RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF281 (Homo sapiens)

Ensembl gene IDs: ENSG00000162702

Ensembl transcript IDs: ENST00000294740.3, ENST00000367352.3, ENST00000367353.2

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACCACTTGGGCTTCAACACTGTACTAGATGTCAGTAGAATCGCTTaGTGGAATTACAGCCTTGTTACAGTTGAGATCAAGAGAGGGTGC +
Preference number: 1 (lower is better)
Translates to: NHLGFNTVLDVSRIA*WNYSLVTVEIKRGC
Trigger: GCACCCTCTCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACATCTAGTACAGTGTTGAAGCCCAAGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR CCA 90 bp ATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTaGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTTT +
Preference number: 1 (lower is better)
Translates to: ISRHILIPHRSYVTS*NYNLINIYPRTRGF
Trigger: AAAACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR TCA 90 bp TTCATTAAAATGTACATTAAAGGCCGCAATTTCACAAAGAGGTTCTaGTGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGAG +
Preference number: 1 (lower is better)
Translates to: FIKMYIKGRNFTKRF*CYYYKQTHSYPSQE
Trigger: CTCCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTGTGAAATTGCGGCCTTTAATGTACATTTTAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR TCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTACAGCCTTGTTACAGTTaGGATCAAGAGAGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: YKQTHSYPSQELCHQLELQPCYS*DQERVL
Trigger: AAGCACCCTCTCTTGATCTCAACTGTAACAAGGCTG...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR CAA 90 bp ATCATACAGCTTAAGAGATACAGTGGTAAAGGTCCTCTCCATCCTTaGATTACAGCTTGTACTCTGTACTCAATAGAACTTACCGCACTT +
Preference number: 2 (lower is better)
Translates to: IIQLKRYSGKGPLHP*ITACTLYSIELTAL
Trigger: AAGTGCGGTAAGTTCTATTGAGTACAGAGTACAAGCTGTAATCAAAGGATGGAGAGGACCTTTACCACTGTATCTCTTAAGCTGTATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR TCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAATTTGGGCTATTCCCTaGCGATCTATACATGTAAAT +
Preference number: 2 (lower is better)
Translates to: REKEGPRTLKERLRTRTKIWAIP*RSIHVN
Trigger: ATTTACATGTATAGATCGTCAGGGAATAGCCCAAAT...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGACAATCTCAGAATTTTaGATCAGCCCAGATGGAGAT +
Preference number: 2 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWTISEF*ISPDGD
Trigger: ATCTCCATCTGGGCTGATCCAAAATTCTGAGATTGT...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAACAATCTCAGAATTTTaGATCAGCCCAGATGGAGAT +
Preference number: 2 (lower is better)
Translates to: MSVESLDGITALLQLRSRTISEF*ISPDGD
Trigger: ATCTCCATCTGGGCTGATCCAAAATTCTGAGATTGT...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR TCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAGTCAGTAGAATCGCTTaGTGGAATTACAGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: CTILITLLYMEACGRLITVSRIA*WNYSLV
Trigger: AACAAGGCTGTAATTCCATCAAGCGATTCTACTGAC...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR TCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTATTTGGGCTATTCCCTaGCGATCTATACATGTAAAT +
Preference number: 2 (lower is better)
Translates to: MSPVGITTLLISIQEHGVIWAIP*RSIHVN
Trigger: ATTTACATGTATAGATCGTCAGGGAATAGCCCAAAT...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAACAGCCTTGTTACAGTaGAGATCAAGAGAGGGTGCT +
Preference number: 3 (lower is better)
Translates to: YKQTHSYPSQELCHQLELTALLQ*RSREGA
Trigger: AGCACCCTCTCTTGATCTCAACTGTAACAAGGCTGT...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGACAGCCTTGTTACAGTaGAGATCAAGAGAGGGTGCT +
Preference number: 3 (lower is better)
Translates to: QRGSDVITISRHILIPHRTALLQ*RSREGA
Trigger: AGCACCCTCTCTTGATCTCAACTGTAACAAGGCTGT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR TCA 72 bp GGCTTCAACACTGTACTAGATGTCAGTAGAATCGCTTaGTGGAATTACAGCCTTGTTACAGTTGAGATCAAG +
Preference number: 3 (lower is better)
Translates to: GFNTVLDVSRIA*WNYSLVTVEIK
Trigger: CTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACATCTAGTACAGTGTTGAAGCC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGAACCAGCCAACCACTaGGGCTTCAACACTGTACTA +
Preference number: 3 (lower is better)
Translates to: SYVTSWNYNLINIYPRTREPANH*GFNTVL
Trigger: TAGTACAGTGTTGAAGCCCAAGTGGTTGGCTGGTTC...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATTGCGTTTAAAACATTaGGGCTATTCCCTGACGATC +
Preference number: 3 (lower is better)
Translates to: YKQTHSYPSQELCHQLELLRLKH*GYSLTI
Trigger: GATCGTCAGGGAATAGCCCAAATGTTTTAAACGCAA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGAACAATCTCAGAATTTaGGATCAGCCCAGATGGAGA +
Preference number: 3 (lower is better)
Translates to: QRGSDVITISRHILIPHRNNLRI*DQPRWR
Trigger: TCTCCATCTGGGCTGATCCAAAATTCTGAGATTGTT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAAACAATCTCAGAATTTaGGATCAGCCCAGATGGAGA +
Preference number: 3 (lower is better)
Translates to: MSVESLDGITALLQLRSRNNLRI*DQPRWR
Trigger: TCTCCATCTGGGCTGATCCAAAATTCTGAGATTGTT...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGGATGGAATTACAGCCTaGTTACAGTTGAGATCAAGA +
Preference number: 3 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWDGITA*LQLRSR
Trigger: TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATC...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTATTGCGTTTAAAACATTaGGGCTATTCCCTGACGATC +
Preference number: 3 (lower is better)
Translates to: QNRCRPCIINNACPKFQLLRLKH*GYSLTI
Trigger: GATCGTCAGGGAATAGCCCAAATGTTTTAAACGCAA...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGAAGATCCAAGAATATTaGTTCTACCAGGCTGGAATG +
Preference number: 3 (lower is better)
Translates to: QRGSDVITISRHILIPHRKIQEY*FYQAGM
Trigger: CATTCCAGCCTGGTAGAACAAATATTCTTGGATCTT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR-3UTR CAA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTCTATCATTCCAGGCTTaGATCAAAGATCCAAGAATA +
Preference number: 3 (lower is better)
Translates to: MSPVGITTLLISIQEHGVLSFQA*IKDPRI
Trigger: TATTCTTGGATCTTTGATCAAAGCCTGGAATGATAG...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR CCA 72 bp TTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTaGAATGAATGTGGTTTGGAAGTTCAGAGTACATTT +
Preference number: 3 (lower is better)
Translates to: LIKDPRIFVLPG*NECGLEVQSTF
Trigger: AAATGTACTCTGAACTTCCAAACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR CCA 72 bp CACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTaGAATTACAACCTTATTAATATCTATCCAAGAACA +
Preference number: 3 (lower is better)
Translates to: HILIPHRSYVTS*NYNLINIYPRT
Trigger: TGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCACCCCAGGAGGTCCTCTaGGAGGGGAAGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPPQEVL*EGKAAA
Trigger: AGCCGCGGCCTTCCCCTCGCAGAGGACCTCCTGGGG...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCCCAGGAGGTCCTCTaGGAGGGGAAGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPQEVL*EGKAAA
Trigger: AGCCGCGGCCTTCCCCTCGCAGAGGACCTCCTGGGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTACCCCAGGAGGTCCTCTaGGAGGGGAAGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLPQEVL*EGKAAA
Trigger: AGCCGCGGCCTTCCCCTCGCAGAGGACCTCCTGGGG...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAGGTGGGTTCCATCTCTaGCCTCCTGCCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELGGFHL*PPAAAA
Trigger: GGCAGCAGCGGCAGGAGGGCAGAGATGGAACCCACC...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCAGCGGCCGGGGCCTaGGGAAAGGTGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSAAGA*GKVGSI
Trigger: GATGGAACCCACCTTTCCCCAGGCCCCGGCCGCTGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367352.3
CDS-3UTR TCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTCCGCCGGCTCCTTCTTaGAAGTCATGTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGPPAPS*KSCPGL
Trigger: CAGCCCCGGACATGACTTTCAAGAAGGAGCCGGCGG...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCGCCGGCTCCTTCTTaGAAGTCATGTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPPAPS*KSCPGL
Trigger: CAGCCCCGGACATGACTTTCAAGAAGGAGCCGGCGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGACCGCCGGCTCCTTCTTaGAAGTCATGTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRPPAPS*KSCPGL
Trigger: CAGCCCCGGACATGACTTTCAAGAAGGAGCCGGCGG...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAAAGCCTCCCGTGTACTaGGCAGCCGCGGCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLKPPVY*AAAAQC
Trigger: ACACTGCGCCGCGGCTGCGCAGTACACGGGAGGCTT...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294740.3
CDS-3UTR GCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATGGTGGTGGGACTGCTaGTCCTCAGGATCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELWWWDC*SSGSAG
Trigger: ACCCGCGGATCCTGAGGAGCAGCAGTCCCACCACCA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGGTGGTGGGACTGCTaGTCCTCAGGATCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVWWWDC*SSGSAG
Trigger: ACCCGCGGATCCTGAGGAGCAGCAGTCCCACCACCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGGTGGTGGTGGGACTaGTGCTCCTCAGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVWWWWD*CSSGSA
Trigger: CGCGGATCCTGAGGAGCAGCAGTCCCACCACCACCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGACGTCACGGTGGTGCTaGGCTGGTTGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWTSRWC*AGCCWT
Trigger: TGTCCAGCAGCAACCAGCCCAGCACCACCGTGACGT...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGACGTCACGGTGGTGCTaGGCTGGTTGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMETSRWC*AGCCWT
Trigger: TGTCCAGCAGCAACCAGCCCAGCACCACCGTGACGT...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGGCCTGGGGAAAGGTaGGTTCCATCTCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGPGER*VPSLPS
Trigger: GGAGGGCAGAGATGGAACCCACCTTTCCCCAGGCCC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367352.3
CDS-3UTR GCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTATGGTGGTGGGACTGCTaGTCCTCAGGATCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLWWWDC*SSGSAG
Trigger: ACCCGCGGATCCTGAGGAGCAGCAGTCCCACCACCA...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGACGGTGGTGCTGGGCTaGTTGCTGCTGGACATGCTG +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRTVVLG*LLLDML
Trigger: CAGCATGTCCAGCAGCAACCAGCCCAGCACCACCGT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGACGGTGGTGCTGGGCTaGTTGCTGCTGGACATGCTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVTVVLG*LLLDML
Trigger: CAGCATGTCCAGCAGCAACCAGCCCAGCACCACCGT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGACGTCACGGTGGTGCTaGGCTGGTTGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVTSRWC*AGCCWT
Trigger: TGTCCAGCAGCAACCAGCCCAGCACCACCGTGACGT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAACACCTGCAGACTGAATaGCAGACTGTTGGGAGACCA +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKHLQTE*QTVGRP
Trigger: TGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTG...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTTGGTGGTGGTGGGACTaGTGCTCCTCAGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPWWWWD*CSSGSA
Trigger: CGCGGATCCTGAGGAGCAGCAGTCCCACCACCACCA...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAATACGTCACGGTGGTaGTGGGCTGGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVNTSRW*WAGCCW
Trigger: CCAGCAGCAACCAGCCCAGCACCACCGTGACGTATT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAAATACGTCACGGTGGTaGTGGGCTGGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRNTSRW*WAGCCW
Trigger: CCAGCAGCAACCAGCCCAGCACCACCGTGACGTATT...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAATGCTGCTGGACATGCTaGTGGAGAATACTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKCCWTC*WRILRS
Trigger: GGACCTCAGTATTCTCCACCAGCATGTCCAGCAGCA...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCATCCTGCTACTGCTGCTaGGTAATACGTCACGGTGGT +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPSCYCC*VIRHGG
Trigger: ACCACCGTGACGTATTACTCAGCAGCAGTAGCAGGA...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCACACTCAGGAACCCACTaGCGATTTTCATACCCCGGA +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPHSGTH*RFSYPG
Trigger: TCCGGGGTATGAAAATCGGCAGTGGGTTCCTGAGTG...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAGCTTTGGCTCCTCAGTaGCATGGTGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELALAPQ*HGGHQS
Trigger: GGACTGATGACCACCATGGCACTGAGGAGCCAAAGC...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGCTTTGGCTCCTCAGTaGCATGGTGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVALAPQ*HGGHQS
Trigger: GGACTGATGACCACCATGGCACTGAGGAGCCAAAGC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGGGCTCCTCAGTGCCATaGTGGTCATCAGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRGSSVP*WSSVLL
Trigger: TAGCAGGACTGATGACCACCATGGCACTGAGGAGCC...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGCTCCTCAGTGCCATaGTGGTCATCAGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGSSVP*WSSVLL
Trigger: TAGCAGGACTGATGACCACCATGGCACTGAGGAGCC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAATGAGGTTTCTGACTTaGGGAGAGGATGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKMRFLT*GEDGTF
Trigger: GAAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCAT...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCCTGCTACTGCTGCTaGGTAATACGTCACGGTGGT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSCYCC*VIRHGG
Trigger: ACCACCGTGACGTATTACTCAGCAGCAGTAGCAGGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCAGCTTCCTCTTGGCTTTaGTTCCCTGAGATTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPASSWL*FPEILA
Trigger: AGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGC...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCACCTGCAGACTGAATaGCAGACTGTTGGGAGACCA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVHLQTE*QTVGRP
Trigger: TGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGCACCTGCAGACTGAATaGCAGACTGTTGGGAGACCA +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRHLQTE*QTVGRP
Trigger: TGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTG...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCTGACACCTGCAGACTaGATGACAGACTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLTPAD*MTDCWE
Trigger: CTCCCAACAGTCTGTCATTCAGTCTGCAGGTGTCAG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCACTGCCCGACTTAAACTaGGAACCAAACGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPLPDLN*EPNACA
Trigger: TGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAG...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCACTCAGGAACCCACTaGCGATTTTCATACCCCGGA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVHSGTH*RFSYPG
Trigger: TCCGGGGTATGAAAATCGGCAGTGGGTTCCTGAGTG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTGCTTTGGCTCCTCAGTaGCATGGTGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVALAPQ*HGGHQS
Trigger: GGACTGATGACCACCATGGCACTGAGGAGCCAAAGC...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGACCGGGGGAAGACGGTaGTTGAACATAACCATACCC +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRTGGRR*LNITIP
Trigger: GGGTATGGTTATGTTCAACCACCGTCTTCCCCCGGT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATGCTGGACATGCTGGTaGAGAATACTGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELCWTCW*RILRSW
Trigger: CCAGGACCTCAGTATTCTCCACCAGCATGTCCAGCA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGCTGGACATGCTGGTaGAGAATACTGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVCWTCW*RILRSW
Trigger: CCAGGACCTCAGTATTCTCCACCAGCATGTCCAGCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGATGCTGCTGGACATGCTaGTGGAGAATACTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRCCWTC*WRILRS
Trigger: GGACCTCAGTATTCTCCACCAGCATGTCCAGCAGCA...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGCTGCTGGACATGCTaGTGGAGAATACTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVCCWTC*WRILRS
Trigger: GGACCTCAGTATTCTCCACCAGCATGTCCAGCAGCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGTCCTCAGTGCCATGGTaGTCATCAGTCCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRSSVPW*SSVLLL
Trigger: CAGTAGCAGGACTGATGACCACCATGGCACTGAGGA...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCCTCAGTGCCATGGTaGTCATCAGTCCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSSVPW*SSVLLL
Trigger: CAGTAGCAGGACTGATGACCACCATGGCACTGAGGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGATTAGTGTCCTGCTTTaGCTCCTCAGTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWISVLL*LLSAMV
Trigger: CACCATGGCACTGAGGAGCCAAAGCAGGACACTAAT...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGACTTGGGGAGAGGATaGCACCTTCTCCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVDLGRG*HLLHLQ
Trigger: TTGGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGAGTGATAAAGGTCATTaGCACCCTGCTGCCCGACTT +
Preference number: 4 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMESDKGH*HPAARL
Trigger: AAGTCGGGCAGCAGGGTGCCAATGACCTTTATCACT...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAGAAGACCTCCAGCCTaGCCACTTTTGGGACCTTAC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVRRPPA*PLLGPY
Trigger: GTAAGGTCCCAAAAGTGGCCAGGCTGGAGGTCTTCT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTAGAAGACCTCCAGCCTaGCCACTTTTGGGACCTTAC +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGRRPPA*PLLGPY
Trigger: GTAAGGTCCCAAAAGTGGCCAGGCTGGAGGTCTTCT...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTTGGCTTTGATTCCCTaGGATTCTGGCTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWLALIP*DSGFGL
Trigger: AAGGCCAAAGCCAGAATCTCAGGGAATCAAAGCCAA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGCTTCCTCTTGGCTTTaGTTCCCTGAGATTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVASSWL*FPEILA
Trigger: AGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAGCTTCCTCTTGGCTTTaGTTCCCTGAGATTCTGGCT +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRASSWL*FPEILA
Trigger: AGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGC...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGTCTTTCTCCTGTATaGATGAGGACATGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGLSPV*MRTCLR
Trigger: GCGGAGACATGTCCTCATTCATACAGGAGAAAGACC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGACTGCCCGACTTAAACTaGGAACCAAACGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRLPDLN*EPNACA
Trigger: TGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAG...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCTGCCCGACTTAAACTaGGAACCAAACGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLPDLN*EPNACA
Trigger: TGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGAAGCCTGCGGTAGGCTaGTTACACAATAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMEKPAVG*LHNKTA
Trigger: TGCAGTCTTATTGTGTAATCAGCCTACCGCAGGCTT...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTACACTCAGGAACCCACTaGCGATTTTCATACCCCGGA +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLHSGTH*RFSYPG
Trigger: TCCGGGGTATGAAAATCGGCAGTGGGTTCCTGAGTG...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGATGCTAACCAAAGACTaGAAGAACCCCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVMLTKD*KNPQEV
Trigger: GACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCAT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTTGACATTAGTGTCCTaGTTTGGCTCCTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWLTLVS*FGSSVP
Trigger: TGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCACCACATGTGCGCCTGTaGTTCAACAATCTATCAGTC +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPPHVRL*FNNLSV
Trigger: GACTGATAGATTGTTGAAGCACAGGCGCACATGTGG...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTCCAGTGCCAATTATaGCTCCACTGGAAGACACGG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFQCQL*LHWKTR
Trigger: CCGTGTCTTCCAGTGGAGGCATAATTGGCACTGGAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTGGCTCCTCAGTGCCATaGTGGTCATCAGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPGSSVP*WSSVLL
Trigger: TAGCAGGACTGATGACCACCATGGCACTGAGGAGCC...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGATTAGTGTCCTGCTTTaGCTCCTCAGTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVISVLL*LLSAMV
Trigger: CACCATGGCACTGAGGAGCCAAAGCAGGACACTAAT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAGATTCCCTGAGATTCTaGCTTTGGCCTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKDSLRF*LWPFCL
Trigger: AAGGCAAAAAGGCCAAAGCCAGAATCTCAGGGAATC...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTATGAGGTTTCTGACTTaGGGAGAGGATGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGMRFLT*GEDGTF
Trigger: GAAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCAT...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGATGAGGTTTCTGACTTaGGGAGAGGATGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVMRFLT*GEDGTF
Trigger: GAAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCAT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAAGGTGTTTGGGTGCCTaGGCTCAAATTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKRCLGA*AQIFFL
Trigger: CAAGAAGAAAATTTGAGCCCAGGCACCCAAACACCT...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAGTGATAAAGGTCATTaGCACCCTGCTGCCCGACTT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSDKGH*HPAARL
Trigger: AAGTCGGGCAGCAGGGTGCCAATGACCTTTATCACT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAAGTGATAAAGGTCATTaGCACCCTGCTGCCCGACTT +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRSDKGH*HPAARL
Trigger: AAGTCGGGCAGCAGGGTGCCAATGACCTTTATCACT...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCAGCCTGGCCACTTTTaGGACCTTACCTGTAACTCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVQPGHF*DLTCNS
Trigger: AGAGTTACAGGTAAGGTCCCAAAAGTGGCCAGGCTG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGCAGCCTGGCCACTTTTaGGACCTTACCTGTAACTCT +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRQPGHF*DLTCNS
Trigger: AGAGTTACAGGTAAGGTCCCAAAAGTGGCCAGGCTG...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTTTGGCTTTGATTCCCTaGGATTCTGGCTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGLALIP*DSGFGL
Trigger: AAGGCCAAAGCCAGAATCTCAGGGAATCAAAGCCAA...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTGGCTTTGATTCCCTaGGATTCTGGCTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLALIP*DSGFGL
Trigger: AAGGCCAAAGCCAGAATCTCAGGGAATCAAAGCCAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAGGTCTTTCTCCTGTATaGATGAGGACATGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLGLSPV*MRTCLR
Trigger: GCGGAGACATGTCCTCATTCATACAGGAGAAAGACC...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGAACTTCATGCTGCACTaGTCACATCCAAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMENFMLH*SHPNGF
Trigger: GAAGCCATTTGGATGTGATCAGTGCAGCATGAAGTT...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAGAACTTGTATTTCCCTaGGACAACACAGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKELVFP*DNTARL
Trigger: TAATCTGGCTGTGTTGTCTCAGGGAAATACAAGTTC...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACACTGACACCTGCAGACTaGATGACAGACTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITLTPAD*MTDCWE
Trigger: CTCCCAACAGTCTGTCATTCAGTCTGCAGGTGTCAG...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTGAAGGTGTCAACTGCTaGTGTGTAGCATCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGEGVNC*CVASKA
Trigger: TGCTTTGGATGCTACACATCAGCAGTTGACACCTTC...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGAAGGTGTCAACTGCTaGTGTGTAGCATCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVEGVNC*CVASKA
Trigger: TGCTTTGGATGCTACACATCAGCAGTTGACACCTTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAGAAGGTGTCAACTGCTaGTGTGTAGCATCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELEGVNC*CVASKA
Trigger: TGCTTTGGATGCTACACATCAGCAGTTGACACCTTC...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATGGCTAGTCAATTTCTaGGATGAGGACTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELWLVNF*DEDWKA
Trigger: AGCCTTCCAGTCCTCATCTCAGAAATTGACTAGCCA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGGCTAGTCAATTTCTaGGATGAGGACTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVWLVNF*DEDWKA
Trigger: AGCCTTCCAGTCCTCATCTCAGAAATTGACTAGCCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTGGCTCTATGTCTTTCTaGGGATCTATCTGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGGSMSF*GSIWLA
Trigger: AGCTAGCCAGATAGATCCTCAGAAAGACATAGAGCC...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGCTCTATGTCTTTCTaGGGATCTATCTGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGSMSF*GSIWLA
Trigger: AGCTAGCCAGATAGATCCTCAGAAAGACATAGAGCC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAGGCTCTATGTCTTTCTaGGGATCTATCTGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRGSMSF*GSIWLA
Trigger: AGCTAGCCAGATAGATCCTCAGAAAGACATAGAGCC...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTCAGCCTTGTTACAGTTaGGATCAAGAGAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGQPCYS*DQERVL
Trigger: AAGCACCCTCTCTTGATCTCAACTGTAACAAGGCTG...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGCAGCCTTGTTACAGTTaGGATCAAGAGAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRQPCYS*DQERVL
Trigger: AAGCACCCTCTCTTGATCTCAACTGTAACAAGGCTG...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAAGCCTGCGGTAGGCTaGTTACACAATAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVKPAVG*LHNKTA
Trigger: TGCAGTCTTATTGTGTAATCAGCCTACCGCAGGCTT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTGACATTAGTGTCCTaGTTTGGCTCCTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLTLVS*FGSSVP
Trigger: TGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATTGACATTAGTGTCCTaGTTTGGCTCCTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELLTLVS*FGSSVP
Trigger: TGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCACATGTGCGCCTGTaGTTCAACAATCTATCAGTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPHVRL*FNNLSV
Trigger: GACTGATAGATTGTTGAAGCACAGGCGCACATGTGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTTCCTCAGTGCCATGGTaGTCATCAGTCCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPSSVPW*SSVLLL
Trigger: CAGTAGCAGGACTGATGACCACCATGGCACTGAGGA...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCACAACCAAAGAAGGTTTaGAAGATGCACTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPQPKKV*KMHLAS
Trigger: GGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTG...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAGACTTGGGGAGAGGATaGCACCTTCTCCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITDLGRG*HLLHLQ
Trigger: TTGGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTC...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGAGGCACTGTTGCTGCTaGCAGTTGGTAAATATCTTC +
Preference number: 4 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMERHCCC*QLVNIF
Trigger: GAAGATATTTACCAACTGCCAGCAGCAACAGTGCCT...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTCTGGAAACAAAGTGTaGTTGTGGAGAGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWSGNKV*LWRGED
Trigger: GTCTTCACCTCTCCACAACCACACTTTGTTTCCAGA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAGAAGTCCTTACTCTATaGTCCACTTCTCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKEVLTL*STSPLE
Trigger: CTCTAATGGAGAAGTGGACCATAGAGTAAGGACTTC...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGTGTAACTCTGGCTGGTaGGTGTCTTTACTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMECNSGW*VSLLLY
Trigger: GTACAAGAGTAAAGACACCCACCAGCCAGAGTTACA...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAACCTGTAACTCTGGCTaGTGGGTGTCTTTACTCTTG +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRTCNSG*WVSLLL
Trigger: CAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGT...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGACCTGTAACTCTGGCTaGTGGGTGTCTTTACTCTTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVTCNSG*WVSLLL
Trigger: CAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAACTGCAAACAACCAGTaGTACTTTTCTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKTANNQ*YFSDVR
Trigger: TCTGACGTCAGAAAAGTACCACTGGTTGTTTGCAGT...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAACTTCATGCTGCACTaGTCACATCCAAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVNFMLH*SHPNGF
Trigger: GAAGCCATTTGGATGTGATCAGTGCAGCATGAAGTT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGGAACTTGTATTTCCCTaGGACAACACAGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWELVFP*DNTARL
Trigger: TAATCTGGCTGTGTTGTCTCAGGGAAATACAAGTTC...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAGGTAGGCATTTCTACTaGGTAACTCTGCATGTTTAT +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKGRHFY*VTLHVY
Trigger: ATAAACATGCAGAGTTACTCAGTAGAAATGCCTACC...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGACTTGCTTTATCATTTaGAGGTGTTTGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVTCFII*RCLGAW
Trigger: CCAGGCACCCAAACACCTTCAAATGATAAAGCAAGT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGACTTGCTTTATCATTTaGAGGTGTTTGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRTCFII*RCLGAW
Trigger: CCAGGCACCCAAACACCTTCAAATGATAAAGCAAGT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAGAGGTGAAGACAAACTaGCAAATTGGAAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELEVKTN*QIGNRV
Trigger: GACACGGTTTCCAATTTGTCAGTTTGTCTTCACCTC...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGAGGTGAAGACAAACTaGCAAATTGGAAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVEVKTN*QIGNRV
Trigger: GACACGGTTTCCAATTTGTCAGTTTGTCTTCACCTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTGTGGTTGTGGAGAGGTaGAGACAAACTGACAAATTG +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGVVVER*RQTDKL
Trigger: CAATTTGTCAGTTTGTCTTCACCTCTCCACAACCAC...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGTGGTTGTGGAGAGGTaGAGACAAACTGACAAATTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVVVVER*RQTDKL
Trigger: CAATTTGTCAGTTTGTCTTCACCTCTCCACAACCAC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGGTGGTTGTGGAGAGGTaGAGACAAACTGACAAATTG +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRVVVER*RQTDKL
Trigger: CAATTTGTCAGTTTGTCTTCACCTCTCCACAACCAC...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAATGCTAACCAAAGACTaGAAGAACCCCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITMLTKD*KNPQEV
Trigger: GACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCAT...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGTTCCAGTGCCAATTATaGCTCCACTGGAAGACACGG +
Preference number: 4 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRFQCQL*LHWKTR
Trigger: CCGTGTCTTCCAGTGGAGGCATAATTGGCACTGGAA...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACATTCCAGTGCCAATTATaGCTCCACTGGAAGACACGG +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITFQCQL*LHWKTR
Trigger: CCGTGTCTTCCAGTGGAGGCATAATTGGCACTGGAA...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGTTCATCTATTCCAGTaGCAATTATGCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVVHLFQ*QLCLHW
Trigger: CCAGTGGAGGCATAATTGGCACTGGAATAGATGAAC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGGTTCATCTATTCCAGTaGCAATTATGCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRVHLFQ*QLCLHW
Trigger: CCAGTGGAGGCATAATTGGCACTGGAATAGATGAAC...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTTGGCACCCTCTTCTaGAGTTCATCTATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFGTLF*SSSIPV
Trigger: CACTGGAATAGATGAACTGCAGAAGAGGGTGCCAAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTTTTGGCACCCTCTTCTaGAGTTCATCTATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGFGTLF*SSSIPV
Trigger: CACTGGAATAGATGAACTGCAGAAGAGGGTGCCAAA...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCATTGAAGGTGTTTGGGTaGCTGGGCTCAAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPLKVFG*LGSNFL
Trigger: AAGAAAATTTGAGCCCAGGCACCCAAACACCTTCAA...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTTATACATGGAAGCCTaGGGTAGGCTGATTACACAA +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWLYMEA*GRLITQ
Trigger: TTGTGTAATCAGCCTACCGCAGGCTTCCATGTATAA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAAACATAACCATACCCTaGGGAAAGGTGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLNITIP*GKVGSI
Trigger: GATGGAACCCACCTTTCCCCAGGGTATGGTTATGTT...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTAACATAACCATACCCTaGGGAAAGGTGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVNITIP*GKVGSI
Trigger: GATGGAACCCACCTTTCCCCAGGGTATGGTTATGTT...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGATTAGTGTCCTGCTTTaGCTCCTCAGTGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRISVLL*LLSAMV
Trigger: CACCATGGCACTGAGGAGCCAAAGCAGGACACTAAT...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGATTCCCTGAGATTCTaGCTTTGGCCTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVDSLRF*LWPFCL
Trigger: AAGGCAAAAAGGCCAAAGCCAGAATCTCAGGGAATC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAGATTCCCTGAGATTCTaGCTTTGGCCTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELDSLRF*LWPFCL
Trigger: AAGGCAAAAAGGCCAAAGCCAGAATCTCAGGGAATC...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCAACCAAAGAAGGTTTaGAAGATGCACTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVQPKKV*KMHLAS
Trigger: GGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTCAACCAAAGAAGGTTTaGAAGATGCACTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGQPKKV*KMHLAS
Trigger: GGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTG...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAATTACCCATATTGGTATaGTTTGATGACCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKLPILV*FDDPGS
Trigger: AGAACCTGGGTCATCAAACCATACCAATATGGGTAA...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGCCAGATTACCCATATTaGTATGGTTTGATGACCCAG +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWPDYPY*YGLMTQ
Trigger: CTGGGTCATCAAACCATACCAATATGGGTAATCTGG...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAGGCACTGTTGCTGCTaGCAGTTGGTAAATATCTTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVRHCCC*QLVNIF
Trigger: GAAGATATTTACCAACTGCCAGCAGCAACAGTGCCT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAGGTGTTTGGGTGCCTaGGCTCAAATTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVRCLGA*AQIFFL
Trigger: CAAGAAGAAAATTTGAGCCCAGGCACCCAAACACCT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTCATTTGAAGGTGTTTaGGTGCCTGGGCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWSFEGV*VPGLKF
Trigger: AAATTTGAGCCCAGGCACCCAAACACCTTCAAATGA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAACCTGTTGGAGGTATTTaGAGTATTCTTGCAACATAC +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKPVGGI*SILATY
Trigger: GTATGTTGCAAGAATACTCCAAATACCTCCAACAGG...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATCTGGAAACAAAGTGTaGTTGTGGAGAGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELSGNKV*LWRGED
Trigger: GTCTTCACCTCTCCACAACCACACTTTGTTTCCAGA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCTGGAAACAAAGTGTaGTTGTGGAGAGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSGNKV*LWRGED
Trigger: GTCTTCACCTCTCCACAACCACACTTTGTTTCCAGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGACTGAGGTAACAGATTaGCCGAAACCACACTCCAAA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVTEVTD*PKPHSK
Trigger: TTTGGAGTGTGGTTTCGGCCAATCTGTTACCTCAGT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAACTGAGGTAACAGATTaGCCGAAACCACACTCCAAA +
Preference number: 4 (lower is better)
Translates to: MSVESLDGITALLQLRSRTEVTD*PKPHSK
Trigger: TTTGGAGTGTGGTTTCGGCCAATCTGTTACCTCAGT...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGTAACTCTGGCTGGTaGGTGTCTTTACTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVCNSGW*VSLLLY
Trigger: GTACAAGAGTAAAGACACCCACCAGCCAGAGTTACA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGAACTTGTATTTCCCTaGGACAACACAGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVELVFP*DNTARL
Trigger: TAATCTGGCTGTGTTGTCTCAGGGAAATACAAGTTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAGAGGTGAAGACAAACTaGCAAATTGGAAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLEVKTN*QIGNRV
Trigger: GACACGGTTTCCAATTTGTCAGTTTGTCTTCACCTC...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTGCAAAGTTCTCAATCTaGTACGTTGTTCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGAKFSI*YVVLGS
Trigger: AGAGCCTAGAACAACGTATCAGATTGAGAACTTTGC...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGCAAAGTTCTCAATCTaGTACGTTGTTCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVAKFSI*YVVLGS
Trigger: AGAGCCTAGAACAACGTATCAGATTGAGAACTTTGC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGGCAAAGTTCTCAATCTaGTACGTTGTTCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRAKFSI*YVVLGS
Trigger: AGAGCCTAGAACAACGTATCAGATTGAGAACTTTGC...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTAAAAGGCACTGTTGCTaGTGGCAGTTGGTAAATATC +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGKRHCC*WQLVNI
Trigger: GATATTTACCAACTGCCAGCAGCAACAGTGCCTTTT...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAAAAGGCACTGTTGCTaGTGGCAGTTGGTAAATATC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVKRHCC*WQLVNI
Trigger: GATATTTACCAACTGCCAGCAGCAACAGTGCCTTTT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAAAAAGGCACTGTTGCTaGTGGCAGTTGGTAAATATC +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELKRHCC*WQLVNI
Trigger: GATATTTACCAACTGCCAGCAGCAACAGTGCCTTTT...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTATCCACTCGTGGTTCTaGAATATTGAAAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGIHSWF*NIERIL
Trigger: GAGGATCCTTTCAATATTGCAGAACCACGAGTGGAT...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGATCCACTCGTGGTTCTaGAATATTGAAAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVIHSWF*NIERIL
Trigger: GAGGATCCTTTCAATATTGCAGAACCACGAGTGGAT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTGAAGGTGTTTGGGTaGCTGGGCTCAAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLKVFG*LGSNFL
Trigger: AAGAAAATTTGAGCCCAGGCACCCAAACACCTTCAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTTTGAAGGTGTTTGGGTaGCTGGGCTCAAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGLKVFG*LGSNFL
Trigger: AAGAAAATTTGAGCCCAGGCACCCAAACACCTTCAA...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTTGGAAGATGCACTTaGCTTCCTCTTGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFGRCT*LPLGFD
Trigger: ATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCAGATTACCCATATTaGTATGGTTTGATGACCCAG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPDYPY*YGLMTQ
Trigger: CTGGGTCATCAAACCATACCAATATGGGTAATCTGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTAGGTGTTTGGGTGCCTaGGCTCAAATTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVRCLGA*AQIFFL
Trigger: CAAGAAGAAAATTTGAGCCCAGGCACCCAAACACCT...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCATTTGAAGGTGTTTaGGTGCCTGGGCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSFEGV*VPGLKF
Trigger: AAATTTGAGCCCAGGCACCCAAACACCTTCAAATGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAACAAAGTGTGGTTGTaGAGAGGTGAAGACAAACTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVNKVWL*RGEDKL
Trigger: CAGTTTGTCTTCACCTCTCCACAACCACACTTTGTT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGAAGTCCTTACTCTATaGTCCACTTCTCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVEVLTL*STSPLE
Trigger: CTCTAATGGAGAAGTGGACCATAGAGTAAGGACTTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAATACTCTTGTACTACATaGCTCACTTACATCAGACAT +
Preference number: 4 (lower is better)
Translates to: REKEGPRTLKERLRTRTKYSCTT*LTYIRH
Trigger: ATGTCTGATGTAAGTGAGCCATGTAGTACAAGAGTA...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGACCTGTAACTCTGGCTaGTGGGTGTCTTTACTCTTG +
Preference number: 4 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRTCNSG*WVSLLL
Trigger: CAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGT...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCATGTAGTAGGTATTTCTaGATGAAACCCATACTACAC +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPCSRYF*MKPILH
Trigger: GTGTAGTATGGGTTTCATTCAGAAATACCTACTACA...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTGTAGTAGGTATTTCTaGATGAAACCCATACTACAC +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWCSRYF*MKPILH
Trigger: GTGTAGTATGGGTTTCATTCAGAAATACCTACTACA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCCATATGGTACTTCTaGATAAACTTCATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSIWYF*INFMLH
Trigger: GTGCAGCATGAAGTTTATTCAGAAGTACCATATGGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGTAGGCATTTCTACTaGGTAACTCTGCATGTTTAT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGRHFY*VTLHVY
Trigger: ATAAACATGCAGAGTTACTCAGTAGAAATGCCTACC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGATTTGGGCTATTCCCTaGCGATCTATACATGTAAAT +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWIWAIP*RSIHVN
Trigger: ATTTACATGTATAGATCGTCAGGGAATAGCCCAAAT...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTGTCAGTAGAATCGCTTaGTGGAATTACAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVVSRIA*WNYSLV
Trigger: AACAAGGCTGTAATTCCATCAAGCGATTCTACTGAC...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAGTCAGTAGAATCGCTTaGTGGAATTACAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLVSRIA*WNYSLV
Trigger: AACAAGGCTGTAATTCCATCAAGCGATTCTACTGAC...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTGTCCTCTCCATCCTTTaGTTACAGCTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPVLSIL*LQLVLC
Trigger: ACAGAGTACAAGCTGTAATCAAAGGATGGAGAGGAC...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAGTCCTCTCCATCCTTTaGTTACAGCTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITVLSIL*LQLVLC
Trigger: ACAGAGTACAAGCTGTAATCAAAGGATGGAGAGGAC...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGGCTTTGGCCTTTTTaGCTTTTTGACATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVWLWPF*LFDISV
Trigger: GACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTTGGCTTTGGCCTTTTTaGCTTTTTGACATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGWLWPF*LFDISV
Trigger: GACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCA...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGTTCATCTATTCCAGTaGCAATTATGCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRVHLFQ*QLCLHW
Trigger: CCAGTGGAGGCATAATTGGCACTGGAATAGATGAAC...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTTTTGGCACCCTCTTCTaGAGTTCATCTATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPFGTLF*SSSIPV
Trigger: CACTGGAATAGATGAACTGCAGAAGAGGGTGCCAAA...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTATTTGGAAGATGCACTTaGCTTCCTCTTGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLFGRCT*LPLGFD
Trigger: ATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAA...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTACCCATATTGGTATaGTTTGATGACCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLPILV*FDDPGS
Trigger: AGAACCTGGGTCATCAAACCATACCAATATGGGTAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTCCAGATTACCCATATTaGTATGGTTTGATGACCCAG +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVPDYPY*YGLMTQ
Trigger: CTGGGTCATCAAACCATACCAATATGGGTAATCTGG...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCTGTTGGAGGTATTTaGAGTATTCTTGCAACATAC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPVGGI*SILATY
Trigger: GTATGTTGCAAGAATACTCCAAATACCTCCAACAGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGACAAACTGACAAATTaGAAACCGTGTCCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVDKLTN*KPCPRV
Trigger: TACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAAACAAAGTGTGGTTGTaGAGAGGTGAAGACAAACTG +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLNKVWL*RGEDKL
Trigger: CAGTTTGTCTTCACCTCTCCACAACCACACTTTGTT...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCAAGACAAATAAAGACCTaGCTGAGATCCAAACAACAT +
Preference number: 4 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPRQIKT*LRSKQH
Trigger: ATGTTGTTTGGATCTCAGCCAGGTCTTTATTTGTCT...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTACTCTTGTACTACATaGCTCACTTACATCAGACAT +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWYSCTT*LTYIRH
Trigger: ATGTCTGATGTAAGTGAGCCATGTAGTACAAGAGTA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTTGTAACTCTGGCTGGTaGGTGTCTTTACTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPCNSGW*VSLLLY
Trigger: GTACAAGAGTAAAGACACCCACCAGCCAGAGTTACA...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGACAATCTCAGAATTTTaGATCAGCCCAGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRTISEF*ISPDGD
Trigger: ATCTCCATCTGGGCTGATCCAAAATTCTGAGATTGT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
3UTR CAA 72 bp CTTAAGAGATACAGTGGTAAAGGTCCTCTCCATCCTTaGATTACAGCTTGTACTCTGTACTCAATAGAACTT +
Preference number: 4 (lower is better)
Translates to: LKRYSGKGPLHP*ITACTLYSIEL
Trigger: AAGTTCTATTGAGTACAGAGTACAAGCTGTAATCAAAGGATGGAGAGGACCTTTACCACTGTATCTCTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGTAGTAGGTATTTCTaGATGAAACCCATACTACAC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVCSRYF*MKPILH
Trigger: GTGTAGTATGGGTTTCATTCAGAAATACCTACTACA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTTCCATATGGTACTTCTaGATAAACTTCATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVSIWYF*INFMLH
Trigger: GTGCAGCATGAAGTTTATTCAGAAGTACCATATGGA...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCAATCTATCAGTCCTTaGAAAATACTGTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVQSISP*KILLAS
Trigger: ACTTGCCAACAGTATTTTTCAAGGACTGATAGATTG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGATTTGGGCTATTCCCTaGCGATCTATACATGTAAAT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVIWAIP*RSIHVN
Trigger: ATTTACATGTATAGATCGTCAGGGAATAGCCCAAAT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR TCA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTACTAAGAATCTTGCAATaGCAAGTTGGTGACCCTTTA +
Preference number: 4 (lower is better)
Translates to: QNRCRPCIINNACPKFQLLRILQ*QVGDPL
Trigger: TAAAGGGTCACCAACTTGTCATTGCAAGATTCTTAG...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTTTATCTGACCTTGTTTaGCACTTGTACTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGLSDLV*HLYFGE
Trigger: TTCTCCAAAGTACAAGTGGCAAACAAGGTCAGATAA...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTATCTGACCTTGTTTaGCACTTGTACTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLSDLV*HLYFGE
Trigger: TTCTCCAAAGTACAAGTGGCAAACAAGGTCAGATAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATTATCTGACCTTGTTTaGCACTTGTACTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: YKQTHSYPSQELCHQLELLSDLV*HLYFGE
Trigger: TTCTCCAAAGTACAAGTGGCAAACAAGGTCAGATAA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTAGAACCAAACGCTTGTaGAAAGTTCTCAATCTGATA +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGRTKRL*KVLNLI
Trigger: TATCAGATTGAGAACTTTGCACAAGCGTTTGGTTCT...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAGAACCAAACGCTTGTaGAAAGTTCTCAATCTGATA +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVRTKRL*KVLNLI
Trigger: TATCAGATTGAGAACTTTGCACAAGCGTTTGGTTCT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGTTATACATGGAAGCCTaGGGTAGGCTGATTACACAA +
Preference number: 4 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRLYMEA*GRLITQ
Trigger: TTGTGTAATCAGCCTACCGCAGGCTTCCATGTATAA...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTTTTGGAAGATGCACTTaGCTTCCTCTTGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPFGRCT*LPLGFD
Trigger: ATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAA...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTTTTGGAGAAGACCAATaGTCTCCACACTATTATTTG +
Preference number: 4 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGFGEDQ*SPHYYL
Trigger: CAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAA...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTTGGAGAAGACCAATaGTCTCCACACTATTATTTG +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFGEDQ*SPHYYL
Trigger: CAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGTTTGGAGAAGACCAATaGTCTCCACACTATTATTTG +
Preference number: 4 (lower is better)
Translates to: QRGSDVITISRHILIPHRFGEDQ*SPHYYL
Trigger: CAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAA...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGGGCTTTCTGATTTGTTaGAGTATTGATCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWGFLIC*SIDPKY
Trigger: GTATTTTGGATCAATACTCCAACAAATCAGAAAGCC...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGGGCTTTCTGATTTGTTaGAGTATTGATCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMEGFLIC*SIDPKY
Trigger: GTATTTTGGATCAATACTCCAACAAATCAGAAAGCC...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTCCTGTTGGAGGTATTTaGAGTATTCTTGCAACATAC +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVPVGGI*SILATY
Trigger: GTATGTTGCAAGAATACTCCAAATACCTCCAACAGG...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTTTTCAAAAGCCTGTTaGAGGTATTTGGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWFSKAC*RYLEYS
Trigger: AGAATACTCCAAATACCTCCAACAGGCTTTTGAAAA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTGACAAACTGACAAATTaGAAACCGTGTCCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVDKLTN*KPCPRV
Trigger: TACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTC...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAAACAAAGTGTGGTTGTaGAGAGGTGAAGACAAACTG +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITNKVWL*RGEDKL
Trigger: CAGTTTGTCTTCACCTCTCCACAACCACACTTTGTT...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAGACAAATAAAGACCTaGCTGAGATCCAAACAACAT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVRQIKT*LRSKQH
Trigger: ATGTTGTTTGGATCTCAGCCAGGTCTTTATTTGTCT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGAAGTCCTTACTCTATaGTCCACTTCTCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: SYVTSWNYNLINIYPRTREVLTL*STSPLE
Trigger: CTCTAATGGAGAAGTGGACCATAGAGTAAGGACTTC...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTACTCTTGTACTACATaGCTCACTTACATCAGACAT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVYSCTT*LTYIRH
Trigger: ATGTCTGATGTAAGTGAGCCATGTAGTACAAGAGTA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTACTGCAAACAACCAGTaGTACTTTTCTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPTANNQ*YFSDVR
Trigger: TCTGACGTCAGAAAAGTACCACTGGTTGTTTGCAGT...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACATCCATATGGTACTTCTaGATAAACTTCATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITSIWYF*INFMLH
Trigger: GTGCAGCATGAAGTTTATTCAGAAGTACCATATGGA...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTCAATCTATCAGTCCTTaGAAAATACTGTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVQSISP*KILLAS
Trigger: ACTTGCCAACAGTATTTTTCAAGGACTGATAGATTG...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAGGTAGGCATTTCTACTaGGTAACTCTGCATGTTTAT +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITGRHFY*VTLHVY
Trigger: ATAAACATGCAGAGTTACTCAGTAGAAATGCCTACC...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTCTAAGAATCTTGCAATaGCAAGTTGGTGACCCTTTA +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPLRILQ*QVGDPL
Trigger: TAAAGGGTCACCAACTTGTCATTGCAAGATTCTTAG...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTTGGCTTTGGCCTTTTTaGCTTTTTGACATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPWLWPF*LFDISV
Trigger: GACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCA...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTATTATTTGATACTATaGCAAGTGAGCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVYYLIL*QVSHLV
Trigger: AACCAAGTGGCTCACTTGGCATAGTATCAAATAATA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR GCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTAGAACCAAACGCTTGTaGAAAGTTCTCAATCTGATA +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVRTKRL*KVLNLI
Trigger: TATCAGATTGAGAACTTTGCACAAGCGTTTGGTTCT...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGCTTTCTGATTTGTTaGAGTATTGATCCAAAATAC +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGFLIC*SIDPKY
Trigger: GTATTTTGGATCAATACTCCAACAAATCAGAAAGCC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTTTCAAAAGCCTGTTaGAGGTATTTGGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFSKAC*RYLEYS
Trigger: AGAATACTCCAAATACCTCCAACAGGCTTTTGAAAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAGACAAACTGACAAATTaGAAACCGTGTCCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITDKLTN*KPCPRV
Trigger: TACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTC...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTAGACAAATAAAGACCTaGCTGAGATCCAAACAACAT +
Preference number: 4 (lower is better)
Translates to: MSPVGITTLLISIQEHGVRQIKT*LRSKQH
Trigger: ATGTTGTTTGGATCTCAGCCAGGTCTTTATTTGTCT...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR TCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACACAATCTATCAGTCCTTaGAAAATACTGTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITQSISP*KILLAS
Trigger: ACTTGCCAACAGTATTTTTCAAGGACTGATAGATTG...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR GCA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACATATTATTTGATACTATaGCAAGTGAGCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: CTILITLLYMEACGRLITYYLIL*QVSHLV
Trigger: AACCAAGTGGCTCACTTGGCATAGTATCAAATAATA...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGTTTTCAAAAGCCTGTTaGAGGTATTTGGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRFSKAC*RYLEYS
Trigger: AGAATACTCCAAATACCTCCAACAGGCTTTTGAAAA...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CCA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTGGAATGAATGTGGTTTaGAAGTTCAGAGTACATTTA +
Preference number: 4 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPGMNVV*KFRVHL
Trigger: TAAATGTACTCTGAACTTCCAAACCACATTCATTCC...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS GCA 90 bp CCGGGGCCTGGGGAAAGGTGGGTTCCATCTCTGCCCTCCTGCCGCTaGTGCCGCCGCCGCCGCCGCCGCCACTACCACCGCCGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: PGPGERWVPSLPSCR*CRRRRRRHYHRRRS
Trigger: GCTCCGGCGGCGGTGGTAGTGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCAGGAGGGCAGAGATGGAACCCACCTTTCCCCAGGCCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367352.3
CDS GCA 90 bp TACCACCGCTACTGCCGGTACCTCCGCCGCCACTCAGGAACCCACTaGCGATTTTCATACCCCGGAGGAGGCGGGTCCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: YHRYCRYLRRHSGTH*RFSYPGGGGSRRRR
Trigger: GCGGCGGCGGCGGGACCCGCCTCCTCCGGGGTATGAAAATCGGCAGTGGGTTCCTGAGTGGCGGCGGAGGTACCGGCAGTAGCGGTGGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294740.3
CDS GCA 90 bp CGCCGCCGCCACTACCACCGCCGCCGGAGCCGCTACCACCGCTACTaGCGGTACCTCCGCCGCCACTCAGGAACCCACTGCCGATTTTCA +
Preference number: 5 (lower is better)
Translates to: RRRHYHRRRSRYHRY*RYLRRHSGTHCRFS
Trigger: TGAAAATCGGCAGTGGGTTCCTGAGTGGCGGCGGAGGTACCGGCAGTAGCGGTGGTAGCGGCTCCGGCGGCGGTGGTAGTGGCGGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp AAGCTGGTGACCGGGGGAAGACGGTGGTTGAACATAACCATACCCTaGGGAAAGGTGGGTTCCATCTCTGCCCTCCTGCCGCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: KLVTGGRRWLNITIP*GKVGSISALLPLLP
Trigger: CGGCAGCAGCGGCAGGAGGGCAGAGATGGAACCCACCTTTCCCCAGGGTATGGTTATGTTCAACCACCGTCTTCCCCCGGTCACCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS GCA 90 bp TGTTTGATGCTAACCAAAGACTGCAAGAACCCCCAGGAGGTCCTCTaGGAGGGGAAGGCCGCGGCTGACGCCGCCGGCTCCTTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: CLMLTKDCKNPQEVL*EGKAAADAAGSFLK
Trigger: TTTCAAGAAGGAGCCGGCGGCGTCAGCCGCGGCCTTCCCCTCGCAGAGGACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCATCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 90 bp TCCTCAGGATCCGCGGGTTTCTCCTGTTTGATGCTAACCAAAGACTaGAAGAACCCCCAGGAGGTCCTCTGCGAGGGGAAGGCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: SSGSAGFSCLMLTKD*KNPQEVLCEGKAAA
Trigger: AGCCGCGGCCTTCCCCTCGCAGAGGACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCATCAAACAGGAGAAACCCGCGGATCCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS TCA 90 bp TTGGCTCCTCAGTGCCATGGTGGTCATCAGTCCTGCTACTGCTGCTaGGTAATACGTCACGGTGGTGCTGGGCTGGTTGCTGCTGGACAT +
Preference number: 5 (lower is better)
Translates to: LAPQCHGGHQSCYCC*VIRHGGAGLVAAGH
Trigger: ATGTCCAGCAGCAACCAGCCCAGCACCACCGTGACGTATTACTCAGCAGCAGTAGCAGGACTGATGACCACCATGGCACTGAGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp GCCTTTTTGACATTAGTGTCCTGCTTTGGCTCCTCAGTGCCATGGTaGTCATCAGTCCTGCTACTGCTGCTGAGTAATACGTCACGGTGG +
Preference number: 5 (lower is better)
Translates to: AFLTLVSCFGSSVPW*SSVLLLLLSNTSRW
Trigger: CCACCGTGACGTATTACTCAGCAGCAGTAGCAGGACTGATGACCACCATGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp TTTGCCTTTTTGACATTAGTGTCCTGCTTTGGCTCCTCAGTGCCATaGTGGTCATCAGTCCTGCTACTGCTGCTGAGTAATACGTCACGG +
Preference number: 5 (lower is better)
Translates to: FAFLTLVSCFGSSVP*WSSVLLLLLSNTSR
Trigger: CCGTGACGTATTACTCAGCAGCAGTAGCAGGACTGATGACCACCATGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAAAAAGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp TTCTGGCTTTGGCCTTTTTGCCTTTTTGACATTAGTGTCCTGCTTTaGCTCCTCAGTGCCATGGTGGTCATCAGTCCTGCTACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: FWLWPFCLFDISVLL*LLSAMVVISPATAA
Trigger: AGCAGCAGTAGCAGGACTGATGACCACCATGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCAGCCGCCGGCTCCTTCTaGAAAGTCATGTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPAAGSF*KVMSGA
Trigger: AGCCCCGGACATGACTTTCAAGAAGGAGCCGGCGGC...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGGTGGTGCTGGGCTGGTaGCTGCTGGACATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMEVVLGW*LLDMLV
Trigger: CACCAGCATGTCCAGCAGCAACCAGCCCAGCACCAC...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS GCA 90 bp GAGGATGGCACCTTCTCCATCTCCAACCAAAGAAGGTTTGGAAGATaGACTTGGCTTCCTCTTGGCTTTGATTCCCTGAGATTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: EDGTFSISNQRRFGR*TWLPLGFDSLRFWL
Trigger: AAGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTGGAGATGGAGAAGGTGCCATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGCCGCCGGCTCCTTCTaGAAAGTCATGTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVAAGSF*KVMSGA
Trigger: AGCCCCGGACATGACTTTCAAGAAGGAGCCGGCGGC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTGCCGCCGGCTCCTTCTaGAAAGTCATGTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGAAGSF*KVMSGA
Trigger: AGCCCCGGACATGACTTTCAAGAAGGAGCCGGCGGC...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGTGGTGCTGGGCTGGTaGCTGCTGGACATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVVVLGW*LLDMLV
Trigger: CACCAGCATGTCCAGCAGCAACCAGCCCAGCACCAC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp CACTACAGTGATCACAGATATGAGGTTTCTGACTTGGGGAGAGGATaGCACCTTCTCCATCTCCAACCAAAGAAGGTTTGGAAGATGCAC +
Preference number: 5 (lower is better)
Translates to: HYSDHRYEVSDLGRG*HLLHLQPKKVWKMH
Trigger: GTGCATCTTCCAAACCTTCTTTGGTTGGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCATATCTGTGATCACTGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp GGAAGATGCACTTGGCTTCCTCTTGGCTTTGATTCCCTGAGATTCTaGCTTTGGCCTTTTTGCCTTTTTGACATTAGTGTCCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: GRCTWLPLGFDSLRF*LWPFCLFDISVLLW
Trigger: CCAAAGCAGGACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp TACTCTATGGTCCACTTCTCCATTAGAGTTAGTGATAAAGGTCATTaGCACCCTGCTGCCCGACTTAAACTGAGAACCAAACGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: YSMVHFSIRVSDKGH*HPAARLKLRTKRLC
Trigger: GCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAGCAGGGTGCCAATGACCTTTATCACTAACTCTAATGGAGAAGTGGACCATAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTGTGGTGCTGGGCTGGTaGCTGCTGGACATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPVVLGW*LLDMLV
Trigger: CACCAGCATGTCCAGCAGCAACCAGCCCAGCACCAC...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS TCA 90 bp AGTGACAATGGTGCCTCATTGTCCAAAACACTGACACCTGCAGACTaGATGACAGACTGTTGGGAGACCATGTGTCCTACGTTTATAGAA +
Preference number: 5 (lower is better)
Translates to: SDNGASLSKTLTPAD*MTDCWETMCPTFIE
Trigger: TTCTATAAACGTAGGACACATGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTGTCAGTGTTTTGGACAATGAGGCACCATTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 90 bp CATTGGCACCCTGCTGCCCGACTTAAACTGAGAACCAAACGCTTGTaGAAAGTTCTCAATCTGATACGTTGTTCTAGGCTCTATGTCTTT +
Preference number: 5 (lower is better)
Translates to: HWHPAARLKLRTKRL*KVLNLIRCSRLYVF
Trigger: AAAGACATAGAGCCTAGAACAACGTATCAGATTGAGAACTTTGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAGCAGGGTGCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGGGGAAGACGGTGGTaGAACATAACCATACCCTGG +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGGRRW*NITIPW
Trigger: CCAGGGTATGGTTATGTTCAACCACCGTCTTCCCCC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAATATGAGGTTTCTGACTaGGGGAGAGGATGGCACCTT +
Preference number: 5 (lower is better)
Translates to: REKEGPRTLKERLRTRTKYEVSD*GRGWHL
Trigger: AAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCATA...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGGCGGGTTTCTCCTGTTaGATGCTAACCAAAGACTGC +
Preference number: 5 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWAGFSC*MLTKDC
Trigger: GCAGTCTTTGGTTAGCATCAAACAGGAGAAACCCGC...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTATGAGGTTTCTGACTaGGGGAGAGGATGGCACCTT +
Preference number: 5 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWYEVSD*GRGWHL
Trigger: AAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCATA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTGGGGGAAGACGGTGGTaGAACATAACCATACCCTGG +
Preference number: 5 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPGGRRW*NITIPW
Trigger: CCAGGGTATGGTTATGTTCAACCACCGTCTTCCCCC...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGCGGGTTTCTCCTGTTaGATGCTAACCAAAGACTGC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVAGFSC*MLTKDC
Trigger: GCAGTCTTTGGTTAGCATCAAACAGGAGAAACCCGC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGCCAACCAAAGAAGGTTaGGAAGATGCACTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWPTKEG*EDALGF
Trigger: GAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTGG...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTATGAGGTTTCTGACTaGGGGAGAGGATGGCACCTT +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVYEVSD*GRGWHL
Trigger: AAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCATA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGCCACTATGTGTCCTCTaGTGTCTCTCCATATGGTAC +
Preference number: 5 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWPLCVL*CLSIWY
Trigger: GTACCATATGGAGAGACACAAGAGGACACATAGTGG...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCACCATATTGGTATGGTTaGATGACCCAGGTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPPYWYG*MTQVLH
Trigger: GTGCAGAACCTGGGTCATCAAACCATACCAATATGG...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGTGCCAAGTGAGCCACTaGGTTTTCCAGACAAGGATT +
Preference number: 5 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMECQVSH*VFQTRI
Trigger: AATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCA...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCTGAATGACAGACTGTaGGGAGACCATGTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLNDRL*GDHVSY
Trigger: GTAGGACACATGGTCTCCCAACAGTCTGTCATTCAG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGACAGCCTTGTTACAGTaGAGATCAAGAGAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMETALLQ*RSREGA
Trigger: AGCACCCTCTCTTGATCTCAACTGTAACAAGGCTGT...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGAACCAGCCAACCACTaGGGCTTCAACACTGTACTA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVEPANH*GFNTVL
Trigger: TAGTACAGTGTTGAAGCCCAAGTGGTTGGCTGGTTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS GCA 90 bp TTCTTTCTGCTTCCTTTCTTAAAGATCAATTTTGGCACCCTCTTCTaGAGTTCATCTATTCCAGTGCCAATTATGCCTCCACTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: FFLLPFLKINFGTLF*SSSIPVPIMPPLED
Trigger: GTCTTCCAGTGGAGGCATAATTGGCACTGGAATAGATGAACTGCAGAAGAGGGTGCCAAAATTGATCTTTAAGAAAGGAAGCAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCAACCAAAGAAGGTTaGGAAGATGCACTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPTKEG*EDALGF
Trigger: GAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCACTATGTGTCCTCTaGTGTCTCTCCATATGGTAC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPLCVL*CLSIWY
Trigger: GTACCATATGGAGAGACACAAGAGGACACATAGTGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCCATATTGGTATGGTTaGATGACCCAGGTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVPYWYG*MTQVLH
Trigger: GTGCAGAACCTGGGTCATCAAACCATACCAATATGG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGCCAAGTGAGCCACTaGGTTTTCCAGACAAGGATT +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVCQVSH*VFQTRI
Trigger: AATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTTTGCCACTTGTACTTaGGAGAAGACCAATGGTCTC +
Preference number: 5 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWFATCT*EKTNGL
Trigger: GAGACCATTGGTCTTCTCCAAAGTACAAGTGGCAAA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGGACAATGGTGCCTCATaGTCCAAAACACTGACACCT +
Preference number: 5 (lower is better)
Translates to: QRGSDVITISRHILIPHRDNGAS*SKTLTP
Trigger: AGGTGTCAGTGTTTTGGACAATGAGGCACCATTGTC...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGACAATGGTGCCTCATaGTCCAAAACACTGACACCT +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVDNGAS*SKTLTP
Trigger: AGGTGTCAGTGTTTTGGACAATGAGGCACCATTGTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAAGACAAACTGACAAATaGGAAACCGTGTCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: REKEGPRTLKERLRTRTKRQTDK*ETVSKS
Trigger: ACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTCT...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGCTGAGAACCAAACGCTaGTGCAAAGTTCTCAATCTG +
Preference number: 5 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMELRTKR*CKVLNL
Trigger: CAGATTGAGAACTTTGCACAAGCGTTTGGTTCTCAG...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTAGGTCCTCTCCATCCTTaGATTACAGCTTGTACTCTG +
Preference number: 5 (lower is better)
Translates to: YKQTHSYPSQELCHQLELGPLHP*ITACTL
Trigger: CAGAGTACAAGCTGTAATCAAAGGATGGAGAGGACC...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS TCA 90 bp AGTGTTCTCCTGAGGTGTGTAAATCCACTCGTGGTTCTGCAATATTaGAAGGATCCTCTTTCTGGCTTTCTGATTTGTTGGAGTATTGAT +
Preference number: 5 (lower is better)
Translates to: SVLLRCVNPLVVLQY*KDPLSGFLICWSID
Trigger: ATCAATACTCCAACAAATCAGAAAGCCAGAAAGAGGATCCTTTCAATATTGCAGAACCACGAGTGGATTTACACACCTCAGGAGAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 90 bp TACTTTGGAGAAGACCAATGGTCTCCACACTATTATTTGATACTATaGCAAGTGAGCCACTTGGTTTTCCAGACAAGGATTTCTGTCCTA +
Preference number: 5 (lower is better)
Translates to: YFGEDQWSPHYYLIL*QVSHLVFQTRISVL
Trigger: TAGGACAGAAATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCATAGTATCAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp TACTTATCTGACCTTGTTTGCCACTTGTACTTTGGAGAAGACCAATaGTCTCCACACTATTATTTGATACTATGCCAAGTGAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: YLSDLVCHLYFGEDQ*SPHYYLILCQVSHL
Trigger: CAAGTGGCTCACTTGGCATAGTATCAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAAGTACAAGTGGCAAACAAGGTCAGATAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTCCACTATGTGTCCTCTaGTGTCTCTCCATATGGTAC +
Preference number: 5 (lower is better)
Translates to: MSPVGITTLLISIQEHGVPLCVL*CLSIWY
Trigger: GTACCATATGGAGAGACACAAGAGGACACATAGTGG...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTACCATATTGGTATGGTTaGATGACCCAGGTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: QNRCRPCIINNACPKFQLPYWYG*MTQVLH
Trigger: GTGCAGAACCTGGGTCATCAAACCATACCAATATGG...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGCCAGATTACCCATATaGGTATGGTTTGATGACCCA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVARLPI*VWFDDP
Trigger: TGGGTCATCAAACCATACCAATATGGGTAATCTGGC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATTTGCCACTTGTACTTaGGAGAAGACCAATGGTCTC +
Preference number: 5 (lower is better)
Translates to: YKQTHSYPSQELCHQLELFATCT*EKTNGL
Trigger: GAGACCATTGGTCTTCTCCAAAGTACAAGTGGCAAA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTTGCCACTTGTACTTaGGAGAAGACCAATGGTCTC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFATCT*EKTNGL
Trigger: GAGACCATTGGTCTTCTCCAAAGTACAAGTGGCAAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACACTGAATGACAGACTGTaGGGAGACCATGTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: CTILITLLYMEACGRLITLNDRL*GDHVSY
Trigger: GTAGGACACATGGTCTCCCAACAGTCTGTCATTCAG...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp GCTTTGATCAAAGATCCAAGAATATTTGTTCTACCAGGCTGGAATGAATGTGGTCGTGGTTCTGCAATATaGAAAGGATCCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: ALIKDPRIFVLPGWNECGRGSAI*KGSSFW
Trigger: CCAGAAAGAGGATCCTTTCAATATTGCAGAACCACG...ACCACATTCATTCCAGCCTGGTAGAACAAATATTCTTGGATCTTTGATCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCGTGGTTCTGCAATATaGAAAGGATCCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVRGSAI*KGSSFW
Trigger: CCAGAAAGAGGATCCTTTCAATATTGCAGAACCACG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGGGAAACAAAGTGTGGTaGTGGAGAGGTGAAGACAAA +
Preference number: 5 (lower is better)
Translates to: QRGSDVITISRHILIPHRGNKVW*WRGEDK
Trigger: TTTGTCTTCACCTCTCCACAACCACACTTTGTTTCC...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGGAAACAAAGTGTGGTaGTGGAGAGGTGAAGACAAA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVGNKVW*WRGEDK
Trigger: TTTGTCTTCACCTCTCCACAACCACACTTTGTTTCC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGCTGAGAACCAAACGCTaGTGCAAAGTTCTCAATCTG +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVLRTKR*CKVLNL
Trigger: CAGATTGAGAACTTTGCACAAGCGTTTGGTTCTCAG...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCATGGGTGTCTTTACTCTaGTACTACATGGCTCACTTA +
Preference number: 5 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPWVSLL*YYMAHL
Trigger: TAAGTGAGCCATGTAGTACAAGAGTAAAGACACCCA...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGTTGCGTTTAAAACATTaGGGCTATTCCCTGACGATC +
Preference number: 5 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWLRLKH*GYSLTI
Trigger: GATCGTCAGGGAATAGCCCAAATGTTTTAAACGCAA...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGAACAATCTCAGAATTTaGGATCAGCCCAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMENNLRI*DQPRWR
Trigger: TCTCCATCTGGGCTGATCCAAAATTCTGAGATTGTT...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTGAACCAGCCAACCACTaGGGCTTCAACACTGTACTA +
Preference number: 5 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPEPANH*GFNTVL
Trigger: TAGTACAGTGTTGAAGCCCAAGTGGTTGGCTGGTTC...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAGGTCCTCTCCATCCTTaGATTACAGCTTGTACTCTG +
Preference number: 5 (lower is better)
Translates to: QNRCRPCIINNACPKFQLGPLHP*ITACTL
Trigger: CAGAGTACAAGCTGTAATCAAAGGATGGAGAGGACC...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS CCA 90 bp GGAAACAAAGTGTGGTTGTGGAGAGGTGAAGACAAACTGACAAATTaGAAACCGTGTCCAAGAGTAAAACTTGCATTAGTGGATTTTTCA +
Preference number: 5 (lower is better)
Translates to: GNKVWLWRGEDKLTN*KPCPRVKLALVDFS
Trigger: TGAAAAATCCACTAATGCAAGTTTTACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTCTTCACCTCTCCACAACCACACTTTGTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 90 bp ATATTTGTATACCCTGAGAAATCTGACACTGAAGTCCTTACTCTATaGTCCACTTCTCCATTAGAGTTAGTGATAAAGGTCATTGGCACC +
Preference number: 5 (lower is better)
Translates to: IFVYPEKSDTEVLTL*STSPLELVIKVIGT
Trigger: GGTGCCAATGACCTTTATCACTAACTCTAATGGAGAAGTGGACCATAGAGTAAGGACTTCAGTGTCAGATTTCTCAGGGTATACAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAAACAATCTATCAGTCCTaGAAAAATACTGTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: REKEGPRTLKERLRTRTKTIYQS*KNTVGK
Trigger: CTTGCCAACAGTATTTTTCAAGGACTGATAGATTGT...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAGCCAGATTACCCATATaGGTATGGTTTGATGACCCA +
Preference number: 5 (lower is better)
Translates to: QNRCRPCIINNACPKFQLARLPI*VWFDDP
Trigger: TGGGTCATCAAACCATACCAATATGGGTAATCTGGC...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTTGCCAAGTGAGCCACTaGGTTTTCCAGACAAGGATT +
Preference number: 5 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPCQVSH*VFQTRI
Trigger: AATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCA...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGTCTCCACACTATTATTaGATACTATGCCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMESPHYY*ILCQVS
Trigger: GCTCACTTGGCATAGTATCAAATAATAGTGTGGAGA...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTGACAATGGTGCCTCATaGTCCAAAACACTGACACCT +
Preference number: 5 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPDNGAS*SKTLTP
Trigger: AGGTGTCAGTGTTTTGGACAATGAGGCACCATTGTC...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGCCTGTTGGAGGTATTaGGAGTATTCTTGCAACATA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVACWRY*EYSCNI
Trigger: TATGTTGCAAGAATACTCCAAATACCTCCAACAGGC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAATTTTTCAAAAGCCTGTaGGAGGTATTTGGAGTATTC +
Preference number: 5 (lower is better)
Translates to: REKEGPRTLKERLRTRTKFFKSL*EVFGVF
Trigger: GAATACTCCAAATACCTCCAACAGGCTTTTGAAAAA...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAGACAAACTGACAAATaGGAAACCGTGTCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVRQTDK*ETVSKS
Trigger: ACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTCT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTGGGTGTCTTTACTCTaGTACTACATGGCTCACTTA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVWVSLL*YYMAHL
Trigger: TAAGTGAGCCATGTAGTACAAGAGTAAAGACACCCA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGTTGCGTTTAAAACATTaGGGCTATTCCCTGACGATC +
Preference number: 5 (lower is better)
Translates to: QRGSDVITISRHILIPHRLRLKH*GYSLTI
Trigger: GATCGTCAGGGAATAGCCCAAATGTTTTAAACGCAA...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGAACAATCTCAGAATTTaGGATCAGCCCAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVNNLRI*DQPRWR
Trigger: TCTCCATCTGGGCTGATCCAAAATTCTGAGATTGTT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TTGCTAAAAAGCAGTTTTAGAGTAGAGCCACTGCCAATCAGTAGCTTCAAATGGAAGATCCAAGAATATTaGTTCTACCAGGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: LLKSSFRVEPLPISSFKWKIQEY*FYQAGM
Trigger: CATTCCAGCCTGGTAGAACAAATATTCTTGGATCTT...CCATTTGAAGCTACTGATTGGCAGTGGCTCTACTCTAAAACTGCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATATTCCATTACAGTGATAACGTACAGAATTCCCATGCGTTATTACACTTTCCTACAGCCTTGTTACAGTaGAGATCAAGAGAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: IFHYSDNVQNSHALLHFPTALLQ*RSREGA
Trigger: AGCACCCTCTCTTGATCTCAACTGTAACAAGGCTGT...AGGAAAGTGTAATAACGCATGGGAATTCTGTACGTTATCACTGTAATGGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGGGAAAAGGAAGGCCCAAGAACTCTTAAAGAGAGGCTGAGAACAAGAACAAAATCCTTTGATTACAGCTaGTACTCTGTACTCAATAGA +
Preference number: 5 (lower is better)
Translates to: REKEGPRTLKERLRTRTKSFDYS*YSVLNR
Trigger: TCTATTGAGTACAGAGTACAAGCTGTAATCAAAGGA...TTTTGTTCTTGTTCTCAGCCTCTCTTTAAGAGTTCTTGGGCCTTCCTTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS GCA 90 bp AGTATTCTTGCAACATACTTGCTTTATCATTTGAAGGTGTTTGGGTaGCTGGGCTCAAATTTTCTTCTTGAACCAATTCTGAGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: SILATYLLYHLKVFG*LGSNFLLEPILSVL
Trigger: GAGAACACTCAGAATTGGTTCAAGAAGAAAATTTGAGCCCAGGCACCCAAACACCTTCAAATGATAAAGCAAGTATGTTGCAAGAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGCCAGATTACCCATATaGGTATGGTTTGATGACCCA +
Preference number: 5 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRARLPI*VWFDDP
Trigger: TGGGTCATCAAACCATACCAATATGGGTAATCTGGC...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TATAAGCAGACACATTCTTATCCCTCACAGGAGTTATGTCACCAGTTGGAATTATTCTCCTTGAAGAACTaGTATTTCCCTGAGACAACA +
Preference number: 5 (lower is better)
Translates to: YKQTHSYPSQELCHQLELFSLKN*YFPETT
Trigger: TGTTGTCTCAGGGAAATACAAGTTCTTCAAGGAGAA...TAATTCCAACTGGTGACATAACTCCTGTGAGGGATAAGAATGTGTCTGCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTCTCCTTGAAGAACTaGTATTTCCCTGAGACAACA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFSLKN*YFPETT
Trigger: TGTTGTCTCAGGGAAATACAAGTTCTTCAAGGAGAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCTCCACACTATTATTaGATACTATGCCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSPHYY*ILCQVS
Trigger: GCTCACTTGGCATAGTATCAAATAATAGTGTGGAGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGACTACTTATCTGACCTaGTTTGCCACTTGTACTTTG +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVTTYLT*FATCTL
Trigger: CAAAGTACAAGTGGCAAACAAGGTCAGATAAGTAGT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACACGTGGTTCTGCAATATaGAAAGGATCCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CTILITLLYMEACGRLITRGSAI*KGSSFW
Trigger: CCAGAAAGAGGATCCTTTCAATATTGCAGAACCACG...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAACAAAATATAGGTAGCCAACAATCTCAGAATTTTGGATCAGCCCAGATGGAGTTTTTCAAAAGCCTGTaGGAGGTATTTGGAGTATTC +
Preference number: 5 (lower is better)
Translates to: QQNIGSQQSQNFGSAQMEFFKSL*EVFGVF
Trigger: GAATACTCCAAATACCTCCAACAGGCTTTTGAAAAA...CTCCATCTGGGCTGATCCAAAATTCTGAGATTGTTGGCTACCTATATTTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGAAACAAAGTGTGGTaGTGGAGAGGTGAAGACAAA +
Preference number: 5 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRGNKVW*WRGEDK
Trigger: TTTGTCTTCACCTCTCCACAACCACACTTTGTTTCC...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACACTGAGAACCAAACGCTaGTGCAAAGTTCTCAATCTG +
Preference number: 5 (lower is better)
Translates to: CTILITLLYMEACGRLITLRTKR*CKVLNL
Trigger: CAGATTGAGAACTTTGCACAAGCGTTTGGTTCTCAG...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AACCAGTGGTACTTTTCTGACGTCAGAAGAGTACATAAGACTGAAACATCACCACTATCATTCCAGGCTTaGATCAAAGATCCAAGAATA +
Preference number: 5 (lower is better)
Translates to: NQWYFSDVRRVHKTETSPLSFQA*IKDPRI
Trigger: TATTCTTGGATCTTTGATCAAAGCCTGGAATGATAG...TGGTGATGTTTCAGTCTTATGTACTCTTCTGACGTCAGAAAAGTACCACTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATGTCAGTAGAATCGCTTGATGGAATTACAGCCTTGTTACAGTTGAGATCAAGAGATGGAATTACAGCCTaGTTACAGTTGAGATCAAGA +
Preference number: 5 (lower is better)
Translates to: MSVESLDGITALLQLRSRDGITA*LQLRSR
Trigger: TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATC...TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATCAAGCGATTCTACTGACAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGACAATCTATCAGTCCTaGAAAAATACTGTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVTIYQS*KNTVGK
Trigger: CTTGCCAACAGTATTTTTCAAGGACTGATAGATTGT...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAAAGAGGTTCTGATGTTATTACTATAAGCAGACACATTCTTATCCCTCACAGGACAATCTATCAGTCCTaGAAAAATACTGTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: QRGSDVITISRHILIPHRTIYQS*KNTVGK
Trigger: CTTGCCAACAGTATTTTTCAAGGACTGATAGATTGT...CCTGTGAGGGATAAGAATGTGTCTGCTTATAGTAATAACATCAGAACCTCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTATCTCCACACTATTATTaGATACTATGCCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: QNRCRPCIINNACPKFQLSPHYY*ILCQVS
Trigger: GCTCACTTGGCATAGTATCAAATAATAGTGTGGAGA...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGCCTGTTGGAGGTATTaGGAGTATTCTTGCAACATA +
Preference number: 5 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRACWRY*EYSCNI
Trigger: TATGTTGCAAGAATACTCCAAATACCTCCAACAGGC...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTTTTTCAAAAGCCTGTaGGAGGTATTTGGAGTATTC +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVFFKSL*EVFGVF
Trigger: GAATACTCCAAATACCTCCAACAGGCTTTTGAAAAA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAAGACAAACTGACAAATaGGAAACCGTGTCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: CTILITLLYMEACGRLITRQTDK*ETVSKS
Trigger: ACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTCT...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGGAATCTGAAAGCCTGTaGAAGACTCTAAGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVESESL*KTLSFS
Trigger: AGAAAAACTTAGAGTCTTCAACAGGCTTTCAGATTC...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAAAGATCCAAGAATATTaGTTCTACCAGGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: QNRCRPCIINNACPKFQLKIQEY*FYQAGM
Trigger: CATTCCAGCCTGGTAGAACAAATATTCTTGGATCTT...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp ATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGGGTTGATGGAATTACAGCCTaGTTACAGTTGAGATCAAGA +
Preference number: 5 (lower is better)
Translates to: MSPVGITTLLISIQEHGVDGITA*LQLRSR
Trigger: TCTTGATCTCAACTGTAACAAGGCTGTAATTCCATC...AACCCCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AAGGGCATCACATTATTCTTAATAGGATCGTGTAGAAACATTCCAATGGCAGTGTCCTTTGATTACAGCTaGTACTCTGTACTCAATAGA +
Preference number: 5 (lower is better)
Translates to: KGITLFLIGSCRNIPMAVSFDYS*YSVLNR
Trigger: TCTATTGAGTACAGAGTACAAGCTGTAATCAAAGGA...CACTGCCATTGGAATGTTTCTACACGATCCTATTAAGAATAATGTGATGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGACTACTTATCTGACCTaGTTTGCCACTTGTACTTTG +
Preference number: 5 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRTTYLT*FATCTL
Trigger: CAAAGTACAAGTGGCAAACAAGGTCAGATAAGTAGT...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp CAGAACCGTTGTAGGCCATGTATAATAAATAATGCATGCCCCAAATTTCAGTTAGAATCTGAAAGCCTGTaGAAGACTCTAAGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: QNRCRPCIINNACPKFQLESESL*KTLSFS
Trigger: AGAAAAACTTAGAGTCTTCAACAGGCTTTCAGATTC...TAACTGAAATTTGGGGCATGCATTATTTATTATACATGGCCTACAACGGTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp TGCACAATATTAATTACTTTATTATACATGGAAGCCTGCGGTAGGCTGATTACAGAATCTGAAAGCCTGTaGAAGACTCTAAGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: CTILITLLYMEACGRLITESESL*KTLSFS
Trigger: AGAAAAACTTAGAGTCTTCAACAGGCTTTCAGATTC...TGTAATCAGCCTACCGCAGGCTTCCATGTATAATAAAGTAATTAATATTGTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS-3UTR CAA 90 bp AGTTATGTCACCAGTTGGAATTACAACCTTATTAATATCTATCCAAGAACACGGCTATCATTCCAGGCTTaGATCAAAGATCCAAGAATA +
Preference number: 5 (lower is better)
Translates to: SYVTSWNYNLINIYPRTRLSFQA*IKDPRI
Trigger: TATTCTTGGATCTTTGATCAAAGCCTGGAATGATAG...CCGTGTTCTTGGATAGATATTAATAAGGTTGTAATTCCAACTGGTGACATAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS GCA 72 bp CTAACCAAAGACTGCAAGAACCCCCAGGAGGTCCTCTaGGAGGGGAAGGCCGCGGCTGACGCCGCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: LTKDCKNPQEVL*EGKAAADAAGS
Trigger: GGAGCCGGCGGCGTCAGCCGCGGCCTTCCCCTCGCAGAGGACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 72 bp TACTGCCGGTACCTCCGCCGCCACTCAGGAACCCACTaGCGATTTTCATACCCCGGAGGAGGCGGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: YCRYLRRHSGTH*RFSYPGGGGSR
Trigger: GCGGGACCCGCCTCCTCCGGGGTATGAAAATCGGCAGTGGGTTCCTGAGTGGCGGCGGAGGTACCGGCAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294740.3
CDS CCA 72 bp GCCGGCCGGGTGAAGCTGGTGACCGGGGGAAGACGGTaGTTGAACATAACCATACCCTGGGGAAAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: AGRVKLVTGGRR*LNITIPWGKVG
Trigger: ACCCACCTTTCCCCAGGGTATGGTTATGTTCAACCACCGTCTTCCCCCGGTCACCAGCTTCACCCGGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS CAA 72 bp GGCCGGGTGAAGCTGGTGACCGGGGGAAGACGGTGGTaGAACATAACCATACCCTGGGGAAAGGTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: GRVKLVTGGRRW*NITIPWGKVGS
Trigger: GGAACCCACCTTTCCCCAGGGTATGGTTATGTTCAACCACCGTCTTCCCCCGGTCACCAGCTTCACCCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS CCA 72 bp ACCGGGGGAAGACGGTGGTTGAACATAACCATACCCTaGGGAAAGGTGGGTTCCATCTCTGCCCTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: TGGRRWLNITIP*GKVGSISALLP
Trigger: CGGCAGGAGGGCAGAGATGGAACCCACCTTTCCCCAGGGTATGGTTATGTTCAACCACCGTCTTCCCCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294740.3
ENST00000367353.2
CDS CAA 90 bp TGGTGGTGGGACTGCTGCTCCTCAGGATCCGCGGGTTTCTCCTGTTaGATGCTAACCAAAGACTGCAAGAACCCCCAGGAGGTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: WWWDCCSSGSAGFSC*MLTKDCKNPQEVLC
Trigger: GCAGAGGACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCATCAAACAGGAGAAACCCGCGGATCCTGAGGAGCAGCAGTCCCACCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 72 bp TCCGCGGGTTTCTCCTGTTTGATGCTAACCAAAGACTaGAAGAACCCCCAGGAGGTCCTCTGCGAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: SAGFSCLMLTKD*KNPQEVLCEGK
Trigger: CTTCCCCTCGCAGAGGACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCATCAAACAGGAGAAACCCGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp GACTGCTGCTCCTCAGGATCCGCGGGTTTCTCCTGTTaGATGCTAACCAAAGACTGCAAGAACCCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: DCCSSGSAGFSC*MLTKDCKNPQE
Trigger: CTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCATCAAACAGGAGAAACCCGCGGATCCTGAGGAGCAGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS TCA 72 bp GGTGCCTCATTGTCCAAAACACTGACACCTGCAGACTaGATGACAGACTGTTGGGAGACCATGTGTCCTACG +
Preference number: 6 (lower is better)
Translates to: GASLSKTLTPAD*MTDCWETMCPT
Trigger: CGTAGGACACATGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTGTCAGTGTTTTGGACAATGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp ACATTAGTGTCCTGCTTTGGCTCCTCAGTGCCATGGTaGTCATCAGTCCTGCTACTGCTGCTGAGTAATACG +
Preference number: 6 (lower is better)
Translates to: TLVSCFGSSVPW*SSVLLLLLSNT
Trigger: CGTATTACTCAGCAGCAGTAGCAGGACTGATGACCACCATGGCACTGAGGAGCCAAAGCAGGACACTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp CCTGGCCACTTTTGGGACCTTACCTGTAACTCTGGCTaGTGGGTGTCTTTACTCTTGTACTACATGGCTCAC +
Preference number: 6 (lower is better)
Translates to: PGHFWDLTCNSG*WVSLLLYYMAH
Trigger: GTGAGCCATGTAGTACAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGTAAGGTCCCAAAAGTGGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp TTGACATTAGTGTCCTGCTTTGGCTCCTCAGTGCCATaGTGGTCATCAGTCCTGCTACTGCTGCTGAGTAAT +
Preference number: 6 (lower is better)
Translates to: LTLVSCFGSSVP*WSSVLLLLLSN
Trigger: ATTACTCAGCAGCAGTAGCAGGACTGATGACCACCATGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp GATCACAGATATGAGGTTTCTGACTTGGGGAGAGGATaGCACCTTCTCCATCTCCAACCAAAGAAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: DHRYEVSDLGRG*HLLHLQPKKVW
Trigger: CCAAACCTTCTTTGGTTGGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCATATCTGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp GGCCACTTTTGGGACCTTACCTGTAACTCTGGCTGGTaGGTGTCTTTACTCTTGTACTACATGGCTCACTTA +
Preference number: 6 (lower is better)
Translates to: GHFWDLTCNSGW*VSLLLYYMAHL
Trigger: TAAGTGAGCCATGTAGTACAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGTAAGGTCCCAAAAGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp AAAATTACATTAGAAGACCTCCAGCCTGGCCACTTTTaGGACCTTACCTGTAACTCTGGCTGGTGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: KITLEDLQPGHF*DLTCNSGWWVS
Trigger: AGACACCCACCAGCCAGAGTTACAGGTAAGGTCCCAAAAGTGGCCAGGCTGGAGGTCTTCTAATGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp TTCGGAAAGCAGCACTACAGTGATCACAGATATGAGGTTTCTGACTaGGGGAGAGGATGGCACCTTCTCCATCTCCAACCAAAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: FGKQHYSDHRYEVSD*GRGWHLLHLQPKKV
Trigger: AACCTTCTTTGGTTGGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCATATCTGTGATCACTGTAGTGCTGCTTTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp GGTCATTGGCACCCTGCTGCCCGACTTAAACTGAGAACCAAACGCTaGTGCAAAGTTCTCAATCTGATACGTTGTTCTAGGCTCTATGTC +
Preference number: 6 (lower is better)
Translates to: GHWHPAARLKLRTKR*CKVLNLIRCSRLYV
Trigger: GACATAGAGCCTAGAACAACGTATCAGATTGAGAACTTTGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAGCAGGGTGCCAATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS TCA 72 bp GAGGACTGGAAGGCTGATGAAGTCTCTAAGTTCTTCTaGGAATCTATCAGATCATCCAGCTCCTGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: EDWKADEVSKFF*ESIRSSSSWEG
Trigger: ACCTTCCCAGGAGCTGGATGATCTGATAGATTCTCAGAAGAACTTAGAGACTTCATCAGCCTTCCAGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 72 bp ACCTTCTCCATCTCCAACCAAAGAAGGTTTGGAAGATaGACTTGGCTTCCTCTTGGCTTTGATTCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: TFSISNQRRFGR*TWLPLGFDSLR
Trigger: TCTCAGGGAATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTGGAGATGGAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 72 bp CCTGCTGCCCGACTTAAACTGAGAACCAAACGCTTGTaGAAAGTTCTCAATCTGATACGTTGTTCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: PAARLKLRTKRL*KVLNLIRCSRL
Trigger: GAGCCTAGAACAACGTATCAGATTGAGAACTTTGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp CACCCTGCTGCCCGACTTAAACTGAGAACCAAACGCTaGTGCAAAGTTCTCAATCTGATACGTTGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: HPAARLKLRTKR*CKVLNLIRCSR
Trigger: CCTAGAACAACGTATCAGATTGAGAACTTTGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAGCAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp CTCATTGTCCAAAACACTGACACCTGCAGACTGAATGACAGACTGTaGGGAGACCATGTGTCCTACGTTTATAGAAAAGGCACTGTTGCT +
Preference number: 6 (lower is better)
Translates to: LIVQNTDTCRLNDRL*GDHVSYVYRKGTVA
Trigger: AGCAACAGTGCCTTTTCTATAAACGTAGGACACATGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTGTCAGTGTTTTGGACAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp TTTGGCAATGAAGATGGCAACACTGAGGTAACAGATTaGCCGAAACCACACTCCAAAGGAGACGTAGTGTAT +
Preference number: 6 (lower is better)
Translates to: FGNEDGNTEVTD*PKPHSKGDVVY
Trigger: ATACACTACGTCTCCTTTGGAGTGTGGTTTCGGCCAATCTGTTACCTCAGTGTTGCCATCTTCATTGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp GTCCACTTCTCCATTAGAGTTAGTGATAAAGGTCATTaGCACCCTGCTGCCCGACTTAAACTGAGAACCAAA +
Preference number: 6 (lower is better)
Translates to: VHFSIRVSDKGH*HPAARLKLRTK
Trigger: TTTGGTTCTCAGTTTAAGTCGGGCAGCAGGGTGCCAATGACCTTTATCACTAACTCTAATGGAGAAGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp CAAAACACTGACACCTGCAGACTGAATGACAGACTGTaGGGAGACCATGTGTCCTACGTTTATAGAAAAGGC +
Preference number: 6 (lower is better)
Translates to: QNTDTCRLNDRL*GDHVSYVYRKG
Trigger: GCCTTTTCTATAAACGTAGGACACATGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTGTCAGTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp ACTTGGCTTCCTCTTGGCTTTGATTCCCTGAGATTCTaGCTTTGGCCTTTTTGCCTTTTTGACATTAGTGTC +
Preference number: 6 (lower is better)
Translates to: TWLPLGFDSLRF*LWPFCLFDISV
Trigger: GACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGCCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS TCA 72 bp CTGAGGTGTGTAAATCCACTCGTGGTTCTGCAATATTaGAAGGATCCTCTTTCTGGCTTTCTGATTTGTTGG +
Preference number: 6 (lower is better)
Translates to: LRCVNPLVVLQY*KDPLSGFLICW
Trigger: CCAACAAATCAGAAAGCCAGAAAGAGGATCCTTTCAATATTGCAGAACCACGAGTGGATTTACACACCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp GTGTGGTTGTGGAGAGGTGAAGACAAACTGACAAATTaGAAACCGTGTCCAAGAGTAAAACTTGCATTAGTG +
Preference number: 6 (lower is better)
Translates to: VWLWRGEDKLTN*KPCPRVKLALV
Trigger: CACTAATGCAAGTTTTACTCTTGGACACGGTTTCCAATTTGTCAGTTTGTCTTCACCTCTCCACAACCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp ACTCTGGCTGGTGGGTGTCTTTACTCTTGTACTACATaGCTCACTTACATCAGACATCATATTTGTATACCC +
Preference number: 6 (lower is better)
Translates to: TLAGGCLYSCTT*LTYIRHHICIP
Trigger: GGGTATACAAATATGATGTCTGATGTAAGTGAGCCATGTAGTACAAGAGTAAAGACACCCACCAGCCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp CTTACCTGTAACTCTGGCTGGTGGGTGTCTTTACTCTaGTACTACATGGCTCACTTACATCAGACATCATAT +
Preference number: 6 (lower is better)
Translates to: LTCNSGWWVSLL*YYMAHLHQTSY
Trigger: ATATGATGTCTGATGTAAGTGAGCCATGTAGTACAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp TGCCACTTGTACTTTGGAGAAGACCAATGGTCTCCACACTATTATTaGATACTATGCCAAGTGAGCCACTTGGTTTTCCAGACAAGGATT +
Preference number: 6 (lower is better)
Translates to: CHLYFGEDQWSPHYY*ILCQVSHLVFQTRI
Trigger: AATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCATAGTATCAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAAGTACAAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp TTTTGGGACCTTACCTGTAACTCTGGCTGGTGGGTGTCTTTACTCTaGTACTACATGGCTCACTTACATCAGACATCATATTTGTATACC +
Preference number: 6 (lower is better)
Translates to: FWDLTCNSGWWVSLL*YYMAHLHQTSYLYT
Trigger: GGTATACAAATATGATGTCTGATGTAAGTGAGCCATGTAGTACAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGTAAGGTCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS TCA 72 bp TCTAAGTTTTTCTGTTCCTTCTGGCTAGTCAATTTCTaGGATGAGGACTGGAAGGCTGATGAAGTCTCTAAG +
Preference number: 6 (lower is better)
Translates to: SKFFCSFWLVNF*DEDWKADEVSK
Trigger: CTTAGAGACTTCATCAGCCTTCCAGTCCTCATCTCAGAAATTGACTAGCCAGAAGGAACAGAAAAACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 72 bp CTTCCTTTCTTAAAGATCAATTTTGGCACCCTCTTCTaGAGTTCATCTATTCCAGTGCCAATTATGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LPFLKINFGTLF*SSSIPVPIMPP
Trigger: TGGAGGCATAATTGGCACTGGAATAGATGAACTGCAGAAGAGGGTGCCAAAATTGATCTTTAAGAAAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 72 bp GAAGACCAATGGTCTCCACACTATTATTTGATACTATaGCAAGTGAGCCACTTGGTTTTCCAGACAAGGATT +
Preference number: 6 (lower is better)
Translates to: EDQWSPHYYLIL*QVSHLVFQTRI
Trigger: AATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCATAGTATCAAATAATAGTGTGGAGACCATTGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CCA 72 bp TACCCTGAGAAATCTGACACTGAAGTCCTTACTCTATaGTCCACTTCTCCATTAGAGTTAGTGATAAAGGTC +
Preference number: 6 (lower is better)
Translates to: YPEKSDTEVLTL*STSPLELVIKV
Trigger: GACCTTTATCACTAACTCTAATGGAGAAGTGGACCATAGAGTAAGGACTTCAGTGTCAGATTTCTCAGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp CACATGTGCGCCTGTGCTTCAACAATCTATCAGTCCTaGAAAAATACTGTTGGCAAGTGTCACACTTATATG +
Preference number: 6 (lower is better)
Translates to: HMCACASTIYQS*KNTVGKCHTYM
Trigger: CATATAAGTGTGACACTTGCCAACAGTATTTTTCAAGGACTGATAGATTGTTGAAGCACAGGCGCACATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp TACTTTGGAGAAGACCAATGGTCTCCACACTATTATTaGATACTATGCCAAGTGAGCCACTTGGTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: YFGEDQWSPHYY*ILCQVSHLVFQ
Trigger: CTGGAAAACCAAGTGGCTCACTTGGCATAGTATCAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp CAATGGTCTCCACACTATTATTTGATACTATGCCAAGTGAGCCACTaGGTTTTCCAGACAAGGATTTCTGTCCTACTATGTCTGGTAATG +
Preference number: 6 (lower is better)
Translates to: QWSPHYYLILCQVSH*VFQTRISVLLCLVM
Trigger: CATTACCAGACATAGTAGGACAGAAATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCATAGTATCAAATAATAGTGTGGAGACCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp AAAGGAGACGTAGTGTATATTTGTTTTTCTGGAAACAAAGTGTGGTaGTGGAGAGGTGAAGACAAACTGACAAATTGGAAACCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: KGDVVYICFSGNKVW*WRGEDKLTNWKPCP
Trigger: TGGACACGGTTTCCAATTTGTCAGTTTGTCTTCACCTCTCCACAACCACACTTTGTTTCCAGAAAAACAAATATACACTACGTCTCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS TCA 72 bp GACTTTGTTTTTCTCCTTGAAGAACTTGTATTTCCCTaGGACAACACAGCCAGATTACCCATATTGGTATGG +
Preference number: 6 (lower is better)
Translates to: DFVFLLEELVFP*DNTARLPILVW
Trigger: CCATACCAATATGGGTAATCTGGCTGTGTTGTCTCAGGGAAATACAAGTTCTTCAAGGAGAAAAACAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS GCA 72 bp GCAACATACTTGCTTTATCATTTGAAGGTGTTTGGGTaGCTGGGCTCAAATTTTCTTCTTGAACCAATTCTG +
Preference number: 6 (lower is better)
Translates to: ATYLLYHLKVFG*LGSNFLLEPIL
Trigger: CAGAATTGGTTCAAGAAGAAAATTTGAGCCCAGGCACCCAAACACCTTCAAATGATAAAGCAAGTATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp CCACACTATTATTTGATACTATGCCAAGTGAGCCACTaGGTTTTCCAGACAAGGATTTCTGTCCTACTATGT +
Preference number: 6 (lower is better)
Translates to: PHYYLILCQVSH*VFQTRISVLLC
Trigger: ACATAGTAGGACAGAAATCCTTGTCTGGAAAACCAAGTGGCTCACTTGGCATAGTATCAAATAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp CATCATAATTACTACTTATCTGACCTTGTTTGCCACTaGTACTTTGGAGAAGACCAATGGTCTCCACACTAT +
Preference number: 6 (lower is better)
Translates to: HHNYYLSDLVCH*YFGEDQWSPHY
Trigger: ATAGTGTGGAGACCATTGGTCTTCTCCAAAGTACAAGTGGCAAACAAGGTCAGATAAGTAGTAATTATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp GCATGGCATCATCATAATTACTACTTATCTGACCTTGTTTGCCACTaGTACTTTGGAGAAGACCAATGGTCTCCACACTATTATTTGATA +
Preference number: 6 (lower is better)
Translates to: AWHHHNYYLSDLVCH*YFGEDQWSPHYYLI
Trigger: TATCAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAAGTACAAGTGGCAAACAAGGTCAGATAAGTAGTAATTATGATGATGCCATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 90 bp TCTTTACTCTTGTACTACATGGCTCACTTACATCAGACATCATATTaGTATACCCTGAGAAATCTGACACTGAAGTCCTTACTCTATGGT +
Preference number: 6 (lower is better)
Translates to: SLLLYYMAHLHQTSY*YTLRNLTLKSLLYG
Trigger: ACCATAGAGTAAGGACTTCAGTGTCAGATTTCTCAGGGTATACAAATATGATGTCTGATGTAAGTGAGCCATGTAGTACAAGAGTAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS TCA 72 bp CTTTGTAAAACCTCATCAGGAATTCCAGACTTGTCATaGCAAGATTTAATTTCAGCATTTAGAGCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: LCKTSSGIPDLS*QDLISAFRAEE
Trigger: CTCCTCAGCTCTAAATGCTGAAATTAAATCTTGTCATGACAAGTCTGGAATTCCTGATGAGGTTTTACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2
CDS CAA 72 bp TTGTACTACATGGCTCACTTACATCAGACATCATATTaGTATACCCTGAGAAATCTGACACTGAAGTCCTTA +
Preference number: 6 (lower is better)
Translates to: LYYMAHLHQTSY*YTLRNLTLKSL
Trigger: TAAGGACTTCAGTGTCAGATTTCTCAGGGTATACAAATATGATGTCTGATGTAAGTGAGCCATGTAGTACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294740.3
ENST00000367352.3
ENST00000367353.2