RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF292 (Homo sapiens)

Ensembl gene IDs: ENSG00000188994

Ensembl transcript IDs: ENST00000339907.8, ENST00000369577.8, ENST00000369578.6, ENST00000392985.3, ENST00000466062.2, ENST00000485016.2, ENST00000496806.2, ENST00000518845.1, ENST00000524067.5

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGCTTCTTCAGCTTCACCTTCTTCAACTTCCTATCTTTCCAAGTaGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGG +
Preference number: 1 (lower is better)
Translates to: SASSASPSSTSYLSK*PTGNTAITLYPQVW
Trigger: CCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGGAAAGATAGGAAGTTGAAGAAGGTGAAGCTGAAGAAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR CCA 90 bp TTCAGCTTCACCTTCTTCAACTTCCTATCTTTCCAAGTGGCCCACTaGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTCCCT +
Preference number: 1 (lower is better)
Translates to: FSFTFFNFLSFQVAH*QYRNYALPPSLEFP
Trigger: AGGGAATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGGAAAGATAGGAAGTTGAAGAAGGTGAAGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR TCA 90 bp CGTTTCAAGGTTTTCCAATCCCAGAATTCTGGATCAAAGGGCCATTaGGTTTTCAATACAAGTAACAGCTCACAGCGTAAAGAATTTGGT +
Preference number: 1 (lower is better)
Translates to: RFKVFQSQNSGSKGH*VFNTSNSSQRKEFG
Trigger: ACCAAATTCTTTACGCTGTGAGCTGTTACTTGTATTGAAAACTCAATGGCCCTTTGATCCAGAATTCTGGGATTGGAAAACCTTGAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCTCTACCCCCAAGTCTaGAATTCCCTTGTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPLYPQV*NSLVPL
Trigger: CAGGGGGACAAGGGAATTCCAGACTTGGGGGTAGAG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR GCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTCACAATTCTAGCATaGTTGATGGCTTCCTATTTA +
Preference number: 2 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIFTILA*LMASYL
Trigger: TAAATAGGAAGCCATCAAGCATGCTAGAATTGTGAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR CCA 90 bp GTCGTTTCAAGGTTTTCCAATCCCAGAATTCTGGATCAAAGGGCCATTGAGTTTCAGCCCCTTCAGTCATaGTGCATACTATCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: VVSRFSNPRILDQRAIEFQPLQS*CILSLS
Trigger: TGACAGGGATAGTATGCACCATGACTGAAGGGGCTG...AAACTCAATGGCCCTTTGATCCAGAATTCTGGGATTGGAAAACCTTGAAACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGCAAACTCTTCCCCATaGCATGTAAAACAATTAGAA +
Preference number: 2 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSANSSP*HVKQLE
Trigger: TTCTAATTGTTTTACATGTCATGGGGAAGAGTTTGC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR GCA 90 bp GTCGTTTCAAGGTTTTCCAATCCCAGAATTCTGGATCAAAGGGCCATTGAGTTTCCCCTTCAGTCATGGTaGATACTATCCCTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: VVSRFSNPRILDQRAIEFPLQSW*ILSLSR
Trigger: TCTTGACAGGGATAGTATGCACCATGACTGAAGGGG...AAACTCAATGGCCCTTTGATCCAGAATTCTGGGATTGGAAAACCTTGAAACGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACTCAAATATTTACACTaGTCCACACTACTAGTTTTC +
Preference number: 2 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSLKYLH*STLLVF
Trigger: GAAAACTAGTAGTGTGGAGCAGTGTAAATATTTGAG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR TCA 90 bp CTGGTCTGGCTGATTATACAACATTTCCACAGCATAATACGCATCTACTGTAGGAGAAATTCACTCAGTTaGCAAGCACGTTTAACTTCC +
Preference number: 2 (lower is better)
Translates to: LVWLIIQHFHSIIRIYCRRNSLS*QARLTS
Trigger: GGAAGTTAAACGTGCTTGTCAACTGAGTGAATTTCT...CCTACAGTAGATGCGTATTATGCTGTGGAAATGTTGTATAATCAGCCAGACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTATATAGGGCAGTTTTaGCAAGTGCCCACCTTTAAG +
Preference number: 2 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPYIGQF*QVPTFK
Trigger: CTTAAAGGTGGGCACTTGGCAAAACTGCCCTATATA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCTCAAGACAATAGGCTaGGGAAAAGTATACCATGAA +
Preference number: 2 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPLKTIG*GKVYHE
Trigger: TTCATGGTATACTTTTCCCCAGCCTATTGTCTTGAG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGTTATACATGAGCAGTaGCCTGGTGAAACATACCAA +
Preference number: 2 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMVIHEQ*PGETYQ
Trigger: TTGGTATGTTTCACCAGGTCACTGCTCATGTATAAC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR TCA 90 bp AGAATTCTGGATCAAAGGGCCATTGAGTTTTCAATACAAGTAACAGCTCACAGCATCAGGCAACAAACATaGAATGGTCTTGCAAATAGA +
Preference number: 2 (lower is better)
Translates to: RILDQRAIEFSIQVTAHSIRQQT*NGLANR
Trigger: TCTATTTGCAAGACCATTTCATGTTTGTTGCCTGAT...GCTGTGAGCTGTTACTTGTATTGAAAACTCAATGGCCCTTTGATCCAGAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGTAATATGCAAACTTTaGGGGTTCAGAAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPVICKL*GFRRGK
Trigger: TTTTCCTCTTCTGAACCCGCAAAGTTTGCATATTAC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCCCCAAAATCCTGGATaGCAAATTTACAAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMPQNPG*QIYKAE
Trigger: CTCTGCTTTGTAAATTTGCCATCCAGGATTTTGGGG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR CAA 90 bp GCCATTGAGTTTTCAATACAAGTAACAGCTCACAGCGTAAAGAATTaGGTATTGGAAGATTCTCTTCATCATATTTCTGGTCTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: AIEFSIQVTAHSVKN*VLEDSLHHISGLAD
Trigger: ATCAGCCAGACCAGAAATATGATGAAGAGAATCTTCCAATACCAAATTCTTTACGCTGTGAGCTGTTACTTGTATTGAAAACTCAATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTTTTCCTGCAAATCTaGTGTTGCACAGGGAATGTA +
Preference number: 2 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMFFLQI*CCTGNV
Trigger: TACATTCCCTGTGCAACATCAGATTTGCAGGAAAAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAGCAGAGCAAAGTGTTaGTATAATGTGCCTATTTTG +
Preference number: 2 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLSRAKC*YNVPIL
Trigger: CAAAATAGGCACATTATATCAACACTTTGCTCTGCT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR CAA 90 bp CAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATaGTACTTTCATATTATCTACAGCAACTGTGACTGCTCACTTGAT +
Preference number: 2 (lower is better)
Translates to: QKNRAFFLMSLGIVL*YFHIIYSNCDCSLD
Trigger: ATCAAGTGAGCAGTCACAGTTGCTGTAGATAATATGAAAGTACAATAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR CAA 90 bp GAGTTTTCAATACAAGTAACAGCTCACAGCGTAAAGAATTTGGTATaGGAAGATTCTCTTCATCATATTTCTGGTCTGGCTGATTATACA +
Preference number: 2 (lower is better)
Translates to: EFSIQVTAHSVKNLV*EDSLHHISGLADYT
Trigger: TGTATAATCAGCCAGACCAGAAATATGATGAAGAGAATCTTCCAATACCAAATTCTTTACGCTGTGAGCTGTTACTTGTATTGAAAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR GCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGACGTGTCAGGTTTTATaGTTATTGGTAGTAAGTCTT +
Preference number: 2 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMTCQVL*LLVVSL
Trigger: AAGACTTACTACCAATAAGCATAAAACCTGACACGT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAATTTCATTAAATGTTaGCAAACTCTTCCCCATGAC +
Preference number: 2 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLNFIKC*QTLPHD
Trigger: GTCATGGGGAAGAGTTTGCCAACATTTAATGAAATT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR CCA 72 bp ACCTTCTTCAACTTCCTATCTTTCCAAGTGGCCCACTaGCAATACCGCAATTACGCTCTACCCCCAAGTCTG +
Preference number: 3 (lower is better)
Translates to: TFFNFLSFQVAH*QYRNYALPPSL
Trigger: CAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGGAAAGATAGGAAGTTGAAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCCTGCAAATCTGATGTaGCACAGGGAATGTACACAT +
Preference number: 3 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMPANLM*HRECTH
Trigger: ATGTGTACATTCCCTGTGCAACATCAGATTTGCAGG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR TCA 72 bp GTTTTCCAATCCCAGAATTCTGGATCAAAGGGCCATTaGGTTTTCAATACAAGTAACAGCTCACAGCGTAAA +
Preference number: 3 (lower is better)
Translates to: VFQSQNSGSKGH*VFNTSNSSQRK
Trigger: TTTACGCTGTGAGCTGTTACTTGTATTGAAAACTCAATGGCCCTTTGATCCAGAATTCTGGGATTGGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATGTAATATGCAAACTTaGCGGGTTCAGAAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLCNMQT*RVQKRK
Trigger: TTTCCTCTTCTGAACCCGCAAAGTTTGCATATTACA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCTGGGTGATAGAAATTaGAGGTTTAGCTCACTATTT +
Preference number: 3 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLGDRN*RFSSLF
Trigger: AAATAGTGAGCTAAACCTCAAATTTCTATCACCCAG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR-3UTR CAA 90 bp TTAGTTCATCTATTGAAGACACAATGGATGCTTCTTCTCCCATTAATGCAAGACAAGAAATTCACTCAGTaGACAAGCACGTTTAACTTC +
Preference number: 3 (lower is better)
Translates to: LVHLLKTQWMLLLPLMQDKKFTQ*TSTFNF
Trigger: GAAGTTAAACGTGCTTGTCAACTGAGTGAATTTCTT...GTCTTGCATTAATGGGAGAAGAAGCATCCATTGTGTCTTCAATAGATGAACTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466062.2
3UTR TCA 72 bp AGCACGTTTAACTTCCAGATCATCAGGCAACAAACATaGAATGGTCTTGCAAATAGATATTTTCACTTCAGT +
Preference number: 3 (lower is better)
Translates to: STFNFQIIRQQT*NGLANRYFHFS
Trigger: ACTGAAGTGAAAATATCTATTTGCAAGACCATTTCATGTTTGTTGCCTGATGATCTGGAAGTTAAACGTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR GCA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACGGGCTGGTGAAGGCCTaGTCTCGGTCACGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDGLVKA*SRSRGR
Trigger: GCGCCCACGTGACCGAGAGCAGGCCTTCACCAGCCC...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CCA 90 bp ATCCCAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAACCCCGAGCGGGAAGTaGGCAGCAGCGGCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: IPALWESEMGKLLEPRRSTPSGK*AAAAER
Trigger: CCTTTCGGCCGCTGCTGCCCACTTCCCGCTCGGGGT...TGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CCA 90 bp ATCCCAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAGCTGACAGTAGTCGGTaGCCGCTTCCACGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: IPALWESEMGKLLEPRRSADSSR*PLPRPV
Trigger: TACCGGCCGTGGAAGCGGCCACCGACTACTGTCAGC...TGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CCA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACGTCCCGATCCCGGCGTaGCTTTCCCCAGTCCACGAA +
Preference number: 4 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDVPIPA*LSPVHE
Trigger: TTCGTGGACTGGGGAAAGCCACGCCGGGATCGGGAC...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CCA 90 bp ATCCCAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCACTGCTCTCGGTCACGTaGGCGCCGCGACGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: IPALWESEMGKLLEPRRSLLSVT*APRREK
Trigger: TTTTTCCCGTCGCGGCGCCCACGTGACCGAGAGCAG...TGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR GCA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACCAACTCAACCTCTCCTaGTCGGCCTCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDQLNLS*SASSSA
Trigger: GGCGGACGAAGAGGCCGAGCAGGAGAGGTTGAGTTG...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR GCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGGTGGCGAGACATGCTaGAACTGGGCCGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIGGETC*NWAEQA
Trigger: TGCTTGTTCGGCCCAGTTGCAGCATGTCTCGCCACC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGAGACATGCTGCAACTaGGCCGAACAAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIETCCN*AEQAGF
Trigger: GAATCCTGCTTGTTCGGCCCAGTTGCAGCATGTCTC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTGGTGTGCACCTACTTaGGTGGCTGAGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIWCAPT*VAEVGE
Trigger: TTCTCCTACCTCAGCCACCCAAGTAGGTGCACACCA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATGGGTGGCGAGACATaGTGCAACTGGGCCGAACAA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSMGGET*CNWAEQ
Trigger: TTGTTCGGCCCAGTTGCAGCATGTCTCGCCACCCAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATCAGCCAGGTGTGGTaGTGTGCACCTACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSISQVW*CAPTWV
Trigger: CACCCAAGTAGGTGCACACCACCACACCTGGCTGAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGTAATACCTGCACTTTaGGAGGTGGAGGTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIVIPAL*EVEVGD
Trigger: ATCACCCACCTCCACCTCCCAAAGTGCAGGTATTAC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACCCTCTGAGATGTTCCTaGGGAGATTCGAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDPLRCS*GDSKTC
Trigger: ACAGGTCTTCGAATCTCCCCAGGAACATCTCAGAGG...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CCA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACTCTGGGAGTCTGAGATaGGCAAATTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDSGSLR*ANCLSP
Trigger: TGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGA...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CCA 90 bp ATCCCAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAGTAATCCCAGCACTCTaGGAGTCTGAGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: IPALWESEMGKLLEPRRSVIPAL*ESEMGK
Trigger: TTTGCCCATCTCAGACTCCCAGAGTGCTGGGATTAC...TGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTCTCCTTGTTGGAGCTaGCGTGACAAAAACGCAGTA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGISPCWS*RDKNAV
Trigger: TACTGCGTTTTTGTCACGTCAGCTCCAACAAGGAGA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp ATCCCAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCATACGGACATATCCTCTaGGATGTTCCTGGGGAGATT +
Preference number: 4 (lower is better)
Translates to: IPALWESEMGKLLEPRRSYGHIL*DVPGEI
Trigger: AATCTCCCCAGGAACATCTCAGAGGATATGTCCGTA...TGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR GCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTTCCACATCTGCTGTaGTTGGTCCCCCGATGTTTA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIFPHLL*LVPRCL
Trigger: TAAACATCGGGGGACCAAGCACAGCAGATGTGGAAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACTTCCTTTCCACATCTaGTGTGCTTGGTCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSLPFHI*CAWSPD
Trigger: ATCGGGGGACCAAGCACAGCAGATGTGGAAAGGAAG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGCTCCAGTCAAAAGATaGAGGATGCTCCTCAATGGT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIAPVKR*RMLLNG
Trigger: ACCATTGAGGAGCATCCTGCATCTTTTGACTGGAGC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAAGTAAGCCGAGATCGTaGAACACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSSKPRS*NTALQP
Trigger: AGGCTGGAGTGCAGTGTTGCACGATCTCGGCTTACT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACCTGAGATGGGCAAATTaGTTGAGCCCAGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDLRWAN*LSPGDQ
Trigger: TTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAG...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR GCA 90 bp AGACTCCAAGCGAAGAGCCTTTACACACAGTTCTATACAGGTAGCAAGTCCAGCCCCTGTCAAGAAGGCTaGTGCGAAGGTCATGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLQAKSLYTQFYTGSKSSPCQEG*CEGHVW
Trigger: CCACACATGACCTTCGCAGCAGCCTTCTTGACAGGG...GCTGGACTTGCTACCTGTATAGAACTGTGTGTAAAGGCTCTTCGCTTGGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTACAGTAAGATCGCTTaGATAAGTGCCCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIYSKIA*ISAHPV
Trigger: CACTGGGTGGGCACTTATCCAAGCGATCTTACTGTA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGGTCAGCAAGGTGTTTaGATGGCATACAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIGQQGV*MAYSVQ
Trigger: TTGCACACTGTATGCCATCCAAACACCTTGCTGACC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTCAGGATGCTCCTCAATaGTTTGAATGGCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIQDAPQ*FEWQQQ
Trigger: CTGCTGTTGCCATTCAAACCATTGAGGAGCATCCTG...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACAGATCAAGACCAGTCTaGGCAACATGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDRSRPV*ATWQNP
Trigger: AGGGTTTTGCCATGTTGCCCAGACTGGTCTTGATCT...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTACCTGCACCAGTGTCTaGAATTGTTCCCACTGTTTA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGITCTSV*NCSHCL
Trigger: TAAACAGTGGGAACAATTTCAGACACTGGTGCAGGT...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTAGATGGAAGTTGCACTaGGCTGAGATTGTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIRWKLH*AEIVPK
Trigger: TTTTGGCACAATCTCAGCTCAGTGCAACTTCCATCT...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTCAAATGTACTGGGAATaGCAGCAGTTTCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIQMYWE*QQFPKP
Trigger: AGGCTTTGGAAACTGCTGGCATTCCCAGTACATTTG...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAAGCTGGAAAAATGGGTaGCGAGACATGCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSSWKNG*RDMLQL
Trigger: CAGTTGCAGCATGTCTCGCCACCCATTTTTCCAGCT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTACGTCCTATTCTGGTTaGTCAGCAAGGTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGITSYSG*SARCLD
Trigger: ATCCAAACACCTTGCTGACCAACCAGAATAGGACGT...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGGAAACTCAAGGGATTaGGAAACTGGCTTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIGNSRD*ETGFFR
Trigger: ACGAAAGAAGCCAGTTTCCCAATCCCTTGAGTTTCC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATCAGGAGGAGTACTGTaGTCATCCAGATGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSSGGVL*SSRCFS
Trigger: GGAAAAGCATCTGGATGATCACAGTACTCCTCCTGA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTCACTTCAGAAGGCTaGATGGAATCTCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIFTSEG*MESPDE
Trigger: TTCATCTGGAGATTCCATTCAGCCTTCTGAAGTGAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTATTTGAGCATTTTGTaGAGTTTCACCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIYLSIL*SFTSTL
Trigger: CAGGGTGCTGGTGAAACTTCACAAAATGCTCAAATA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATTCCCTTGTCCCCCTaGACCAATGAGCATTCATTC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSIPLSP*TNEHSF
Trigger: GAATGAATGCTCATTGGTTCAGGGGGACAAGGGAAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCAACTCAACCTCTCCTaGTCGGCCTCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPQLNLS*SASSSA
Trigger: GGCGGACGAAGAGGCCGAGCAGGAGAGGTTGAGTTG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACACCAACTGACAGTGTaGCCGGAGGTTAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSHQLTV*PEVRIS
Trigger: AGAAATTCTAACCTCCGGGCACACTGTCAGTTGGTG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACATGCTTGTAATACCTaGACTTTGGGAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSHACNT*TLGGGG
Trigger: ACCTCCACCTCCCAAAGTGCAGGTATTACAAGCATG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAACAGGTACTGGTTTCTaGACTGGAATCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSTGTGF*TGITSG
Trigger: GCCAGAAGTGATTCCAGTCCAGAAACCAGTACCTGT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAAATGAGCTGGAAAAATaGGTGGCGAGACATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSNELEK*VARHAA
Trigger: TGCAGCATGTCTCGCCACCCATTTTTCCAGCTCATT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGAAGGTAGATTGTTGTaGCTGCTGCAAATTTACTGC +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIEGRLL*LLQIYC
Trigger: GCAGTAAATTTGCAGCAGCCACAACAATCTACCTTC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp TTCTATACAGGTAGCAAGTCCAGCCCCTTCAGTCATGGTGCATACTATCCCTGTCAGCCCCTTCAGTCATaGTGCATACTATCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: FYTGSKSSPFSHGAYYPCQPLQS*CILSLS
Trigger: TGACAGGGATAGTATGCACCATGACTGAAGGGGCTG...ACAGGGATAGTATGCACCATGACTGAAGGGGCTGGACTTGCTACCTGTATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTGTTTGGTCACAGCTaGTTCTGCTTTGCTTTTATC +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGILFGHS*FCFAFI
Trigger: GATAAAAGCAAAGCAGAATCAGCTGTGACCAAACAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTCCTGGAAACCTGGATaGCACAAATCATTACAAGTA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGISWKPG*HKSLQV
Trigger: TACTTGTAATGATTTGTGTCATCCAGGTTTCCAGGA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATGTGATATCTGCAGTTaGTTTAACAGGCGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSCDICS*FNRRGS
Trigger: ACTCCCACGCCTGTTAAATCAACTGCAGATATCACA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTACAAGGACATACATaGTTTCCACTAGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGILQGHT*FPLVTA
Trigger: TGCTGTGACTAGTGGAAATCATGTATGTCCTTGTAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATATTGGTCAGGGTGTaGTGTCTTCATGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSILVRV*CLHVFP
Trigger: GGGAAACACATGAAGACAGCACACCCTGACCAATAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAACTGGGTTACAAATCTaGTTGTACACTCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSTGLQI*LYTQTG
Trigger: CCCTGTCTGAGTGTACAAGCAGATTTGTAACCCAGT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGCTGACAGTAGTCGGTaGCCGCTTCCACGGCCGGTA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLADSSR*PLPRPV
Trigger: TACCGGCCGTGGAAGCGGCCACCGACTACTGTCAGC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTTTATGCCAATCTCTaGATGGTCAGAACACAGCTT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIFYANL*MVRTQL
Trigger: AAGCTGTGTTCTGACCATCCAGAGATTGGCATAAAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGGTAGTTGTGATCTTTaGAGGCCTTCCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSGSCDL*RPSQSS
Trigger: AGAAGATTGGGAAGGCCTCCAAAGATCACAACTACC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTCTCAAGACAATAGGCTaGGGAAAAGTATACCATGAA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGILKTIG*GKVYHE
Trigger: TTCATGGTATACTTTTCCCCAGCCTATTGTCTTGAG...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTACCAGAATTAGGAAATaGACTAGAGCACAAACCATT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGITRIRK*TRAQTI
Trigger: AATGGTTTGTGCTCTAGTTCATTTCCTAATTCTGGT...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAACTGGTAAAATTTTGTaGTGGCCCACCAGAATTAGG +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSTGKIL*WPTRIR
Trigger: CCTAATTCTGGTGGGCCATCACAAAATTTTACCAGT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGGGAGTCAGTGTCACTaGTGTATTTATCAGTACACA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSGSQCH*CIYQYT
Trigger: TGTGTACTGATAAATACATCAGTGACACTGACTCCC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGTTATACATGAGCAGTaGCCTGGTGAAACATACCAA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSVIHEQ*PGETYQ
Trigger: TTGGTATGTTTCACCAGGTCACTGCTCATGTATAAC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCAGGTGGGTGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPRWVIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCACCCACCT...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGGAGGTGGAGGTGGGTaGTCACCTGAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLGGGGG*SPEVRS
Trigger: ACTCCTGACCTCAGGTGATCACCCACCTCCACCTCC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTACTTAGGTCGGACTaGGGTGGAACAAATGCAATA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSLLRSD*GGTNAI
Trigger: TATTGCATTTGTTCCACCGCAGTCCGACCTAAGTAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGTAATATGCAAACTTTaGGGGTTCAGAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIVICKL*GFRRGK
Trigger: TTTTCCTCTTCTGAACCCGCAAAGTTTGCATATTAC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTAAATGCAGCATATTaGTCAGGGTGTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSLNAAY*SGCAVF
Trigger: GAAGACAGCACACCCTGACCAATATGCTGCATTTAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTAAGGCAGAACTGTTTTaGTTAGATCTTCCATTTGTG +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIKAELF*LDLPFV
Trigger: CACAAATGGAAGATCTAACCAAAACAGTTCTGCCTT...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATGGTACAGTTGGATTTaGCATCACCGTTGCATTTAC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSWYSWI*HHRCIY
Trigger: GTAAATGCAACGGTGATGCCAAATCCAACTGTACCA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGTTTTCCAAACCATTTaGCAATGGTCCATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSVFQTI*QWSISL
Trigger: CAAGCTAATGGACCATTGTCAAATGGTTTGGAAAAC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGCGTATGTAAGTCTGTaGCCAGTGCTTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPAYVSL*PVLHHC
Trigger: GCAGTGGTGAAGCACTGGTCACAGACTTACATACGC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACAACACTCTTTGCTATaGGTCCCATTGTTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSQHSLL*VPLLLS
Trigger: ACTTAACAACAATGGGACTCATAGCAAAGAGTGTTG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTGATCCTCCTTATGTaGTACTTCAGACTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSLILLM*YFRLRN
Trigger: ATTCCTCAGTCTGAAGTATCACATAAGGAGGATCAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp TTTTCTGTAGACTCCAAGCGAAGAGCCTTTACACACAGTTCTATACAGGTAGCAGCACGGAGAATTACTTaGGCCCAGGAGTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: FSVDSKRRAFTHSSIQVAARRIT*AQELEI
Trigger: TATCTCCAACTCCTGGGCTCAAGTAATTCTCCGTGC...TGCTACCTGTATAGAACTGTGTGTAAAGGCTCTTCGCTTGGAGTCTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGATCGCTTGGATAAGTaGCCACCCAGTGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPDRLDK*PPSDLG
Trigger: TCCCAGATCACTGGGTGGGCACTTATCCAAGCGATC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTGGATCTTTAAAACATaGTTCTGGATTGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIWIFKT*FWIEGR
Trigger: TCTACCTTCAATCCAGAAGCATGTTTTAAAGATCCA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTCTTAGCACCTTCTTaGTCAGACGTTTCCTTTACT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSFLAPS*SDVSFT
Trigger: AGTAAAGGAAACGTCTGAGCAAGAAGGTGCTAAGAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTCATTAACAGGTACTaGTTTCTGGACTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSFINRY*FLDWNH
Trigger: GTGATTCCAGTCCAGAAACCAGTACCTGTTAATGAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTTCAAGAAAGCGCTTaGCGTCTTCATTATCTTTAT +
Preference number: 4 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIFQESA*RLHYLY
Trigger: ATAAAGATAATGAAGACGCCAAGCGCTTTCTTGAAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAAAATCTGGTCTTGTTTaGTCACAGCTGATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSKSGLV*SQLILL
Trigger: AAGCAGAATCAGCTGTGACCAAACAAGACCAGATTT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCAGGGGTGGTACAGTTaGATTTGGCATCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPQGWYS*IWHHRC
Trigger: GCAACGGTGATGCCAAATCCAACTGTACCACCCCTG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGATTTACACTCTAACTaGTCACATGGAAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSDLHSN*SHGNFP
Trigger: TGGGAAGTTTCCATGTGACCAGTTAGAGTGTAAATC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATACTTCAAATCCCATTaGCTTAAAAGAGCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSYFKSH*LKRAPV
Trigger: GACTGGAGCTCTTTTAAGCCAATGGGATTTGAAGTA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTCCATCAGCTTTTCATaGGCTACCTGCACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPSISFS*ATCTSV
Trigger: GACACTGGTGCAGGTAGCTCATGAAAAGCTGATGGA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAAGCCCCTTCAGTCTCTaGATTAATAACTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSSPFSL*INNFNQ
Trigger: CTGATTAAAGTTATTAATTCAGAGACTGAAGGGGCT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATCAGGCAACAAACATaGAATGGTCTTGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSIRQQT*NGLANR
Trigger: TCTATTTGCAAGACCATTTCATGTTTGTTGCCTGAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTGGCAGCTGAATTTCTaGACTGGAGCTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPWQLNF*TGAFGG
Trigger: GCCTCCAAAAGCTCCAGTTCAGAAATTCAGCTGCCA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATTTCACTACCTTCTTaGCTGACACTGGTATTAAAG +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSISLPS*LTLVLK
Trigger: CTTTAATACCAGTGTCAGTCAAGAAGGTAGTGAAAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATTTCAGAAACTGGCTaGATAACTGTGATATCTGCA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSISETG*ITVISA
Trigger: TGCAGATATCACAGTTATTCAGCCAGTTTCTGAAAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAACAGATCATTTCCAGTaGATCTTTGCAATCAACTTC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSTDHFQ*IFAINF
Trigger: GAAGTTGATTGCAAAGATGCACTGGAAATGATCTGT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGAGATTCGACCGGGTTaGATATATACGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPEIRPG*IYTVTA
Trigger: GGCTGTGACCGTATATATGCAACCCGGTCGAATCTC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGAGATCGTGCAACACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLEIVQH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGTTGCACGATCTC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAACTGAGCTGAGATTGTaGCAAAACTACAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSTELRL*QNYKIS
Trigger: GCTAATTTTGTAGTTTTGGCACAATCTCAGCTCAGT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGACTGGAATCACTTCTaGCTCATAGGATTTATCTTT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSDWNHF*LIGFIF
Trigger: AAAGATAAATCCTATGAGCCAGAAGTGATTCCAGTC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTCTTTCCTTCCCATTTaGGCCCCGCCCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMSFLPI*APPTVF
Trigger: AAAGACCGTGGGCGGGGCCCAAATGGGAAGGAAAGA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATGAAGGTTAGTAGTTaGGATTTCAACACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSMKVSS*DFNTLC
Trigger: GCAAAGAGTGTTGAAATCCCAACTACTAACCTTCAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACTTGACATATTTTCCTaGCCTGGTGTTAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSLDIFS*PGVNLL
Trigger: AAGAAGATTAACACCAGGCCAGGAAAATATGTCAAG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATCATATCCAACAAGATaGGACCCTCAAAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSSYPTR*DPQKLK
Trigger: TTTTAGCTTTTGAGGGTCCCATCTTGTTGGATATGA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCTCTACCCCCAAGTCTaGAATTCCCTTGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLYPQV*NSLVPL
Trigger: CAGGGGGACAAGGGAATTCCAGACTTGGGGGTAGAG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTTCCAAGTGGCCCACTaGCAATACCGCAATTACGCT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPFQVAH*QYRNYA
Trigger: AGCGTAATTGCGGTATTGCCAGTGGGCCACTTGGAA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AGAATTCTGGATCAAAGGGCCATTGAGTTTTCAATACAAGTAACAGCTCACAGCTCTCCTTGTTGGAGCTaGCGTGACAAAAACGCAGTA +
Preference number: 4 (lower is better)
Translates to: RILDQRAIEFSIQVTAHSSPCWS*RDKNAV
Trigger: TACTGCGTTTTTGTCACGTCAGCTCCAACAAGGAGA...GCTGTGAGCTGTTACTTGTATTGAAAACTCAATGGCCCTTTGATCCAGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACCTCGACCTGGCAGCTaGATTTCTGAACTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLPRPGS*ISELEL
Trigger: AAGCTCCAGTTCAGAAATTCAGCTGCCAGGTCGAGG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGACACACTTGCTAAATaGGCTGGAAAAATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPDTLAK*AGKMGG
Trigger: GCCACCCATTTTTCCAGCTCATTTAGCAAGTGTGTC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGGTAGGAGAATCACTTaGACCTGGGAGATGGAAGTT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPGRRIT*TWEMEV
Trigger: AACTTCCATCTCCCAGGTTCAAGTGATTCTCCTACC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTCTTGAATTATCATTaGTCTCTGATACACACGTGT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSFLNYH*SLIHTC
Trigger: ACACGTGTGTATCAGAGAGCAATGATAATTCAAGAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp TTCTATACAGGTAGCAAGTCCAGCCCCTTCAGTCATGGTGCATACTATCCCTGTCTATTGAAGACACAATaGATGCTTCTTCTCCCATTA +
Preference number: 4 (lower is better)
Translates to: FYTGSKSSPFSHGAYYPCLLKTQ*MLLLPL
Trigger: TAATGGGAGAAGAAGCATCCATTGTGTCTTCAATAG...ACAGGGATAGTATGCACCATGACTGAAGGGGCTGGACTTGCTACCTGTATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTGGAGAGAATCATGCTaGCAAGAAGAGAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPWRESC*QEEKAV
Trigger: GACAGCCTTCTCTTCTTGCCAGCATGATTCTCTCCA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGGGGCTAACACTGTATaGGACTCAAGACTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPGANTV*DSRLVL
Trigger: CAAAACCAGTCTTGAGTCCCATACAGTGTTAGCCCC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATACAAGTTGTTTTTCTaGGATCACTGCTACATTACT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSYKLFF*DHCYIT
Trigger: AGTAATGTAGCAGTGATCCCAGAAAAACAACTTGTA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATCCCTTTATCATACATaGATACTGGGTTACAAATCT +
Preference number: 4 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSSLYHT*ILGYKS
Trigger: AGATTTGTAACCCAGTATCCATGTATGATAAAGGGA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACACTTGTGTACTTCGTaGGGCCGGCACATTTTCACT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLHLCTS*GRHIFT
Trigger: AGTGAAAATGTGCCGGCCTCACGAAGTACACAAGTG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGTAACACTCACAAAATaGCGCCTACAGTACTGGCAA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPVTLTK*RLQYWQ
Trigger: TTGCCAGTACTGTAGGCGGCATTTTGTGAGTGTTAC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCATCAGTACTGACCTCTaGCTGTGGCTTTACCTATAC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPISTDL*LWLYLY
Trigger: GTATAGGTAAAGCCACAGGCAGAGGTCAGTACTGAT...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACTGGGTGTGATAGCATaGATCTGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLLGVIA*ICSPSY
Trigger: GTAGCTGGGACTACAGATGCATGCTATCACACCCAG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AGGCTCAATAAGAAATTCACTCAGTTGACAAGCACGTTTAACTTCCAGATCATCCCCCTTCAGTCATGGTaGATACTATCCCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RLNKKFTQLTSTFNFQIIPLQSW*ILSLSR
Trigger: TCTTGACAGGGATAGTATGCACCATGACTGAAGGGG...GATGATCTGGAAGTTAAACGTGCTTGTCAACTGAGTGAATTTCTTATTGAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTCAGGTGCAGACTGTTaGGCATTGGTGCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMSGADC*ALVLLK
Trigger: CTTCAGTAGCACCAATGCCCAACAGTCTGCACCTGA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTCCTATCTTTCCAAGTaGCCCACTGGCAATACCGCA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMSYLSK*PTGNTA
Trigger: TGCGGTATTGCCAGTGGGCCACTTGGAAAGATAGGA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCTCTGTAGAAGTTCTTaGGCAATTTCGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLCRSS*AISAPS
Trigger: GGATGGAGCCGAAATTGCTCAAGAACTTCTACAGAG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCAACCTGTTGAAACATaGGAAAGCATTTCGGCACCC +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMQPVET*ESISAP
Trigger: GGGTGCCGAAATGCTTTCTCATGTTTCAACAGGTTG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGTTTCACCAGCACCCTaGGATCCACTTTTTACCTCA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMVSPAP*DPLFTS
Trigger: TGAGGTAAAAAGTGGATCTCAGGGTGCTGGTGAAAC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCTTCCCAACATCCACTaGAGCAGTCATACTTTCAAT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPLPNIH*SSHTFN
Trigger: ATTGAAAGTATGACTGCTTCAGTGGATGTTGGGAAG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCGTTTCCTTTACTTGTaGGTTGCAACACCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPRFLYL*VATPFE
Trigger: TTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCAGCTGATTCTGCTTTaGTTTTATCCCAAGCATCAC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPQLILL*FYPKHH
Trigger: GTGATGCTTGGGATAAAAGCAAAGCAGAATCAGCTG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAATGGTCCATTAGCTTaGCTGAGCTCAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLNGPLA*LSSEAE
Trigger: TTCTGCCTCTGAGCTCAGGCAAGCTAATGGACCATT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACCAGTGCTTCACCACTaGCTTCCACAGTTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLPVLHH*LPQLSF
Trigger: AAAACTCAACTGTGGAAGGCAGTGGTGAAGCACTGG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp TCCAATCCCAGAATTCTGGATCAAAGGGCCATTGAGTTTTCAATACAAGTAACACCAATCCCAGAATTCTaGATCAAAGGGCCATTGAGT +
Preference number: 4 (lower is better)
Translates to: SNPRILDQRAIEFSIQVTPIPEF*IKGPLS
Trigger: ACTCAATGGCCCTTTGATCCAGAATTCTGGGATTGG...TGTTACTTGTATTGAAAACTCAATGGCCCTTTGATCCAGAATTCTGGGATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCCAGATGAATTAAGTTaGGCTTCAGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMPDELS*ASGGST
Trigger: AGTGCTGCCTCCTGAAGCCCAACTTAATTCATCTGG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACACCCTCAAATGTACTaGGAATGCCAGCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLHPQMY*ECQQFP
Trigger: TGGAAACTGCTGGCATTCCCAGTACATTTGAGGGTG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAGTGTGCAACAGGGGTaGTACAGTTGGATTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLSVQQG*YSWIWH
Trigger: ATGCCAAATCCAACTGTACCACCCCTGTTGCACACT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAGCAAGGTGTTTGGATaGCATACAGTGTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLSKVFG*HTVCNR
Trigger: CCTGTTGCACACTGTATGCCATCCAAACACCTTGCT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTTTGACGTCCTATTCTaGTTGGTCAGCAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPFDVLF*LVSKVF
Trigger: AAACACCTTGCTGACCAACCAGAATAGGACGTCAAA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCACATGCAGTGTGACATaGGGGACAAAAGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPTCSVT*GTKVSL
Trigger: TAAAGAAACTTTTGTCCCTCATGTCACACTGCATGT...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTTGCTCTAAAGACTTaGTGCTCCTTTCGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMFALKT*CSFRWV
Trigger: AACCCACCGAAAGGAGCATCAAGTCTTTAGAGCAAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACGTTGCATTTACTTGTaGTGCATCAGAGACACAACC +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLRCIYL*CIRDTT
Trigger: GGTTGTGTCTCTGATGCATCACAAGTAAATGCAACG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGGAAGTTTTGGAGTTTaGCGTCCTATTCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMGSFGV*RPILVG
Trigger: ACCAACCAGAATAGGACGTCAAACTCCAAAACTTCC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTGCTCCTCAATGGTTTaGATGGCAACAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMCSSMV*MATAVS
Trigger: AGAAACTGCTGTTGCCATTCAAACCATTGAGGAGCA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGACATTATCACTGCACTaGAGCTGTGATGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMTLSLH*SCDGLA
Trigger: TGCCAATCCATCACAGCTTCAGTGCAGTGATAATGT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGTCCCCCTGAACCAATaGGCATTCATTCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLVPLNQ*AFIHLS
Trigger: TGAAAGATGAATGAATGCTCATTGGTTCAGGGGGAC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGCGCTGCATTTTAAATaGAGCATATTGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLALHFK*SILVRV
Trigger: CACCCTGACCAATATGCTGCATTTAAAATGCAGCGC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGAAAAACAGGCAAGCTaGTACATTCCTCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLEKQAS*YIPQWR
Trigger: CCTCCATTGAGGAATGTAGCAGCTTGCCTGTTTTTC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACCAATCCCAGAATTCTaGATCAAAGGGCCATTGAGT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLPIPEF*IKGPLS
Trigger: ACTCAATGGCCCTTTGATCCAGAATTCTGGGATTGG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTCGGCTCCATCCAGTaGTTTACAGTAAGATCGCTT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFGSIQ*FTVRSL
Trigger: AAGCGATCTTACTGTAAACCACTGGATGGAGCCGAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCTTGTTACCAAGTTTTaGGAAGCGTTAGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPLVTKF*EALGAI
Trigger: AATTGCACCTAACGCTTCCCAAAACTTGGTAACAAG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGAAGAAGTATTAGCTTaGGTCTCTACACTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPEEVLA*VSTLVL
Trigger: TAGCACAAGTGTAGAGACCCAAGCTAATACTTCTTC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGTTAACAAAGAAAGTTaGCGACACCTCTCAAGGTAC +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMVNKES*RHLSRY
Trigger: GTACCTTGAGAGGTGTCGTCAACTTTCTTTGTTAAC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp ATTCTGGATCAAAGGGCCATTGAGTTTTCAATACAAGTAACAGCTCACAGCGTAATCAGGCAACAAACATaGAATGGTCTTGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: ILDQRAIEFSIQVTAHSVIRQQT*NGLANR
Trigger: TCTATTTGCAAGACCATTTCATGTTTGTTGCCTGAT...TACGCTGTGAGCTGTTACTTGTATTGAAAACTCAATGGCCCTTTGATCCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAATGGAATCTCCAGATaGATTAAGTTGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLNGISR*IKLGFR
Trigger: CCTGAAGCCCAACTTAATTCATCTGGAGATTCCATT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTATCCTCAATCCCCTaGTTGAGAGACACCTTAATG +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLSSIP*LRDTLM
Trigger: CATTAAGGTGTCTCTCAATCAGGGGATTGAGGATAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGACTGCCTTCCACAGTTaGGTTTTCTTGCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMTAFHS*VFLLSK
Trigger: TTTGGAAAGCAAGAAAACTCAACTGTGGAAGGCAGT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGGGCATTGGTGCTACTaGAGTTATTTGCAACATTCA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLGHWCY*SYLQHS
Trigger: TGAATGTTGCAAATAACTTCAGTAGCACCAATGCCC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACTGGATCTTGTGTTCTaGGGACCACTTATAACAGAA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLLDLVF*GPLITE
Trigger: TTCTGTTATAAGTGGTCCTCAGAACACAAGATCCAG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGAACAGTCACTTACCTaGCATCGAAATTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPEQSLT*HRNSFK
Trigger: TTTGAAAGAATTTCGATGTCAGGTAAGTGACTGTTC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCCGATGTTTAGACTTTaGTTTTTCTTGGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPPMFRL*FFLVCL
Trigger: AAGGCAAACCAAGAAAAATCAAAGTCTAAACATCGG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTTCAACTTCCTTTTGTaGAACTGTAGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPFNFLL*NCSCCS
Trigger: AGAACAACAGCTACAGTTTCACAAAAGGAAGTTGAA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATGCTTTTTGTCTTTCTaGCTGGCAGAGGTTATCTTC +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLCFLSF*LAEVIF
Trigger: GAAGATAACCTCTGCCAGTCAGAAAGACAAAAAGCA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGCAAACTCTTCCCCATaGCATGTAAAACAATTAGAA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPANSSP*HVKQLE
Trigger: TTCTAATTGTTTTACATGTCATGGGGAAGAGTTTGC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCCCATCTCTGATAATTaGAGGCCATTTAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMPISDN*RPFSPF
Trigger: AAAAGGGCTAAATGGCCTGCAATTATCAGAGATGGG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCTATTGAAGACACAATaGATGCTTCTTCTCCCATTA +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPLLKTQ*MLLLPL
Trigger: TAATGGGAGAAGAAGCATCCATTGTGTCTTCAATAG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTACTGGTTTCTGGACTaGAATCACTTCTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMYWFLD*NHFWLI
Trigger: TATGAGCCAGAAGTGATTCCAGTCCAGAAACCAGTA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAACTGCTACATTACTGTaGGTATTTTGGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLTATLL*VFWVSA
Trigger: AGCAGAGACCCAAAATACCCACAGTAATGTAGCAGT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACCCCAAAATCCTGGATaGCAAATTTACAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLPQNPG*QIYKAE
Trigger: CTCTGCTTTGTAAATTTGCCATCCAGGATTTTGGGG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGAGAAATTCACTCAGTTaGCAAGCACGTTTAACTTCC +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMRNSLS*QARLTS
Trigger: GGAAGTTAAACGTGCTTGTCAACTGAGTGAATTTCT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp TTAGTTCATCTATTGAAGACACAATGGATGCTTCTTCTCCCATTAATGCAAGACAGAAATTCACTCAGTTaGCAAGCACGTTTAACTTCC +
Preference number: 4 (lower is better)
Translates to: LVHLLKTQWMLLLPLMQDRNSLS*QARLTS
Trigger: GGAAGTTAAACGTGCTTGTCAACTGAGTGAATTTCT...GTCTTGCATTAATGGGAGAAGAAGCATCCATTGTGTCTTCAATAGATGAACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTGTCGTACTATTCTGTaGCCAAGGAATTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMCRTIL*PRNSLS
Trigger: TGACAAAGAATTCCTTGGTCACAGAATAGTACGACA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACTTTACCACAACCTGTaGACTTACAAGTGTACGTAT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLLYHNL*TYKCTY
Trigger: ATACGTACACTTGTAAGTTCACAGGTTGTGGTAAAG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAGAGACACAACCTGTTaGAACATGAGAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLRDTTC*NMRKHF
Trigger: GAAATGCTTTCTCATGTTTCAACAGGTTGTGTCTCT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTTTCCACCAAACTCTaGGGTTCACAAGTTGGAATT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMFSTKL*GSQVGI
Trigger: AATTCCAACTTGTGAACCTCAGAGTTTGGTGGAAAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAATTATCATTGCTCTCTaGTACACACGTGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLIIIAL*YTRVRI
Trigger: GATTCTGACACGTGTGTATCAGAGAGCAATGATAAT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGTAGGTTTCATTTCCTaGAGTTGCTTTAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMVGFIS*SCFKTS
Trigger: GCTTGTCTTAAAGCAACTTCAGGAAATGAAACCTAC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAATTAATTATCAGTACTaGCCTCTGCCTGTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLINYQY*PLPVAL
Trigger: TAAAGCCACAGGCAGAGGTCAGTACTGATAATTAAT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTTTTCCTGCAAATCTaGTGTTGCACAGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFFLQI*CCTGNV
Trigger: TACATTCCCTGTGCAACATCAGATTTGCAGGAAAAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTTAACTTTTTCAGGTaGAGACTGTTGGGCATTGGT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFNFFR*RLLGIG
Trigger: ACCAATGCCCAACAGTCTGCACCTGAAAAAGTTAAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTGGAGAATCAAGTTTTaGTGTATCGTAAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMWRIKF*CIVKAA
Trigger: TGCTGCCTTTACGATACAGCAAAACTTGATTCTCCA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTTCTTGGTTTGCCTTaGTTGACATATTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFLGLP*LTYFPG
Trigger: GCCAGGAAAATATGTCAAGCAAGGCAAACCAAGAAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCTCAAATATTTACACTaGTCCACACTACTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPLKYLH*STLLVF
Trigger: GAAAACTAGTAGTGTGGAGCAGTGTAAATATTTGAG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTCCTGGTTGAATAAATaGCATTTGAGATCAGCATTT +
Preference number: 4 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPSWLNK*HLRSAF
Trigger: AAATGCTGATCTCAAATGGCATTTATTCAACCAGGA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTATCCAATGGTTCCTaGGAAAGAATAGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLSNGS*ERIVHS
Trigger: ACTGTGCACTATTCTTTCCCAGGAACCATTGGATAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACAATGGAGGAAGTTTTaGAGTTTGACGTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLQWRKF*SLTSYS
Trigger: AGAATAGGACGTCAAACTCCAAAACTTCCTCCATTG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATGCTACATTCCTCAATaGAGGAAGTTTTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLCYIPQ*RKFWSL
Trigger: CAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGAAGCTGTGATGGATTaGCAAACTGTACAAACGTTT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLEAVMD*QTVQTF
Trigger: AAACGTTTGTACAGTTTGCCAATCCATCACAGCTTC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
3UTR CAA 72 bp AGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATaGTACTTTCATATTATCTACAGCAACTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: RAFFLMSLGIVL*YFHIIYSNCDC
Trigger: GCAGTCACAGTTGCTGTAGATAATATGAAAGTACAATAATACTATACCTAGGGACATCAGAAAGAATGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTTCCCAATACTCTGTaGAGAATTATAGGTTCGAGT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMFPNTL*RIIGSS
Trigger: ACTCGAACCTATAATTCTTCACAGAGTATTGGGAAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTACAGCCTTGGTTTTaGCACACAAAGGGTTTATTA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLQPWF*HTKGLL
Trigger: TAATAAACCCTTTGTGTGTCAAAACCAAGGCTGTAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACTTGGACGAATCAAATaGGCCTTATGTTTGTCATTA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLLGRIK*ALCLSL
Trigger: TAATGACAAACATAAGGCTCATTTGATTCGTCCAAG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACTGCTGCAAATTTACTaGATTTGTGGAGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLLLQIY*ICGENH
Trigger: ATGATTCTCTCCACAAATGCAGTAAATTTGCAGCAG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAGATTTCAACACTCTTTaGTATGAGTCCCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLDFNTL*YESHCC
Trigger: ACAACAATGGGACTCATAGCAAAGAGTGTTGAAATC...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTTTTCTGGGATCACTaGTACATTACTGTGGGTATT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMFFWDH*YITVGI
Trigger: AATACCCACAGTAATGTAGCAGTGATCCCAGAAAAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCTGTATACAGATATATaGTTTACTGCCACAGTGCAT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLYTDI*FTATVH
Trigger: ATGCACTGTGGCAGTAAACCATATATCTGTATACAG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGATTGGGATGCTGGAGTaGATAGGTCATTTTCTAATT +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMIGMLE*IGHFLI
Trigger: AATTAGAAAATGACCTATCCACTCCAGCATCCCAAT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR TCA 90 bp TCAATACAAGTAACAGCTCACAGCGTAAAGAATTTGGTATTGGAAGATTCTCTTGAGACCCCATCTCTCTaGATTAATAACTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: SIQVTAHSVKNLVLEDSLETPSL*INNFNQ
Trigger: CTGATTAAAGTTATTAATTCAGAGAGATGGGGTCTC...AAGAGAATCTTCCAATACCAAATTCTTTACGCTGTGAGCTGTTACTTGTATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTTCCAGTGCATCTTTaGAATCAACTTCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFPVHL*NQLLKS
Trigger: AGATTTCAGAAGTTGATTGCAAAGATGCACTGGAAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp TTAGTTCATCTATTGAAGACACAATGGATGCTTCTTCTCCCATTAATGCAAGACTTTCCAGTGCATCTTTaGAATCAACTTCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: LVHLLKTQWMLLLPLMQDFPVHL*NQLLKS
Trigger: AGATTTCAGAAGTTGATTGCAAAGATGCACTGGAAA...GTCTTGCATTAATGGGAGAAGAAGCATCCATTGTGTCTTCAATAGATGAACTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR GCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGACAGTTGAGTTTTCTTaGTTTCCAAAGTTATCCTCA +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMTVEFS*FPKLSS
Trigger: TGAGGATAACTTTGGAAAGCAAGAAAACTCAACTGT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTTTTACATTATCACTaGACTGAAGCTGTGATGGAT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFLHYH*TEAVMD
Trigger: ATCCATCACAGCTTCAGTGCAGTGATAATGTAAAAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTCACAATTCTAGCATaGTTGATGGCTTCCTATTTA +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFTILA*LMASYL
Trigger: TAAATAGGAAGCCATCAAGCATGCTAGAATTGTGAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR GCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAACGTGTCAGGTTTTATaGTTATTGGTAGTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLTCQVL*LLVVSL
Trigger: AAGACTTACTACCAATAAGCATAAAACCTGACACGT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTTATCCTTATCCAATaGTTCCTGGGAAAGAATAGT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLFILIQ*FLGKNS
Trigger: ACTATTCTTTCCCAGGAACCATTGGATAAGGATAAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAGTTCTTTGCACATATaGGGCAACTATAAATTCCAT +
Preference number: 4 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLSSLHI*GNYKFH
Trigger: ATGGAATTTATAGTTGCCCCATATGTGCAAAGAACT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CCA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTTTCCAGTATTCGGATaGTCTTTGTCAGTATTTTTC +
Preference number: 4 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMFPVFG*SLSVFF
Trigger: GAAAAATACTGACAAAGACCATCCGAATACTGGAAA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS GCA 90 bp TCCCGCAGCTGTAGCTCCAGCTCCTGGAGCCGCTCGCCCAGGCGCTaGAGCTCCGCGACGCAGCCGCCTTCGCCGCAACTCAACCTCTCC +
Preference number: 5 (lower is better)
Translates to: SRSCSSSSWSRSPRR*SSATQPPSPQLNLS
Trigger: GGAGAGGTTGAGTTGCGGCGAAGGCGGCTGCGTCGCGGAGCTGCAGCGCCTGGGCGAGCGGCTCCAGGAGCTGGAGCTACAGCTGCGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000369578.6
ENST00000392985.3
ENST00000518845.1
CDS GCA 90 bp GGGAAGTGGGCAGCAGCGGCCGAAAGGGGCGGGCTGGTGAAGGCCTaGTCTCGGTCACGTGGGCGCCGCGACGGGAAAAAGCCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: GKWAAAAERGGLVKA*SRSRGRRDGKKPRE
Trigger: CTCCCTAGGCTTTTTCCCGTCGCGGCGCCCACGTGACCGAGAGCAGGCCTTCACCAGCCCGCCCCTTTCGGCCGCTGCTGCCCACTTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS GCA 90 bp TGCAGCTCCGCGACGCAGCCGCCTTCGCCGCAACTCAACCTCTCCTaGTCGGCCTCTTCGTCCGCCATCTTCACACCCCGCTCCGTCGCG +
Preference number: 5 (lower is better)
Translates to: CSSATQPPSPQLNLS*SASSSAIFTPRSVA
Trigger: CGCGACGGAGCGGGGTGTGAAGATGGCGGACGAAGAGGCCGAGCAGGAGAGGTTGAGTTGCGGCGAAGGCGGCTGCGTCGCGGAGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369577.8
ENST00000369578.6
ENST00000392985.3
CDS CCA 90 bp CTGCATATTCTAGGAGTGTCTGGCACAGCTGCTGACAGTAGTCGGTaGCCGCTTCCACGGCCGGTACCCGGCTCTCCCGCAGCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: LHILGVSGTAADSSR*PLPRPVPGSPAAVA
Trigger: AGCTACAGCTGCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACTACTGTCAGCAGCTGTGCCAGACACTCCTAGAATATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000369578.6
ENST00000496806.2
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTCAATGGTCCATTAGCTaGCCTGAGCTCAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIQWSIS*PELRGR
Trigger: TCTGCCTCTGAGCTCAGGCAAGCTAATGGACCATTG...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTCAGGTGCAGACTGTaGGGCATTGGTGCTACTGAA +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIFRCRL*GIGATE
Trigger: TTCAGTAGCACCAATGCCCAACAGTCTGCACCTGAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGACGTCCTATTCTGGTaGGTCAGCAAGGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIDVLFW*VSKVFG
Trigger: TCCAAACACCTTGCTGACCAACCAGAATAGGACGTC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCAAGACAGATGGGCAAATTGCTaGAGCCCAGGAGATCAAGAC +
Preference number: 5 (lower is better)
Translates to: QHSGSLRWANCLSPGDQDRWANC*SPGDQD
Trigger: GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCT...GTCTTGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CAA 90 bp ATCCCAGCACTCTGGGAGTCTGAGATGGGCAAATTGCTTGAGCCCAGGAGATCATCTGAGATGGGCAAATaGCTTGAGCCCAGGAGATCA +
Preference number: 5 (lower is better)
Translates to: IPALWESEMGKLLEPRRSSEMGK*LEPRRS
Trigger: TGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGA...TGATCTCCTGGGCTCAAGCAATTTGCCCATCTCAGACTCCCAGAGTGCTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS-3UTR CAA 90 bp GCCTTTACACACAGTTCTATACAGGTAGCAAGTCCAGCCCCTTCAGTCATGGTGGGCACGGAGAATTACTaGAGCCCAGGAGTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: AFTHSSIQVASPAPSVMVGTENY*SPGVGD
Trigger: ATCTCCAACTCCTGGGCTCAAGTAATTCTCCGTGCC...CACCATGACTGAAGGGGCTGGACTTGCTACCTGTATAGAACTGTGTGTAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS CCA 90 bp AGGACAACAATGGAGTTGACACACTTGCTAAATGAGCTGGAAAAATaGGTGGCGAGACATGCTGCAACTGGGCCGAACAAGCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: RTTMELTHLLNELEK*VARHAATGPNKQDS
Trigger: GGAATCCTGCTTGTTCGGCCCAGTTGCAGCATGTCTCGCCACCCATTTTTCCAGCTCATTTAGCAAGTGTGTCAACTCCATTGTTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp GTAACTTCACAGTGGAGAAACCTGACACATGCTGCCACAGCTAGGTaGTCTAGGTTCACATCAACAGTGATAAGTCGGCTGGGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: VTSQWRNLTHAATAR*SRFTSTVISRLGVV
Trigger: CACTACACCCAGCCGACTTATCACTGTTGATGTGAACCTAGACCACCTAGCTGTGGCAGCATGTGTCAGGTTTCTCCACTGTGAAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369578.6
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTTTTTGCTCTAAAGACTaGATGCTCCTTTCGGTGGGT +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIFCSKD*MLLSVG
Trigger: ACCCACCGAAAGGAGCATCAAGTCTTTAGAGCAAAA...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGTGGTACAGTTGGATTaGGCATCACCGTTGCATTTA +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIVVQLD*ASPLHL
Trigger: TAAATGCAACGGTGATGCCAAATCCAACTGTACCAC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS GCA 90 bp GTCCTATTCTGGTTGGTCAGCAAGGTGTTTGGATGGCATACAGTGTaGAACAGGGGTGGTACAGTTGGATTTGGCATCACCGTTGCATTT +
Preference number: 5 (lower is better)
Translates to: VLFWLVSKVFGWHTV*NRGGTVGFGITVAF
Trigger: AAATGCAACGGTGATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp TTGGAGTTTGACGTCCTATTCTGGTTGGTCAGCAAGGTGTTTGGATaGCATACAGTGTGCAACAGGGGTGGTACAGTTGGATTTGGCATC +
Preference number: 5 (lower is better)
Translates to: LEFDVLFWLVSKVFG*HTVCNRGGTVGFGI
Trigger: GATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTCCTCTCAAGGTACACTaGTATAGATGGTTCTACTCT +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIPLKVH*YRWFYS
Trigger: AGAGTAGAACCATCTATACAAGTGTACCTTGAGAGG...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACAAGCAGGATTCCCATaGGCTTTGGTCTGTGATGTA +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSQAGFP*ALVCDV
Trigger: TACATCACAGACCAAAGCCAATGGGAATCCTGCTTG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGGCCATTTAGCCCTTTaGTTGTGCTTAGGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIGHLAL*LCLGFL
Trigger: AAGAAAACCTAAGCACAACAAAAGGGCTAAATGGCC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTGCAAATTTACTGCATTaGTGGAGAGAATCATGCTGG +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIANLLH*WRESCW
Trigger: CCAGCATGATTCTCTCCACAAATGCAGTAAATTTGC...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTATTCTTAGCACCTTCTaGCTCAGACGTTTCCTTTAC +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGIILSTF*LRRFLY
Trigger: GTAAAGGAAACGTCTGAGCAAGAAGGTGCTAAGAAT...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp ACACTTTCCATTGAGGACAACAATGGAGTTGACACACTTGCTAAATaGGCTGGAAAAATGGGTGGCGAGACATGCTGCAACTGGGCCGAA +
Preference number: 5 (lower is better)
Translates to: TLSIEDNNGVDTLAK*AGKMGGETCCNWAE
Trigger: TTCGGCCCAGTTGCAGCATGTCTCGCCACCCATTTTTCCAGCTCATTTAGCAAGTGTGTCAACTCCATTGTTGTCCTCAATGGAAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp ATTCCTCAATGGAGGAAGTTTTGGAGTTTGACGTCCTATTCTGGTTaGTCAGCAAGGTGTTTGGATGGCATACAGTGTGCAACAGGGGTG +
Preference number: 5 (lower is better)
Translates to: IPQWRKFWSLTSYSG*SARCLDGIQCATGV
Trigger: CACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGCAGACTGTTGGGCATaGGTGCTACTGAAGTTATTT +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSADCWA*VLLKLF
Trigger: AAATAACTTCAGTAGCACCAATGCCCAACAGTCTGC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTTCTTTCCTTCCCATTaGGGCCCCGCCCACGGTCTT +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPFFPSH*GPAHGL
Trigger: AAGACCGTGGGCGGGGCCCAAATGGGAAGGAAAGAA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAAGGAAGTTTTGGAGTTaGACGTCCTATTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSRKFWS*TSYSGW
Trigger: CCAACCAGAATAGGACGTCAAACTCCAAAACTTCCT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAAAGGACTGTATCTTGTaGGAAACTCAAGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSKDCIL*ETQGIG
Trigger: CCCAATCCCTTGAGTTTCCAACAAGATACAGTCCTT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATGCTCCTCAATGGTTaGAATGGCAACAGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSMLLNG*NGNSSF
Trigger: GAAACTGCTGTTGCCATTCAAACCATTGAGGAGCAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCACCTGCAAATCTGATGTaGCACAGGGAATGTACACAT +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSPANLM*HRECTH
Trigger: ATGTGTACATTCCCTGTGCAACATCAGATTTGCAGG...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp TCTGTGAAGAATTATAGGTTCGAGTACATCCCTCGACCTGGCAGCTaGATTTCTGAACTGGAGCTTTTGGAGGCACTGATGGAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: SVKNYRFEYIPRPGS*ISELELLEALMEFL
Trigger: TAGGAACTCCATCAGTGCCTCCAAAAGCTCCAGTTCAGAAATTCAGCTGCCAGGTCGAGGGATGTACTCGAACCTATAATTCTTCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 90 bp AACAGGCAAGCTGCTACATTCCTCAATGGAGGAAGTTTTGGAGTTTaGCGTCCTATTCTGGTTGGTCAGCAAGGTGTTTGGATGGCATAC +
Preference number: 5 (lower is better)
Translates to: NRQAATFLNGGSFGV*RPILVGQQGVWMAY
Trigger: GTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 90 bp GTAGTAGCAGGGTTTTCCAAACCATTTGACAATGGTCCATTAGCTTaGCTGAGCTCAGAGGCAGAAATCTGGTCTTGTTTGGTCACAGCT +
Preference number: 5 (lower is better)
Translates to: VVAGFSKPFDNGPLA*LSSEAEIWSCLVTA
Trigger: AGCTGTGACCAAACAAGACCAGATTTCTGCCTCTGAGCTCAGGCAAGCTAATGGACCATTGTCAAATGGTTTGGAAAACCCTGCTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp CTACATTCCTCAATGGAGGAAGTTTTGGAGTTTGACGTCCTATTCTaGTTGGTCAGCAAGGTGTTTGGATGGCATACAGTGTGCAACAGG +
Preference number: 5 (lower is better)
Translates to: LHSSMEEVLEFDVLF*LVSKVFGWHTVCNR
Trigger: CCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp ATGTGGTATCCTGGATGGAATCCTTTATCCTTATCCAATGGTTCCTaGGAAAGAATAGTGCACAGTACCGGGTTTTTCCACACCCCAGTC +
Preference number: 5 (lower is better)
Translates to: MWYPGWNPLSLSNGS*ERIVHSTGFFHTPV
Trigger: GACTGGGGTGTGGAAAAACCCGGTACTGTGCACTATTCTTTCCCAGGAACCATTGGATAAGGATAAAGGATTCCATCCAGGATACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369578.6
ENST00000485016.2
ENST00000524067.5
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGCTTTGCTAGAGCAGTaGCTTGACTTAACTGATTTG +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSALLEQ*LDLTDL
Trigger: CAAATCAGTTAAGTCAAGCAACTGCTCTAGCAAAGC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTTAAATGCAGCATATaGGTCAGGGTGTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSFKCSI*VRVCCL
Trigger: AAGACAGCACACCCTGACCAATATGCTGCATTTAAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATCGAGGAAATGTATTaGGTAAAAATGCTGGCGAGC +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSIEEMY*VKMLAS
Trigger: GCTCGCCAGCATTTTTACCAAATACATTTCCTCGAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAACTTGTTACCAAGTTTaGGGAAGCGTTAGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSTCYQV*GSVRCN
Trigger: ATTGCACCTAACGCTTCCCAAAACTTGGTAACAAGT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAATGGAGAATCAAGTTTaGCTGTATCGTAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSMENQV*LYRKGS
Trigger: GCTGCCTTTACGATACAGCAAAACTTGATTCTCCAT...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CCAAGTGGCCCACTGGCAATACCGCAATTACGCTCTACCCCCAAGTCTGGAATTCTTGGGTCTCTACACTaGTGCTATCTTCATTTATTA +
Preference number: 5 (lower is better)
Translates to: PSGPLAIPQLRSTPKSGILGSLH*CYLHLL
Trigger: TAATAAATGAAGATAGCACAAGTGTAGAGACCCAAG...AATTCCAGACTTGGGGGTAGAGCGTAATTGCGGTATTGCCAGTGGGCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp TGCTGTGTTCTGATTCACTTCAGAAGGCTGAATGGAATCTCCAGATaGATTAAGTTGGGCTTCAGGAGGCAGCACTTTTTCAGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: CCVLIHFRRLNGISR*IKLGFRRQHFFRRS
Trigger: ACTCCTCCTGAAAAAGTGCTGCCTCCTGAAGCCCAACTTAATTCATCTGGAGATTCCATTCAGCCTTCTGAAGTGAATCAGAACACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 90 bp ATATTGGTCAGGGTGTGCTGTCTTCATGTGTTTCCCAATACTCTGTaGAGAATTATAGGTTCGAGTACATCCCTCGACCTGGCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: ILVRVCCLHVFPNTL*RIIGSSTSLDLAAE
Trigger: TTCAGCTGCCAGGTCGAGGGATGTACTCGAACCTATAATTCTTCACAGAGTATTGGGAAACACATGAAGACAGCACACCCTGACCAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 90 bp TGCTTCTGGATTGAAGGTAGATTGTTGTGGCTGCTGCAAATTTACTaGATTTGTGGAGAGAATCATGCTGGCAAGAAGAGAAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: CFWIEGRLLWLLQIY*ICGENHAGKKRRLS
Trigger: GGACAGCCTTCTCTTCTTGCCAGCATGATTCTCTCCACAAATGCAGTAAATTTGCAGCAGCCACAACAATCTACCTTCAATCCAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATTAAATGACTGGATCTaGTGTTCTGAGGACCACTTA +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSLNDWI*CSEDHL
Trigger: TAAGTGGTCCTCAGAACACAAGATCCAGTCATTTAA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCATGTAAGGACTGTATCTaGTTGGAAACTCAAGGGATT +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSCKDCI*LETQGI
Trigger: AATCCCTTGAGTTTCCAACAAGATACAGTCCTTACA...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGGAGATTCGACCGGGTaGCATATATACGGTCACAGC +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPGDSTG*HIYGHS
Trigger: GCTGTGACCGTATATATGCAACCCGGTCGAATCTCC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGTTCTTGAATTATCATaGCTCTCTGATACACACGTG +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSVLELS*LSDTHV
Trigger: CACGTGTGTATCAGAGAGCAATGATAATTCAAGAAC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp GTTGCATTTACTTGTGATGCATCAGAGACACAACCTGTTGAAACATaGGAAAGCATTTCGGCACCCTCAAATGTACTGGGAATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: VAFTCDASETQPVET*ESISAPSNVLGMPA
Trigger: TGCTGGCATTCCCAGTACATTTGAGGGTGCCGAAATGCTTTCTCATGTTTCAACAGGTTGTGTCTCTGATGCATCACAAGTAAATGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp TTTGACAATGGTCCATTAGCTTGCCTGAGCTCAGAGGCAGAAATCTaGTCTTGTTTGGTCACAGCTGATTCTGCTTTGCTTTTATCCCAA +
Preference number: 5 (lower is better)
Translates to: FDNGPLACLSSEAEI*SCLVTADSALLLSQ
Trigger: TTGGGATAAAAGCAAAGCAGAATCAGCTGTGACCAAACAAGACCAGATTTCTGCCTCTGAGCTCAGGCAAGCTAATGGACCATTGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp GTTGTGGCTGCTGCAAATTTACTGCATTTGTGGAGAGAATCATGCTaGCAAGAAGAGAAGGCTGTCCATTACTCTGTAGAAGTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: VVAAANLLHLWRESC*QEEKAVHYSVEVLE
Trigger: CTCAAGAACTTCTACAGAGTAATGGACAGCCTTCTCTTCTTGCCAGCATGATTCTCTCCACAAATGCAGTAAATTTGCAGCAGCCACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp TTGGAAAAACAGGCAAGCTGCTACATTCCTCAATGGAGGAAGTTTTaGAGTTTGACGTCCTATTCTGGTTGGTCAGCAAGGTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LEKQASCYIPQWRKF*SLTSYSGWSARCLD
Trigger: ATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp GTAAGTCATTCGTTGGAAAAACAGGCAAGCTGCTACATTCCTCAATaGAGGAAGTTTTGGAGTTTGACGTCCTATTCTGGTTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: VSHSLEKQASCYIPQ*RKFWSLTSYSGWSA
Trigger: TGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTTTTTCCAACGAATGACTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp CTACCCCCAAGTCTGGAATTCCCTTGTCCCCCTGAACCAATGAGCATTCATTCAGAAAAGGTCATCAAGTaGTTCACTTGTCTTTCTAAG +
Preference number: 5 (lower is better)
Translates to: LPPSLEFPCPPEPMSIHSEKVIK*FTCLSK
Trigger: CTTAGAAAGACAAGTGAACAACTTGATGACCTTTTC...TGAATGAATGCTCATTGGTTCAGGGGGACAAGGGAATTCCAGACTTGGGGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACCACATCTGCTGTGCTaGGTCCCCCGATGTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLPHLLC*VPRCLD
Trigger: GTCTAAACATCGGGGGACCAAGCACAGCAGATGTGG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCAGGCAGGAGAATCACTaGAACTTGGGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPRQENH*NLGGRS
Trigger: ACTTCTGCCTCCCAAGTTCAAGTGATTCTCCTGCCT...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp GACACAAATCATTACAAGTATCTTCAACTGGCGTATGTAAGTCTGTaGCCAGTGCTTCACCACTGCCTTCCACAGTTGAGTTTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: DTNHYKYLQLAYVSL*PVLHHCLPQLSFLA
Trigger: AGCAAGAAAACTCAACTGTGGAAGGCAGTGGTGAAGCACTGGTCACAGACTTACATACGCCAGTTGAAGATACTTGTAATGATTTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp TCTAAAGAATATAACATGGAAAGGGAGAAAAGAGTAACTTCACAGTaGAGAAACCTGACACATGCTGCCACAGCTAGGTGGTCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: SKEYNMEREKRVTSQ*RNLTHAATARWSRF
Trigger: GAACCTAGACCACCTAGCTGTGGCAGCATGTGTCAGGTTTCTCCACTGTGAAGTTACTCTTTTCTCCCTTTCCATGTTATATTCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369578.6
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAACAGGGGTGGTACAGTaGGATTTGGCATCACCGTTG +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLTGVVQ*DLASPL
Trigger: CAACGGTGATGCCAAATCCAACTGTACCACCCCTGT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGGGTTACAAATCTGCTaGTACACTCAGACAGGGCAT +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPGLQIC*YTQTGH
Trigger: ATGCCCTGTCTGAGTGTACAAGCAGATTTGTAACCC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGAGAATCACTTGAACTaGGGAGGCAGAAGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPENHLN*GGRSCS
Trigger: ACTGCAACTTCTGCCTCCCAAGTTCAAGTGATTCTC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp TTAAAAGAGCTCCAGTCAAAAGATGCAGGATGCTCCTCAATGGTTTaGATGGCAACAGCAGTTTCTTCTTCTTTACGCACGCTACTTAAC +
Preference number: 5 (lower is better)
Translates to: LKELQSKDAGCSSMV*MATAVSSSLRTLLN
Trigger: GTTAAGTAGCGTGCGTAAAGAAGAAGAAACTGCTGTTGCCATTCAAACCATTGAGGAGCATCCTGCATCTTTTGACTGGAGCTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 90 bp CAGAGGCAGAAATCTGGTCTTGTTTGGTCACAGCTGATTCTGCTTTaGTTTTATCCCAAGCATCACTTCTATCTGCTAGTAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: QRQKSGLVWSQLILL*FYPKHHFYLLVSCF
Trigger: AAAACAGCTTACTAGCAGATAGAAGTGATGCTTGGGATAAAAGCAAAGCAGAATCAGCTGTGACCAAACAAGACCAGATTTCTGCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 90 bp CAACAGTCTTCAGTAGTAAGTCATTCGTTGGAAAAACAGGCAAGCTaGTACATTCCTCAATGGAGGAAGTTTTGGAGTTTGACGTCCTAT +
Preference number: 5 (lower is better)
Translates to: QQSSVVSHSLEKQAS*YIPQWRKFWSLTSY
Trigger: ATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTTTTTCCAACGAATGACTTACTACTGAAGACTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp GTAGACTCCAAGCGAAGAGCCTTTACACACAGTTCTATACAGGTAGCAAGTCCACACAGCGTAAAGAATTaGGTATTGGAAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: VDSKRRAFTHSSIQVASPHSVKN*VLEDSL
Trigger: AAGAGAATCTTCCAATACCAAATTCTTTACGCTGTG...TGGACTTGCTACCTGTATAGAACTGTGTGTAAAGGCTCTTCGCTTGGAGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTGGTCAGCAAGGTGTTaGGATGGCATACAGTGTGCA +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMWSARC*DGIQCA
Trigger: TGCACACTGTATGCCATCCAAACACCTTGCTGACCA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS GCA 90 bp AGCCCTGTAACACCTGCTACAGATAAATTTCCCATCTCTGATAATTaGAGGCCATTTAGCCCTTTTGTTGTGCTTAGGTTTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SPVTPATDKFPISDN*RPFSPFVVLRFSFL
Trigger: AAGGAAAGAAAACCTAAGCACAACAAAAGGGCTAAATGGCCTGCAATTATCAGAGATGGGAAATTTATCTGTAGCAGGTGTTACAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 90 bp GGATCTTTAAAACATGCTTCTGGATTGAAGGTAGATTGTTGTGGCTaGTGCAAATTTACTGCATTTGTGGAGAGAATCATGCTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: GSLKHASGLKVDCCG*CKFTAFVERIMLAR
Trigger: TCTTGCCAGCATGATTCTCTCCACAAATGCAGTAAATTTGCAGCAGCCACAACAATCTACCTTCAATCCAGAAGCATGTTTTAAAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 90 bp GTCATTATGCTTATTAAAAATGTGTCGGAGGAGATTCGACCGGGTTaGATATATACGGTCACAGCCTTCACAATCACATTTGTATACACC +
Preference number: 5 (lower is better)
Translates to: VIMLIKNVSEEIRPG*IYTVTAFTITFVYT
Trigger: GGTGTATACAAATGTGATTGTGAAGGCTGTGACCGTATATATGCAACCCGGTCGAATCTCCTCCGACACATTTTTAATAAGCATAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000496806.2
CDS GCA 90 bp GATACACACGTGTCAGAATCTTTCACATCATTCTTAGCACCTTCTTaGTCAGACGTTTCCTTTACTTGTGAGTTGCAACACCGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: DTHVSESFTSFLAPS*SDVSFTCELQHRLN
Trigger: ATTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACGTCTGAGCAAGAAGGTGCTAAGAATGATGTGAAAGATTCTGACACGTGTGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp CAAGACATTGTCGTTTCAAGGTTTTCCAATCCCAGAATTCTGGATCAAAGGGCCAAGAAATTCACTCAGTaGACAAGCACGTTTAACTTC +
Preference number: 5 (lower is better)
Translates to: QDIVVSRFSNPRILDQRAKKFTQ*TSTFNF
Trigger: GAAGTTAAACGTGCTTGTCAACTGAGTGAATTTCTT...GGCCCTTTGATCCAGAATTCTGGGATTGGAAAACCTTGAAACGACAATGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGATACTGCATGTAGGCTaGCCAATTCCTAAACCGAGC +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMILHVG*PIPKPS
Trigger: GCTCGGTTTAGGAATTGGCAAGCCTACATGCAGTAT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCTAATCTTCCGTCCTTaGGTTTGTGTGTTTGTGAGT +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPLIFRP*VCVFVS
Trigger: ACTCACAAACACACAAACCAAAGGACGGAAGATTAG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTGGAAACTCAAGGGATaGGGAAACTGGCTTCTTTCG +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMWKLKG*GNWLLS
Trigger: CGAAAGAAGCCAGTTTCCCAATCCCTTGAGTTTCCA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp CACATCATTCTTAGCACCTTCTTGCTCAGACGTTTCCTTTACTTGTaGGTTGCAACACCGTTTGAATACAATAAGAAGATTTCGGTGTTG +
Preference number: 5 (lower is better)
Translates to: HIILSTFLLRRFLYL*VATPFEYNKKISVL
Trigger: CAACACCGAAATCTTCTTATTGTATTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACGTCTGAGCAAGAAGGTGCTAAGAATGATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 90 bp TTTGGAGGCACTGATGGAGTTCCTAATGAATTACTTAGGTCGGACTaGGGTGGAACAAATGCAATACTTTCTAATGTCTTAAGAGGTAAA +
Preference number: 5 (lower is better)
Translates to: FGGTDGVPNELLRSD*GGTNAILSNVLRGK
Trigger: TTTACCTCTTAAGACATTAGAAAGTATTGCATTTGTTCCACCGCAGTCCGACCTAAGTAATTCATTAGGAACTCCATCAGTGCCTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp TTTGCTATGAGTCCCATTGTTGTTAAGTCACTTGTTACCAAGTTTTaGGAAGCGTTAGGTGCAATTAGTGGAGGAGCAACTTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: FAMSPIVVKSLVTKF*EALGAISGGATFFL
Trigger: AAGAAAGAAAGTTGCTCCTCCACTAATTGCACCTAACGCTTCCCAAAACTTGGTAACAAGTGACTTAACAACAATGGGACTCATAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp ACAGGCGTGGGAGTCAGTGTCACTGATGTATTTATCAGTACACATTaGGATGCTGGAGTGGATAGGTCATTTTCTAATTTTAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: TGVGVSVTDVFISTH*DAGVDRSFSNFNFC
Trigger: ACAGAAATTAAAATTAGAAAATGACCTATCCACTCCAGCATCCCAATGTGTACTGATAAATACATCAGTGACACTGACTCCCACGCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp CCCAGAATTCTGGATCAAAGGGCCATTGAGTTTTCAATACAAGTAACAGCTCACATTTCCAGTGCATCTTaGCAATCAACTTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: PRILDQRAIEFSIQVTAHISSAS*QSTSEI
Trigger: GATTTCAGAAGTTGATTGCAAAGATGCACTGGAAAT...GTGAGCTGTTACTTGTATTGAAAACTCAATGGCCCTTTGATCCAGAATTCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466062.2
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGAAATCTGGTCTTGTTaGGTCACAGCTGATTCTGCT +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMEIWSC*VTADSA
Trigger: AGCAGAATCAGCTGTGACCAAACAAGACCAGATTTC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACACTGCCTTCCACAGTaGAGTTTTCTTGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLHCLPQ*SFLAFQ
Trigger: TTGGAAAGCAAGAAAACTCAACTGTGGAAGGCAGTG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCATTGAAGGTAGATTGTaGTGGCTGCTGCAAATTTAC +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPIEGRL*WLLQIY
Trigger: GTAAATTTGCAGCAGCCACAACAATCTACCTTCAAT...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCTTCTTCTGTTTTACTaGCCCTTAGTCCAATCCCGT +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLLLFY*PLVQSR
Trigger: ACGGGATTGGACTAAGGGCAAGTAAAACAGAAGAAG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTCCTTTACTTGTGAGTaGCAACACCGTTTGAATACA +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPSFTCE*QHRLNT
Trigger: TGTATTCAAACGGTGTTGCAACTCACAAGTAAAGGA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp GCTTTTCCAGCTCACCCTGAGAACGATAAACTTTACCACAACCTGTaGACTTACAAGTGTACGTATTATAATGTTGTGCTTCATGATCAT +
Preference number: 5 (lower is better)
Translates to: AFPAHPENDKLYHNL*TYKCTYYNVVLHDH
Trigger: ATGATCATGAAGCACAACATTATAATACGTACACTTGTAAGTTCACAGGTTGTGGTAAAGTTTATCGTTCTCAGGGTGAGCTGGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 90 bp ATGCCAGCAGTTTCCAAAGCCTGTTTAATAATTTCACTACCTTCTTaGCTGACACTGGTATTAAAGTTAGTCACACCAGATCGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: MPAVSKACLIISLPS*LTLVLKLVTPDRGN
Trigger: ATTTCCTCGATCTGGTGTGACTAACTTTAATACCAGTGTCAGTCAAGAAGGTAGTGAAATTATTAAACAGGCTTTGGAAACTGCTGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp TCACTTGTAACAACTGAAGTACATCCCTTTATCATACATGGATACTaGGTTACAAATCTGCTTGTACACTCAGACAGGGCATCATTTCTA +
Preference number: 5 (lower is better)
Translates to: SLVTTEVHPFIIHGY*VTNLLVHSDRASFL
Trigger: TAGAAATGATGCCCTGTCTGAGTGTACAAGCAGATTTGTAACCCAGTATCCATGTATGATAAAGGGATGTACTTCAGTTGTTACAAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCAAGAAATTCACTCAGTaGACAAGCACGTTTAACTTC +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPKKFTQ*TSTFNF
Trigger: GAAGTTAAACGTGCTTGTCAACTGAGTGAATTTCTT...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCCACAGCGTAAAGAATTaGGTATTGGAAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPHSVKN*VLEDSL
Trigger: AAGAGAATCTTCCAATACCAAATTCTTTACGCTGTG...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTTCTTTACTCTCTTCTaGGTAGTCTACCACTTTTTC +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPFFTLF*VVYHFF
Trigger: GAAAAAGTGGTAGACTACCAAGAAGAGAGTAAAGAA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCTCTCTCTTTACTAGATaGTTTAACATGCAGTGTGAC +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPSLFTR*FNMQCD
Trigger: GTCACACTGCATGTTAAACAATCTAGTAAAGAGAGA...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGAGGACAACAATGGAGTaGACACACTTGCTAAATGAG +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMRTTME*THLLNE
Trigger: CTCATTTAGCAAGTGTGTCAACTCCATTGTTGTCCT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGTGGATTGAAGGTAGATaGTTGTGGCTGCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMWIEGR*LWLLQI
Trigger: AATTTGCAGCAGCCACAACAATCTACCTTCAATCCA...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAAACATGCTTCTGGATaGAAGGTAGATTGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLKHASG*KVDCCG
Trigger: GCCACAACAATCTACCTTCAATCCAGAAGCATGTTT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGATTTGGCATCACCGTaGCATTTACTTGTGATGCAT +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMDLASP*HLLVMH
Trigger: ATGCATCACAAGTAAATGCAACGGTGATGCCAAATC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATCAATGGAGGAAGTTTaGGAGTTTGACGTCCTATTC +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLSMEEV*EFDVLF
Trigger: GAATAGGACGTCAAACTCCAAAACTTCCTCCATTGA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAATTACTGTGGGTATTTaGGGTCTCTGCTCTCAATTC +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLITVGI*GLCSQF
Trigger: GAATTGAGAGCAGAGACCCAAAATACCCACAGTAAT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCTGGTGTTAATCTTCTaGGACGAATCAAATGAGCCT +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMLVLIF*DESNEP
Trigger: AGGCTCATTTGATTCGTCCAAGAAGATTAACACCAG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AACCAAAATAAAGACTTAATACAGCATACAAGAACACTCCTGATCCCACCACCCGATTATCAGTCCTGGTaGAATAAATGCCATTTGAGA +
Preference number: 5 (lower is better)
Translates to: NQNKDLIQHTRTLLIPPPDYQSW*NKCHLR
Trigger: TCTCAAATGGCATTTATTCAACCAGGACTGATAATC...GGGTGGTGGGATCAGGAGTGTTCTTGTATGCTGTATTAAGTCTTTATTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 90 bp GCATCATTAAAGCAATCTTGTTCTTTTCTCTCCTGGAAACCTGGATaGCACAAATCATTACAAGTATCTTCAACTGGCGTATGTAAGTCT +
Preference number: 5 (lower is better)
Translates to: ASLKQSCSFLSWKPG*HKSLQVSSTGVCKS
Trigger: AGACTTACATACGCCAGTTGAAGATACTTGTAATGATTTGTGTCATCCAGGTTTCCAGGAGAGAAAAGAACAAGATTGCTTTAATGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 90 bp AGTTACAGGGCAATTAAATTCATTAACAGGTACTGGTTTCTGGACTaGAATCACTTCTGGCTCATAGGATTTATCTTTGTCATCATTCTC +
Preference number: 5 (lower is better)
Translates to: SYRAIKFINRYWFLD*NHFWLIGFIFVIIL
Trigger: GAGAATGATGACAAAGATAAATCCTATGAGCCAGAAGTGATTCCAGTCCAGAAACCAGTACCTGTTAATGAATTTAATTGCCCTGTAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAAATGCTGCCTGATTTaGCACAGAAAAGGTCATCAA +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLKCCLI*HRKGHQ
Trigger: TTGATGACCTTTTCTGTGCAAAATCAGGCAGCATTT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGATGGAGTTGACACACTaGCTAAATGAGCTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMMELTH*LNELEK
Trigger: TTTTTCCAGCTCATTTAGCAAGTGTGTCAACTCCAT...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGGTATTCGGATGGTCTTaGTCAGTATTTTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMVFGWS*SVFFFC
Trigger: GCAGAAGAAAAATACTGACAAAGACCATCCGAATAC...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATGCACTGAGCTGAGATaGTGCCAAAACTACAAAATT +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLCTELR*CQNYKI
Trigger: AATTTTGTAGTTTTGGCACAATCTCAGCTCAGTGCA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTACGATTAACTTTCCATTaGGTGATGATGTACAAAGAC +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLRLTFH*VMMYKD
Trigger: GTCTTTGTACATCATCACCAAATGGAAAGTTAATCG...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAATTTCCAGTGCATCTTaGCAATCAACTTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLISSAS*QSTSEI
Trigger: GATTTCAGAAGTTGATTGCAAAGATGCACTGGAAAT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAATTTCAAGAAAGCGCTaGGCGTCTTCATTATCTTTA +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLISRKR*ASSLSL
Trigger: TAAAGATAATGAAGACGCCAAGCGCTTTCTTGAAAT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTAAAAGGCAGAACTGTTTaGGTTAGATCTTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLKGRTV*VRSSIC
Trigger: ACAAATGGAAGATCTAACCAAAACAGTTCTGCCTTT...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp CTCCTTTTCCAGAAAAATAGGGCATTCTTTCTGATGTCCCTAGGTATAGTATTATTGTTGTTAAGTCACTaGTTACCAAGTTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LLFQKNRAFFLMSLGIVLLLLSH*LPSFGK
Trigger: CTTCCCAAAACTTGGTAACAAGTGACTTAACAACAA...TAATACTATACCTAGGGACATCAGAAAGAATGCCCTATTTTTCTGGAAAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS-3UTR CAA 90 bp AATATGCAAACTTTGCGGGTTCAGAAGAGGAAAAACTCCTACTTTTTAGTGATGCCTTCACAATCACATTaGTATACACCATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NMQTLRVQKRKNSYFLVMPSQSH*YTPSSS
Trigger: AGAAGAAGATGGTGTATACAAATGTGATTGTGAAGG...CATCACTAAAAAGTAGGAGTTTTTCCTCTTCTGAACCCGCAAAGTTTGCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS CCA 90 bp CTAAAACAATTTTTACATTATCACTGCACTGAAGCTGTGATGGATTaGCAAACTGTACAAACGTTTCGCTTTCTTTACAAGGACATACAT +
Preference number: 5 (lower is better)
Translates to: LKQFLHYHCTEAVMD*QTVQTFRFLYKDIH
Trigger: ATGTATGTCCTTGTAAAGAAAGCGAAACGTTTGTACAGTTTGCCAATCCATCACAGCTTCAGTGCAGTGATAATGTAAAAATTGTTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp GGAAGTGGGCAGCAGCGGCCGAAAGGGGCGGGCTGGTaGAGGCCTGCTCTCGGTCACGTGGGCGCCGCGACG +
Preference number: 6 (lower is better)
Translates to: GSGQQRPKGAGW*RPALGHVGAAT
Trigger: CGTCGCGGCGCCCACGTGACCGAGAGCAGGCCTTCACCAGCCCGCCCCTTTCGGCCGCTGCTGCCCACTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS GCA 72 bp TGTAGCTCCAGCTCCTGGAGCCGCTCGCCCAGGCGCTaGAGCTCCGCGACGCAGCCGCCTTCGCCGCAACTC +
Preference number: 6 (lower is better)
Translates to: CSSSSWSRSPRR*SSATQPPSPQL
Trigger: GAGTTGCGGCGAAGGCGGCTGCGTCGCGGAGCTGCAGCGCCTGGGCGAGCGGCTCCAGGAGCTGGAGCTACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000369578.6
ENST00000392985.3
ENST00000496806.2
ENST00000518845.1
CDS GCA 72 bp GCAGCAGCGGCCGAAAGGGGCGGGCTGGTGAAGGCCTaGTCTCGGTCACGTGGGCGCCGCGACGGGAAAAAG +
Preference number: 6 (lower is better)
Translates to: AAAAERGGLVKA*SRSRGRRDGKK
Trigger: CTTTTTCCCGTCGCGGCGCCCACGTGACCGAGAGCAGGCCTTCACCAGCCCGCCCCTTTCGGCCGCTGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS GCA 72 bp GCGACGCAGCCGCCTTCGCCGCAACTCAACCTCTCCTaGTCGGCCTCTTCGTCCGCCATCTTCACACCCCGC +
Preference number: 6 (lower is better)
Translates to: ATQPPSPQLNLS*SASSSAIFTPR
Trigger: GCGGGGTGTGAAGATGGCGGACGAAGAGGCCGAGCAGGAGAGGTTGAGTTGCGGCGAAGGCGGCTGCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369577.8
ENST00000369578.6
ENST00000392985.3
ENST00000518845.1
CDS CCA 72 bp CTAGGAGTGTCTGGCACAGCTGCTGACAGTAGTCGGTaGCCGCTTCCACGGCCGGTACCCGGCTCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: LGVSGTAADSSR*PLPRPVPGSPA
Trigger: TGCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACTACTGTCAGCAGCTGTGCCAGACACTCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000369578.6
ENST00000496806.2
CDS CCA 72 bp GGAGGGGCGACCCTCTCCGGCGTCCCGATCCCGGCGTaGCTTTCCCCAGTCCACGAAGTCTTCTACGGACAT +
Preference number: 6 (lower is better)
Translates to: GGATLSGVPIPA*LSPVHEVFYGH
Trigger: ATGTCCGTAGAAGACTTCGTGGACTGGGGAAAGCCACGCCGGGATCGGGACGCCGGAGAGGGTCGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392985.3
CDS CCA 72 bp CTTCTGAAATCTGGCACAGCTGCTGACAGTAGTCGGTaGCCGCTTCCACGGCCGGTACCCGGCTCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: LLKSGTAADSSR*PLPRPVPGSPA
Trigger: TGCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACTACTGTCAGCAGCTGTGCCAGATTTCAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518845.1
CDS GCA 72 bp TGGTTGGTCAGCAAGGTGTTTGGATGGCATACAGTGTaGAACAGGGGTGGTACAGTTGGATTTGGCATCACC +
Preference number: 6 (lower is better)
Translates to: WLVSKVFGWHTV*NRGGTVGFGIT
Trigger: GGTGATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp GACGTCCTATTCTGGTTGGTCAGCAAGGTGTTTGGATaGCATACAGTGTGCAACAGGGGTGGTACAGTTGGA +
Preference number: 6 (lower is better)
Translates to: DVLFWLVSKVFG*HTVCNRGGTVG
Trigger: TCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp CAGTGGAGAAACCTGACACATGCTGCCACAGCTAGGTaGTCTAGGTTCACATCAACAGTGATAAGTCGGCTG +
Preference number: 6 (lower is better)
Translates to: QWRNLTHAATAR*SRFTSTVISRL
Trigger: CAGCCGACTTATCACTGTTGATGTGAACCTAGACCACCTAGCTGTGGCAGCATGTGTCAGGTTTCTCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369578.6
CDS CCA 72 bp ATGGAGTTGACACACTTGCTAAATGAGCTGGAAAAATaGGTGGCGAGACATGCTGCAACTGGGCCGAACAAG +
Preference number: 6 (lower is better)
Translates to: MELTHLLNELEK*VARHAATGPNK
Trigger: CTTGTTCGGCCCAGTTGCAGCATGTCTCGCCACCCATTTTTCCAGCTCATTTAGCAAGTGTGTCAACTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp ATACCATTCTCCAATAAAAGGAGCAAGTCCTCCCTAGAGAAACGGTaGATTCCAGGACTCAGGCAGGAAATACGCCAGATGAGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: IPFSNKRSKSSLEKR*IPGLRQEIRQMSLE
Trigger: CTCCAGGCTCATCTGGCGTATTTCCTGCCTGAGTCCTGGAATCAACCGTTTCTCTAGGGAGGACTTGCTCCTTTTATTGGAGAATGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369578.6
CDS CCA 72 bp GGTCCATTAGCTTGCCTGAGCTCAGAGGCAGAAATCTaGTCTTGTTTGGTCACAGCTGATTCTGCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: GPLACLSSEAEI*SCLVTADSALL
Trigger: AAGCAAAGCAGAATCAGCTGTGACCAAACAAGACCAGATTTCTGCCTCTGAGCTCAGGCAAGCTAATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp GCAACAGGGGTGGTACAGTTGGATTTGGCATCACCGTaGCATTTACTTGTGATGCATCAGAGACACAACCTG +
Preference number: 6 (lower is better)
Translates to: ATGVVQLDLASP*HLLVMHQRHNL
Trigger: CAGGTTGTGTCTCTGATGCATCACAAGTAAATGCAACGGTGATGCCAAATCCAACTGTACCACCCCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp GGCATACAGTGTGCAACAGGGGTGGTACAGTTGGATTaGGCATCACCGTTGCATTTACTTGTGATGCATCAG +
Preference number: 6 (lower is better)
Translates to: GIQCATGVVQLD*ASPLHLLVMHQ
Trigger: CTGATGCATCACAAGTAAATGCAACGGTGATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp TCCAATAAAAGGAGCAAGTCCTCCCTAGAGAAACGGTaGATTCCAGGACTCAGGCAGGAAATACGCCAGATG +
Preference number: 6 (lower is better)
Translates to: SNKRSKSSLEKR*IPGLRQEIRQM
Trigger: CATCTGGCGTATTTCCTGCCTGAGTCCTGGAATCAACCGTTTCTCTAGGGAGGACTTGCTCCTTTTATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369578.6
CDS CAA 90 bp GCAAGGTGTTTGGATGGCATACAGTGTGCAACAGGGGTGGTACAGTaGGATTTGGCATCACCGTTGCATTTACTTGTGATGCATCAGAGA +
Preference number: 6 (lower is better)
Translates to: ARCLDGIQCATGVVQ*DLASPLHLLVMHQR
Trigger: TCTCTGATGCATCACAAGTAAATGCAACGGTGATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp CATTCCTCAATGGAGGAAGTTTTGGAGTTTGACGTCCTATTCTGGTaGGTCAGCAAGGTGTTTGGATGGCATACAGTGTGCAACAGGGGT +
Preference number: 6 (lower is better)
Translates to: HSSMEEVLEFDVLFW*VSKVFGWHTVCNRG
Trigger: ACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp GGTCCATTAGCTTGCCTGAGCTCAGAGGCAGAAATCTGGTCTTGTTaGGTCACAGCTGATTCTGCTTTGCTTTTATCCCAAGCATCACTT +
Preference number: 6 (lower is better)
Translates to: GPLACLSSEAEIWSC*VTADSALLLSQASL
Trigger: AAGTGATGCTTGGGATAAAAGCAAAGCAGAATCAGCTGTGACCAAACAAGACCAGATTTCTGCCTCTGAGCTCAGGCAAGCTAATGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp TGTTTGGATGGCATACAGTGTGCAACAGGGGTGGTACAGTTGGATTaGGCATCACCGTTGCATTTACTTGTGATGCATCAGAGACACAAC +
Preference number: 6 (lower is better)
Translates to: CLDGIQCATGVVQLD*ASPLHLLVMHQRHN
Trigger: GTTGTGTCTCTGATGCATCACAAGTAAATGCAACGGTGATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp AAGTTTTGGAGTTTGACGTCCTATTCTGGTTGGTCAGCAAGGTGTTaGGATGGCATACAGTGTGCAACAGGGGTGGTACAGTTGGATTTG +
Preference number: 6 (lower is better)
Translates to: KFWSLTSYSGWSARC*DGIQCATGVVQLDL
Trigger: CAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp AATTATAGGTTCGAGTACATCCCTCGACCTGGCAGCTaGATTTCTGAACTGGAGCTTTTGGAGGCACTGATG +
Preference number: 6 (lower is better)
Translates to: NYRFEYIPRPGS*ISELELLEALM
Trigger: CATCAGTGCCTCCAAAAGCTCCAGTTCAGAAATTCAGCTGCCAGGTCGAGGGATGTACTCGAACCTATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp GCTGCTACATTCCTCAATGGAGGAAGTTTTGGAGTTTaGCGTCCTATTCTGGTTGGTCAGCAAGGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: AATFLNGGSFGV*RPILVGQQGVW
Trigger: CCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp TGGAGGAAGTTTTGGAGTTTGACGTCCTATTCTGGTTaGTCAGCAAGGTGTTTGGATGGCATACAGTGTGCA +
Preference number: 6 (lower is better)
Translates to: WRKFWSLTSYSG*SARCLDGIQCA
Trigger: TGCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp GCTTGCCTGAGCTCAGAGGCAGAAATCTGGTCTTGTTaGGTCACAGCTGATTCTGCTTTGCTTTTATCCCAA +
Preference number: 6 (lower is better)
Translates to: ACLSSEAEIWSC*VTADSALLLSQ
Trigger: TTGGGATAAAAGCAAAGCAGAATCAGCTGTGACCAAACAAGACCAGATTTCTGCCTCTGAGCTCAGGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp TTGGATGGCATACAGTGTGCAACAGGGGTGGTACAGTaGGATTTGGCATCACCGTTGCATTTACTTGTGATG +
Preference number: 6 (lower is better)
Translates to: LDGIQCATGVVQ*DLASPLHLLVM
Trigger: CATCACAAGTAAATGCAACGGTGATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTATGCCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp ATGGAGGAAGTTTTGGAGTTTGACGTCCTATTCTGGTaGGTCAGCAAGGTGTTTGGATGGCATACAGTGTGC +
Preference number: 6 (lower is better)
Translates to: MEEVLEFDVLFW*VSKVFGWHTVC
Trigger: GCACACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp ACAGGCAAGCTGCTACATTCCTCAATGGAGGAAGTTTaGGAGTTTGACGTCCTATTCTGGTTGGTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: TGKLLHSSMEEV*EFDVLFWLVSK
Trigger: CTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp AAACAGGCAAGCTGCTACATTCCTCAATGGAGGAAGTTTTGGAGTTaGACGTCCTATTCTGGTTGGTCAGCAAGGTGTTTGGATGGCATA +
Preference number: 6 (lower is better)
Translates to: KQASCYIPQWRKFWS*TSYSGWSARCLDGI
Trigger: TATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp GTTGGAAAAACAGGCAAGCTGCTACATTCCTCAATGGAGGAAGTTTaGGAGTTTGACGTCCTATTCTGGTTGGTCAGCAAGGTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: VGKTGKLLHSSMEEV*EFDVLFWLVSKVFG
Trigger: TCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTTTTTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp AGTTCCCAAGCGCAGTACATATCTCCTTGTTGGAGCTaGCGTGACAAAAACGCAGTACATAAAACAAGAGCG +
Preference number: 6 (lower is better)
Translates to: SSQAQYISPCWS*RDKNAVHKTRA
Trigger: CGCTCTTGTTTTATGTACTGCGTTTTTGTCACGTCAGCTCCAACAAGGAGATATGTACTGCGCTTGGGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000466062.2
CDS TCA 72 bp CATTACAAGTATCTTCAACTGGCGTATGTAAGTCTGTaGCCAGTGCTTCACCACTGCCTTCCACAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: HYKYLQLAYVSL*PVLHHCLPQLS
Trigger: ACTCAACTGTGGAAGGCAGTGGTGAAGCACTGGTCACAGACTTACATACGCCAGTTGAAGATACTTGTAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp ATTGAGGACAACAATGGAGTTGACACACTTGCTAAATaGGCTGGAAAAATGGGTGGCGAGACATGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: IEDNNGVDTLAK*AGKMGGETCCN
Trigger: GTTGCAGCATGTCTCGCCACCCATTTTTCCAGCTCATTTAGCAAGTGTGTCAACTCCATTGTTGTCCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp CTCCAGTCAAAAGATGCAGGATGCTCCTCAATGGTTTaGATGGCAACAGCAGTTTCTTCTTCTTTACGCACG +
Preference number: 6 (lower is better)
Translates to: LQSKDAGCSSMV*MATAVSSSLRT
Trigger: CGTGCGTAAAGAAGAAGAAACTGCTGTTGCCATTCAAACCATTGAGGAGCATCCTGCATCTTTTGACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp TCAATGGAGGAAGTTTTGGAGTTTGACGTCCTATTCTaGTTGGTCAGCAAGGTGTTTGGATGGCATACAGTG +
Preference number: 6 (lower is better)
Translates to: SMEEVLEFDVLF*LVSKVFGWHTV
Trigger: CACTGTATGCCATCCAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp CCTGGATGGAATCCTTTATCCTTATCCAATGGTTCCTaGGAAAGAATAGTGCACAGTACCGGGTTTTTCCAC +
Preference number: 6 (lower is better)
Translates to: PGWNPLSLSNGS*ERIVHSTGFFH
Trigger: GTGGAAAAACCCGGTACTGTGCACTATTCTTTCCCAGGAACCATTGGATAAGGATAAAGGATTCCATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369578.6
ENST00000485016.2
ENST00000524067.5
CDS CCA 72 bp TATAACATGGAAAGGGAGAAAAGAGTAACTTCACAGTaGAGAAACCTGACACATGCTGCCACAGCTAGGTGG +
Preference number: 6 (lower is better)
Translates to: YNMEREKRVTSQ*RNLTHAATARW
Trigger: CCACCTAGCTGTGGCAGCATGTGTCAGGTTTCTCCACTGTGAAGTTACTCTTTTCTCCCTTTCCATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369578.6
CDS CAA 72 bp AGCTGCTACATTCCTCAATGGAGGAAGTTTTGGAGTTaGACGTCCTATTCTGGTTGGTCAGCAAGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: SCYIPQWRKFWS*TSYSGWSARCL
Trigger: CAAACACCTTGCTGACCAACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp GCTCCAGTCAAAAGATGCAGGATGCTCCTCAATGGTTaGAATGGCAACAGCAGTTTCTTCTTCTTTACGCAC +
Preference number: 6 (lower is better)
Translates to: APVKRCRMLLNG*NGNSSFFFFTH
Trigger: GTGCGTAAAGAAGAAGAAACTGCTGTTGCCATTCAAACCATTGAGGAGCATCCTGCATCTTTTGACTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp GCATCACCGTTGCATTTACTTGTGATGCATCAGAGACACAACCTGTaGAAACATGAGAAAGCATTTCGGCACCCTCAAATGTACTGGGAA +
Preference number: 6 (lower is better)
Translates to: ASPLHLLVMHQRHNL*KHEKAFRHPQMYWE
Trigger: TTCCCAGTACATTTGAGGGTGCCGAAATGCTTTCTCATGTTTCAACAGGTTGTGTCTCTGATGCATCACAAGTAAATGCAACGGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp ATACAGTGTGCAACAGGGGTGGTACAGTTGGATTTGGCATCACCGTaGCATTTACTTGTGATGCATCAGAGACACAACCTGTTGAAACAT +
Preference number: 6 (lower is better)
Translates to: IQCATGVVQLDLASP*HLLVMHQRHNLLKH
Trigger: ATGTTTCAACAGGTTGTGTCTCTGATGCATCACAAGTAAATGCAACGGTGATGCCAAATCCAACTGTACCACCCCTGTTGCACACTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp GGTCGCTGCTCCTGTTTAGCCACAGTATTAGTCTTCTaGTTTTCATTGGTAGTTGTGATCTTTGGAGGCCTT +
Preference number: 6 (lower is better)
Translates to: GRCSCLATVLVF*FSLVVVIFGGL
Trigger: AAGGCCTCCAAAGATCACAACTACCAATGAAAATCAGAAGACTAATACTGTGGCTAAACAGGAGCAGCGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp CTCAGAGGCAGAAATCTGGTCTTGTTTGGTCACAGCTaGTTCTGCTTTGCTTTTATCCCAAGCATCACTTCT +
Preference number: 6 (lower is better)
Translates to: LRGRNLVLFGHS*FCFAFIPSITS
Trigger: AGAAGTGATGCTTGGGATAAAAGCAAAGCAGAATCAGCTGTGACCAAACAAGACCAGATTTCTGCCTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp ACTTGTGATGCATCAGAGACACAACCTGTTGAAACATaGGAAAGCATTTCGGCACCCTCAAATGTACTGGGA +
Preference number: 6 (lower is better)
Translates to: TCDASETQPVET*ESISAPSNVLG
Trigger: TCCCAGTACATTTGAGGGTGCCGAAATGCTTTCTCATGTTTCAACAGGTTGTGTCTCTGATGCATCACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp CTGAGCCACTGTCAATATTCAAAGGCAGAACTGTTTTaGTTAGATCTTCCATTTGTGCTGGCAAGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: LSHCQYSKAELF*LDLPFVLARQY
Trigger: GTACTGCCTTGCCAGCACAAATGGAAGATCTAACCAAAACAGTTCTGCCTTTGAATATTGACAGTGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp TCGTTGGAAAAACAGGCAAGCTGCTACATTCCTCAATaGAGGAAGTTTTGGAGTTTGACGTCCTATTCTGGT +
Preference number: 6 (lower is better)
Translates to: SLEKQASCYIPQ*RKFWSLTSYSG
Trigger: ACCAGAATAGGACGTCAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTTTTTCCAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp AAGAGCTCCAGTCAAAAGATGCAGGATGCTCCTCAATaGTTTGAATGGCAACAGCAGTTTCTTCTTCTTTAC +
Preference number: 6 (lower is better)
Translates to: KSSSQKMQDAPQ*FEWQQQFLLLY
Trigger: GTAAAGAAGAAGAAACTGCTGTTGCCATTCAAACCATTGAGGAGCATCCTGCATCTTTTGACTGGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp ACAAAATGCCGCCTACAGTACTGGCAAATAACTTTTTaGCTCTGCATTTCAAGAAAGCGCTTGGCGTCTTCA +
Preference number: 6 (lower is better)
Translates to: TKCRLQYWQITF*LCISRKRLASS
Trigger: TGAAGACGCCAAGCGCTTTCTTGAAATGCAGAGCAAAAAAGTTATTTGCCAGTACTGTAGGCGGCATTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp TCTGAGCCACTGTCAATATTCAAAGGCAGAACTGTTTaGGTTAGATCTTCCATTTGTGCTGGCAAGGCAGTA +
Preference number: 6 (lower is better)
Translates to: SEPLSIFKGRTV*VRSSICAGKAV
Trigger: TACTGCCTTGCCAGCACAAATGGAAGATCTAACCAAAACAGTTCTGCCTTTGAATATTGACAGTGGCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp AGGAAAGGATCTGAGCCACTGTCAATATTCAAAGGCAGAACTGTTTaGGTTAGATCTTCCATTTGTGCTGGCAAGGCAGTACTAGGTAAA +
Preference number: 6 (lower is better)
Translates to: RKGSEPLSIFKGRTV*VRSSICAGKAVLGK
Trigger: TTTACCTAGTACTGCCTTGCCAGCACAAATGGAAGATCTAACCAAAACAGTTCTGCCTTTGAATATTGACAGTGGCTCAGATCCTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp AGCCTTCACAATCACATTTGTATACACCATCTTCTTCTGTTTTACTaGCCCTTAGTCCAATCCCGTGGTCTGCCTCTAGATGAACAACAT +
Preference number: 6 (lower is better)
Translates to: SLHNHICIHHLLLFY*PLVQSRGLPLDEQH
Trigger: ATGTTGTTCATCTAGAGGCAGACCACGGGATTGGACTAAGGGCAAGTAAAACAGAAGAAGATGGTGTATACAAATGTGATTGTGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000496806.2
CDS CAA 90 bp TTCGACCGGGTTGCATATATACGGTCACAGCCTTCACAATCACATTaGTATACACCATCTTCTTCTGTTTTACTTGCCCTTAGTCCAATC +
Preference number: 6 (lower is better)
Translates to: FDRVAYIRSQPSQSH*YTPSSSVLLALSPI
Trigger: GATTGGACTAAGGGCAAGTAAAACAGAAGAAGATGGTGTATACAAATGTGATTGTGAAGGCTGTGACCGTATATATGCAACCCGGTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000496806.2
CDS TCA 72 bp GAGTTTTCTTGCTTTCCAAAGTTATCCTCAATCCCCTaGTTGAGAGACACCTTAATGGACACAGCTACTTCA +
Preference number: 6 (lower is better)
Translates to: EFSCFPKLSSIP*LRDTLMDTATS
Trigger: TGAAGTAGCTGTGTCCATTAAGGTGTCTCTCAATCAGGGGATTGAGGATAACTTTGGAAAGCAAGAAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp AAAAACTGTCACAGCCAAGAGGAGCCTAAGAAGACATaGCGACTAAATGTAATGTGGTATCCTGGATGGAAT +
Preference number: 6 (lower is better)
Translates to: KNCHSQEEPKKT*RLNVMWYPGWN
Trigger: ATTCCATCCAGGATACCACATTACATTTAGTCGTCATGTCTTCTTAGGCTCCTCTTGGCTGTGACAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369578.6
ENST00000485016.2
ENST00000524067.5
CDS GCA 72 bp ATTGAAGGTAGATTGTTGTGGCTGCTGCAAATTTACTaGATTTGTGGAGAGAATCATGCTGGCAAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: IEGRLLWLLQIY*ICGENHAGKKR
Trigger: TCTCTTCTTGCCAGCATGATTCTCTCCACAAATGCAGTAAATTTGCAGCAGCCACAACAATCTACCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 72 bp TCAGTAGTAAGTCATTCGTTGGAAAAACAGGCAAGCTaGTACATTCCTCAATGGAGGAAGTTTTGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: SVVSHSLEKQAS*YIPQWRKFWSL
Trigger: CAAACTCCAAAACTTCCTCCATTGAGGAATGTAGCAGCTTGCCTGTTTTTCCAACGAATGACTTACTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 72 bp CTTATTAAAAATGTGTCGGAGGAGATTCGACCGGGTTaGATATATACGGTCACAGCCTTCACAATCACATTT +
Preference number: 6 (lower is better)
Translates to: LIKNVSEEIRPG*IYTVTAFTITF
Trigger: AAATGTGATTGTGAAGGCTGTGACCGTATATATGCAACCCGGTCGAATCTCCTCCGACACATTTTTAATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000496806.2
CDS GCA 72 bp GTGTCAGAATCTTTCACATCATTCTTAGCACCTTCTTaGTCAGACGTTTCCTTTACTTGTGAGTTGCAACAC +
Preference number: 6 (lower is better)
Translates to: VSESFTSFLAPS*SDVSFTCELQH
Trigger: GTGTTGCAACTCACAAGTAAAGGAAACGTCTGAGCAAGAAGGTGCTAAGAATGATGTGAAAGATTCTGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp TTCTTTGTCACACAACACACAATACTGCATGTAGGCTaGCCAATTCCTAAACCGAGCAGATATAAATCCCCT +
Preference number: 6 (lower is better)
Translates to: FFVTQHTILHVG*PIPKPSRYKSP
Trigger: AGGGGATTTATATCTGCTCGGTTTAGGAATTGGCAAGCCTACATGCAGTATTGTGTGTTGTGTGACAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp GCACCTTCTTGCTCAGACGTTTCCTTTACTTGTGAGTaGCAACACCGTTTGAATACAATAAGAAGATTTCGG +
Preference number: 6 (lower is better)
Translates to: APSCSDVSFTCE*QHRLNTIRRFR
Trigger: CCGAAATCTTCTTATTGTATTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACGTCTGAGCAAGAAGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp GTAACACTCACAAAATGCCGCCTACAGTACTGGCAAATAACTTTTTaGCTCTGCATTTCAAGAAAGCGCTTGGCGTCTTCATTATCTTTA +
Preference number: 6 (lower is better)
Translates to: VTLTKCRLQYWQITF*LCISRKRLASSLSL
Trigger: TAAAGATAATGAAGACGCCAAGCGCTTTCTTGAAATGCAGAGCAAAAAAGTTATTTGCCAGTACTGTAGGCGGCATTTTGTGAGTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 72 bp ACACCTGCTACAGATAAATTTCCCATCTCTGATAATTaGAGGCCATTTAGCCCTTTTGTTGTGCTTAGGTTT +
Preference number: 6 (lower is better)
Translates to: TPATDKFPISDN*RPFSPFVVLRF
Trigger: AAACCTAAGCACAACAAAAGGGCTAAATGGCCTGCAATTATCAGAGATGGGAAATTTATCTGTAGCAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp AACCATTTTCAACAGTCTTCAGTAGTAAGTCATTCGTaGGAAAAACAGGCAAGCTGCTACATTCCTCAATGG +
Preference number: 6 (lower is better)
Translates to: NHFQQSSVVSHS*EKQASCYIPQW
Trigger: CCATTGAGGAATGTAGCAGCTTGCCTGTTTTTCCAACGAATGACTTACTACTGAAGACTGTTGAAAATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp GCAAGAAGCTGTAGAAATGATGGATCTTTAAAACATGCTTCTGGATaGAAGGTAGATTGTTGTGGCTGCTGCAAATTTACTGCATTTGTG +
Preference number: 6 (lower is better)
Translates to: ARSCRNDGSLKHASG*KVDCCGCCKFTAFV
Trigger: CACAAATGCAGTAAATTTGCAGCAGCCACAACAATCTACCTTCAATCCAGAAGCATGTTTTAAAGATCCATCATTTCTACAGCTTCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp AATGCCAGCAGTTTCCAAAGCCTGTTTAATAATTTCACTACCTTCTaGACTGACACTGGTATTAAAGTTAGTCACACCAGATCGAGGAAA +
Preference number: 6 (lower is better)
Translates to: NASSFQSLFNNFTTF*TDTGIKVSHTRSRK
Trigger: TTTCCTCGATCTGGTGTGACTAACTTTAATACCAGTGTCAGTCAAGAAGGTAGTGAAATTATTAAACAGGCTTTGGAAACTGCTGGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp CCTTCTTGCTCAGACGTTTCCTTTACTTGTGAGTTGCAACACCGTTaGAATACAATAAGAAGATTTCGGTGTTGTGATGTAAATGCCTTA +
Preference number: 6 (lower is better)
Translates to: PSCSDVSFTCELQHR*NTIRRFRCCDVNAL
Trigger: TAAGGCATTTACATCACAACACCGAAATCTTCTTATTGTATTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACGTCTGAGCAAGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 90 bp TCATTCTTAGCACCTTCTTGCTCAGACGTTTCCTTTACTTGTGAGTaGCAACACCGTTTGAATACAATAAGAAGATTTCGGTGTTGTGAT +
Preference number: 6 (lower is better)
Translates to: SFLAPSCSDVSFTCE*QHRLNTIRRFRCCD
Trigger: ATCACAACACCGAAATCTTCTTATTGTATTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACGTCTGAGCAAGAAGGTGCTAAGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp GCTCACCCTGAGAACGATAAACTTTACCACAACCTGTaGACTTACAAGTGTACGTATTATAATGTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: AHPENDKLYHNL*TYKCTYYNVVL
Trigger: AAGCACAACATTATAATACGTACACTTGTAAGTTCACAGGTTGTGGTAAAGTTTATCGTTCTCAGGGTGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp AAGCAATCTTGTTCTTTTCTCTCCTGGAAACCTGGATaGCACAAATCATTACAAGTATCTTCAACTGGCGTA +
Preference number: 6 (lower is better)
Translates to: KQSCSFLSWKPG*HKSLQVSSTGV
Trigger: TACGCCAGTTGAAGATACTTGTAATGATTTGTGTCATCCAGGTTTCCAGGAGAGAAAAGAACAAGATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp CTTAGCACCTTCTTGCTCAGACGTTTCCTTTACTTGTaGGTTGCAACACCGTTTGAATACAATAAGAAGATT +
Preference number: 6 (lower is better)
Translates to: LSTFLLRRFLYL*VATPFEYNKKI
Trigger: AATCTTCTTATTGTATTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACGTCTGAGCAAGAAGGTGCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS GCA 72 bp ACTGATGGAGTTCCTAATGAATTACTTAGGTCGGACTaGGGTGGAACAAATGCAATACTTTCTAATGTCTTA +
Preference number: 6 (lower is better)
Translates to: TDGVPNELLRSD*GGTNAILSNVL
Trigger: TAAGACATTAGAAAGTATTGCATTTGTTCCACCGCAGTCCGACCTAAGTAATTCATTAGGAACTCCATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp AAAAATTCATTCACTTTATCCTTATCCAATGGTTCCTaGGAAAGAATAGTGCACAGTACCGGGTTTTTCCAC +
Preference number: 6 (lower is better)
Translates to: KNSFTLSLSNGS*ERIVHSTGFFH
Trigger: GTGGAAAAACCCGGTACTGTGCACTATTCTTTCCCAGGAACCATTGGATAAGGATAAAGTGAATGAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369577.8
CDS TCA 72 bp CACCAAACTCTGAGGTTCACAAGTTGGAATTACATTTaGATGAAGGTTAGTAGTTGGGATTTCAACACTCTT +
Preference number: 6 (lower is better)
Translates to: HQTLRFTSWNYI*MKVSSWDFNTL
Trigger: AAGAGTGTTGAAATCCCAACTACTAACCTTCATTCAAATGTAATTCCAACTTGTGAACCTCAGAGTTTGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp CTTCACTGTCATTTAGTTCATCTATTGAAGACACAATaGATGCTTCTTCTCCCATTAATGCAAGACATTGTC +
Preference number: 6 (lower is better)
Translates to: LHCHLVHLLKTQ*MLLLPLMQDIV
Trigger: GACAATGTCTTGCATTAATGGGAGAAGAAGCATCCATTGTGTCTTCAATAGATGAACTAAATGACAGTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp GCAATTAAATTCATTAACAGGTACTGGTTTCTGGACTaGAATCACTTCTGGCTCATAGGATTTATCTTTGTC +
Preference number: 6 (lower is better)
Translates to: AIKFINRYWFLD*NHFWLIGFIFV
Trigger: GACAAAGATAAATCCTATGAGCCAGAAGTGATTCCAGTCCAGAAACCAGTACCTGTTAATGAATTTAATTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CCA 72 bp TTTAAAACATGCTTCTGGATTGAAGGTAGATTGTTGTaGCTGCTGCAAATTTACTGCATTTGTGGAGAGAAT +
Preference number: 6 (lower is better)
Translates to: FKTCFWIEGRLL*LLQIYCICGEN
Trigger: ATTCTCTCCACAAATGCAGTAAATTTGCAGCAGCCACAACAATCTACCTTCAATCCAGAAGCATGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp TGCTTGACATATTTTCCTGGCCTGGTGTTAATCTTCTaGGACGAATCAAATGAGCCTTATGTTTGTCATTAT +
Preference number: 6 (lower is better)
Translates to: CLTYFPGLVLIF*DESNEPYVCHY
Trigger: ATAATGACAAACATAAGGCTCATTTGATTCGTCCAAGAAGATTAACACCAGGCCAGGAAAATATGTCAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339907.8
ENST00000369577.8
ENST00000496806.2
CDS CAA 72 bp TCAGACGTTTCCTTTACTTGTGAGTTGCAACACCGTTaGAATACAATAAGAAGATTTCGGTGTTGTGATGTA +
Preference number: 6 (lower is better)
Translates to: SDVSFTCELQHR*NTIRRFRCCDV
Trigger: TACATCACAACACCGAAATCTTCTTATTGTATTCAAACGGTGTTGCAACTCACAAGTAAAGGAAACGTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp GTTTCCAAAGCCTGTTTAATAATTTCACTACCTTCTTaGCTGACACTGGTATTAAAGTTAGTCACACCAGAT +
Preference number: 6 (lower is better)
Translates to: VSKACLIISLPS*LTLVLKLVTPD
Trigger: ATCTGGTGTGACTAACTTTAATACCAGTGTCAGTCAAGAAGGTAGTGAAATTATTAAACAGGCTTTGGAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp TGTAGAAATGATGGATCTTTAAAACATGCTTCTGGATaGAAGGTAGATTGTTGTGGCTGCTGCAAATTTACT +
Preference number: 6 (lower is better)
Translates to: CRNDGSLKHASG*KVDCCGCCKFT
Trigger: AGTAAATTTGCAGCAGCCACAACAATCTACCTTCAATCCAGAAGCATGTTTTAAAGATCCATCATTTCTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS CAA 72 bp AGTTTCCAAAGCCTGTTTAATAATTTCACTACCTTCTaGACTGACACTGGTATTAAAGTTAGTCACACCAGA +
Preference number: 6 (lower is better)
Translates to: SFQSLFNNFTTF*TDTGIKVSHTR
Trigger: TCTGGTGTGACTAACTTTAATACCAGTGTCAGTCAAGAAGGTAGTGAAATTATTAAACAGGCTTTGGAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8
CDS TCA 72 bp TGTACAAACGTTTCGCTTTCTTTACAAGGACATACATaGTTTCCACTAGTCACAGCAGTCTTATCAATATTT +
Preference number: 6 (lower is better)
Translates to: CTNVSLSLQGHT*FPLVTAVLSIF
Trigger: AAATATTGATAAGACTGCTGTGACTAGTGGAAATCATGTATGTCCTTGTAAAGAAAGCGAAACGTTTGTACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339907.8
ENST00000369577.8