RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF296 (Homo sapiens)

Ensembl gene IDs: ENSG00000170684

Ensembl transcript IDs: ENST00000303809.7, ENST00000622376.1

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp TTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATaGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGG +
Preference number: 3 (lower is better)
Translates to: LLGEGGQKRGGQ*VLAAVPGTVRG
Trigger: CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGCCTTGCGGCGGGACATaGGTCGCGGGCCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GEGGQKRGGQWVLAAVPGPCGGT*VAGRAS
Trigger: GCTCGCCCGGCCCGCGACTCATGTCCCGCCGCAAGG...CCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS-3UTR TCA 90 bp GGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGTGGGGCTCCGCCGGGTaGGGCCGCTGCCACTTGCAC +
Preference number: 4 (lower is better)
Translates to: GGQKRGGQWVLAAVPGTVWGSAG*GRCHLH
Trigger: GTGCAAGTGGCAGCGGCCTCACCCGGCGGAGCCCCA...CACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp ACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCGCGCGCTCAGGTGAGTaGCTGCGGCGACCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: TWRRRAKTRRSMGVGSGTARSGE*LRRPAA
Trigger: CGCGGCGGGTCGCCGCAGTCACTCACCTGAGCGCGC...GGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS-3UTR CCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAGGGCCAGGGGAGTGGTaGGGTTCGCCGCCGAACCGC +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGGPGEW*GSPPNR
Trigger: GCGGTTCGGCGGCGAACCCCACCACTCCCCTGGCCC...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGCGCGGCTGGGGCCTCTaGAGAGCTGACAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GEGGQKRGGQWVLAAVPGRGWGL*RADSPA
Trigger: AGCTGGGCTGTCAGCTCTTCAGAGGCCCCAGCCGCG...CCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAGGGGCCTGTTGGGGCTaGGCGTCTGGCTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGGACWG*ASGSGL
Trigger: CAAGCCCGAGCCAGACGCGCAGCCCCAACAGGCCCC...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGGGGCCTGTTGGGGCTaGGCGTCTGGCTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: AKTRRSMGVGSGTRDSEGGACWG*ASGSGL
Trigger: CAAGCCCGAGCCAGACGCGCAGCCCCAACAGGCCCC...CCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGC
64% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGCACTGCCGACACGGCTaGAGCCACCTCGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KAGKNEEVNGCWQRYQGQHCRHG*SHLGQA
Trigger: GGCCTGGCCGAGGTGGCTGCAGCCGTGTCGGCAGTG...CTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGCGCAGAACTCACAGCTaGCCCCGGGCCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: AKTRRSMGVGSGTRDSEGRRTHS*PRARGS
Trigger: AGAGCCGCGGGCCCGGGGGCAGCTGTGAGTTCTGCG...CCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGTGCTGCCAGGCGTCATaGCGTGCATGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGQKRGGQWVLAAVPGTVCCQAS*RACGGG
Trigger: GCCACCGCCGCATGCACGGCATGACGCCTGGCAGCA...CACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGAAGGGCCCCAGCCTTaGGGCCTGTTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GQKRGGQWVLAAVPGTVREGPQP*GLLGLR
Trigger: GCGCAGCCCCAACAGGCCCCAAGGCTGGGGCCCTTC...CCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAGTGGGGGCAGCAGCATaGACAGCCGGCTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGVGAAA*TAGSGG
Trigger: CCCTCCGGAGCCGGCTGTCCATGCTGCTGCCCCCAC...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAGGAGCCCCGGGTTCCTaGACACCTGCTGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGGAPGS*TPAVAA
Trigger: CGCCGCCACAGCAGGTGTCCAGGAACCCGGGGCTCC...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGCGCGGCTGGGGCCTCTaGAGAGCTGACAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AKTRRSMGVGSGTRDSEGRGWGL*RADSPA
Trigger: AGCTGGGCTGTCAGCTCTTCAGAGGCCCCAGCCGCG...CCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGTGGTCCCACTGGGCGTaGCGCAGCAGCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGWSHWA*RSSFQA
Trigger: GGCCTGGAAGCTGCTGCGTCACGCCCAGTGGGACCA...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGTGGTCCCACTGGGCGTaGCGCAGCAGCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AKTRRSMGVGSGTRDSEGWSHWA*RSSFQA
Trigger: GGCCTGGAAGCTGCTGCGTCACGCCCAGTGGGACCA...CCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGTGCTGGCCCCACCACTaGCGACACGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGCWPHH*RHGCSH
Trigger: GTGGCTGCAGCCGTGTCGGCAGTGGTGGGGCCAGCA...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGGAGGCCGCTGCCACTTaGACGGGGGCTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGEAAAT*TGALGL
Trigger: GAGGCCAAGAGCCCCCGTGCAAGTGGCAGCGGCCTC...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGAGGCCGCTGCCACTTaGACGGGGGCTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RAKTRRSMGVGSGTRDSEEAAAT*TGALGL
Trigger: GAGGCCAAGAGCCCCCGTGCAAGTGGCAGCGGCCTC...CTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGTTCCTGGACACCTaGTGTGGCGGCGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQKRGGQWVLAAVPGTVRGFLDT*CGGGSS
Trigger: GCTGGAGCCGCCGCCACAGCAGGTGTCCAGGAACCC...CCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGTTCCTGGACACCTaGTGTGGCGGCGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RAKTRRSMGVGSGTRDSEGFLDT*CGGGSS
Trigger: GCTGGAGCCGCCGCCACAGCAGGTGTCCAGGAACCC...CTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACGGCTTGAGCCCCACTaGCAGGAGCCCCGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGRLEPH*QEPRVP
Trigger: AGGAACCCGGGGCTCCTGGCAGTGGGGCTCAAGCCG...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGGGCACTCGAAGCGGGTaGTGCCAGGCGTCATGCCGT +
Preference number: 4 (lower is better)
Translates to: GEGGQKRGGQWVLAAVPGGTRSG*CQASCR
Trigger: ACGGCATGACGCCTGGCAGCACCCGCTTCGAGTGCC...CCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp CGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGTCTCGTCGTCTGGGTTaGCGGCGGGCGCGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RAKTRRSMGVGSGTRDSESRRLG*RRARAL
Trigger: TAGAGCCCGCGCCCGCCGCCAACCCAGACGACGAGA...CTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS-3UTR CCA 90 bp TGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGTCTCGTTCTGAGCCCTaGCCGCGGCTGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: WRRRAKTRRSMGVGSGTRSRSEP*PRLGPL
Trigger: CAGAGGCCCCAGCCGCGGCCAGGGCTCAGAACGAGA...CCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGTTGCACGGGGGCTCTTaGCCTCAGCTGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGQKRGGQWVLAAVPGTVLHGGS*PQLLAP
Trigger: TGGGGCCAGCAGCTGAGGCCAAGAGCCCCCGTGCAA...CACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCACTGCCGACACGGCTaGAGCCACCTCGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYHCRHG*SHLGQA
Trigger: GGCCTGGCCGAGGTGGCTGCAGCCGTGTCGGCAGTG...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACACCCCCTCACCACCGCTaGATGGAAGGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EGGQKRGGQWVLAAVPGTPPHHR*MEGCWW
Trigger: CCACCAGCACCCTTCCATGCAGCGGTGGTGAGGGGG...TGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCATGCTGCCAGGCGTCATaGCGTGCATGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPCCQAS*RACGGG
Trigger: GCCACCGCCGCATGCACGGCATGACGCCTGGCAGCA...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACTCGAAGCGGGTGCTaGCAGGCGTCATGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: GEGGQKRGGQWVLAAVPGTRSGC*QASCRA
Trigger: TGCACGGCATGACGCCTGGCAGCACCCGCTTCGAGT...CCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGGCACTCGAAGCGGGTaGTGCCAGGCGTCATGCCGT +
Preference number: 4 (lower is better)
Translates to: AKTRRSMGVGSGTRDSEGGTRSG*CQASCR
Trigger: ACGGCATGACGCCTGGCAGCACCCGCTTCGAGTGCC...CCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGCTCAGGTGAGTGACTaGGGCGACCCGCCGCGAACT +
Preference number: 4 (lower is better)
Translates to: WRRRAKTRRSMGVGSGTRAQVSD*GDPPRT
Trigger: AGTTCGCGGCGGGTCGCCGCAGTCACTCACCTGAGC...CCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS-3UTR CCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAGGCGGCACCTGCCGGTaGGTCTTCTTGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGGGTCR*VFLWRL
Trigger: CAACCGCCACAAGAAGACCCACCGGCAGGTGCCGCC...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTGCCATGAGGGGGCTCTaGGGCGGCACCTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FTWRRRAKTRRSMGVGSGAMRGL*GGTCRW
Trigger: CCACCGGCAGGTGCCGCCCCAGAGCCCCCTCATGGC...ACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp CGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGCTCACCACCGCTGCATaGAAGGGTGCTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RAKTRRSMGVGSGTRDSELTTAA*KGAGGG
Trigger: GCCCCCACCAGCACCCTTCCATGCAGCGGTGGTGAG...CTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAAGGGCACATGGCAGTaGGGGCACTCGAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GGQKRGGQWVLAAVPGTVKGTWQ*GHSKRV
Trigger: CACCCGCTTCGAGTGCCCCCACTGCCATGTGCCCTT...CACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCACTCTGGGGCGGCACCTaGCGGTGGGTCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPLWGGT*RWVFLW
Trigger: CCACAAGAAGACCCACCGGCAGGTGCCGCCCCAGAG...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGGTGTGTGAGCGCCGGTaGACCGTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGVCERR*TVRLLL
Trigger: CAGCAGCAACCTGACGGTGCACCGGCGCTCACACAC...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACTCTCGTTCTGAGCCCTaGCCGCGGCTGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYSRSEP*PRLGPL
Trigger: CAGAGGCCCCAGCCGCGGCCAGGGCTCAGAACGAGA...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGCTTGGCCTCAGCTGCTaGCCCCACCACTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: LEKAGKNEEVNGCWQRYQLGLSC*PHHCRH
Trigger: GTGTCGGCAGTGGTGGGGCCAGCAGCTGAGGCCAAG...CTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTAGGAGCCCCGGGTTCCTaGACACCTGCTGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LLGEGGQKRGGQWVLAAVGAPGS*TPAVAA
Trigger: CGCCGCCACAGCAGGTGTCCAGGAACCCGGGGCTCC...TACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp CGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGCCTCTGAAGAGCTaGCAGCCCAGCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RAKTRRSMGVGSGTRDSEGPLKS*QPSFLW
Trigger: CCACAAGAAGCTGGGCTGTCAGCTCTTCAGAGGCCC...CTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCTGGGGCTCCGCCGGGTaGGGCCGCTGCCACTTGCAC +
Preference number: 4 (lower is better)
Translates to: GKFTWRRRAKTRRSMGVGWGSAG*GRCHLH
Trigger: GTGCAAGTGGCAGCGGCCTCACCCGGCGGAGCCCCA...GCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGCCGCTCGCCTGTGTGTaGGCGCATGTGCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGPLACV*AHVHFE
Trigger: CTCAAAGTGCACATGCGCTCACACACAGGCGAGCGG...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTCGGGCCCGCGGCTCTTaGCCCCTGACTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: FTWRRRAKTRRSMGVGSGRARGS*PLTWAS
Trigger: AGATGCCCAAGTCAGGGGGCAAGAGCCGCGGGCCCG...ACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACGGGCCCGCGGCTCTTaGCCCCTGACTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LLGEGGQKRGGQWVLAAVRARGS*PLTWAS
Trigger: AGATGCCCAAGTCAGGGGGCAAGAGCCGCGGGCCCG...TACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGGCCAGGGGAGTGGTaGGGTTCGCCGCCGAACCGC +
Preference number: 4 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSGPGEW*GSPPNR
Trigger: GCGGTTCGGCGGCGAACCCCACCACTCCCCTGGCCC...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGGCCATGAGGGGGCTCTaGGGCGGCACCTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWAMRGL*GGTCRW
Trigger: CCACCGGCAGGTGCCGCCCCAGAGCCCCCTCATGGC...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCTCACCACCGCTGCATaGAAGGGTGCTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYLTTAA*KGAGGG
Trigger: GCCCCCACCAGCACCCTTCCATGCAGCGGTGGTGAG...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGTTCCATCTCGTCGTCTaGGTTGGGACGCACGAGCGG +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGFHLVV*VGTHER
Trigger: CCGCTCGTGCGTCCCAACCCAGACGACGAGATGGAA...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS-3UTR TCA 90 bp CGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGCTTCCAGGCCACTGTaGACTGTTTGCCACAGCGCA +
Preference number: 4 (lower is better)
Translates to: RAKTRRSMGVGSGTRDSEASRPL*TVCHSA
Trigger: TGCGCTGTGGCAAACAGTTCACAGTGGCCTGGAAGC...CTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGCCGTGCGCGCTCAGGTaGGTGACTGCGGCGACCCGC +
Preference number: 4 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLPCALR*VTAATR
Trigger: GCGGGTCGCCGCAGTCACTCACCTGAGCGCGCACGG...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS-3UTR GCA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCCGCAGAACTCACAGCTaGCCCCGGGCCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSRRTHS*PRARGS
Trigger: AGAGCCGCGGGCCCGGGGGCAGCTGTGAGTTCTGCG...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp ATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGGCGAACTCTTACACGTaGTGGCCGGGCCCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IYLEKAGKNEEVNGCWQRANSYT*WPGPWL
Trigger: GAGCCACGGGCCCGGCCAGCACGTGTAAGAGTTCGC...CCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS-3UTR CCA 90 bp TTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTCTTGGCCTCAGCTGCTaGCCCCACCACTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: FTWRRRAKTRRSMGVGSGLGLSC*PHHCRH
Trigger: GTGTCGGCAGTGGTGGGGCCAGCAGCTGAGGCCAAG...ACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCCTGGACACCTGCTGTaGCGGCGGCTCCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWPGHLL*RRLQPP
Trigger: AGGGGGCTGGAGCCGCCGCCACAGCAGGTGTCCAGG...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCCGTGCATGCGGCGGTaGCGGTTGAGCTTACTGCTC +
Preference number: 4 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYPCMRR*RLSLLL
Trigger: GAGCAGTAAGCTCAACCGCCACCGCCGCATGCACGG...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp ATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGAACTCTTACACGTGCTaGCCGGGCCCGTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: IYLEKAGKNEEVNGCWQRNSYTC*PGPWLR
Trigger: GCGGAGCCACGGGCCCGGCCAGCACGTGTAAGAGTT...CCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS-3UTR TCA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACGGGCCTCTGAAGAGCTaGCAGCCCAGCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYGPLKS*QPSFLW
Trigger: CCACAAGAAGCTGGGCTGTCAGCTCTTCAGAGGCCC...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGTCCAACGGGAAGGTCTaGAGGCAGCGGCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: NLLGEGGQKRGGQWVLAASNGKV*RQRPQV
Trigger: GACCTGCGGCCGCTGCCTGCAGACCTTCCCGTTGGA...CGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCCGGCTTGAGCCCCACTaGCAGGAGCCCCGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GKFTWRRRAKTRRSMGVGRLEPH*QEPRVP
Trigger: AGGAACCCGGGGCTCCTGGCAGTGGGGCTCAAGCCG...GCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCCCAGGCGTCATGCCGTaGATGCGGCGGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSPGVMP*MRRWRL
Trigger: CAACCGCCACCGCCGCATGCACGGCATGACGCCTGG...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTAACTCGAAGCGGGTGCTaGCAGGCGTCATGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: LLGEGGQKRGGQWVLAAVTRSGC*QASCRA
Trigger: TGCACGGCATGACGCCTGGCAGCACCCGCTTCGAGT...TACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGAAGGGCCCCAGCCTTaGGGCCTGTTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLEGPQP*GLLGLR
Trigger: GCGCAGCCCCAACAGGCCCCAAGGCTGGGGCCCTTC...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGCAGGTCAACAGATCTaGGTGTTTGTCGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AKTRRSMGVGSGTRDSEGAGQQI*VFVGPG
Trigger: CCCTGGACCGACAAACACCCAGATCTGTTGACCTGC...CCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAGCAGGTCAACAGATCTaGGTGTTTGTCGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGAGQQI*VFVGPG
Trigger: CCCTGGACCGACAAACACCCAGATCTGTTGACCTGC...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGTGGGGGCAGCAGCATaGACAGCCGGCTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLVGAAA*TAGSGG
Trigger: CCCTCCGGAGCCGGCTGTCCATGCTGCTGCCCCCAC...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCCTGGACACCTGCTGTaGCGGCGGCTCCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KIYLEKAGKNEEVNGCWQPGHLL*RRLQPP
Trigger: AGGGGGCTGGAGCCGCCGCCACAGCAGGTGTCCAGG...CTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTAGGCCGAAGGGCACATaGCAGTGGGGGCACTCGAAG +
Preference number: 4 (lower is better)
Translates to: FTWRRRAKTRRSMGVGSGRPKGT*QWGHSK
Trigger: CTTCGAGTGCCCCCACTGCCATGTGCCCTTCGGCCT...ACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACATTCTTTGTTCCGTGGTaGTGGCTCCCCAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: EGGQKRGGQWVLAAVPGTFFVPW*WLPKCL
Trigger: GAGACACTTGGGGAGCCATCACCACGGAACAAAGAA...TGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGTGCTGGCCCCACCACTaGCGACACGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KIYLEKAGKNEEVNGCWQCWPHH*RHGCSH
Trigger: GTGGCTGCAGCCGTGTCGGCAGTGGTGGGGCCAGCA...CTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCTCTGGGGCGGCACCTaGCGGTGGGTCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWLWGGT*RWVFLW
Trigger: CCACAAGAAGACCCACCGGCAGGTGCCGCCCCAGAG...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGTTCCATCTCGTCGTCTaGGTTGGCGGCGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: KIYLEKAGKNEEVNGCWQFHLVV*VGGGRG
Trigger: CCCGCGCCCGCCGCCAACCCAGACGACGAGATGGAA...CTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS-3UTR CCA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGAGCCTTGGGGCCTGTTaGGGCTGCGCGTCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLSLGAC*GCASGS
Trigger: CGAGCCAGACGCGCAGCCCCAACAGGCCCCAAGGCT...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGTTGCACGGGGGCTCTTaGCCTCAGCTGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWLHGGS*PQLLAP
Trigger: TGGGGCCAGCAGCTGAGGCCAAGAGCCCCCGTGCAA...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAAAACGAGGAGGTCAATaGGTGTTGGCAGCGGTACCA +
Preference number: 4 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGKRGGQ*VLAAVP
Trigger: TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTT...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp TTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGGCATCTTTTTGGGTaGTGCCTTCTGGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LEKAGKNEEVNGCWQRYQGHLFG*CLLAVC
Trigger: GCAAACAGCCAGAAGGCATCACCCAAAAAGATGCCC...CTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGTGTGTGAGCGCATGTaGACTTTGAGGTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WRRRAKTRRSMGVGSGTRVCERM*TLRLLK
Trigger: CTTCAGCAACCTCAAAGTGCACATGCGCTCACACAC...CCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGGTGTGTGAGCGCCGGTaGACCGTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWVCERR*TVRLLL
Trigger: CAGCAGCAACCTGACGGTGCACCGGCGCTCACACAC...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTAGGGCGCAGGCGTAGTTaGAGAACTCACAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLGEGGQKRGGQWVLAAVGRRRS*RTHRCR
Trigger: CCTACACCTGTGAGTTCTGCAACTACGCCTGCGCCC...TACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTCCAGGCGTCATGCCGTaGATGCGGCGGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: KGKIYLEKAGKNEEVNGCPGVMP*MRRWRL
Trigger: CAACCGCCACCGCCGCATGCACGGCATGACGCCTGG...ACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCACAGCCCAGCTTCTTGTaGTCCATGAAGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPQPSFL*SMKAVM
Trigger: CATCACTGCCTTCATGGACCACAAGAAGCTGGGCTG...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACATTCTGTCTGGTAGATaGACAGTCCGTGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: RRRAKTRRSMGVGSGTRDILSGR*TVRGPT
Trigger: AGTGGGACCACGGACTGTCCATCTACCAGACAGAAT...GTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGGCGGCACCTGCCGGTaGGTCTTCTTGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAGGTCR*VFLWRL
Trigger: CAACCGCCACAAGAAGACCCACCGGCAGGTGCCGCC...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTTTGGGTGATGCCTTCTaGCTGTTTGCAGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: RRAKTRRSMGVGSGTRDSLGDAF*LFAGSV
Trigger: AACTGACCCTGCAAACAGCCAGAAGGCATCACCCAA...ACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGTCTTGCCCCCTGACTTaGGCATCTTTTTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGSCPLT*ASFWVM
Trigger: CATCACCCAAAAAGATGCCCAAGTCAGGGGGCAAGA...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCCGTGCATGCGGCGGTaGCGGTTGAGCTTACTGCTC +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWPCMRR*RLSLLL
Trigger: GAGCAGTAAGCTCAACCGCCACCGCCGCATGCACGG...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAAGGGCACATGGCAGTaGGGGCACTCGAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GKFTWRRRAKTRRSMGVGKGTWQ*GHSKRV
Trigger: CACCCGCTTCGAGTGCCCCCACTGCCATGTGCCCTT...GCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGAGGCCGAAGGGCACATaGCAGTGGGGGCACTCGAAG +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWRPKGT*QWGHSK
Trigger: CTTCGAGTGCCCCCACTGCCATGTGCCCTTCGGCCT...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp AATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGCTTCCAGGCCACTGTaGACTGTTTGCCACAGCGCA +
Preference number: 4 (lower is better)
Translates to: NLLGEGGQKRGGQWVLAAASRPL*TVCHSA
Trigger: TGCGCTGTGGCAAACAGTTCACAGTGGCCTGGAAGC...CGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCGGCCTCCGGGGCCTCTaGTTCTGTCTGGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: GKFTWRRRAKTRRSMGVGGLRGL*FCLVDG
Trigger: TCCATCTACCAGACAGAATCAGAGGCCCCGGAGGCC...GCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACTTCTTTGTTCCGTGGTaGTGGCTCCCCAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYFFVPW*WLPKCL
Trigger: GAGACACTTGGGGAGCCATCACCACGGAACAAAGAA...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTCCAACGGGAAGGTCTaGAGGCAGCGGCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KGKIYLEKAGKNEEVNGCSNGKV*RQRPQV
Trigger: GACCTGCGGCCGCTGCCTGCAGACCTTCCCGTTGGA...ACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTCCCCCTCACCACCGCTaGATGGAAGGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KGKFTWRRRAKTRRSMGVPPHHR*MEGCWW
Trigger: CCACCAGCACCCTTCCATGCAGCGGTGGTGAGGGGG...AACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp CAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGGGCTGCTGTTGGTAAAATaGTTCCCGCAGAACTCACAG +
Preference number: 4 (lower is better)
Translates to: QKRGGQWVLAAVPGTVRGLLLVK*FPQNSQ
Trigger: CTGTGAGTTCTGCGGGAAGCATTTTACCAACAGCAG...CCCCCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGCCTCAGGGTGCTTCTaGCGCAGGTGTTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSASGCF*RRCLSR
Trigger: CCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGC...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGTTGGGGCTGCGCGTCTaGCTCGGGCTTGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWLGLRV*LGLEFD
Trigger: ATCGAACTCAAGCCCGAGCCAGACGCGCAGCCCCAA...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCTTGGGGCTGCGCGTCTaGCTCGGGCTTGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: GKFTWRRRAKTRRSMGVGLGLRV*LGLEFD
Trigger: ATCGAACTCAAGCCCGAGCCAGACGCGCAGCCCCAA...GCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACACTTGGGCATCTTTTTaGGTGATGCCTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RRRAKTRRSMGVGSGTRDTWASF*VMPSGC
Trigger: ACAGCCAGAAGGCATCACCCAAAAAGATGCCCAAGT...GTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGGTGTTTGTCCAGGGTaGCTCGCAGGCCGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAGVCPG*LAGRRA
Trigger: TGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACC...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGAGGTCAATGGGTGTTaGCAGCGGTACCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: NLLGEGGQKRGGQWVLAAEVNGC*QRYQGQ
Trigger: CTGTCCCTGGTACCGCTGCCAACACCCATTGACCTC...CGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCACCGCTCGCCTGTGTGTaGGCGCATGTGCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAPLACV*AHVHFE
Trigger: CTCAAAGTGCACATGCGCTCACACACAGGCGAGCGG...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCCTCAGGGTGCTTCTaGCGCAGGTGTTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAASGCF*RRCLSR
Trigger: CCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGC...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGTGTTTGTCCAGGGTaGCTCGCAGGCCGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KGKFTWRRRAKTRRSMGVGVCPG*LAGRRA
Trigger: TGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACC...AACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp AAAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTGGCCTCCGGGGCCTCTaGTTCTGTCTGGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: KGKIYLEKAGKNEEVNGCGLRGL*FCLVDG
Trigger: TCCATCTACCAGACAGAATCAGAGGCCCCGGAGGCC...ACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACACTTGGGCATCTTTTTaGGTGATGCCTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYTWASF*VMPSGC
Trigger: ACAGCCAGAAGGCATCACCCAAAAAGATGCCCAAGT...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGAGGTCAATGGGTGTTaGCAGCGGTACCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLEVNGC*QRYQGQ
Trigger: CTGTCCCTGGTACCGCTGCCAACACCCATTGACCTC...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGAAACGAGGAGGTCAATaGGTGTTGGCAGCGGTACCA +
Preference number: 4 (lower is better)
Translates to: NLLGEGGQKRGGQWVLAAKRGGQ*VLAAVP
Trigger: TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTT...CGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp TTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACTGCTGTTGGTAAAATaGTTCCCGCAGAACTCACAG +
Preference number: 4 (lower is better)
Translates to: LLGEGGQKRGGQWVLAAVLLLVK*FPQNSQ
Trigger: CTGTGAGTTCTGCGGGAAGCATTTTACCAACAGCAG...TACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTGGGCGCAGGCGTAGTTaGAGAACTCACAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KGKIYLEKAGKNEEVNGCGRRRS*RTHRCR
Trigger: CCTACACCTGTGAGTTCTGCAACTACGCCTGCGCCC...ACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCCAGCCCAGCTTCTTGTaGTCCATGAAGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSQPSFL*SMKAVM
Trigger: CATCACTGCCTTCATGGACCACAAGAAGCTGGGCTG...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAAAGGGAAAATTTACTTaGAGAAGGCGGGCAAAAACG +
Preference number: 4 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPKGKFT*RRRAKT
Trigger: CGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTT...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR TCA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGGGCATCTTTTTGGGTaGTGCCTTCTGGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAGHLFG*CLLAVC
Trigger: GCAAACAGCCAGAAGGCATCACCCAAAAAGATGCCC...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCTCGATGACGAGGTCCTaGATTTCCATCTCGTCGTCT +
Preference number: 4 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSSMTRS*ISISSS
Trigger: AGACGACGAGATGGAAATGCAGGACCTCGTCATCGA...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGTGTGTGAGCGCATGTaGACTTTGAGGTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAVCERM*TLRLLK
Trigger: CTTCAGCAACCTCAAAGTGCACATGCGCTCACACAC...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGTGCCTTCTGGCTGTTTaGAGGGTCAGTTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWCLLAV*RVSSLF
Trigger: GAACAAAGAACTGACCCTGCAAACAGCCAGAAGGCA...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGTTGGGTGATGCCTTCTaGCTGTTTGCAGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLLGDAF*LFAGSV
Trigger: AACTGACCCTGCAAACAGCCAGAAGGCATCACCCAA...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGTCTTGCCCCCTGACTTaGGCATCTTTTTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: KIYLEKAGKNEEVNGCWQSCPLT*ASFWVM
Trigger: CATCACCCAAAAAGATGCCCAAGTCAGGGGGCAAGA...CTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR GCA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGTGCCTTCTGGCTGTTTaGAGGGTCAGTTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLCLLAV*RVSSLF
Trigger: GAACAAAGAACTGACCCTGCAAACAGCCAGAAGGCA...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTATTCTGTCTGGTAGATaGACAGTCCGTGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: KGKFTWRRRAKTRRSMGVILSGR*TVRGPT
Trigger: AGTGGGACCACGGACTGTCCATCTACCAGACAGAAT...AACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CCA 90 bp AAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTAAGGGAAAATTTACTTaGAGAAGGCGGGCAAAAACG +
Preference number: 4 (lower is better)
Translates to: KGKFTWRRRAKTRRSMGVKGKFT*RRRAKT
Trigger: CGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTT...AACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 90 bp CTGCGGCGACCCGCCGCGAACTCTTACACGTGCTGGCCGGGCCCGTaGCTCCGCCTACCAGGGCGGGGCTCATGGGAGGGGACCGAGCCG +
Preference number: 5 (lower is better)
Translates to: LRRPAANSYTCWPGP*LRLPGRGSWEGTEP
Trigger: CGGCTCGGTCCCCTCCCATGAGCCCCGCCCTGGTAGGCGGAGCCACGGGCCCGGCCAGCACGTGTAAGAGTTCGCGGCGGGTCGCCGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS TCA 90 bp GGACGCACGAGCGGAGGACGCGCGGACCGTGCGCGCTCAGGTGAGTaGCTGCGGCGACCCGCCGCGAACTCTTACACGTGCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: GRTSGGRADRARSGE*LRRPAANSYTCWPG
Trigger: GCCCGGCCAGCACGTGTAAGAGTTCGCGGCGGGTCGCCGCAGTCACTCACCTGAGCGCGCACGGTCCGCGCGTCCTCCGCTCGTGCGTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS GCA 90 bp CCGGGTGAGGCCGCTGCCACTTGCACGGGGGCTCTTGGCCTCAGCTaGTGGCCCCACCACTGCCGACACGGCTGCAGCCACCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: PGEAAATCTGALGLS*WPHHCRHGCSHLGQ
Trigger: CTGGCCGAGGTGGCTGCAGCCGTGTCGGCAGTGGTGGGGCCAGCAGCTGAGGCCAAGAGCCCCCGTGCAAGTGGCAGCGGCCTCACCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 90 bp GCACGAGCGGAGGACGCGCGGACCGTGCGCGCTCAGGTGAGTGACTaGGGCGACCCGCCGCGAACTCTTACACGTGCTGGCCGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: ARAEDARTVRAQVSD*GDPPRTLTRAGRAR
Trigger: ACGGGCCCGGCCAGCACGTGTAAGAGTTCGCGGCGGGTCGCCGCAGTCACTCACCTGAGCGCGCACGGTCCGCGCGTCCTCCGCTCGTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS TCA 90 bp GTTGGGACGCACGAGCGGAGGACGCGCGGACCGTGCGCGCTCAGGTaGGTGACTGCGGCGACCCGCCGCGAACTCTTACACGTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VGTHERRTRGPCALR*VTAATRRELLHVLA
Trigger: GGCCAGCACGTGTAAGAGTTCGCGGCGGGTCGCCGCAGTCACTCACCTGAGCGCGCACGGTCCGCGCGTCCTCCGCTCGTGCGTCCCAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS GCA 90 bp GGGCTTTCCTGGGCTCAGGCCTCGCCGGCCGCCTCAGGGTGCTTCTaGCGCAGGTGTTTGTCCAGGGTGGCTCGCAGGCCGAAGGGCACA +
Preference number: 5 (lower is better)
Translates to: GLSWAQASPAASGCF*RRCLSRVARRPKGT
Trigger: TGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGCGGCCGGCGAGGCCTGAGCCCAGGAAAGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 90 bp CGCCGGCCGCCTCAGGGTGCTTCTGCCGCAGGTGTTTGTCCAGGGTaGCTCGCAGGCCGAAGGGCACATGGCAGTGGGGGCACTCGAAGC +
Preference number: 5 (lower is better)
Translates to: RRPPQGASAAGVCPG*LAGRRAHGSGGTRS
Trigger: GCTTCGAGTGCCCCCACTGCCATGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGCGGCCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS TCA 90 bp TGCAGCCACCTCGGCCAGGCCCAGGAGCGGGGCCTCCGGGGCCTCTaGTTCTGTCTGGTAGATGGACAGTCCGTGGTCCCACTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: CSHLGQAQERGLRGL*FCLVDGQSVVPLGV
Trigger: CACGCCCAGTGGGACCACGGACTGTCCATCTACCAGACAGAATCAGAGGCCCCGGAGGCCCCGCTCCTGGGCCTGGCCGAGGTGGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 90 bp GGGCTTGAGTTCGATGACGAGGTCCTGCATTTCCATCTCGTCGTCTaGGTTGGCGGCGGGCGCGGGCTCTACTCGGCGGGGCGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLEFDDEVLHFHLVV*VGGGRGLYSAGRAA
Trigger: GGCAGCGCGCCCCGCCGAGTAGAGCCCGCGCCCGCCGCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS CCA 90 bp TGCCGCAGGTGTTTGTCCAGGGTGGCTCGCAGGCCGAAGGGCACATaGCAGTGGGGGCACTCGAAGCGGGTGCTGCCAGGCGTCATGCCG +
Preference number: 5 (lower is better)
Translates to: CRRCLSRVARRPKGT*QWGHSKRVLPGVMP
Trigger: CGGCATGACGCCTGGCAGCACCCGCTTCGAGTGCCCCCACTGCCATGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 90 bp GGCCCAGGAGCGGGGCCTCCGGGGCCTCTGATTCTGTCTGGTAGATaGACAGTCCGTGGTCCCACTGGGCGTGACGCAGCAGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GPGAGPPGPLILSGR*TVRGPTGRDAAASR
Trigger: CCTGGAAGCTGCTGCGTCACGCCCAGTGGGACCACGGACTGTCCATCTACCAGACAGAATCAGAGGCCCCGGAGGCCCCGCTCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 90 bp TGGGGCTGCGCGTCTGGCTCGGGCTTGAGTTCGATGACGAGGTCCTaGATTTCCATCTCGTCGTCTGGGTTGGCGGCGGGCGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: WGCASGSGLSSMTRS*ISISSSGLAAGAGS
Trigger: AGAGCCCGCGCCCGCCGCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGCGCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS CCA 90 bp GGGCTTGAGTTCGATGACGAGGTCCTGCATTTCCATCTCGTCGTCTaGGTTGGGACGCACGAGCGGAGGACGCGCGGACCGTGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: GLEFDDEVLHFHLVV*VGTHERRTRGPCAL
Trigger: GAGCGCGCACGGTCCGCGCGTCCTCCGCTCGTGCGTCCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS CCA 90 bp CTCCAACGGGAAGGTCTGCAGGCAGCGGCCGCAGGTCAACAGATCTaGGTGTTTGTCGGTCCAGGGCTGGCGGTCGGGATAGTTCGGGGT +
Preference number: 5 (lower is better)
Translates to: LQREGLQAAAAGQQI*VFVGPGLAVGIVRG
Trigger: ACCCCGAACTATCCCGACCGCCAGCCCTGGACCGACAAACACCCAGATCTGTTGACCTGCGGCCGCTGCCTGCAGACCTTCCCGTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGCAGCCTTGGGGCCTGTaGGGGCTGCGCGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KAGKNEEVNGCWQRYQGQQPWGL*GLRVWL
Trigger: GAGCCAGACGCGCAGCCCCAACAGGCCCCAAGGCTG...CTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp TTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGCCGGGCCCGCGGCTCTaGCCCCCTGACTTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LEKAGKNEEVNGCWQRYQPGPRL*PPDLGI
Trigger: GATGCCCAAGTCAGGGGGCAAGAGCCGCGGGCCCGG...CTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCACCGGGCCCGCGGCTCTaGCCCCCTGACTTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPPGPRL*PPDLGI
Trigger: GATGCCCAAGTCAGGGGGCAAGAGCCGCGGGCCCGG...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS TCA 90 bp TCCTCTCGTTCTGAGCCCTGGCCGCGGCTGGGGCCTCTGAAGAGCTaGCAGCCCAGCTTCTTGTGGTCCATGAAGGCAGTGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSRSEPWPRLGPLKS*QPSFLWSMKAVMAS
Trigger: GGAGGCCATCACTGCCTTCATGGACCACAAGAAGCTGGGCTGTCAGCTCTTCAGAGGCCCCAGCCGCGGCCAGGGCTCAGAACGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS TCA 90 bp GTCCGTGGTCCCACTGGGCGTGACGCAGCAGCTTCCAGGCCACTGTaGACTGTTTGCCACAGCGCAGGCAGCTCAAGGCCTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: VRGPTGRDAAASRPL*TVCHSAGSSRPSAP
Trigger: AGGAGCTGAAGGCCTTGAGCTGCCTGCGCTGTGGCAAACAGTTCACAGTGGCCTGGAAGCTGCTGCGTCACGCCCAGTGGGACCACGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 90 bp TGGGGCTGCGCGTCTGGCTCGGGCTTGAGTTCGATGACGAGGTCCTaGATTTCCATCTCGTCGTCTGGGTTGGGACGCACGAGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: WGCASGSGLSSMTRS*ISISSSGLGRTSGG
Trigger: TCCTCCGCTCGTGCGTCCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGCGCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS-3UTR CAA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCACTTGCACGGGGGCTCTaGGCCTCAGCTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPLARGL*ASAAGP
Trigger: GGGGCCAGCAGCTGAGGCCAAGAGCCCCCGTGCAAG...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp TACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACATCTCGTCGTCTGGGTaGGCGGCGGGCGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: YLEKAGKNEEVNGCWQRYISSSG*AAGAGS
Trigger: AGAGCCCGCGCCCGCCGCCAACCCAGACGACGAGAT...GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS TCA 90 bp GTGATGCCTTCTGGCTGTTTGCAGGGTCAGTTCTTTGTTCCGTGGTaGTGGCTCCCCAAGTGTCTCCACCAGGGCCGGCTTGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: VMPSGCLQGQFFVPW*WLPKCLHQGRLEPH
Trigger: GTGGGGCTCAAGCCGGCCCTGGTGGAGACACTTGGGGAGCCATCACCACGGAACAAAGAACTGACCCTGCAAACAGCCAGAAGGCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGGCCACTGTGAACTGTTaGCCACAGCGCAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KAGKNEEVNGCWQRYQGQATVNC*PQRRQL
Trigger: GAGCTGCCTGCGCTGTGGCAAACAGTTCACAGTGGC...CTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGCTTGCACGGGGGCTCTaGGCCTCAGCTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: NLLGEGGQKRGGQWVLAALARGL*ASAAGP
Trigger: GGGGCCAGCAGCTGAGGCCAAGAGCCCCCGTGCAAG...CGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGAGCTGAGGGTCTTCTaGCACACAGGACAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EGGQKRGGQWVLAAVPGTELRVF*HTGQVG
Trigger: CCCCACCTGTCCTGTGTGCAAGAAGACCCTCAGCTC...TGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp TGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGGAGGTCAATGGGTGTaGGCAGCGGTACCAGGGACA +
Preference number: 5 (lower is better)
Translates to: WRRRAKTRRSMGVGSGTRGGQWV*AAVPGT
Trigger: TGTCCCTGGTACCGCTGCCAACACCCATTGACCTCC...CCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 90 bp TTCTTGTGGTCCATGAAGGCAGTGATGGCCTCCAACGGGAAGGTCTaGAGGCAGCGGCCGCAGGTCAACAGATCTGGGTGTTTGTCGGTC +
Preference number: 5 (lower is better)
Translates to: FLWSMKAVMASNGKV*RQRPQVNRSGCLSV
Trigger: GACCGACAAACACCCAGATCTGTTGACCTGCGGCCGCTGCCTGCAGACCTTCCCGTTGGAGGCCATCACTGCCTTCATGGACCACAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGCCACTGTGAACTGTTaGCCACAGCGCAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPATVNC*PQRRQL
Trigger: GAGCTGCCTGCGCTGTGGCAAACAGTTCACAGTGGC...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGGGAGCGCATGTGCACTTaGAGGTTGCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GQKRGGQWVLAAVPGTVRERMCT*RLLKEL
Trigger: CAGCTCCTTCAGCAACCTCAAAGTGCACATGCGCTC...CCTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGGACTTGGGCATCTTTTaGGGTGATGCCTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GEGGQKRGGQWVLAAVPGDLGIF*GDAFWL
Trigger: CAGCCAGAAGGCATCACCCAAAAAGATGCCCAAGTC...CCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGCTCTTGCCCCCTGACTaGGGCATCTTTTTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: GEGGQKRGGQWVLAAVPGLLPPD*GIFLGD
Trigger: ATCACCCAAAAAGATGCCCAAGTCAGGGGGCAAGAG...CCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGCTCTTGCCCCCTGACTaGGGCATCTTTTTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: GGQKRGGQWVLAAVPGTVLLPPD*GIFLGD
Trigger: ATCACCCAAAAAGATGCCCAAGTCAGGGGGCAAGAG...CACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACGGTGCACCGTCAGGTaGCTGCTGTTGGTAAAATGC +
Preference number: 5 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGRCTVR*LLLVKC
Trigger: GCATTTTACCAACAGCAGCAACCTGACGGTGCACCG...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AAAGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTCAGCCTTGGGGCCTGTaGGGGCTGCGCGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KGKIYLEKAGKNEEVNGCQPWGL*GLRVWL
Trigger: GAGCCAGACGCGCAGCCCCAACAGGCCCCAAGGCTG...ACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp CGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTGAGATGTGCACTTTGAGGTaGCTGAAGGAGCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: RAKTRRSMGVGSGTRDSEMCTLR*LKELRV
Trigger: GACCCTCAGCTCCTTCAGCAACCTCAAAGTGCACAT...CTCACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp CTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGAGCGCATGTGCACTTaGAGGTTGCTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LGEGGQKRGGQWVLAAVPERMCT*RLLKEL
Trigger: CAGCTCCTTCAGCAACCTCAAAGTGCACATGCGCTC...TGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGAGACTTGGGCATCTTTTaGGGTGATGCCTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EKAGKNEEVNGCWQRYQGDLGIF*GDAFWL
Trigger: CAGCCAGAAGGCATCACCCAAAAAGATGCCCAAGTC...TCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp TTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTAGGAGGTCAATGGGTGTaGGCAGCGGTACCAGGGACA +
Preference number: 5 (lower is better)
Translates to: LLGEGGQKRGGQWVLAAVGGQWV*AAVPGT
Trigger: TGTCCCTGGTACCGCTGCCAACACCCATTGACCTCC...TACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGCGTCTGGCTCGGGCTaGAGTTCGATGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSASGSG*SSMTRS
Trigger: GGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGC...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp TTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGATGTGCACTTTGAGGTaGCTGAAGGAGCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LEKAGKNEEVNGCWQRYQMCTLR*LKELRV
Trigger: GACCCTCAGCTCCTTCAGCAACCTCAAAGTGCACAT...CTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGTCTGGCTCGGGCTaGAGTTCGATGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAASGSG*SSMTRS
Trigger: GGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGC...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGAGCTGAGGGTCTTCTaGCACACAGGACAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KFTWRRRAKTRRSMGVGSELRVF*HTGQVG
Trigger: CCCCACCTGTCCTGTGTGCAAGAAGACCCTCAGCTC...GCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGGTACCAGGGACAGTATGCCTTCTGGCTGTTaGCAGGGTCAGTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: RRAKTRRSMGVGSGTRDSMPSGC*QGQFFV
Trigger: AACAAAGAACTGACCCTGCAAACAGCCAGAAGGCAT...ACTGTCCCTGGTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AGGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGAACAGATCTGGGTGTTaGTCGGTCCAGGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RENLLGEGGQKRGGQWVLNRSGC*SVQGWR
Trigger: CCGCCAGCCCTGGACCGACAAACACCCAGATCTGTT...CAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAAACAGATCTGGGTGTTaGTCGGTCCAGGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLANRSGC*SVQGWR
Trigger: CCGCCAGCCCTGGACCGACAAACACCCAGATCTGTT...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGCGTGCAGGGTCAGTTCTTaGTTCCGTGGTGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: NLLGEGGQKRGGQWVLAACRVSS*FRGDGS
Trigger: GGAGCCATCACCACGGAACAAAGAACTGACCCTGCA...CGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GGGAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCGGTGCACCGTCAGGTaGCTGCTGTTGGTAAAATGC +
Preference number: 5 (lower is better)
Translates to: GKIYLEKAGKNEEVNGCWRCTVR*LLLVKC
Trigger: GCATTTTACCAACAGCAGCAACCTGACGGTGCACCG...CCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp AAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAGTGCAGGGTCAGTTCTTaGTTCCGTGGTGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: KIYLEKAGKNEEVNGCWQCRVSS*FRGDGS
Trigger: GGAGCCATCACCACGGAACAAAGAACTGACCCTGCA...CTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS-3UTR CAA 90 bp GAAAATTTACTTGGAGAAGGCGGGCAAAAACGAGGAGGTCAATGGGTGTTGGCAATGCCTTCTGGCTGTTaGCAGGGTCAGTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: ENLLGEGGQKRGGQWVLAMPSGC*QGQFFV
Trigger: AACAAAGAACTGACCCTGCAAACAGCCAGAAGGCAT...TGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCAAGTAAATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 72 bp GCCGCTGCCACTTGCACGGGGGCTCTTGGCCTCAGCTaGTGGCCCCACCACTGCCGACACGGCTGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: AAATCTGALGLS*WPHHCRHGCSH
Trigger: GTGGCTGCAGCCGTGTCGGCAGTGGTGGGGCCAGCAGCTGAGGCCAAGAGCCCCCGTGCAAGTGGCAGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 72 bp TGGGCTCAGGCCTCGCCGGCCGCCTCAGGGTGCTTCTaGCGCAGGTGTTTGTCCAGGGTGGCTCGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: WAQASPAASGCF*RRCLSRVARRP
Trigger: CGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGCGGCCGGCGAGGCCTGAGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CAA 90 bp GCTCAGGCCTCGCCGGCCGCCTCAGGGTGCTTCTGCCGCAGGTGTTaGTCCAGGGTGGCTCGCAGGCCGAAGGGCACATGGCAGTGGGGG +
Preference number: 6 (lower is better)
Translates to: AQASPAASGCFCRRC*SRVARRPKGTWQWG
Trigger: CCCCCACTGCCATGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGCGGCCGGCGAGGCCTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS TCA 72 bp AGCGGAGGACGCGCGGACCGTGCGCGCTCAGGTGAGTaGCTGCGGCGACCCGCCGCGAACTCTTACACGTGC +
Preference number: 6 (lower is better)
Translates to: SGGRADRARSGE*LRRPAANSYTC
Trigger: GCACGTGTAAGAGTTCGCGGCGGGTCGCCGCAGTCACTCACCTGAGCGCGCACGGTCCGCGCGTCCTCCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS TCA 72 bp CACGAGCGGAGGACGCGCGGACCGTGCGCGCTCAGGTaGGTGACTGCGGCGACCCGCCGCGAACTCTTACAC +
Preference number: 6 (lower is better)
Translates to: HERRTRGPCALR*VTAATRRELLH
Trigger: GTGTAAGAGTTCGCGGCGGGTCGCCGCAGTCACTCACCTGAGCGCGCACGGTCCGCGCGTCCTCCGCTCGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS GCA 72 bp AGGGCACATGGCAGTGGGGGCACTCGAAGCGGGTGCTaGCAGGCGTCATGCCGTGCATGCGGCGGTGGCGGT +
Preference number: 6 (lower is better)
Translates to: RAHGSGGTRSGC*QASCRACGGGG
Trigger: ACCGCCACCGCCGCATGCACGGCATGACGCCTGGCAGCACCCGCTTCGAGTGCCCCCACTGCCATGTGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 72 bp CGAAGGGCACATGGCAGTGGGGGCACTCGAAGCGGGTaGTGCCAGGCGTCATGCCGTGCATGCGGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: RRAHGSGGTRSG*CQASCRACGGG
Trigger: GCCACCGCCGCATGCACGGCATGACGCCTGGCAGCACCCGCTTCGAGTGCCCCCACTGCCATGTGCCCTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 72 bp GAGGACGCGCGGACCGTGCGCGCTCAGGTGAGTGACTaGGGCGACCCGCCGCGAACTCTTACACGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: EDARTVRAQVSD*GDPPRTLTRAG
Trigger: GCCAGCACGTGTAAGAGTTCGCGGCGGGTCGCCGCAGTCACTCACCTGAGCGCGCACGGTCCGCGCGTCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS CAA 90 bp TTGAGTTCGATGACGAGGTCCTGCATTTCCATCTCGTCGTCTGGGTaGGCGGCGGGCGCGGGCTCTACTCGGCGGGGCGCGCTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: LSSMTRSCISISSSG*AAGAGSTRRGALPA
Trigger: GGCCGGCAGCGCGCCCCGCCGAGTAGAGCCCGCGCCCGCCGCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS GCA 72 bp CTTTCCTGGGCTCAGGCCTCGCCGGCCGCCTCAGGGTaGTTCTGCCGCAGGTGTTTGTCCAGGGTGGCTCGC +
Preference number: 6 (lower is better)
Translates to: LSWAQASPAASG*FCRRCLSRVAR
Trigger: GCGAGCCACCCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGCGGCCGGCGAGGCCTGAGCCCAGGAAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CAA 72 bp TCGCCGGCCGCCTCAGGGTGCTTCTGCCGCAGGTGTTaGTCCAGGGTGGCTCGCAGGCCGAAGGGCACATGG +
Preference number: 6 (lower is better)
Translates to: SPAASGCFCRRC*SRVARRPKGTW
Trigger: CCATGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCAGAAGCACCCTGAGGCGGCCGGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS TCA 72 bp CTCGGCCAGGCCCAGGAGCGGGGCCTCCGGGGCCTCTaGTTCTGTCTGGTAGATGGACAGTCCGTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: LGQAQERGLRGL*FCLVDGQSVVP
Trigger: TGGGACCACGGACTGTCCATCTACCAGACAGAATCAGAGGCCCCGGAGGCCCCGCTCCTGGGCCTGGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 72 bp GGGCACTCGAAGCGGGTGCTGCCAGGCGTCATGCCGTaGATGCGGCGGTGGCGGTTGAGCTTACTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GHSKRVLPGVMP*MRRWRLSLLLW
Trigger: CCAGAGCAGTAAGCTCAACCGCCACCGCCGCATGCACGGCATGACGCCTGGCAGCACCCGCTTCGAGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 72 bp TGTTTGTCCAGGGTGGCTCGCAGGCCGAAGGGCACATaGCAGTGGGGGCACTCGAAGCGGGTGCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: CLSRVARRPKGT*QWGHSKRVLPG
Trigger: GCCTGGCAGCACCCGCTTCGAGTGCCCCCACTGCCATGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 72 bp TTCGATGACGAGGTCCTGCATTTCCATCTCGTCGTCTaGGTTGGCGGCGGGCGCGGGCTCTACTCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: FDDEVLHFHLVV*VGGGRGLYSAG
Trigger: CCCCGCCGAGTAGAGCCCGCGCCCGCCGCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS CCA 72 bp GCGGGGCCTCCGGGGCCTCTGATTCTGTCTGGTAGATaGACAGTCCGTGGTCCCACTGGGCGTGACGCAGCA +
Preference number: 6 (lower is better)
Translates to: AGPPGPLILSGR*TVRGPTGRDAA
Trigger: TGCTGCGTCACGCCCAGTGGGACCACGGACTGTCCATCTACCAGACAGAATCAGAGGCCCCGGAGGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CAA 72 bp ATGACGAGGTCCTGCATTTCCATCTCGTCGTCTGGGTaGGGACGCACGAGCGGAGGACGCGCGGACCGTGCG +
Preference number: 6 (lower is better)
Translates to: MTRSCISISSSG*GRTSGGRADRA
Trigger: CGCACGGTCCGCGCGTCCTCCGCTCGTGCGTCCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS GCA 72 bp GCGTCTGGCTCGGGCTTGAGTTCGATGACGAGGTCCTaGATTTCCATCTCGTCGTCTGGGTTGGCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: ASGSGLSSMTRS*ISISSSGLAAG
Trigger: GCCCGCCGCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303809.7
CDS CCA 72 bp GAAGGTCTGCAGGCAGCGGCCGCAGGTCAACAGATCTaGGTGTTTGTCGGTCCAGGGCTGGCGGTCGGGATA +
Preference number: 6 (lower is better)
Translates to: EGLQAAAAGQQI*VFVGPGLAVGI
Trigger: TATCCCGACCGCCAGCCCTGGACCGACAAACACCCAGATCTGTTGACCTGCGGCCGCTGCCTGCAGACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 72 bp TTCGATGACGAGGTCCTGCATTTCCATCTCGTCGTCTaGGTTGGGACGCACGAGCGGAGGACGCGCGGACCG +
Preference number: 6 (lower is better)
Translates to: FDDEVLHFHLVV*VGTHERRTRGP
Trigger: CGGTCCGCGCGTCCTCCGCTCGTGCGTCCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS CAA 90 bp GAGCGCATGTGCACTTTGAGGTTGCTGAAGGAGCTGAGGGTCTTCTaGCACACAGGACAGGTGGGGCTCCGCCGGGTGAGGCCGCTGCCA +
Preference number: 6 (lower is better)
Translates to: ERMCTLRLLKELRVF*HTGQVGLRRVRPLP
Trigger: TGGCAGCGGCCTCACCCGGCGGAGCCCCACCTGTCCTGTGTGCAAGAAGACCCTCAGCTCCTTCAGCAACCTCAAAGTGCACATGCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CAA 90 bp TTGAGTTCGATGACGAGGTCCTGCATTTCCATCTCGTCGTCTGGGTaGGGACGCACGAGCGGAGGACGCGCGGACCGTGCGCGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: LSSMTRSCISISSSG*GRTSGGRADRARSG
Trigger: ACCTGAGCGCGCACGGTCCGCGCGTCCTCCGCTCGTGCGTCCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS CAA 72 bp CTTGGGGCCTGTTGGGGCTGCGCGTCTGGCTCGGGCTaGAGTTCGATGACGAGGTCCTGCATTTCCATCTCG +
Preference number: 6 (lower is better)
Translates to: LGACWGCASGSG*SSMTRSCISIS
Trigger: CGAGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGCGCAGCCCCAACAGGCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 72 bp TCCATGAAGGCAGTGATGGCCTCCAACGGGAAGGTCTaGAGGCAGCGGCCGCAGGTCAACAGATCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: SMKAVMASNGKV*RQRPQVNRSGC
Trigger: ACACCCAGATCTGTTGACCTGCGGCCGCTGCCTGCAGACCTTCCCGTTGGAGGCCATCACTGCCTTCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS GCA 72 bp GCGTCTGGCTCGGGCTTGAGTTCGATGACGAGGTCCTaGATTTCCATCTCGTCGTCTGGGTTGGGACGCACG +
Preference number: 6 (lower is better)
Translates to: ASGSGLSSMTRS*ISISSSGLGRT
Trigger: CGTGCGTCCCAACCCAGACGACGAGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622376.1
CDS CCA 72 bp GCCCGCGGCTCTTGCCCCCTGACTTGGGCATCTTTTTaGGTGATGCCTTCTGGCTGTTTGCAGGGTCAGTTC +
Preference number: 6 (lower is better)
Translates to: ARGSCPLTWASF*VMPSGCLQGQF
Trigger: GAACTGACCCTGCAAACAGCCAGAAGGCATCACCCAAAAAGATGCCCAAGTCAGGGGGCAAGAGCCGCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CAA 72 bp GGCCCGCGGCTCTTGCCCCCTGACTTGGGCATCTTTTaGGGTGATGCCTTCTGGCTGTTTGCAGGGTCAGTT +
Preference number: 6 (lower is better)
Translates to: GPRLLPPDLGIF*GDAFWLFAGSV
Trigger: AACTGACCCTGCAAACAGCCAGAAGGCATCACCCAAAAAGATGCCCAAGTCAGGGGGCAAGAGCCGCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1
CDS CCA 72 bp CCCCCTGACTTGGGCATCTTTTTGGGTGATGCCTTCTaGCTGTTTGCAGGGTCAGTTCTTTGTTCCGTGGTG +
Preference number: 6 (lower is better)
Translates to: PPDLGIFLGDAF*LFAGSVLCSVV
Trigger: CACCACGGAACAAAGAACTGACCCTGCAAACAGCCAGAAGGCATCACCCAAAAAGATGCCCAAGTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303809.7
ENST00000622376.1