACCCTGCTCATCCTGTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS-3UTR CAA 90 bp CCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCCAGTTCGATTAAAGCTCTaGCTACATTCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: PKWGNWSQSCFLFPARHPVRLKL*LHSSHL
Trigger: TAAGTGTGATGAATGTAGCAAGAGCTTTAATCGAAC...TGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 5 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAINEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAAGGTCATCCCGTCGGTaGGGAAAACTCGGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGRSSRR*GKLGEC
Trigger: GCACTCCCCGAGTTTTCCCAACCGACGGGATGACCT...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TTCCTAAATGGGGTAACTGGTCCCAGAGCTGCTTTCTATTCCCAGCACGCCATCGTTCGATTAAAGCTCTaGCTACATTCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: FLNGVTGPRAAFYSQHAIVRLKL*LHSSHL
Trigger: TAAGTGTGATGAATGTAGCAAGAGCTTTAATCGAAC...GATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp CGGACTCCAACTAAAGGAATCCATCGAATTCTGTCCCGACTGTGCTTCCATCCCGTTCGATTAAAGCTCTaGCTACATTCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: RTPTKGIHRILSRLCFHPVRLKL*LHSSHL
Trigger: TAAGTGTGATGAATGTAGCAAGAGCTTTAATCGAAC...GGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS TCA 90 bp CTTCCCAGTAGGACCCCATGTGATCTTGTGTCTTCAGAAATTTCTTaGTCATTTTCAGTCCTGGTCTCACGATCCAGTGAGAACACATTC +
Preference number: 5 (lower is better)
Translates to: LPSRTPCDLVSSEIS*SFSVLVSRSSENTF
Trigger: GAATGTGTTCTCACTGGATCGTGAGACCAGGACTGAAAATGATCAAGAAATTTCTGAAGACACAAGATCACATGGGGTCCTACTGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
ENST00000428683.5
ENST00000441298.5
ENST00000449785.5
ENST00000487620.1
CDS-3UTR CAA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGACGCCATCCACTTGCCTaGACGCTTTCTAAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGRHPLA*TLSKAG
Trigger: ACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCG...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GCTGTTGAGATTTATAGGGTAAGGCAAGAGCTCTTGAGACTCAGGGAAAGTGAGGTTCGATTAAAGCTCTaGCTACATTCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: AVEIYRVRQELLRLRESEVRLKL*LHSSHL
Trigger: TAAGTGTGATGAATGTAGCAAGAGCTTTAATCGAAC...CTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGAGTGATCACCAGGTTTCTCTaGGAAACATGGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LKASLPRHLEKIIFIIGVITRFL*ETWSGC
Trigger: GCAGCCAGACCATGTTTCCAAGAGAAACCTGGTGAT...CACTCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp GAAAATCATTTTCATCATTGGAGTGGGAAGAGGACAAGAGAGGACAGCAATCAGAATGAAAAGTCTGAGTaGAAAGGGACACATCCTAAG +
Preference number: 5 (lower is better)
Translates to: ENHFHHWSGKRTREDSNQNEKSE*KGTHPK
Trigger: CTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATT...CTGATTGCTGTCCTCTCTTGTCCTCTTCCCACTCCAATGATGAAAATGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
CDS-3UTR CAA 90 bp TCCTTGAAAGCATCCTTACCCAGGCATTTAGAGAAAATCATTTTCATCATTGGATCTTTCCTTCCTTCTTaGAAGTCAGTCCCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: SLKASLPRHLEKIIFIIGSFLPS*KSVPRR
Trigger: CCTTCTAGGGACTGACTTCAAAGAAGGAAGGAAAGA...TCCAATGATGAAAATGATTTTCTCTAAATGCCTGGGTAAGGATGCTTTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299667.9
CDS CAA 72 bp AGAATGAGGAAGCACCTGGGGGCAGGGACGACAGATTaGGGGGACCGGACACGGACCAGGCCCTGTTGGACC +
Preference number: 6 (lower is better)
Translates to: RMRKHLGAGTTD*GDRTRTRPCWT
Trigger: GGTCCAACAGGGCCTGGTCCGTGTCCGGTCCCCCAAATCTGTCGTCCCTGCCCCCAGGTGCTTCCTCATTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424697.5
ENST00000449785.5
ENST00000466121.1
CDS CCA 72 bp AGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTaGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RRCQEVPHSPVH*SRVPSPHLGSQ
Trigger: CTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS GCA 72 bp TACGAGATCAGCCTGAGTTTCCATGGAAGGGCAAGGTaGTCTCTGGTCTCCTGGGTGCAGACTCAGCGGGAA +
Preference number: 6 (lower is better)
Translates to: YEISLSFHGRAR*SLVSWVQTQRE
Trigger: TTCCCGCTGAGTCTGCACCCAGGAGACCAGAGAGCACCTTGCCCTTCCATGGAAACTCAGGCTGATCTCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000292393.9
ENST00000299667.9
ENST00000303915.10
ENST00000413658.6
ENST00000415068.1
ENST00000424697.5
ENST00000428683.5
ENST00000449785.5
ENST00000460331.5
ENST00000466121.1
ENST00000479192.1
ENST00000485892.5
CDS CCA 72 bp GAAAAGGATAAACGGAACCACAGCTCACCTGGGACTTaGCCTTTAGGAGCGCAGCCGCCAACATCTCATCCC +
Preference number: 6 (lower is better)
Translates to: EKDKRNHSSPGT*PLGAQPPTSHP
Trigger: GGGATGAGATGTTGGCGGCTGCGCTCCTAAAGGCCAAGTCCCAGGTGAGCTGTGGTTCCGTTTATCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460331.5
ENST00000466121.1
ENST00000485892.5
ENST00000487620.1
CDS CAA 72 bp CCCCCAGGCTGTCCTTGTCGGAAAAGGCAGGAACTTTaGAAGGAAGAGCACTGTCAAGCAGGGCCTGAGGTT +
Preference number: 6 (lower is better)
Translates to: PPGCPCRKRQEL*KEEHCQAGPEV
Trigger: AACCTCAGGCCCTGCTTGACAGTGCTCTTCCTTCAAAAGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000413658.6
ENST00000415068.1
ENST00000424697.5
ENST00000428683.5
ENST00000449785.5
ENST00000460331.5
ENST00000466121.1
ENST00000485892.5
CDS TCA 72 bp TGTCCAATACCAGAGCCCTTACACAGTGGAAAGCACTaGCTCAGGCACAAGCCAGGCCACTGGCAATCAAGG +
Preference number: 6 (lower is better)
Translates to: CPIPEPLHSGKH*LRHKPGHWQSR
Trigger: CCTTGATTGCCAGTGGCCTGGCTTGTGCCTGAGTCAGTGCTTTCCACTGTGTAAGGGCTCTGGTATTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS TCA 72 bp GAATTTAGCAGCCTCTGTTCAAGTTCCCGGGAATTCTaGCTTTTGTTGATGCCAATGCGGCCGGGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: EFSSLCSSSREF*LLLMPMRPGAE
Trigger: CTCCGCGCCCGGCCGCATTGGCATCAACAAAAGTCAGAATTCCCGGGAACTTGAACAGAGGCTGCTAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428683.5
CDS CCA 72 bp AGTTTCCATGGAAGGGCAAGGTGCTCTCTGGTCTCCTaGGTGCAGACTCAGCGGGAAGCGGGTTTTAAAAGA +
Preference number: 6 (lower is better)
Translates to: SFHGRARCSLVS*VQTQREAGFKR
Trigger: TCTTTTAAAACCCGCTTCCCGCTGAGTCTGCACCCAGGAGACCAGAGAGCACCTTGCCCTTCCATGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000292393.9
ENST00000299667.9
ENST00000303915.10
ENST00000413658.6
ENST00000415068.1
ENST00000424697.5
ENST00000428683.5
ENST00000449785.5
ENST00000460331.5
ENST00000466121.1
ENST00000479192.1
ENST00000485892.5
CDS CAA 72 bp CCCCCAGGCTGTCCTTGTCGGAAAAGGCAGGAACTTTaGAAGGAAGAGCTGGTAAGTGAGCGATTTCAATGG +
Preference number: 6 (lower is better)
Translates to: PPGCPCRKRQEL*KEELVSERFQW
Trigger: CCATTGAAATCGCTCACTTACCAGCTCTTCCTTCAAAAGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292393.9
CDS CAA 72 bp CCCCCAGGCTGTCCTTGTCGGAAAAGGCAGGAACTTTaGAAGGAAGAGCTGCCTGATTCTTTCCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: PPGCPCRKRQEL*KEELPDSFLPS
Trigger: AGAAGGAAGGAAAGAATCAGGCAGCTCTTCCTTCAAAAGTTCCTGCCTTTTCCGACAAGGACAGCCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441298.5
CDS GCA 72 bp CTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTaGGTAGTTAAACAGACGTGTATCCAGTCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: LRVPVSHASITF*VVKQTCIQSSE
Trigger: CTCACTGGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413658.6
CDS CCA 72 bp TCCTGTTTGAAAGTCAGTCGCAAGTTTGGGCAACTCTaGTCTTCGGGTAGCAGGGGATATAGAATGTCCAAT +
Preference number: 6 (lower is better)
Translates to: SCLKVSRKFGQL*SSGSRGYRMSN
Trigger: ATTGGACATTCTATATCCCCTGCTACCCGAAGACCAGAGTTGCCCAAACTTGCGACTGACTTTCAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303915.10
CDS CAA 72 bp CTGATATTTAACTCGGTCGTAACTCTGAGGGAGCTTTaGCTCATGCCGATCCCATTCAAAGGCTTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LIFNSVVTLREL*LMPIPFKGFSP
Trigger: TGGAGAGAAGCCTTTGAATGGGATCGGCATGAGCAAAAGCTCCCTCAGAGTTACGACCGAGTTAAATATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
ENST00000487620.1
CDS CAA 90 bp CAGGAACTTTTGAAGGAAGAGCTGCCTGATTCTTTCCTTCCTTCTTaGAAGTCAGTCCCTAGAAGGCCAAAGGAGCAATTACTGGGAATT +
Preference number: 6 (lower is better)
Translates to: QELLKEELPDSFLPS*KSVPRRPKEQLLGI
Trigger: AATTCCCAGTAATTGCTCCTTTGGCCTTCTAGGGACTGACTTCAAAGAAGGAAGGAAAGAATCAGGCAGCTCTTCCTTCAAAAGTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441298.5
CDS TCA 72 bp AGGACCCCATGTGATCTTGTGTCTTCAGAAATTTCTTaGTCATTTTCAGTCCTGGTCTCACGATCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: RTPCDLVSSEIS*SFSVLVSRSSE
Trigger: CTCACTGGATCGTGAGACCAGGACTGAAAATGATCAAGAAATTTCTGAAGACACAAGATCACATGGGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299667.9
ENST00000303915.10
ENST00000412947.6
ENST00000424697.5
ENST00000428683.5
ENST00000441298.5
ENST00000449785.5
ENST00000487620.1
CDS CAA 72 bp CAATCTGCCTCAATTATCAAACCTATCAAGCTGTCATaGATTACTGTTCGGTCAGCTTCCCCACTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: QSASIIKPIKLS*ITVRSASPLGC
Trigger: ACAGCCTAGTGGGGAAGCTGACCGAACAGTAATCAATGACAGCTTGATAGGTTTGATAATTGAGGCAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479192.1