RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF276 (Homo sapiens)

Ensembl gene IDs: ENSG00000158805

Ensembl transcript IDs: ENST00000289816.9, ENST00000443381.7, ENST00000561536.5, ENST00000562530.5, ENST00000563541.1, ENST00000563983.5, ENST00000564004.5, ENST00000568064.5, ENST00000568295.5, ENST00000569426.1

Found 1087 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCACAGCTGCTGGCTaGTCGTGGGGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: GRHGLRTCSSLTAAG*SWGLRPRGERRPPE
Trigger: CTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGCCAGCAGCTGTGAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp TCCAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTaGACACGAAGGGTGAGGCTGACACAGCCACTGCGGAGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: SSTKGGQHPPTLPCG*TRRVRLTQPLRSPG
Trigger: GCCTGGACTCCGCAGTGGCTGTGTCAGCCTCACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
3UTR TCA 90 bp CTCTCTCACAGCTGCTGGCTGATCGTGGGGACTGCGACCCAGAGGTaGGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTGACGCTG +
Preference number: 1 (lower is better)
Translates to: LSHSCWLIVGTATQR*APPSRADSRLPLTL
Trigger: CAGCGTCAGGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGCCAGCAGCTGTGAGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp CACAGCCACTGCGGAGTCCAGGCTGCTAGAGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: HSHCGVQAARGAHPH*RPQVGSGFTAWPSV
Trigger: CACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTGAGGATGAGCACCTCTAGCAGCCTGGACTCCGCAGTGGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR GCA 90 bp GCATGCATGGAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTaGAGGCATCACCTCTCACAACGAAGCTTCTTCTTCCATCCGGGC +
Preference number: 1 (lower is better)
Translates to: ACMEPRPRQAGRASR*RHHLSQRSFFFHPG
Trigger: GCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR CCA 90 bp GTCCAGAGTTGCCTGAGCCACTTCTTGGTGTTGCAGACCTCAGGCTaGGGCGGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGC +
Preference number: 1 (lower is better)
Translates to: VQSCLSHFLVLQTSG*GGSSSVWPRISTPG
Trigger: GCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCAACTCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 90 bp GAGTCCAGGCTGCTAGAGGTGCTCATCCTCACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGC +
Preference number: 1 (lower is better)
Translates to: ESRLLEVLILTAVLR*VRASPPGPLWSQRG
Trigger: GCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTGAGGATGAGCACCTCTAGCAGCCTGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR GCA 90 bp GGCGGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTaGCTTTCGCTTTTTACAGGTACCTCCACCCACAGGGCTGGTCAG +
Preference number: 1 (lower is better)
Translates to: GGSSSVWPRISTPGC*LSLFTGTSTHRAGQ
Trigger: CTGACCAGCCCTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 90 bp ACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATaGAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTGCAGGC +
Preference number: 1 (lower is better)
Translates to: TCRWWEAPPCNEEHA*SPGPDRQGEPRVAG
Trigger: GCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR GCA 90 bp TGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTaGAATGAAGAGCATGCATGGAGCCCCGGCCCCGACAGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: CSPGKDTCRWWEAPP*NEEHAWSPGPDRQG
Trigger: GCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR CCA 90 bp TGGCTGGGGATACAAGCACAGTTTCACCTCCAGCTGGCAGGAGCCTaGAGCTCAAGGGTCAGGCAGGTGCAAGGGCCAGTCCCACCTCCA +
Preference number: 1 (lower is better)
Translates to: WLGIQAQFHLQLAGA*SSRVRQVQGPVPPP
Trigger: TGGAGGTGGGACTGGCCCTTGCACCTGCCTGACCCTTGAGCTCCAGGCTCCTGCCAGCTGGAGGTGAAACTGTGCTTGTATCCCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAGACCTCACACCTGGGGGACAGAGGC +
Preference number: 1 (lower is better)
Translates to: VSALCLVMWYLRDAR*LHWNPQTSHLGDRG
Trigger: GCCTCTGTCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR TCA 90 bp TGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTaGGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGG +
Preference number: 1 (lower is better)
Translates to: CPGSVSAGAPWTCVH*GCGPSQTAGHTGHR
Trigger: CCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR GCA 90 bp CCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTaGCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCT +
Preference number: 1 (lower is better)
Translates to: PSQHLWVPPDGKGCL*LCSTDEQYPLASPA
Trigger: AGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGGGGGA +
Preference number: 1 (lower is better)
Translates to: QLSLSLVFGHVVLEG*PLPALEPTDLTPGG
Trigger: TCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR TCA 90 bp GGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGCTCCACAGATaGGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCTG +
Preference number: 1 (lower is better)
Translates to: GPARWEGLSVPLLHR*AVSLGITCYLSSSL
Trigger: CAGACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCACAGACAACCCTTCCCATCTGGCGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp CAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTaGTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTT +
Preference number: 1 (lower is better)
Translates to: QHLWVPPDGKGCLCL*STDEQYPLASPATF
Trigger: AAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 90 bp GTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCC +
Preference number: 1 (lower is better)
Translates to: VCVSGCTMDMCTLRL*AFSNRRPHWSQAKS
Trigger: GGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR TCA 90 bp CAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACC +
Preference number: 1 (lower is better)
Translates to: QSPAQSQPCVWSCGT*GMPAACTGTHRPHT
Trigger: GGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR GCA 90 bp AAGATGCCCACCTTGGGCCATGTGGGGGACATGAGAATTGACAGCTaGCTGGGCCATGTGCCTGCCTGGCTGGCAATACAACTCGACTAT +
Preference number: 1 (lower is better)
Translates to: KMPTLGHVGDMRIDS*LGHVPAWLAIQLDY
Trigger: ATAGTCGAGTTGTATTGCCAGCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTCTCATGTCCCCCACATGGCCCAAGGTGGGCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp TCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTaGAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACC +
Preference number: 1 (lower is better)
Translates to: SGLWAFLLMSYLRTW*SSLGVGARSPWPPT
Trigger: GGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: VSALCLVMWYLRDAR*LHWNPQTSHCKGLA
Trigger: AGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR GCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGG +
Preference number: 1 (lower is better)
Translates to: QLSLSLVFGHVVLEG*PLPALEPTDLTLQR
Trigger: CCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 90 bp GCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTaGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: ASGLWAFLLMSYLRT*CSSLGVGARSPWPP
Trigger: AGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 90 bp TCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACC +
Preference number: 1 (lower is better)
Translates to: SQAKSSSVSALCLVM*YLRDARCLHWNPQT
Trigger: GGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR TCA 90 bp CAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACT +
Preference number: 1 (lower is better)
Translates to: QSPAQSQPCVWSCGT*GMPAACTGTHRPHT
Trigger: AGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 90 bp GGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTaGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTGAGCCTCTTC +
Preference number: 1 (lower is better)
Translates to: GLSFNVLFEDVVQQP*CGCSKSLASYLSLF
Trigger: GAAGAGGCTCAGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 90 bp ATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTC +
Preference number: 1 (lower is better)
Translates to: MCTLRLWAFSNRRPH*SQAKSSSVSALCLV
Trigger: GACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CCA 90 bp CAGACCTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCG +
Preference number: 1 (lower is better)
Translates to: QTSHCKGLAPECRIW*TRRCFRCLKVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 90 bp CCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACAT +
Preference number: 1 (lower is better)
Translates to: PQTSHCKGLAPECRI*WTRRCFRCLKVCPH
Trigger: ATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR TCA 90 bp CCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTaGAGCTGGTCCAGCTCTTCGTGGCTGGGGATACAAGCACAGTTT +
Preference number: 1 (lower is better)
Translates to: PSGKRPSCMLLWTCT*SWSSSSWLGIQAQF
Trigger: AAACTGTGCTTGTATCCCCAGCCACGAAGAGCTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 90 bp AGCAATAAGATAATTTACTGGCTCACTGGTCAACCCCAGGACCAATaGGCCTATCATGGGGACTGCCTCTCTCTGCACCACACCCACCCT +
Preference number: 1 (lower is better)
Translates to: SNKIIYWLTGQPQDQ*AYHGDCLSLHHTHP
Trigger: AGGGTGGGTGTGGTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATTATCTTATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR TCA 90 bp CTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTaGAGGTTTGTCCACATTCGTCACAGATATAGTTCCGCACCTCTG +
Preference number: 1 (lower is better)
Translates to: LPNVAFGGREGASAA*RFVHIRHRYSSAPL
Trigger: CAGAGGTGCGGAACTATATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 90 bp CTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTTCTTCCGAATTCTTaGTTCTTCAGACTTCTTGGCTTCTTTGCTTTCACTCTTCTTACC +
Preference number: 1 (lower is better)
Translates to: LLLPSGLGSRLLPNS*FFRLLGFFAFTLLT
Trigger: GGTAAGAAGAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACCAAGAATTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
3UTR CCA 90 bp GTTTGTGCAGCAATCCTCGAGTGTTTAGAGAAGAGGAAGATATCCTaGCTGGCACTCTTTCAGTTGACAGAGAGTGGTAAGAAACACGCT +
Preference number: 1 (lower is better)
Translates to: VCAAILECLEKRKIS*LALFQLTESGKKHA
Trigger: AGCGTGTTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCAGCCAGGATATCTTCCTCTTCTCTAAACACTCGAGGATTGCTGCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 90 bp GCTTGGGTCCCGGCTTCTTCCGAATTCTTGGTTCTTCAGACTTCTTaGCTTCTTTGCTTTCACTCTTCTTACCAGAGACTTTCCTTTCTG +
Preference number: 1 (lower is better)
Translates to: AWVPASSEFLVLQTS*LLCFHSSYQRLSFL
Trigger: CAGAAAGGAAAGTCTCTGGTAAGAAGAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACCAAGAATTCGGAAGAAGCCGGGACCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
3UTR TCA 90 bp CTCTTTTCAGAGGCATCTTGCAAATGGTTAAGAACGAGCCCTCCTTaGGGTTCCTTGCTAAGTAAGTTTATAAGCTCCATTTTAGTTGGG +
Preference number: 1 (lower is better)
Translates to: LFSEASCKWLRTSPP*GSLLSKFISSILVG
Trigger: CCCAACTAAAATGGAGCTTATAAACTTACTTAGCAAGGAACCTCAAGGAGGGCTCGTTCTTAACCATTTGCAAGATGCCTCTGAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 90 bp TGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAATCAATTATTTATGAACTGTCCGGCC +
Preference number: 1 (lower is better)
Translates to: WSSCCTKKWITNLLD*FSGERNQLFMNCPA
Trigger: GGCCGGACAGTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
3UTR-3UTR CCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGGCTCGGTGGCCCAGGTaGTGGTTCCGCCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQARWPR*WFRLQG
Trigger: CCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGC...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTCCTCCGACCCTCCCATaGGGGTGCACACGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLPPTLP*GCTRRV
Trigger: CACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGG...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TGGGGGCAGGGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCCCTCCGACCCTCCCATaGGGGTGCACACGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: WGQGRSRTSSWCSLMCFFPPTLP*GCTRRV
Trigger: CACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGG...GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCCCTGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568295.5
3UTR-3UTR CCA 90 bp CTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGGGGGACGAGGGCCACAGCCCTaGGAGGGGGTCCTGACTCAC +
Preference number: 2 (lower is better)
Translates to: LEGCPLPALEPTDLTPGGRGPQP*EGVLTH
Trigger: GTGAGTCAGGACCCCCTCCCAGGGCTGTGGCCCTCG...TCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR-3UTR CCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTGGCTCCTCCTCCGTGTaGCCCCGGATCAGCACACCA +
Preference number: 2 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPGSSSV*PRISTP
Trigger: TGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 90 bp AGCATGCATGGAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTaGCAGGCATCACCTCTCACAACGAAGCTTCTTCTTCCATCCGGG +
Preference number: 2 (lower is better)
Translates to: SMHGAPAPTGRASLA*QASPLTTKLLLPSG
Trigger: CCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR-3UTR GCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCG +
Preference number: 2 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQGAHPH*RPQVGS
Trigger: CGAACCCACCTGAGGACGGCAGTGAGGATGAGCACC...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQNRRPH*SQAKSS
Trigger: GCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTT...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTGCCATGTGGGGGACATaGGAATTGACAGCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLAMWGT*ELTAAW
Trigger: CCAGGCAGCTGTCAATTCTCATGTCCCCCACATGGC...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCTCTTCTGACGGGACCTaGCACTGCACACCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASSSDGT*HCTPAQ
Trigger: CTGGGCTGGTGTGCAGTGGCAGGTCCCGTCAGAAGA...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 2 (lower is better)
Translates to: SCRQRLGTRPCSPGKDTCGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...ACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp CTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAA +
Preference number: 2 (lower is better)
Translates to: LPSSGGFGLHRLALCGHRVVLEG*PLPALE
Trigger: TTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC...TCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTCTGGGTCCCGCCAGATaGGAAGGGTTGTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPLGPAR*EGLSVP
Trigger: AGGCACAGACAACCCTTCCCATCTGGCGGGACCCAG...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAGCTCGGTGGCCCAGGTaGTGGTTCCGCCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQAARWPR*WFRLQG
Trigger: CCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGC...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGGGGGGACATGAGAATTaGCAGCTGCCTGGGCCATGT +
Preference number: 2 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVGGHEN*QLPGPC
Trigger: ACATGGCCCAGGCAGCTGTCAATTCTCATGTCCCCC...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAGCACCTCTGTGTGGATaGGCTTCACGTGGCGCTGCA +
Preference number: 2 (lower is better)
Translates to: PLPALEPTDLTLQRLGSRAPLCG*ASRGAA
Trigger: TGCAGCGCCACGTGAAGCTCATCCACACAGAGGTGC...TCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAAGACGGGACCTGCCACTaGACACCAGCCCAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: HAAEAQMRRAALFRGILQDGTCH*TPAQLP
Trigger: CGGGAGCTGGGCTGGTGTGCAGTGGCAGGTCCCGTC...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTTGGGCCATGTGGGGGCTGATCGTGGGGACTaGGACCCAGAGGTGAGCGCC +
Preference number: 2 (lower is better)
Translates to: LLTRGRGNVKMPTLGHVGADRGD*DPEVSA
Trigger: GGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGC...CCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTATGAGAATTGACAGCTaGCTGGGCCATGTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLMRIDS*LGHVPA
Trigger: GGCAGGCACATGGCCCAGGCAGCTGTCAATTCTCAT...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCATTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 2 (lower is better)
Translates to: GRSRTSSWCSLMCFFMPSLRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...TGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCTCTCTCACAGCTGCTaGCTGATCGTGGGGACTGCG +
Preference number: 2 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASLSHSC*LIVGTA
Trigger: CGCAGTCCCCACGATCAGCCAGCAGCTGTGAGAGAG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp CGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGG +
Preference number: 2 (lower is better)
Translates to: RPQVGSGFTAWPSVVTEGCTLRL*AFSNRR
Trigger: CCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA...CCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCACCGCCTGGCCCTCTGTaGTCACAGAGGGGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQAPPGPL*SQRGSV
Trigger: CACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGG...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp TGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCCCGACTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 2 (lower is better)
Translates to: WWEAPPCNEEHAWSPGPDSSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...GTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR CAA 90 bp ATAATAGGCAGAGATGTCCAGAGTTGCCTGAGCCACTTCTTGGTGTaGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: IIGRDVQSCLSHFLV*QTSGWGGSSSVWPR
Trigger: CCGGGGCCACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCTGCCTATTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACCAGAGGAAGGCTACTTaGGCCGGACACCAAGCCCGC +
Preference number: 2 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHQRKAT*AGHQAR
Trigger: GCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTG...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAACTCACAGCTGCTGGCTaGTCGTGGGGACTGCGACCC +
Preference number: 2 (lower is better)
Translates to: HAAEAQMRRAALFRGILQLTAAG*SWGLRP
Trigger: GGGTCGCAGTCCCCACGATCAGCCAGCAGCTGTGAG...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTTGTTCCGGCACAGCATaGAGACTATGGGGGACACAC +
Preference number: 2 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPCSGTA*RLWGTH
Trigger: GTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACA...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGTCTGTGTCAGCGGGTaGACCATGGACATGTGTACA +
Preference number: 2 (lower is better)
Translates to: LPSSGGFGLHRLALCGHRVCVSG*TMDMCT
Trigger: TGTACACATGTCCATGGTGCACCCGCTGACACAGAC...TCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp CCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGCGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: PAACTGTHRPHTAKAWLPRTSSW*SLMCFF
Trigger: GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCG...CGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp TGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGTGGTGGACGAGAAGGTaGTTCCGCTGCTTGAAGGTT +
Preference number: 2 (lower is better)
Translates to: CRPQVGSGFTAWPSVVTEWWTRR*FRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCA...CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTAGTTTCACCTCCAGCTaGCAGGAGCCTGGAGCTCAA +
Preference number: 2 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPSFTSS*QEPGAQ
Trigger: TTGAGCTCCAGGCTCCTGCCAGCTGGAGGTGAAACT...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAGCCCGCTGCCTGCACTaGAACCCACAGACCTCACAC +
Preference number: 2 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTARCLH*NPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCGGTGGCCCAGGTGGTaGTTCCGCCTCCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRRWPRW*FRLQGQ
Trigger: CTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCG...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR CAA 90 bp CGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTaGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: RRPHWSQAKSSSVSA*CLVMWYLRDARCLH
Trigger: GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGCCCTCCCCTGTGGTCTaGGGCCTAGTGGGCGGCATG +
Preference number: 2 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQPSPVV*GLVGGM
Trigger: CATGCCGCCCACTAGGCCTCAGACCACAGGGGAGGG...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: LKPPATLVTGKVQLSLSLWSCGT*GMPAAC
Trigger: GCAGGCAGCGGGCATCCCTCAAGTACCACATGACCA...AAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCAACTCGACTATTTCTaGCAGAGCCCCTCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASQLDYF*QSPSPV
Trigger: CACAGGGGAGGGGCTCTGGCAGAAATAGTCGAGTTG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACT +
Preference number: 2 (lower is better)
Translates to: GTRPCSPGKDTCRWWEAPLGTRP*SPGKDT
Trigger: AGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG...AGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp CCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGTGGTGCTCCTTGATGTaGTTCTTCATGCCGTCAGCG +
Preference number: 2 (lower is better)
Translates to: PAACTGTHRPHTAKAWLPWCSLM*FFMPSA
Trigger: CGCTGACGGCATGAAGAAGCACATCAAGGAGCACCA...CGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCCAGCTCTTCGTGGCTaGGGATACAAGCACAGTTTC +
Preference number: 2 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLPALRG*GYKHSF
Trigger: GAAACTGTGCTTGTATCCCCAGCCACGAAGAGCTGG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp CTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGATTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 2 (lower is better)
Translates to: LPSSGGFGLHRLALCGHRLCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...TCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp TTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: LRLWAFSNRRPHWSQAKSNRRPH*SQAKSS
Trigger: GCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTT...GGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCGGTGGCCCAGGTGGTaGTTCCGCCTCCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKRWPRW*FRLQGQ
Trigger: CTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCG...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp CCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGTCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAG +
Preference number: 2 (lower is better)
Translates to: PQTSHCKGLAPECRIWWTSGFTA*PSVVTE
Trigger: CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA...CGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp CTGCAGGTAGCGGTCGATCATGAAAACCTTGTTGCAGCCAGGGTGGGGGCAGGGTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 2 (lower is better)
Translates to: LQVAVDHENLVAARVGAGSSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...CCCTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGATCGACCGCTACCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CAA 90 bp GCACTGATAATAGGCAGAGATGTCCAGAGTTGCCTGAGCCACTTCTaGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: ALIIGRDVQSCLSHF*VLQTSGWGGSSSVW
Trigger: CCACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCTGCCTATTATCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACACAGAGGAAGGCTACTTaGGCCGGACACCAAGCCCGC +
Preference number: 2 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTQRKAT*AGHQAR
Trigger: GCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTG...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGGGGGACATGAGAATTaGCAGCTGCCTGGGCCATGT +
Preference number: 2 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHGGHEN*QLPGPC
Trigger: ACATGGCCCAGGCAGCTGTCAATTCTCATGTCCCCC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTCTCCTACTTCCATaGAGACGCGGCCATCAGGGA +
Preference number: 2 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLSLLLP*RRGHQG
Trigger: TCCCTGATGGCCGCGTCTTCATGGAAGTAGGAGAGA...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAGGTAGCGGTCGATCATaGAAACCTTGTTGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: PLPALEPTDLTLQRLGSRGSGRS*KPCCSQ
Trigger: CTGGCTGCAACAAGGTTTTCATGATCGACCGCTACC...TCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCCGACCCTCCCATaGGGGTGCACACGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLPPTLP*GCTRRV
Trigger: CACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGG...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCGCTGATCGTGGGGACTaGGACCCAGAGGTGAGCGCC +
Preference number: 2 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSADRGD*DPEVSA
Trigger: GGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGC...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGAGCACACCAGGCTGCTaGCTTTCGCTTTTTACAGGT +
Preference number: 2 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVSTPGC*LSLFTG
Trigger: ACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCT...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACAGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 2 (lower is better)
Translates to: HHGHVYIEVVGLLKPPATGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...TGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGGCCATGTGCCTGCCTaGCTGGCAATACAACTCGAC +
Preference number: 2 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHGHVPA*LAIQLD
Trigger: GTCGAGTTGTATTGCCAGCCAGGCAGGCACATGGCC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp GCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGGCCCGCTGCCTGCACTaGAACCCACAGACCTCACAC +
Preference number: 2 (lower is better)
Translates to: ALVRTLVDGGKLLPLTTKARCLH*NPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC...CTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCT +
Preference number: 2 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTTAVLR*VRASPP
Trigger: AGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CAA 90 bp TGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: WVCVSGCTMDMCTLR*WAFSNRRPHWSQAK
Trigger: CTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CAA 90 bp TTGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATaGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAG +
Preference number: 2 (lower is better)
Translates to: LSWVCVSGCTMDMCT*RLWAFSNRRPHWSQ
Trigger: CTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCAGAGGAAGGCTACTTaGGCCGGACACCAAGCCCGC +
Preference number: 2 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSQRKAT*AGHQAR
Trigger: GCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTG...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTACTGCGACCCAGAGGTaGGCGCCGCCCTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLTATQR*APPSRA
Trigger: TGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGT...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCGCACCTCTGTGTGGATaGGCTTCACGTGGCGCTGCA +
Preference number: 2 (lower is better)
Translates to: SSSVSALCLVMWYLRDARAPLCG*ASRGAA
Trigger: TGCAGCGCCACGTGAAGCTCATCCACACAGAGGTGC...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCTCCGACCCTCCCATaGGGGTGCACACGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKPPTLP*GCTRRV
Trigger: CACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGG...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCGAGTCACTCAGCGTTTaGGGGAAAATAAACCACTGG +
Preference number: 2 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLESLSV*GKINHW
Trigger: CCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACACTCCTCTCTCACAGCTaGTGGCTGATCGTGGGGACT +
Preference number: 2 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTLLSHS*WLIVGT
Trigger: AGTCCCCACGATCAGCCAGCAGCTGTGAGAGAGGAG...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGAGGTAACGTCAAGATaGCCACCTTGGGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHEVTSR*PPWAMW
Trigger: CCACATGGCCCAAGGTGGGCATCTTGACGTTACCTC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCCCTTGGCATCACCTaGTACCTTTCCAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLSLGIT*YLSSSL
Trigger: CAGACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGA...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 2 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTLRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAGGCCATGTGCCTGCCTaGCTGGCAATACAACTCGAC +
Preference number: 2 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTGHVPA*LAIQLD
Trigger: GTCGAGTTGTATTGCCAGCCAGGCAGGCACATGGCC...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACCTGCTGACAGGTACCTaGGTATCCTCAGCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHLLTGT*VSSAQA
Trigger: AGCCTGAGCTGAGGATACCCAGGTACCTGTCAGCAG...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCCTGGCCCTCTGTaGTCACAGAGGGGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCPPGPL*SQRGSV
Trigger: CACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGG...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CAA 90 bp GCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAC +
Preference number: 2 (lower is better)
Translates to: AKSSSVSALCLVMWY*RDARCLHWNPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CAA 90 bp CCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAAC +
Preference number: 2 (lower is better)
Translates to: PHWSQAKSSSVSALC*VMWYLRDARCLHWN
Trigger: GTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAACTGCGACCCAGAGGTaGGCGCCGCCCTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKTATQR*APPSRA
Trigger: TGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGT...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGGTGGGCGGCATGGGCTaGGGACCTGCTCCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSVGGMG*GPAPLS
Trigger: TGAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCAC...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTTGGCACTCTTTCAGTTaGCAGAGAGTGGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPWHSFS*QRVVRN
Trigger: GTTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCA...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp TCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: SRMSHLVDEKVLPLLEGLWSCGT*GMPAAC
Trigger: GCAGGCAGCGGGCATCCCTCAAGTACCACATGACCA...CAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGACGGGACCTGCCACTaGACACCAGCCCAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GKESIIYELSGPESLSVCDGTCH*TPAQLP
Trigger: CGGGAGCTGGGCTGGTGTGCAGTGGCAGGTCCCGTC...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CAGCCGGAGGCTCCTTCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGCAACTCGACTATTTCTaGCAGAGCCCCTCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: QPEAPSAKECSGTACRLWQLDYF*QSPSPV
Trigger: CACAGGGGAGGGGCTCTGGCAGAAATAGTCGAGTTG...CCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAATGAGAATTGACAGCTaGCTGGGCCATGTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTMRIDS*LGHVPA
Trigger: GGCAGGCACATGGCCCAGGCAGCTGTCAATTCTCAT...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGGCCGGAGGCTCCTTCTaGCAAAGAATGTTCCGGCAC +
Preference number: 2 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQAGGSF*QRMFRH
Trigger: GTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGC...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGCAAGGGTCAGGCAGGTaGAAGGGCCAGTCCCACCTC +
Preference number: 2 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVQGSGR*KGQSHL
Trigger: GAGGTGGGACTGGCCCTTGCACCTGCCTGACCCTTG...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGAGGCAGATAAGAAGGTaGGAGGGCCACAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRRQIRR*EGHSPG
Trigger: CCCAGGGCTGTGGCCCTCGCACCTTCTTATCTGCCT...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR-3UTR GCA 90 bp GATGAGCTTCACGTGGCGCTGCAGGTAGCGGTCGATCATGAAAACCTTGTTGCATTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 2 (lower is better)
Translates to: DELHVALQVAVDHENLVALRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...TGCAACAAGGTTTTCATGATCGACCGCTACCTGCAGCGCCACGTGAAGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCACGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQARTSSW*SLMCFF
Trigger: GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCG...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTGAATTGACAGCTGCCTaGGCCATGTGCCTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSELTAA*AMCLPG
Trigger: GCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTC...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp GCTCCTCCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 2 (lower is better)
Translates to: APPSHNEASSSIRAWVPALCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...AGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGTTCCGCACCTCTGTGTaGATGAGCTTCACGTGGCGC +
Preference number: 2 (lower is better)
Translates to: QLSLSLVFGHVVLEGCPLFRTSV*MSFTWR
Trigger: GCGCCACGTGAAGCTCATCCACACAGAGGTGCGGAA...CAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGC +
Preference number: 2 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHECRIW*TRRCFR
Trigger: GCGGAAGCACCTTCTCGTCCACCAAATGCGACATTC...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGC +
Preference number: 2 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTECRIW*TRRCFR
Trigger: GCGGAAGCACCTTCTCGTCCACCAAATGCGACATTC...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CAA 90 bp AAAGAGCTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTaGGGCCATGTGGGGGACATGAGAATTGACAGCTGCCTGGGCCAT +
Preference number: 2 (lower is better)
Translates to: KELLTRGRGNVKMPT*GHVGDMRIDSCLGH
Trigger: ATGGCCCAGGCAGCTGTCAATTCTCATGTCCCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAGCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 90 bp CCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACA +
Preference number: 2 (lower is better)
Translates to: PTDLTLQRLGSRMSH*VDEKVLPLLEGLST
Trigger: TGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCGCCATGTGGGGGACATaGGAATTGACAGCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: CSTDEQYPLASPATFPAVAMWGT*ELTAAW
Trigger: CCAGGCAGCTGTCAATTCTCATGTCCCCCACATGGC...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLTNLLD*FSGERN
Trigger: ATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGT...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTCATGGGCTGAGGACCTaGTCCTCTCTCACAGCTGCT +
Preference number: 2 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSHGLRT*SSLTAA
Trigger: AGCAGCTGTGAGAGAGGAGCAGGTCCTCAGCCCATG...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGGGGACTGCCTCTCTCTaGACCACACCCACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQGTASL*TTPTLL
Trigger: CAGGAGGGTGGGTGTGGTGCAGAGAGAGGCAGTCCC...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp GTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: VYIEVVGLLKPPATLVTGKDTCR*WEAPPS
Trigger: AGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...GCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CAA 90 bp GCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTaGAAGCTGGTCCAGCTCTTCGTGGCTGGGGATACAAGCACAGTT +
Preference number: 2 (lower is better)
Translates to: AIREEAFLHVAVDMY*KLVQLFVAGDTSTV
Trigger: AACTGTGCTTGTATCCCCAGCCACGAAGAGCTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTAGAGCCTCATCTCTTCTaGCGGGACCTGCCACTGCAC +
Preference number: 2 (lower is better)
Translates to: TTDLPKAFHVCAAILECLEPHLF*RDLPLH
Trigger: GTGCAGTGGCAGGTCCCGTCAGAAGAGATGAGGCTC...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGGGTAGCGGTCGATCATaGAAACCTTGTTGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: QLSLSLVFGHVVLEGCPLGSGRS*KPCCSQ
Trigger: CTGGCTGCAACAAGGTTTTCATGATCGACCGCTACC...CAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCCAGTTAATACCTCGGTaGCCGAAAAAGAGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLQLIPR*PKKSFS
Trigger: TGAGAAGCTCTTTTTCGGGCACCGAGGTATTAACTG...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTAGCCACTTCTTGGTGTTaGAGACCTCAGGCTGGGGCG +
Preference number: 2 (lower is better)
Translates to: TTDLPKAFHVCAAILECLATSWC*RPQAGA
Trigger: CGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGC...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGCTGAGGCACAAATaGGGAGGGCCGCTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSLLRHK*GGPLFS
Trigger: TGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAG...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGGTCTGTGTCAGCGGGTaGACCATGGACATGTGTACA +
Preference number: 2 (lower is better)
Translates to: LTLQRLGSRMSHLVDEKVVCVSG*TMDMCT
Trigger: TGTACACATGTCCATGGTGCACCCGCTGACACAGAC...CACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGGAATTGACAGCTGCCTaGGCCATGTGCCTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQELTAA*AMCLPG
Trigger: GCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTC...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCAGTTTCACCTCCAGCTaGCAGGAGCCTGGAGCTCAA +
Preference number: 2 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSSFTSS*QEPGAQ
Trigger: TTGAGCTCCAGGCTCCTGCCAGCTGGAGGTGAAACT...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp GTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 2 (lower is better)
Translates to: VYIEVVGLLKPPATLVTGDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...GCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp GTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCAGAGACTTTCCTTTCTaGGTAAGGCTCAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: VDGGKLLPAMKSMHGAPARDFPF*VRLKGL
Trigger: GAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCT...GGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR-3UTR CCA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTATCCCGGACCTCCTCGTaGTGCTCCTTGATGTGCTTC +
Preference number: 2 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVSRTSS*CSLMCF
Trigger: GAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGA...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CAA 90 bp GGGAAGGGTTGTCTGTGCCTCTGCTCCACAGATGAGCAGTATCCCTaGGCATCACCTGCTACCTTTCCAGCAGTCTGTAGCCATTTGTCA +
Preference number: 2 (lower is better)
Translates to: GKGCLCLCSTDEQYP*ASPATFPAVCSHLS
Trigger: TGACAAATGGCTACAGACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCACAGACAACCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 90 bp GCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTaGCAAATGGTTAAGAACGAGCCCTCCTTGAGGTTCCTTGCTAAG +
Preference number: 2 (lower is better)
Translates to: AAEAQMRRAALFRGI*QMVKNEPSLRFLAK
Trigger: CTTAGCAAGGAACCTCAAGGAGGGCTCGTTCTTAACCATTTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCTGTGGACATGTACTTaGAGCTGGTCCAGCTCTTCG +
Preference number: 2 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLLWTCT*SWSSSS
Trigger: CGAAGAGCTGGACCAGCTTCAAGTACATGTCCACAG...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR TCA 90 bp CCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGTGGACATGTGTACATTaGGGTTGTGGGCCTTCTCAA +
Preference number: 2 (lower is better)
Translates to: PQTSHCKGLAPECRIWWTWTCVH*GCGPSQ
Trigger: TTGAGAAGGCCCACAACCTCAATGTACACATGTCCA...CGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTCATGGGCTGAGGACCTaGTCCTCTCTCACAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLHGLRT*SSLTAA
Trigger: AGCAGCTGTGAGAGAGGAGCAGGTCCTCAGCCCATG...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 2 (lower is better)
Translates to: IIYELSGPESLSVCGKINGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTATTACAAGCATAACATaGAGCTCTTGTTGCACTAAA +
Preference number: 2 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLITSIT*SSCCTK
Trigger: TTTAGTGCAACAAGAGCTCCATGTTATGCTTGTAAT...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTCAACCCCAGGACCAATaGGCCTATCATGGGGACTGC +
Preference number: 2 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLQPQDQ*AYHGDC
Trigger: GCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTG...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp TCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 2 (lower is better)
Translates to: SWVCVSGCTMDMCTLRLWLCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...CCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACTCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAG +
Preference number: 2 (lower is better)
Translates to: IIYELSGPESLSVCGKINSGFTA*PSVVTE
Trigger: CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp GGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTAGAGACTTTCCTTTCTaGGTAAGGCTCAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: GTRPCSPGKDTCRWWEAPRDFPF*VRLKGL
Trigger: GAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCT...AGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
3UTR-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGGAGGTAACGTCAAGATaGCCACCTTGGGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSEVTSR*PPWAMW
Trigger: CCACATGGCCCAAGGTGGGCATCTTGACGTTACCTC...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGTCAGGGTTGGTCTCCTaGGGTTTACAGAGCACCACA +
Preference number: 2 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVSGLVS*GLQSTT
Trigger: TGTGGTGCTCTGTAAACCGCAGGAGACCAACCCTGA...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGATGTGCCTGCCTGGCTaGCAATACAACTCGACTATT +
Preference number: 2 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQMCLPG*QYNSTI
Trigger: AATAGTCGAGTTGTATTGCCAGCCAGGCAGGCACAT...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCCAATGGGCCTATCATaGGGACTGCCTCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQPMGLS*GLPLSA
Trigger: TGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGG...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp ACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGCACAGACCTCACACCTaGGGGACAGAGGCAGATAAG +
Preference number: 2 (lower is better)
Translates to: TGKVQLSLSLVFGHVVLEHRPHT*GTEADK
Trigger: CTTATCTGCCTCTGTCCCCCAGGTGTGAGGTCTGTG...CTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR-3UTR CCA 90 bp TCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 2 (lower is better)
Translates to: SWVCVSGCTMDMCTLRLWDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...CCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGTCCCTTGGCATCACCTaGTACCTTTCCAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSSLGIT*YLSSSL
Trigger: CAGACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGA...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp GCTCCTCCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 2 (lower is better)
Translates to: APPSHNEASSSIRAWVPAEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...AGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CAA 90 bp ATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGATATAGTTCCGCACCTCTGTGTGGAT +
Preference number: 2 (lower is better)
Translates to: MSHLVDEKVLPLLEG*STFVTDIVPHLCVD
Trigger: ATCCACACAGAGGTGCGGAACTATATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR TCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGGGAATCAATTATTTATaGACTGTCCGGCCCCGAGTC +
Preference number: 2 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKGINYL*TVRPRV
Trigger: GACTCGGGGCCGGACAGTTCATAAATAATTGATTCC...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGGGCTTTCCACGTTTGTaGAGCAATCCTCGAGTGTTT +
Preference number: 2 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVGFPRL*SNPRVF
Trigger: AAACACTCGAGGATTGCTGCACAAACGTGGAAAGCC...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp CAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 2 (lower is better)
Translates to: QTAGHTGHRQSPAQSQPCEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...ACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGATGTGCCTGCCTGGCTaGCAATACAACTCGACTATT +
Preference number: 2 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKMCLPG*QYNSTI
Trigger: AATAGTCGAGTTGTATTGCCAGCCAGGCAGGCACAT...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 90 bp GAGTGTTTAGAGAAGAGGAAGATATCCTGGCTGGCACTCTTTCAGTaGACAGAGAGTGGTAAGAAACACGCTGCTGAGGCACAAATGCGG +
Preference number: 2 (lower is better)
Translates to: ECLEKRKISWLALFQ*TESGKKHAAEAQMR
Trigger: CCGCATTTGTGCCTCAGCAGCGTGTTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCAGCCAGGATATCTTCCTCTTCTCTAAACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 90 bp GCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTTCTTCCGAATTCTaGGTTCTTCAGACTTCTTGGCTTCTTTGCTTTCACTCTTCTTAC +
Preference number: 2 (lower is better)
Translates to: ASSSIRAWVPASSEF*VLQTSWLLCFHSSY
Trigger: GTAAGAAGAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACCAAGAATTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
3UTR-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGATCAGCACACCAGGCTaGTGCCTTTCGCTTTTTACA +
Preference number: 2 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSISTPG*CLSLFT
Trigger: TGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGAT...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTAATGAGCAGTATCCCTTaGCATCACCTGCTACCTTTC +
Preference number: 2 (lower is better)
Translates to: TTDLPKAFHVCAAILECLMSSIP*HHLLPF
Trigger: GAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCAT...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGG +
Preference number: 2 (lower is better)
Translates to: IIYELSGPESLSVCGKINCTLRL*AFSNRR
Trigger: CCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CCA 90 bp TTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCACAAGAGACTTTCCTTTCTaGGTAAGGCTCAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: LVDEKVLPLLEGLSTFVTRDFPF*VRLKGL
Trigger: GAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCT...TGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCACATGGAGCTCTTGTTaGACTAAAAAGTGGATTACA +
Preference number: 2 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTTWSSC*TKKWIT
Trigger: TGTAATCCACTTTTTAGTGCAACAAGAGCTCCATGT...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
3UTR-3UTR CCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTATTACAAGCATAACATaGAGCTCTTGTTGCACTAAA +
Preference number: 2 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPITSIT*SSCCTK
Trigger: TTTAGTGCAACAAGAGCTCCATGTTATGCTTGTAAT...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCACATGGAGCTCTTGTTaGACTAAAAAGTGGATTACA +
Preference number: 2 (lower is better)
Translates to: CSTDEQYPLASPATFPAVTWSSC*TKKWIT
Trigger: TGTAATCCACTTTTTAGTGCAACAAGAGCTCCATGT...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTCTTCTGACGGGACCTaGCACTGCACACCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: KWITNLLDCFSGERNQLFSSDGT*HCTPAQ
Trigger: CTGGGCTGGTGTGCAGTGGCAGGTCCCGTCAGAAGA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCG +
Preference number: 2 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNGAHPH*RPQVGS
Trigger: CGAACCCACCTGAGGACGGCAGTGAGGATGAGCACC...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACCTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACT +
Preference number: 2 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNLGTRP*SPGKDT
Trigger: AGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568295.5
3UTR-3UTR CCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTAAATAAGATAATTTACTaGCTCACTGGTCAACCCCAG +
Preference number: 2 (lower is better)
Translates to: TTDLPKAFHVCAAILECLNKIIY*LTGQPQ
Trigger: CTGGGGTTGACCAGTGAGCCAGTAAATTATCTTATT...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAATAAGATAATTTACTaGCTCACTGGTCAACCCCAG +
Preference number: 2 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSNKIIY*LTGQPQ
Trigger: CTGGGGTTGACCAGTGAGCCAGTAAATTATCTTATT...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGAAGCTCCATTTTAGTTaGGACAGATTAAGCACAAAC +
Preference number: 2 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVKLHFS*DRLSTN
Trigger: GTTTGTGCTTAATCTGTCCCAACTAAAATGGAGCTT...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: CCTKKWITNLLDCFSGERKDTCR*WEAPPS
Trigger: AGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568295.5
3UTR-3UTR TCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGGGAATCAATTATTTATaGACTGTCCGGCCCCGAGTC +
Preference number: 2 (lower is better)
Translates to: CCTKKWITNLLDCFSGERGINYL*TVRPRV
Trigger: GACTCGGGGCCGGACAGTTCATAAATAATTGATTCC...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
3UTR-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACCTCCTCTCTCACAGCTaGTGGCTGATCGTGGGGACT +
Preference number: 2 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNLLSHS*WLIVGT
Trigger: AGTCCCCACGATCAGCCAGCAGCTGTGAGAGAGGAG...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR GCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: CCTKKWITNLLDCFSGERTNLLD*FSGERN
Trigger: ATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGT...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
3UTR TCA 72 bp AGCTGCTGGCTGATCGTGGGGACTGCGACCCAGAGGTaGGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SCWLIVGTATQR*APPSRADSRLP
Trigger: GGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGCCAGCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCA +
Preference number: 3 (lower is better)
Translates to: HCRPQVGSGFTA*PSVVTEGLGGP
Trigger: TGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR GCA 72 bp GGGTGGGGGCAGGGCCGCTCCCGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTCATGCCGTCAGCGCCT +
Preference number: 3 (lower is better)
Translates to: GWGQGRSRTSSW*SLMCFFMPSAP
Trigger: AGGCGCTGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCCCTGCCCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp TGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATaGAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGC +
Preference number: 3 (lower is better)
Translates to: WWEAPPCNEEHA*SPGPDRQGEPR
Trigger: GCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR GCA 72 bp GCTCCTCTCTCACAGCTGCTGGCTGATCGTGGGGACTaGGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: APLSQLLADRGD*DPEVSAALQSR
Trigger: TCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGCCAGCAGCTGTGAGAGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCGCAGAGGAAGGCTACTaGAGCCGGACACCAAGCCCG +
Preference number: 3 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLAEEGY*SRTPSP
Trigger: CGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGC...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 72 bp TGCGGAGTCCAGGCTGCTAGAGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGG +
Preference number: 3 (lower is better)
Translates to: CGVQAARGAHPH*RPQVGSGFTAW
Trigger: CCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTGAGGATGAGCACCTCTAGCAGCCTGGACTCCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR CCA 72 bp CTGCTAGAGGTGCTCATCCTCACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: LLEVLILTAVLR*VRASPPGPLWS
Trigger: TGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTGAGGATGAGCACCTCTAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp CGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGTCCTCGTGGTGCTCCTaGATGTGCTTCTTCATGCCG +
Preference number: 3 (lower is better)
Translates to: RPQVGSGFTAWPSVVTEGSSWCS*MCFFMP
Trigger: CGGCATGAAGAAGCACATCAAGGAGCACCACGAGGA...CCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp GTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGAGGTGCTTCCGCTGCTaGAAGGTTTGTCCACATTCG +
Preference number: 3 (lower is better)
Translates to: VRASPPGPLWSQRGSVAQRCFRC*KVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCT...CTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp TGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: WVRASPPGPLWSQRGSVASRMSH*VDEKVL
Trigger: AAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA...GGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGTCAAGATGCCCACCTaGGGCCATGTGGGGGACATG +
Preference number: 3 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASVKMPT*GHVGDM
Trigger: CATGTCCCCCACATGGCCCAAGGTGGGCATCTTGAC...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp GGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGC +
Preference number: 3 (lower is better)
Translates to: GSGFTAWPSVVTEGLGGPMCTLR*WAFSNR
Trigger: GCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT...TGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR GCA 72 bp AGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTaGACCACACCCACCCTCCTGCAAGAGGTCGACCCC +
Preference number: 3 (lower is better)
Translates to: RTNGPIMGTASL*TTPTLLQEVDP
Trigger: GGGGTCGACCTCTTGCAGGAGGGTGGGTGTGGTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp GCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATaGGGACTGCCTCTCTCTGCACCACACCCACCCTCC +
Preference number: 3 (lower is better)
Translates to: AHWSTPGPMGLS*GLPLSAPHPPS
Trigger: GGAGGGTGGGTGTGGTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp GTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTaGAACCCACAGACCTCACACCTGGGGGACAGAGGC +
Preference number: 3 (lower is better)
Translates to: VMWYLRDARCLH*NPQTSHLGDRG
Trigger: GCCTCTGTCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR GCA 72 bp TCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTaGCTTTCGCTTTTTACAGGTACCTCCACCCACAGG +
Preference number: 3 (lower is better)
Translates to: SSVWPRISTPGC*LSLFTGTSTHR
Trigger: CCTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 72 bp TCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTaGTGCCTTTCGCTTTTTACAGGTACCTCCACCCAC +
Preference number: 3 (lower is better)
Translates to: SSSVWPRISTPG*CLSLFTGTSTH
Trigger: GTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTGATGAGCAGTATCCCTaGGCATCACCTGCTACCTTT +
Preference number: 3 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLDEQYP*ASPATF
Trigger: AAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATC...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGG +
Preference number: 3 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTVSALC*VMWYLR
Trigger: CCTCAAGTACCACATGACCAAACACAAGGCTGAGAC...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR GCA 72 bp CACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTaGCTCTGCTCCACAGATGAGCAGTATCCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: HLWVPPDGKGCL*LCSTDEQYPLA
Trigger: TGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 72 bp GCTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACTTGTAGATGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: ASSCRQRLGTRP*SPGKDTCRWWE
Trigger: TTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAAGTCAAGATGCCCACCTaGGGCCATGTGGGGGACATG +
Preference number: 3 (lower is better)
Translates to: HAAEAQMRRAALFRGILQVKMPT*GHVGDM
Trigger: CATGTCCCCCACATGGCCCAAGGTGGGCATCTTGAC...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACTGCCTGAGCCACTTCTaGGTGTTGCAGACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHCLSHF*VLQTSG
Trigger: GCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCA...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp CTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: LKPPATLVTGKVQLSLSLLVMWY*RDARCL
Trigger: CAGGCAGCGGGCATCCCTCAAGTACCACATGACCAA...AAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp GGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGTGGTCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATC +
Preference number: 3 (lower is better)
Translates to: GFTAWPSVVTEGLGGPGGRRLGI*LLVIFI
Trigger: GATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCG...ACCACCTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp ATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCATCATGAAAACCTTGTaGCAGCCAGGGTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: MPAACTGTHRPHTAKAWLIMKTL*QPGWGQ
Trigger: CTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGAT...GAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGCAGAGGAAGGCTACTaGAGCCGGACACCAAGCCCG +
Preference number: 3 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRAEEGY*SRTPSP
Trigger: CGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp AGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGAGGGCGAGCCTCGCGTaGCAGGCATCACCTCTCACA +
Preference number: 3 (lower is better)
Translates to: SPGKDTCRWWEAPPCNEERASLA*QASPLT
Trigger: TGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCT...CTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR GCA 72 bp ACCTTGGGCCATGTGGGGGACATGAGAATTGACAGCTaGCTGGGCCATGTGCCTGCCTGGCTGGCAATACAA +
Preference number: 3 (lower is better)
Translates to: TLGHVGDMRIDS*LGHVPAWLAIQ
Trigger: TTGTATTGCCAGCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTCTCATGTCCCCCACATGGCCCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 72 bp TTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAGACCTCACACCTGGGG +
Preference number: 3 (lower is better)
Translates to: LCLVMWYLRDAR*LHWNPQTSHLG
Trigger: CCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR CCA 72 bp TTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: LRLWAFSNRRPH*SQAKSSSVSAL
Trigger: CAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CCA 72 bp AGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGGCCACACTGGTCACAG +
Preference number: 3 (lower is better)
Translates to: SGCTMDMCTLRL*AFSNRRPHWSQ
Trigger: CTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CCA 72 bp GTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTaGAACCCACAGACCTCACACTGCAAAGGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: VMWYLRDARCLH*NPQTSHCKGLA
Trigger: AGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp CGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTaGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGG +
Preference number: 3 (lower is better)
Translates to: RPCSPGKDTCRW*EAPPCNEEHAW
Trigger: CCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR-3UTR CAA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGCGTGGTGCAGCAGCCTaGGTGTGGGTGCTCGAAGTC +
Preference number: 3 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVRGAAA*VWVLEV
Trigger: GACTTCGAGCACCCACACCAAGGCTGCTGCACCACG...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCATCCTCGTGGTGCTCCTaGATGTGCTTCTTCATGCCG +
Preference number: 3 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQASSWCS*MCFFMP
Trigger: CGGCATGAAGAAGCACATCAAGGAGCACCACGAGGA...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR TCA 72 bp GCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGCACTGGAACCCACAGA +
Preference number: 3 (lower is better)
Translates to: AQSQPCVWSCGT*GMPAACTGTHR
Trigger: TCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR TCA 72 bp TCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTaGGGTTGTGGGCCTTCTCAAACCGCCGGCCACACT +
Preference number: 3 (lower is better)
Translates to: SVSAGAPWTCVH*GCGPSQTAGHT
Trigger: AGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR GCA 72 bp CTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAACCCACAGACCTCACA +
Preference number: 3 (lower is better)
Translates to: LSLVFGHVVLEG*PLPALEPTDLT
Trigger: TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CCA 72 bp GAATTGACAGCTGCCTGGGCCATGTGCCTGCCTGGCTaGCAATACAACTCGACTATTTCTGCCAGAGCCCCT +
Preference number: 3 (lower is better)
Translates to: ELTAAWAMCLPG*QYNSTISARAP
Trigger: AGGGGCTCTGGCAGAAATAGTCGAGTTGTATTGCCAGCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp CGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTaGGAAGCTCCTCCCTCTCACAACGAAGCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: RPCSPGKDTCRW*EAPPSHNEASS
Trigger: AGAAGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp ACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCTCACAACGAAGCTTCT +
Preference number: 3 (lower is better)
Translates to: TRPCSPGKDTCR*WEAPPSHNEAS
Trigger: AGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp ACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCA +
Preference number: 3 (lower is better)
Translates to: TRPCSPGKDTCR*WEAPPCNEEHA
Trigger: TGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR-3UTR CAA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCGCAGAGGAAGGCTACTaGAGCCGGACACCAAGCCCG +
Preference number: 3 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCAEEGY*SRTPSP
Trigger: CGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGC...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
3UTR GCA 72 bp GGTTGGTCTCCTGCGGTTTACAGAGCACCACAGACCTaGCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCG +
Preference number: 3 (lower is better)
Translates to: GWSPAVYRAPQT*QRLSTFVQQSS
Trigger: CGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGTGCTCTGTAAACCGCAGGAGACCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGCTGCCTGCACTGGAAC +
Preference number: 3 (lower is better)
Translates to: KSSSVSALCLVM*YLRDARCLHWN
Trigger: GTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp CAGCCGGAGGCTCCTTCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGCGAGTCACTCAGCGTTaGCGGGAAAATAAACCACTG +
Preference number: 3 (lower is better)
Translates to: QPEAPSAKECSGTACRLWRVTQR*RENKPL
Trigger: CAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCG...CCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp GGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCTTTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: GLCQRVHHGHVYIEVVGLSRMSH*VDEKVL
Trigger: AAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA...AAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR GCA 72 bp TCCCCAGCACTGATAATAGGCAGAGATGTCCAGAGTTaGCTGAGCCACTTCTTGGTGTTGCAGACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SPALIIGRDVQS*LSHFLVLQTSG
Trigger: GCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCTGCCTATTATCAGTGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 72 bp TTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAGACCTCACACTGCAAA +
Preference number: 3 (lower is better)
Translates to: LCLVMWYLRDAR*LHWNPQTSHCK
Trigger: TTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp ATGAGAATTGACAGCTGCCTGGGCCATGTGCCTGCCTaGCTGGCAATACAACTCGACTATTTCTGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: MRIDSCLGHVPA*LAIQLDYFCQS
Trigger: GCTCTGGCAGAAATAGTCGAGTTGTATTGCCAGCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp ATAATTTACTGGCTCACTGGTCAACCCCAGGACCAATaGGCCTATCATGGGGACTGCCTCTCTCTGCACCAC +
Preference number: 3 (lower is better)
Translates to: IIYWLTGQPQDQ*AYHGDCLSLHH
Trigger: GTGGTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp TTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTaGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTG +
Preference number: 3 (lower is better)
Translates to: FNVLFEDVVQQP*CGCSKSLASYL
Trigger: CAGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp CCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAATTCTTGGTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: PSHNEASSSIRA*VPASSEFLVLQ
Trigger: CTGAAGAACCAAGAATTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp TCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: SHCKGLAPECRI*WTRRCFRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGCGAGTCACTCAGCGTTaGCGGGAAAATAAACCACTG +
Preference number: 3 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQRVTQR*RENKPL
Trigger: CAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCG...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGTGCCTGAGCCACTTCTaGGTGTTGCAGACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSCLSHF*VLQTSG
Trigger: GCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCA...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCGGCCATTCTCAGGGTaGGTCTCCTGCGGTTTACAG +
Preference number: 3 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQRPFSG*VSCGLQ
Trigger: CTGTAAACCGCAGGAGACCAACCCTGAGAATGGCCG...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp TTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCGGTTCTTCAGACTTCTaGGCTTCTTTGCTTTCACTC +
Preference number: 3 (lower is better)
Translates to: LRLWAFSNRRPHWSQAKSGSSDF*ASLLSL
Trigger: GAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACC...GGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR TCA 72 bp AAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTaGAGCTGGTCCAGCTCTTCGTGGCTGGGGATACAA +
Preference number: 3 (lower is better)
Translates to: KRPSCMLLWTCT*SWSSSSWLGIQ
Trigger: TTGTATCCCCAGCCACGAAGAGCTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR GCA 72 bp TTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTaGTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCA +
Preference number: 3 (lower is better)
Translates to: LAPECRIWWTRR*FRCLKVCPHSS
Trigger: TGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp CTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTaGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCC +
Preference number: 3 (lower is better)
Translates to: LWAFLLMSYLRT*CSSLGVGARSP
Trigger: GGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp ACCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAATTCTTGGTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: TSHNEASSSIRA*VPASSEFLVLQ
Trigger: CTGAAGAACCAAGAATTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR-3UTR CAA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTAGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGG +
Preference number: 3 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVVSALC*VMWYLR
Trigger: CCTCAAGTACCACATGACCAAACACAAGGCTGAGAC...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp GGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGCTTCTGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGG +
Preference number: 3 (lower is better)
Translates to: GKDTCRWWEAPPSHNEASVSALC*VMWYLR
Trigger: CCTCAAGTACCACATGACCAAACACAAGGCTGAGAC...AGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGAT +
Preference number: 3 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVPLLEG*STFVTD
Trigger: ATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGG...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR-3UTR CAA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCTCACACTGCAAAGGCTaGGCTCCCGAATGTCGCATT +
Preference number: 3 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCSHCKG*APECRI
Trigger: AATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGA...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR CCA 72 bp TCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATaGGGGACACACCAGCCCTGTTTCTGTATGTCTTCT +
Preference number: 3 (lower is better)
Translates to: SAKECSGTACRL*GTHQPCFCMSS
Trigger: AGAAGACATACAGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTAAAGGCTTTCCACGTTaGTGCAGCAATCCTCGAGTG +
Preference number: 3 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLKGFPR*CSNPRV
Trigger: CACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTT...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGAT +
Preference number: 3 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCPLLEG*STFVTD
Trigger: ATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGG...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR TCA 72 bp AGAAGAGGAAGATATCCTGGCTGGCACTCTTTCAGTTaGCAGAGAGTGGTAAGAAACACGCTGCTGAGGCAC +
Preference number: 3 (lower is better)
Translates to: RRGRYPGWHSFS*QRVVRNTLLRH
Trigger: GTGCCTCAGCAGCGTGTTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCAGCCAGGATATCTTCCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR TCA 72 bp GTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTaGAGGTTTGTCCACATTCGTCACAGATATAGTTCC +
Preference number: 3 (lower is better)
Translates to: VAFGGREGASAA*RFVHIRHRYSS
Trigger: GGAACTATATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
3UTR GCA 72 bp AAAGCTCGTCTTTTTCTGCTGCAGTTAATACCTCGGTaGCCGAAAAAGAGCTTCTCACACGTGGCAGAGGTA +
Preference number: 3 (lower is better)
Translates to: KARLFLLQLIPR*PKKSFSHVAEV
Trigger: TACCTCTGCCACGTGTGAGAAGCTCTTTTTCGGGCACCGAGGTATTAACTGCAGCAGAAAAAGACGAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR-3UTR CAA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGATCATGAAAACCTTGTaGCAGCCAGGGTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: CCTKKWITNLLDCFSGERIMKTL*QPGWGQ
Trigger: CTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGAT...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568295.5
3UTR CCA 72 bp GCAATCCTCGAGTGTTTAGAGAAGAGGAAGATATCCTaGCTGGCACTCTTTCAGTTGACAGAGAGTGGTAAG +
Preference number: 3 (lower is better)
Translates to: AILECLEKRKIS*LALFQLTESGK
Trigger: CTTACCACTCTCTGTCAACTGAAAGAGTGCCAGCCAGGATATCTTCCTCTTCTCTAAACACTCGAGGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR TCA 72 bp GAGGCATCTTGCAAATGGTTAAGAACGAGCCCTCCTTaGGGTTCCTTGCTAAGTAAGTTTATAAGCTCCATT +
Preference number: 3 (lower is better)
Translates to: EASCKWLRTSPP*GSLLSKFISSI
Trigger: AATGGAGCTTATAAACTTACTTAGCAAGGAACCTCAAGGAGGGCTCGTTCTTAACCATTTGCAAGATGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CCA 72 bp ACAAGCATAACATGGAGCTCTTGTTGCACTAAAAAGTaGATTACAAATCTCCTCGACTGCTTTAGTGGGGAA +
Preference number: 3 (lower is better)
Translates to: TSITWSSCCTKK*ITNLLDCFSGE
Trigger: TTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCATGTTATGCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
3UTR GCA 72 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAATCAATTATTTATGAAC +
Preference number: 3 (lower is better)
Translates to: CCTKKWITNLLD*FSGERNQLFMN
Trigger: GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR GCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGGGCGAGAGCCCGGCCTaGTCCGTGGGAGACGGAGGC +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKGESPA*SVGDGG
Trigger: GCCTCCGTCTCCCACGGAGCAGGCCGGGCTCTCGCC...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000568064.5
CDS-3UTR CCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTTCCACCCTCGGTGCTaGGGCAGCCGTGGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPFHPRC*GSRGAV
Trigger: GACGGCGCCACGGCTGCCCCAGCACCGAGGGTGGAA...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCACAACGGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PAPTGRASLALQASPLTTVGSPT*APPRRC
Trigger: ACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCAC...CGTTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR GCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCCTGGCCGCATGTCCATaGACCCACCCCACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPLAACP*THPTKP
Trigger: CGGCTTGGTGGGGTGGGTGCATGGACATGCGGCCAG...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCGCGGTTAGACGCCCATaGCAACTCCGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPAVRRP*QLREGP
Trigger: GGGCCCCTCACGGAGTTGCCATGGGCGTCTAACCGC...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289816.9
CDS-3UTR CCA 90 bp CGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGGCAGGGCCCCGCAGCTaGCCGCATGTCCATGCACCC +
Preference number: 4 (lower is better)
Translates to: RPQVGSGFTAWPSVVTEGAGPRS*PHVHAP
Trigger: GGGTGCATGGACATGCGGCCAGCTGCGGGGCCCTGC...CCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGTTCCACCCTCGGTGCTaGGGCAGCCGTGGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: RPQVGSGFTAWPSVVTEGFHPRC*GSRGAV
Trigger: GACGGCGCCACGGCTGCCCCAGCACCGAGGGTGGAA...CCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCCGCCTGGCCCTCTGTaGTCACAGAGGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: WVRASPPGPLWSQRGSVAPPGPL*SQRGSV
Trigger: CACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGG...GGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGCAGCCGGGGAGGCGTTaGCCCTCTGCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: VRASPPGPLWSQRGSVAQQPGRR*PSAGRT
Trigger: AGTCCTTCCTGCAGAGGGTCAACGCCTCCCCGGCTG...CTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGGTGGGCGGCATGGGCTaGGGACCTGCTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKVGGMG*GPAPLS
Trigger: TGAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCAC...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTTGAACTGGCCTCAGTaGTCCGCCGACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPLNWPQ*SADLGL
Trigger: GAGGCCGAGGTCGGCGGATCACTGAGGCCAGTTCAA...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCGCGCCCTCTCGGAGATaGTGCGCAGGCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: WVRASPPGPLWSQRGSVAAPSRR*CAGFSR
Trigger: CCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGC...GGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCGGGTTCCACCCTCGGTaGTGGGGCAGCCGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASGFHPR*WGSRGA
Trigger: GGCGCCACGGCTGCCCCAGCACCGAGGGTGGAACCC...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCCCGACGGGTTCCACCCTCGGTaGTGGGGCAGCCGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: WWEAPPCNEEHAWSPGPDGFHPR*WGSRGA
Trigger: GGCGCCACGGCTGCCCCAGCACCGAGGGTGGAACCC...GTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR GCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGGCTGATCGTGGGGACTaGGACCCAGAGGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKADRGD*DPEVSA
Trigger: GGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGC...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGGCAGAATCCCGCGGGTaGTGCCCGGCCCGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQAESRG*CPARGS
Trigger: GGAACCTCGGGCCGGGCAGCACCCGCGGGATTCTGC...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568295.5
CDS-3UTR CCA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACATTCCACCCTCGGTGCTaGGGCAGCCGTGGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTFHPRC*GSRGAV
Trigger: GACGGCGCCACGGCTGCCCCAGCACCGAGGGTGGAA...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCAGGGCCACATCCGTGCTaGGCAGGGTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: EPRPRQAGRASRCRHHLSGPHPC*AGSWSQ
Trigger: CTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCC...TGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTCGGTGGCCCAGGTGGTaGTTCCGCCTCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLRWPRW*FRLQGQ
Trigger: CTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCG...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AATGAAGAGCATGCATGGAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTAGGGGCAGGCTTGGCTaGGGTGGGAAGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: NEEHAWSPGPDRQGEPRVRGRLG*GGKPDL
Trigger: CAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCT...AACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR TCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTACTGCGACCCAGAGGTaGGCGCCGCCCTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLTATQR*APPSRA
Trigger: TGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGT...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCGAGCACGCGCTCCTCTaGGGATGGCCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: WVRASPPGPLWSQRGSVAEHALL*GWPLHA
Trigger: AGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTC...GGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPLRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGGGCGACAGTGACCCATaGCGAGAGCCCGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQGDSDP*REPGLL
Trigger: GAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCC...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKCWAGS*SQPQLG
Trigger: CCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCA...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AATGAAGAGCATGCATGGAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTCAGGCTTGGCTGAGGTaGGAAGCCCGACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: NEEHAWSPGPDRQGEPRVQAWLR*EARPGP
Trigger: GGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTG...AACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp GGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: GSGFTAWPSVVTEGLGGPTAVLR*VRASPP
Trigger: AGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT...TGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGGGGGACAGAGGCGGATGGCCTCTCCATaGTCGCTCCAGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GCPLPALEPTDLTPGGQRRMASP*SLQAPS
Trigger: AGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCG...CCTCTGTCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR GCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGCTGGCCGCATGTCCATaGACCCACCCCACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQLAACP*THPTKP
Trigger: CGGCTTGGTGGGGTGGGTGCATGGACATGCGGCCAG...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACACCTCCGACCCTCCCATaGGGGTGCACACGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTPPTLP*GCTRRV
Trigger: CACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGG...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCACACCAAGCAGGCGCTaGAAGTCCCGTACGAGCACG +
Preference number: 4 (lower is better)
Translates to: WVRASPPGPLWSQRGSVATPSRR*KSRTST
Trigger: CGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGT...GGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCACAAACGGAGACAAGGTaGGGTCCTGGCGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: GSGFTAWPSVVTEGLGGPQTETR*GPGGQP
Trigger: TGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTG...TGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCACAACGAAGCTTCTTCCACCCTCGGTGCTaGGGCAGCCGTGGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: RQAGRASRCRHHLSQRSFFHPRC*GSRGAV
Trigger: GACGGCGCCACGGCTGCCCCAGCACCGAGGGTGGAA...GAAGCTTCGTTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp CGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGGCAAAGGGGCAGGCTTaGCTGAGGTGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RPQVGSGFTAWPSVVTEGAKGQA*LRWEAR
Trigger: TCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGC...CCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGGGGGACAGAGGCTCACCCAACTGCCCTaGGGCCCTGCAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GCPLPALEPTDLTPGGQRLTQLP*GPAKGQ
Trigger: CTGCCCCTTTGCAGGGCCCCAGGGCAGTTGGGTGAG...CCTCTGTCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp GAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCATCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: EPRPRQAGRASRCRHHLSSSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...TGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp GGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCGGTGGCCCAGGTGGTaGTTCCGCCTCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GMPAACTGTHRPHTAKAWRWPRW*FRLQGQ
Trigger: CTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCG...CCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCAGCTCGGTGGCCCAGGTaGTGGTTCCGCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRSRTSSWCSLMCFFMPSARWPR*WFRLQG
Trigger: CCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGC...TGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACAAGGGGCAGGCTTGGCTaGGGTGGGAAGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: LLHAVSASVHGRAALVRTRGRLG*GGKPDL
Trigger: CAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCT...TGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCTCACAGCTGCTGGCTaGTCGTGGGGACTGCGACCC +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLLTAAG*SWGLRP
Trigger: GGGTCGCAGTCCCCACGATCAGCCAGCAGCTGTGAG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGGGCGAGAGCCCGGCCTaGTCCGTGGGAGACGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQGESPA*SVGDGG
Trigger: GCCTCCGTCTCCCACGGAGCAGGCCGGGCTCTCGCC...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000568064.5
CDS-3UTR GCA 90 bp TCACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACGAGCACGCGCTCCTCTaGGGATGGCCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: SLPSSGGFGLHRLALCGHEHALL*GWPLHA
Trigger: AGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTC...GTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACACTGGGCACCGACCTTTaGACAAGGCTTCCGGCGACC +
Preference number: 4 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTLGTDL*TRLPAT
Trigger: GGTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAG...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGACTGGGCACCGACCTTTaGACAAGGCTTCCGGCGACC +
Preference number: 4 (lower is better)
Translates to: LPSSGGFGLHRLALCGHRLGTDL*TRLPAT
Trigger: GGTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAG...TCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCACCCCACCAAGCCGTaGAGGCACTGGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLHPTKP*RHWGLD
Trigger: ATCCAGCCCCCAGTGCCTGCACGGCTTGGTGGGGTG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGGGTTCCACCCTCGGTaGTGGGGCAGCCGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LKPPATLVTGKVQLSLSLGFHPR*WGSRGA
Trigger: GGCGCCACGGCTGCCCCAGCACCGAGGGTGGAACCC...AAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACGGGTTCCACCCTCGGTaGTGGGGCAGCCGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHGFHPR*WGSRGA
Trigger: GGCGCCACGGCTGCCCCAGCACCGAGGGTGGAACCC...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGCTCCTCTCTCACAGCTaGTGGCTGATCGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKLLSHS*WLIVGT
Trigger: AGTCCCCACGATCAGCCAGCAGCTGTGAGAGAGGAG...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTGACGCTGACCTGGCCGGAGGCTCCTTCTaGCAAAGAATGTTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: EVSAALQSRQQAAPDADLAGGSF*QRMFRH
Trigger: GTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGC...CAGGTCAGCGTCAGGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGGCCTATCATGGGGACTaGCTCTCTCTGCACCACACC +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKAYHGD*LSLHHT
Trigger: GGTGTGGTGCAGAGAGAGGCAGTCCCCATGATAGGC...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGGGGGCAGGGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCCAGCCCCACACGACCTaGATGACGCCGCAGTACTCG +
Preference number: 4 (lower is better)
Translates to: WGQGRSRTSSWCSLMCFFQPHTT*MTPQYS
Trigger: CGAGTACTGCGGCGTCATCCAGGTCGTGTGGGGCTG...GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCCCTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGCGTCTCTTTGTCCCATaGCCACTTGACTGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKRLFVP*PLDCQR
Trigger: GCGCTGGCAGTCAAGTGGCCATGGGACAAAGAGACG...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGGGGGCAGGGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: WGQGRSRTSSWCSLMCFFCWAGS*SQPQLG
Trigger: CCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCA...GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCCCTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGGGGGACAGAGGGCAAAGGGGCAGGCTTaGCTGAGGTGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: GCPLPALEPTDLTPGGQRAKGQA*LRWEAR
Trigger: TCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGC...CCTCTGTCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGCAAAGGGGCAGGCTTaGCTGAGGTGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTAKGQA*LRWEAR
Trigger: TCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGC...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTGACGCTGACCTGTCCCGGACCTCCTCGTaGTGCTCCTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: EVSAALQSRQQAAPDADLSRTSS*CSLMCF
Trigger: GAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGA...CAGGTCAGCGTCAGGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCCGGTGGCCCAGGTGGTaGTTCCGCCTCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WAFSNRRPHWSQAKSSSVRWPRW*FRLQGQ
Trigger: CTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCG...GACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGGCTCGGTGGCCCAGGTaGTGGTTCCGCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASVHGRAALVRTLVDGGKARWPR*WFRLQG
Trigger: CCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGC...CTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCCGCCTGGCCCTCTGTaGTCACAGAGGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASPPGPL*SQRGSV
Trigger: CACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCGAGGACAGTGTCCTCTaGAGGTGGGGCAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: WAFSNRRPHWSQAKSSSVEDSVL*RWGRAP
Trigger: CGGGGCCCTGCCCCACCTTCAGAGGACACTGTCCTC...GACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGATGTCCCATGGCCACTTaGCTGCCAGCGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPSSGGFGLHRLALCGHRCPMAT*LPAHCP
Trigger: TGGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACA...TCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGTTGAACTGGCCTCAGTaGTCCGCCGACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVLNWPQ*SADLGL
Trigger: GAGGCCGAGGTCGGCGGATCACTGAGGCCAGTTCAA...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGAGGCGTTGACCCTCTaGAGGAAGGACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VRASPPGPLWSQRGSVAQEALTL*RKDLRR
Trigger: CCTTCTCAAGTCCTTCCTGCAGAGGGTCAACGCCTC...CTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGTGGTGAGGCGTTGACCCTCTaGAGGAAGGACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GFTAWPSVVTEGLGGPGGEALTL*RKDLRR
Trigger: CCTTCTCAAGTCCTTCCTGCAGAGGGTCAACGCCTC...ACCACCTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGCTGGGCACCGACCTTTaGACAAGGCTTCCGGCGACC +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVLGTDL*TRLPAT
Trigger: GGTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAG...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGGGTTCCACCCTCGGTaGTGGGGCAGCCGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPGFHPR*WGSRGA
Trigger: GGCGCCACGGCTGCCCCAGCACCGAGGGTGGAACCC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCGGGTTCCACCCTCGGTaGTGGGGCAGCCGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GHVYIEVVGLLKPPATLVGFHPR*WGSRGA
Trigger: GGCGCCACGGCTGCCCCAGCACCGAGGGTGGAACCC...GACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCGCTGGGCCACATCCGTaGTGGGCAGGGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASAGPHP*WAGSWS
Trigger: AGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGC...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTTGATGTGCTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGACTGCCCTGGGGCCCTaGAAAGGGGCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LDVLLHAVSASVHGRAALTALGP*KGAGLA
Trigger: AGCCAAGCCTGCCCCTTTGCAGGGCCCCAGGGCAGT...CAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAGCACATCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGATTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: LPSSGGFGLHRLALCGHRLRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...TCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCCTCCGACCCTCCCATaGGGGTGCACACGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASPPTLP*GCTRRV
Trigger: CACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGGGGACTGCCTCTCTCTaGACCACACCCACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVGTASL*TTPTLL
Trigger: CAGGAGGGTGGGTGTGGTGCAGAGAGAGGCAGTCCC...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGCAGAATCCCGCGGGTaGTGCCCGGCCCGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHAESRG*CPARGS
Trigger: GGAACCTCGGGCCGGGCAGCACCCGCGGGATTCTGC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443381.7
CDS-3UTR CCA 90 bp GGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTGGGGGACAGAGGCAAACGGAGACAAGGTaGGGTCCTGGCGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: GCPLPALEPTDLTPGGQRQTETR*GPGGQP
Trigger: TGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTG...CCTCTGTCCCCCAGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACTTCCACCCTCGGTGCTaGGGCAGCCGTGGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHFHPRC*GSRGAV
Trigger: GACGGCGCCACGGCTGCCCCAGCACCGAGGGTGGAA...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCACAACGAAGCTTCCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RQAGRASRCRHHLSQRSFLSEGG*ATSVLG
Trigger: GCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAG...GAAGCTTCGTTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp TCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCRQRLGTRPCSPGKDTCLSEGG*ATSVLG
Trigger: GCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAG...ACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTCTCACCCAACTGCCCTaGGGCCCTGCAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SCRQRLGTRPCSPGKDTCLTQLP*GPAKGQ
Trigger: CTGCCCCTTTGCAGGGCCCCAGGGCAGTTGGGTGAG...ACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGGCCCGCTGCCTGCACTaGAACCCACAGACCTCACAC +
Preference number: 4 (lower is better)
Translates to: PAACTGTHRPHTAKAWLPARCLH*NPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC...CGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCGCTCGGTGGCCCAGGTaGTGGTTCCGCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRLWAFSNRRPHWSQAKSARWPR*WFRLQG
Trigger: CCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGC...GGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGGCTCCTCCTCCGTGTaGCCCCGGATCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASGSSSV*PRISTP
Trigger: TGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAACTGGGGGCTGGATGTaGTCAGATCCACCAGACACG +
Preference number: 4 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTTGGWM*SDPPDT
Trigger: CGTGTCTGGTGGATCTGATCACATCCAGCCCCCAGT...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGCAGGGCCTTGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACACCCACACGACCTGGATaGCGCCGCAGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GRALSWVCVSGCTMDMCTPTRPG*RRSTRR
Trigger: CCTCCGAGTACTGCGGCGTCATCCAGGTCGTGTGGG...TGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGACAAGGCCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTAGGGGCAGGCTTGGCTaGGGTGGGAAGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: QTAGHTGHRQSPAQSQPCRGRLG*GGKPDL
Trigger: CAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCT...ACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASWSCGT*GMPAAC
Trigger: GCAGGCAGCGGGCATCCCTCAAGTACCACATGACCA...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACCCCTCCCCTGTGGTCTaGGGCCTAGTGGGCGGCATG +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHPSPVV*GLVGGM
Trigger: CATGCCGCCCACTAGGCCTCAGACCACAGGGGAGGG...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCGCCATGTGGGGGACATaGGAATTGACAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLAMWGT*ELTAAW
Trigger: CCAGGCAGCTGTCAATTCTCATGTCCCCCACATGGC...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AATGAAGAGCATGCATGGAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTAGCTCCTCCCTGCAATaGAGAGCATGCATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NEEHAWSPGPDRQGEPRVSSSLQ*RACMEP
Trigger: GGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCT...AACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR GCA 90 bp GGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGGAGCACGCGCTCCTCTaGGGATGGCCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: GMPAACTGTHRPHTAKAWEHALL*GWPLHA
Trigger: AGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTC...CCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGGGGCGTGGCAGCTCTTaGAGACAAACGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQGRGSS*RQTETR
Trigger: CCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCC...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCTGGCCGCATGTCCATaGACCCACCCCACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: DARCLHWNPQTSHCKGLALAACP*THPTKP
Trigger: CGGCTTGGTGGGGTGGGTGCATGGACATGCGGCCAG...AGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGACTGCCCTGGGGCCCTaGAAAGGGGCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LEGCPLPALEPTDLTLQRTALGP*KGAGLA
Trigger: AGCCAAGCCTGCCCCTTTGCAGGGCCCCAGGGCAGT...CCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGTGGTGCTCCTTGATGTaGTTCTTCATGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKWCSLM*FFMPSA
Trigger: CGCTGACGGCATGAAGAAGCACATCAAGGAGCACCA...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCTGGTGCTCCTTGATGTaGTTCTTCATGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: WVRASPPGPLWSQRGSVAWCSLM*FFMPSA
Trigger: CGCTGACGGCATGAAGAAGCACATCAAGGAGCACCA...GGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPLRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGTGTCTGTGTCAGCGGGTaGACCATGGACATGTGTACA +
Preference number: 4 (lower is better)
Translates to: SGFTAWPSVVTEGLGGPGVCVSG*TMDMCT
Trigger: TGTACACATGTCCATGGTGCACCCGCTGACACAGAC...ACCTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCCATGGGCTGAGGACCTaGTCCTCTCTCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLHGLRT*SSLTAA
Trigger: AGCAGCTGTGAGAGAGGAGCAGGTCCTCAGCCCATG...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTTGGGCCATGTGGGGGGCGACAGTGACCCATaGCGAGAGCCCGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLTRGRGNVKMPTLGHVGGDSDP*REPGLL
Trigger: GAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCC...CCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCACACCAAGCAGGCGCTaGAAGTCCCGTACGAGCACG +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLTPSRR*KSRTST
Trigger: CGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGT...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGCAAACGGAGACAAGGTaGGGTCCTGGCGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVQTETR*GPGGQP
Trigger: TGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTG...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGCCCCTGTTGGGGGCTaGGCACCGACCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASAPVGG*APTFAQ
Trigger: TTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGC...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTGACGCTGACCTGCCTTGCAGCTGGAGCTaGTATCCATGGTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: EVSAALQSRQQAAPDADLPCSWS*YPWCSR
Trigger: ACGACTACACCATGGATACCAGCTCCAGCTGCAAGG...CAGGTCAGCGTCAGGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTGGGCCACATCCGTGCTaGGCAGGGTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SCRQRLGTRPCSPGKDTCGPHPC*AGSWSQ
Trigger: CTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCC...ACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPVGSPT*APPRRC
Trigger: ACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCAC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: VSALCLVMWYLRDARCLHVGSPT*APPRRC
Trigger: ACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCAC...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LGLCQRVHHGHVYIEVVGVGSPT*APPRRC
Trigger: ACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCAC...GCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACAGGCTTGGCTGAGGTaGGAAGCCCGACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTQAWLR*EARPGP
Trigger: GGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTG...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGTGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SGFTAWPSVVTEGLGGPGECRIW*TRRCFR
Trigger: GCGGAAGCACCTTCTCGTCCACCAAATGCGACATTC...ACCTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVNRRPH*SQAKSS
Trigger: GCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTT...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCTCTCTCACAGCTGCTaGCTGATCGTGGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLLSHSC*LIVGTA
Trigger: CGCAGTCCCCACGATCAGCCAGCAGCTGTGAGAGAG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGCCCCGGCCCCGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCAGACACTTGTAGATGGTaGGAAGCTCCTCCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: EPRPRQAGRASRCRHHLSDTCRW*EAPPCN
Trigger: ATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTC...TGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGCCGGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGATCCTGCGGACCTTaGCTTTCCACTCCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQRSCGP*LSTPLA
Trigger: AGCGAGCGGAGTGGAAAGCCAAGGTCCGCAGGATCT...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR TCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAACCCATGGCAACTCCGTaGGGGGCCCTTCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: HAAEAQMRRAALFRGILQPMATP*GALLAS
Trigger: GCTGGCGAGAAGGGCCCCTCACGGAGTTGCCATGGG...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289816.9
CDS-3UTR TCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAATGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: HAAEAQMRRAALFRGILQWQRRQ*PMARAR
Trigger: CCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCA...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCGAGGACAGTGTCCTCTaGAGGTGGGGCAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GHVYIEVVGLLKPPATLVEDSVL*RWGRAP
Trigger: CGGGGCCCTGCCCCACCTTCAGAGGACACTGTCCTC...GACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGCCCACACGACCTGGATaGCGCCGCAGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQPTRPG*RRSTRR
Trigger: CCTCCGAGTACTGCGGCGTCATCCAGGTCGTGTGGG...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCCCACACGACCTGGATaGCGCCGCAGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHPTRPG*RRSTRR
Trigger: CCTCCGAGTACTGCGGCGTCATCCAGGTCGTGTGGG...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACCTACCCTGGGAGGTCTaGGGGGCATCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHLPWEV*GASPGF
Trigger: GAACCCTGGGGATGCCCCTCAGACCTCCCAGGGTAG...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTAGGGGCAGGCTTGGCTaGGGTGGGAAGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGRGRLG*GGKPDL
Trigger: CAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCT...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TCCTTGATGTGCTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLMCFFMPSAPRYTAVQPWSCGT*GMPAAC
Trigger: GCAGGCAGCGGGCATCCCTCAAGTACCACATGACCA...GGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAGCACATCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGGTGGGCGGCATGGGCTaGGGACCTGCTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQVGGMG*GPAPLS
Trigger: TGAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCAC...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCGTGTTTGCGGAAGTGTaGGTGAGAACTCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASVFAEV*VRTPRP
Trigger: CGGCCTGGGAGTTCTCACTCACACTTCCGCAAACAC...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGCTTCCAAAATCCGAGTaGCGGGCAGGTCCGTGCGTT +
Preference number: 4 (lower is better)
Translates to: PAACTGTHRPHTAKAWLPLPKSE*RAGPCV
Trigger: AACGCACGGACCTGCCCGTCACTCGGATTTTGGAAG...CGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR GCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGGCGCCCTCTCGGAGATaGTGCGCAGGCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQAPSRR*CAGFSR
Trigger: CCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGC...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTTGCTTCTCACCCAACTaGCCTGGGGCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASCFSPN*PGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCA...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTTGCTTCTCACCCAACTaGCCTGGGGCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SCRQRLGTRPCSPGKDTCCFSPN*PGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCA...ACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGATGCTTCTCACCCAACTaGCCTGGGGCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PLPALEPTDLTLQRLGSRCFSPN*PGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCA...TCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACT +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASLGTRP*SPGKDT
Trigger: AGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGACGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPSSGGFGLHRLALCGHRRTSSW*SLMCFF
Trigger: GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCG...TCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGACGGGACCTGCCACTaGACACCAGCCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPDGTCH*TPAQLP
Trigger: CGGGAGCTGGGCTGGTGTGCAGTGGCAGGTCCCGTC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTCAACTCGACTATTTCTaGCAGAGCCCCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLQLDYF*QSPSPV
Trigger: CACAGGGGAGGGGCTCTGGCAGAAATAGTCGAGTTG...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCATCAGCACACCAGGCTaGTGCCTTTCGCTTTTTACA +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPISTPG*CLSLFT
Trigger: TGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGAT...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTCTGCTGAGGCACAAATaGGGAGGGCCGCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLLLRHK*GGPLFS
Trigger: TGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAG...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCCTGCTGAGGCACAAATaGGGAGGGCCGCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLLLRHK*GGPLFS
Trigger: TGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAG...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCGGCTTTCCACGTTTGTaGAGCAATCCTCGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPGFPRL*SNPRVF
Trigger: AAACACTCGAGGATTGCTGCACAAACGTGGAAAGCC...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCGCTCGCTGAGCCGGTaGATCACAGCCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHRSLSR*ITAWAP
Trigger: TGGAGCCCAGGCTGTGATGCACCGGCTCAGCGAGCG...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR CCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGGCAGGGCCCCGCAGCTaGCCGCATGTCCATGCACCC +
Preference number: 4 (lower is better)
Translates to: QLSLSLVFGHVVLEGCPLAGPRS*PHVHAP
Trigger: GGGTGCATGGACATGCGGCCAGCTGCGGGGCCCTGC...CAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTCAGCCCCACACGACCTaGATGACGCCGCAGTACTCG +
Preference number: 4 (lower is better)
Translates to: VVLEGCPLPALEPTDLTPQPHTT*MTPQYS
Trigger: CGAGTACTGCGGCGTCATCCAGGTCGTGTGGGGCTG...AGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTTCCACCCTCGGTGCTaGGGCAGCCGTGGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: SSSVSALCLVMWYLRDARFHPRC*GSRGAV
Trigger: GACGGCGCCACGGCTGCCCCAGCACCGAGGGTGGAA...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLCWAGS*SQPQLG
Trigger: CCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCA...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCGGGCCACATCCGTGCTaGGCAGGGTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLGPHPC*AGSWSQ
Trigger: CTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCC...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VYIEVVGLLKPPATLVTGLSEGG*ATSVLG
Trigger: GCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAG...GCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACAGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HHGHVYIEVVGLLKPPATVGSPT*APPRRC
Trigger: ACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCAC...TGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASSSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTCGGTGGCCCAGGTGGTaGTTCCGCCTCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSLSLVFGHVVLEGCPLPRWPRW*FRLQGQ
Trigger: CTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCG...AGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACCCGCCTGGCCCTCTGTaGTCACAGAGGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VSALCLVMWYLRDARCLHPPGPL*SQRGSV
Trigger: CACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGG...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGGCTCCTCCTCCGTGTaGCCCCGGATCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHGSSSV*PRISTP
Trigger: TGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCCCAATGGGCCTATCATaGGGACTGCCTCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLPMGLS*GLPLSA
Trigger: TGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGG...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCACGAGGGCCACAGCCCTaGGAGGGGGTCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQARGPQP*EGVLTH
Trigger: GTGAGTCAGGACCCCCTCCCAGGGCTGTGGCCCTCG...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR TCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACACCCATGGCAACTCCGTaGGGGGCCCTTCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTPMATP*GALLAS
Trigger: GCTGGCGAGAAGGGCCCCTCACGGAGTTGCCATGGG...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR TCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACATGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTWQRRQ*PMARAR
Trigger: CCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCA...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCAGCCGGGGAGGCGTTaGCCCTCTGCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: LGLCQRVHHGHVYIEVVGQPGRR*PSAGRT
Trigger: AGTCCTTCCTGCAGAGGGTCAACGCCTCCCCGGCTG...GCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACCAGCCGGGGAGGCGTTaGCCCTCTGCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: VSALCLVMWYLRDARCLHQPGRR*PSAGRT
Trigger: AGTCCTTCCTGCAGAGGGTCAACGCCTCCCCGGCTG...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCAACTGGGGGCTGGATGTaGTCAGATCCACCAGACACG +
Preference number: 4 (lower is better)
Translates to: GRSRTSSWCSLMCFFMPSTGGWM*SDPPDT
Trigger: CGTGTCTGGTGGATCTGATCACATCCAGCCCCCAGT...TGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGGAGGACAGTGTCCTCTaGAGGTGGGGCAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQEDSVL*RWGRAP
Trigger: CGGGGCCCTGCCCCACCTTCAGAGGACACTGTCCTC...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GCTCCTCCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTTGTCCCATGGCCACTTaGCTGCCAGCGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: APPSHNEASSSIRAWVPACPMAT*LPAHCP
Trigger: TGGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACA...AGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCCTACCCTGGGAGGTCTaGGGGGCATCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GHVYIEVVGLLKPPATLVLPWEV*GASPGF
Trigger: GAACCCTGGGGATGCCCCTCAGACCTCCCAGGGTAG...GACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GCCCCGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCACAACGAAGCCGATCATCCGAGGTTaGAGATGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: APTGRASLALQASPLTTKPIIRG*RWKLLL
Trigger: GAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGG...CTTCGTTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR TCA 90 bp GCTCCTCCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTGCACCTCTGTGTGGATaGGCTTCACGTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: APPSHNEASSSIRAWVPAAPLCG*ASRGAA
Trigger: TGCAGCGCCACGTGAAGCTCATCCACACAGAGGTGC...AGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCAGAGGAAGGCTACTTaGGCCGGACACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHQRKAT*AGHQAR
Trigger: GCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTG...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGAATCAATTATTTATaGACTGTCCGGCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GSGFTAWPSVVTEGLGGPGINYL*TVRPRV
Trigger: GACTCGGGGCCGGACAGTTCATAAATAATTGATTCC...TGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGGAATCAATTATTTATaGACTGTCCGGCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: VRASPPGPLWSQRGSVAQGINYL*TVRPRV
Trigger: GACTCGGGGCCGGACAGTTCATAAATAATTGATTCC...CTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCCATGGCCACTTGACTaGCAGCGCACTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASPWPLD*QRTVQQ
Trigger: TTGCTGGACAGTGCGCTGGCAGTCAAGTGGCCATGG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAGCTGGGCCACATCCGTaGTGGGCAGGGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTAGPHP*WAGSWS
Trigger: AGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGC...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAACTGCCCTGGGGCCCTaGAAAGGGGCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTTALGP*KGAGLA
Trigger: AGCCAAGCCTGCCCCTTTGCAGGGCCCCAGGGCAGT...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: PLPALEPTDLTLQRLGSRVVLEG*PLPALE
Trigger: TTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC...TCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCGTCTGTGTCAGCGGGTaGACCATGGACATGTGTACA +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLVCVSG*TMDMCT
Trigger: TGTACACATGTCCATGGTGCACCCGCTGACACAGAC...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGCAAGGGTCAGGCAGGTaGAAGGGCCAGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQQGSGR*KGQSHL
Trigger: GAGGTGGGACTGGCCCTTGCACCTGCCTGACCCTTG...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGATCAGCACACCAGGCTaGTGCCTTTCGCTTTTTACA +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKISTPG*CLSLFT
Trigger: TGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGAT...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCGCGGTTAGACGCCCATaGCAACTCCGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GHVYIEVVGLLKPPATLVAVRRP*QLREGP
Trigger: GGGCCCCTCACGGAGTTGCCATGGGCGTCTAACCGC...GACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp GCTCCTCCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTACACCAAGCAGGCGCTaGAAGTCCCGTACGAGCACG +
Preference number: 4 (lower is better)
Translates to: APPSHNEASSSIRAWVPATPSRR*KSRTST
Trigger: CGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGT...AGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGACAAGGTGGGGTCCTaGCGGACAGCCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: LKPPATLVTGKVQLSLSLDKVGS*RTATPS
Trigger: GCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTC...AAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGAAGCCGTGCAGGCACTaGGGGCTGGATGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: QRLGTRPCSPGKDTCRWWKPCRH*GLDVIR
Trigger: TCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTT...CCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGCCTTGCAGCTGGAGCTaGTATCCATGGTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQPCSWS*YPWCSR
Trigger: ACGACTACACCATGGATACCAGCTCCAGCTGCAAGG...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CACTGCGGAGTCCAGGCTGCTAGAGGTGCTCATCCTCACTGCCGTCCTCAGGTGCGTCTCTTTGTCCCATaGCCACTTGACTGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: HCGVQAARGAHPHCRPQVRLFVP*PLDCQR
Trigger: GCGCTGGCAGTCAAGTGGCCATGGGACAAAGAGACG...CACCTGAGGACGGCAGTGAGGATGAGCACCTCTAGCAGCCTGGACTCCGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSVGSPT*APPRRC
Trigger: ACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCAC...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTTGGGCCATGTGGGGGCAAAGGGGCAGGCTTaGCTGAGGTGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LLTRGRGNVKMPTLGHVGAKGQA*LRWEAR
Trigger: TCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGC...CCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VRASPPGPLWSQRGSVAQDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...CTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCGACACTTGTAGATGGTaGGAAGCTCCTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLDTCRW*EAPPSH
Trigger: GTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTC...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTGACACTTGTAGATGGTaGGAAGCTCCTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLDTCRW*EAPPSH
Trigger: GTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTC...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACGACACTTGTAGATGGTaGGAAGCTCCTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SLPSSGGFGLHRLALCGHDTCRW*EAPPSH
Trigger: GTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTC...GTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTTCCCGGACCTCCTCGTaGTGCTCCTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASSRTSS*CSLMCF
Trigger: GAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGA...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTECRIW*TRRCFR
Trigger: GCGGAAGCACCTTCTCGTCCACCAAATGCGACATTC...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCGCTCGGTGGCCCAGGTaGTGGTTCCGCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVARWPR*WFRLQG
Trigger: CCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGC...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGCTCGGTGGCCCAGGTaGTGGTTCCGCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRARWPR*WFRLQG
Trigger: CCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCCTGGGTCCCGCCAGATaGGAAGGGTTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLLGPAR*EGLSVP
Trigger: AGGCACAGACAACCCTTCCCATCTGGCGGGACCCAG...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCAACCCCAGGACCAATaGGCCTATCATGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASQPQDQ*AYHGDC
Trigger: GCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCAAGAGGAAGATATCCTaGCTGGCACTCTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPKRKIS*LALFQL
Trigger: CAACTGAAAGAGTGCCAGCCAGGATATCTTCCTCTT...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGCCGGTCCCGCTTCATaGCAGCGGAGGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTAGPAS*QRRTPA
Trigger: TGCTGGCGTCCTCCGCTGCCATGAAGCGGGACCGGC...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568295.5
CDS-3UTR CCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACGCCCGGCCTGCTCCTTaGACAGCTCAGATCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VSALCLVMWYLRDARCLHARPAP*TAQILR
Trigger: CCGCAGGATCTGAGCTGTCCAAGGAGCAGGCCGGGC...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR CCA 90 bp GGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCAAGCCGTGCAGGCACTaGGGGCCAGACACGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GHVYIEVVGLLKPPATLVKPCRH*GPDTLP
Trigger: AGGGAGCGTGTCTGGCCCCCAGTGCCTGCACGGCTT...GACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR TCA 90 bp CTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTTGGGCCATGTGGGGGCACCTCTGTGTGGATaGGCTTCACGTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLTRGRGNVKMPTLGHVGAPLCG*ASRGAA
Trigger: TGCAGCGCCACGTGAAGCTCATCCACACAGAGGTGC...CCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCGCACCTCTGTGTGGATaGGCTTCACGTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LRLWAFSNRRPHWSQAKSAPLCG*ASRGAA
Trigger: TGCAGCGCCACGTGAAGCTCATCCACACAGAGGTGC...GGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTRPCSPGKDTCRWWEAPWSCGT*GMPAAC
Trigger: GCAGGCAGCGGGCATCCCTCAAGTACCACATGACCA...AGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCAGAGGAAGGCTACTTaGGCCGGACACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LGLCQRVHHGHVYIEVVGQRKAT*AGHQAR
Trigger: GCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTG...GCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCACTGCGACCCAGAGGTaGGCGCCGCCCTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVTATQR*APPSRA
Trigger: TGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGT...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTCTGTGGACATGTACTTaGAGCTGGTCCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPLWTCT*SWSSSS
Trigger: CGAAGAGCTGGACCAGCTTCAAGTACATGTCCACAG...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGCTGTGGACATGTACTTaGAGCTGGTCCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVLWTCT*SWSSSS
Trigger: CGAAGAGCTGGACCAGCTTCAAGTACATGTCCACAG...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAGCCGGAGGCTCCTTCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGAGCACGCGCTCCTCTaGGGATGGCCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: QPEAPSAKECSGTACRLWEHALL*GWPLHA
Trigger: AGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTC...CCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCTGGCCGCATGTCCATaGACCCACCCCACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTLAACP*THPTKP
Trigger: CGGCTTGGTGGGGTGGGTGCATGGACATGCGGCCAG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACCAGCAAGAAGGCCTTaGAGCTGGAGCTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: LLHAVSASVHGRAALVRTPARRP*SWSWYP
Trigger: TGGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGG...TGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGCTGGGCCACATCCGTaGTGGGCAGGGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPAGPHP*WAGSWS
Trigger: AGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAACTGCCCTGGGGCCCTaGAAAGGGGCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTTALGP*KGAGLA
Trigger: AGCCAAGCCTGCCCCTTTGCAGGGCCCCAGGGCAGT...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACATGCTTCTCACCCAACTaGCCTGGGGCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTCFSPN*PGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCA...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCCTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACT +
Preference number: 4 (lower is better)
Translates to: VYIEVVGLLKPPATLVTGLGTRP*SPGKDT
Trigger: AGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG...GCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGGTGGACGAGAAGGTaGTTCCGCTGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLWWTRR*FRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCA...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTTTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: GTRPCSPGKDTCRWWEAPLRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...AGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTGAHPH*RPQVGS
Trigger: CGAACCCACCTGAGGACGGCAGTGAGGATGAGCACC...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCCATGGGCTGAGGACCTaGTCCTCTCTCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLHGLRT*SSLTAA
Trigger: AGCAGCTGTGAGAGAGGAGCAGGTCCTCAGCCCATG...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAACAAGGGTCAGGCAGGTaGAAGGGCCAGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: HAAEAQMRRAALFRGILQQGSGR*KGQSHL
Trigger: GAGGTGGGACTGGCCCTTGCACCTGCCTGACCCTTG...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGTCCCTTGGCATCACCTaGTACCTTTCCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVSLGIT*YLSSSL
Trigger: CAGACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGA...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGGCAGATAAGAAGGTaGGAGGGCCACAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRLWAFSNRRPHWSQAKSRQIRR*EGHSPG
Trigger: CCCAGGGCTGTGGCCCTCGCACCTTCTTATCTGCCT...GGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTGACAAGGTGGGGTCCTaGCGGACAGCCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGDKVGS*RTATPS
Trigger: GCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTC...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACGCCCCTGTTGGGGGCTaGGCACCGACCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: VSALCLVMWYLRDARCLHAPVGG*APTFAQ
Trigger: TTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGC...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTAGCAGGGCCCCGCAGCTaGCCGCATGTCCATGCACCC +
Preference number: 4 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVAGPRS*PHVHAP
Trigger: GGGTGCATGGACATGCGGCCAGCTGCGGGGCCCTGC...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCCTTGCAGCTGGAGCTaGTATCCATGGTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLPCSWS*YPWCSR
Trigger: ACGACTACACCATGGATACCAGCTCCAGCTGCAAGG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTLSEGG*ATSVLG
Trigger: GCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCCAGGCTTGGCTGAGGTaGGAAGCCCGACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVQAWLR*EARPGP
Trigger: GGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTG...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGCAGGCTTGGCTGAGGTaGGAAGCCCGACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQQAWLR*EARPGP
Trigger: GGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTG...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGCTCACCCAACTGCCCTaGGGCCCTGCAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWVCVSGCTMDMCTLRLWLTQLP*GPAKGQ
Trigger: CTGCCCCTTTGCAGGGCCCCAGGGCAGTTGGGTGAG...CCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GCTCCTCCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: APPSHNEASSSIRAWVPASSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...AGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGCAGGGCCTTGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATCCCGGACCTCCTCGTaGTGCTCCTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRALSWVCVSGCTMDMCTSRTSS*CSLMCF
Trigger: GAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGA...TGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGACAAGGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVECRIW*TRRCFR
Trigger: GCGGAAGCACCTTCTCGTCCACCAAATGCGACATTC...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLLCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGCTCCTCCTCCGTGTGGCCCCGGATCAGCACACCAGGCTGCTGCCTTTCGCTTTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: GSSSVWPRISTPGCCLSLLCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...AAGCGAAAGGCAGCAGCCTGGTGTGCTGATCCGGGGCCACACGGAGGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHNRRPH*SQAKSS
Trigger: GCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTT...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGG +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLCTLRL*AFSNRR
Trigger: CCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTTCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPSGFTA*PSVVTE
Trigger: CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: QRLGSRMSHLVDEKVLPLTAVLR*VRASPP
Trigger: AGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT...CAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTAGTTTCACCTCCAGCTaGCAGGAGCCTGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASSFTSS*QEPGAQ
Trigger: TTGAGCTCCAGGCTCCTGCCAGCTGGAGGTGAAACT...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCCCAGCTCTTCGTGGCTaGGGATACAAGCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASPALRG*GYKHSF
Trigger: GAAACTGTGCTTGTATCCCCAGCCACGAAGAGCTGG...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAAGCAGCAGCCTTGGTGTaGGTGCTCGAAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HAAEAQMRRAALFRGILQAAALV*VLEVPG
Trigger: GCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGC...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp ATAGGCAGAGATGTCCAGAGTTGCCTGAGCCACTTCTaGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IGRDVQSCLSHF*VLQTSGWGGSS
Trigger: GGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCTGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTCAGCCGGGGAGGCGTTaGCCCTCTGCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSQPGRR*PSAGRT
Trigger: AGTCCTTCCTGCAGAGGGTCAACGCCTCCCCGGCTG...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGGAGGACAGTGTCCTCTaGAGGTGGGGCAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKEDSVL*RWGRAP
Trigger: CGGGGCCCTGCCCCACCTTCAGAGGACACTGTCCTC...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCACCCACACGACCTGGATaGCGCCGCAGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPPTRPG*RRSTRR
Trigger: CCTCCGAGTACTGCGGCGTCATCCAGGTCGTGTGGG...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGTGTCCCATGGCCACTTaGCTGCCAGCGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QRLGSRMSHLVDEKVLPLCPMAT*LPAHCP
Trigger: TGGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACA...CAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCACTACCCTGGGAGGTCTaGGGGGCATCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPLPWEV*GASPGF
Trigger: GAACCCTGGGGATGCCCCTCAGACCTCCCAGGGTAG...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGCCCTCCCCTGTGGTCTaGGGCCTAGTGGGCGGCATG +
Preference number: 4 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVPSPVV*GLVGGM
Trigger: CATGCCGCCCACTAGGCCTCAGACCACAGGGGAGGG...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTAGAACGAGCCCTCCTTaGGGTTCCTTGCTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPRTSPP*GSLLSK
Trigger: CTTACTTAGCAAGGAACCTCAAGGAGGGCTCGTTCT...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGTGTTTGCGGAAGTGTaGGTGAGAACTCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHVFAEV*VRTPRP
Trigger: CGGCCTGGGAGTTCTCACTCACACTTCCGCAAACAC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGGCGCCCTCTCGGAGATaGTGCGCAGGCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLAPSRR*CAGFSR
Trigger: CCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGC...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGCGGATGGCCTCTCCATaGTCGCTCCAGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQRMASP*SLQAPS
Trigger: AGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCG...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCGGATGGCCTCTCCATaGTCGCTCCAGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLRMASP*SLQAPS
Trigger: AGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCG...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACGGGCGTGGCAGCTCTTaGAGACAAACGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHGRGSS*RQTETR
Trigger: CCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCC...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGCACCCCACCAAGCCGTaGAGGCACTGGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQHPTKP*RHWGLD
Trigger: ATCCAGCCCCCAGTGCCTGCACGGCTTGGTGGGGTG...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCATGGCCACTTGACTaGCAGCGCACTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTPWPLD*QRTVQQ
Trigger: TTGCTGGACAGTGCGCTGGCAGTCAAGTGGCCATGG...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCGCTGGGCCACATCCGTaGTGGGCAGGGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ALVRTLVDGGKLLPAMKSAGPHP*WAGSWS
Trigger: AGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGC...GCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR GCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGCTGGGCCACATCCGTaGTGGGCAGGGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTAGPHP*WAGSWS
Trigger: AGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGC...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: PAACTGTHRPHTAKAWLPVEDGS*FSPNCP
Trigger: AGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAAC...CGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAACTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACT +
Preference number: 4 (lower is better)
Translates to: HAAEAQMRRAALFRGILQLGTRP*SPGKDT
Trigger: AGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGATGGTGCTCCTTGATGTaGTTCTTCATGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: PLPALEPTDLTLQRLGSRWCSLM*FFMPSA
Trigger: CGCTGACGGCATGAAGAAGCACATCAAGGAGCACCA...TCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DARCLHWNPQTSHCKGLARTSSW*SLMCFF
Trigger: GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCG...AGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTTGGTGGACGAGAAGGTaGTTCCGCTGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SCRQRLGTRPCSPGKDTCWWTRR*FRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCA...ACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: MCTLRLWAFSNRRPHWSQGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...CTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: QLSLSLVFGHVVLEGCPLGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...CAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQVVLEG*PLPALE
Trigger: TTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VYIEVVGLLKPPATLVTGVVLEG*PLPALE
Trigger: TTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC...GCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAATCTTCTGACGGGACCTaGCACTGCACACCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HAAEAQMRRAALFRGILQSSDGT*HCTPAQ
Trigger: CTGGGCTGGTGTGCAGTGGCAGGTCCCGTCAGAAGA...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCGGGGTTTCACCATATTaGCAGGCTGGTCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASGVSPY*QAGLEL
Trigger: CAGTTCAAGACCAGCCTGGCAATATGGTGAAACCCC...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGGGGCGAGCCTCGCGTTaGAGGCATCACCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: RAALVRTLVDGGKLLPAMGRASR*RHHLSQ
Trigger: TTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCC...CATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR GCA 90 bp CTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGGGCGAGAGCCCGGCCTaGTCCTTGGACAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LTLQRLGSRMSHLVDEKVGESPA*SLDSSD
Trigger: ATCTGAGCTGTCCAAGGAGCAGGCCGGGCTCTCGCC...CACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR GCA 90 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCACCCCACCAAGCCGTaGAGGCACTGGGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KSSSVSALCLVMWYLRDAHPTKP*RHWGPD
Trigger: GTCTGGCCCCCAGTGCCTGCACGGCTTGGTGGGGTG...GGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACCAAACGGAGACAAGGTaGGGTCCTGGCGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: VSALCLVMWYLRDARCLHQTETR*GPGGQP
Trigger: TGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTG...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGGCAGGGCCCCGCAGCTaGCCGCATGTCCATGCACCC +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSAGPRS*PHVHAP
Trigger: GGGTGCATGGACATGCGGCCAGCTGCGGGGCCCTGC...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGCAGGGCCCCGCAGCTaGCCGCATGTCCATGCACCC +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLAGPRS*PHVHAP
Trigger: GGGTGCATGGACATGCGGCCAGCTGCGGGGCCCTGC...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCAGCCCTTGCAGCTGGAGCTaGTATCCATGGTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: PLPDLLVVLLDVLLHAVSPCSWS*YPWCSR
Trigger: ACGACTACACCATGGATACCAGCTCCAGCTGCAAGG...GCTGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCAAGAAGGCCTTGCAGCTaGAGCTGGTATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: GRSRTSSWCSLMCFFMPSRRPCS*SWYPWC
Trigger: ACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCT...TGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCACCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTTCTTTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: SPLTTKLLLPSGLGSRLLCWAGS*SQPQLG
Trigger: CCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCA...AAGAAGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: QLSLSLVFGHVVLEGCPLCWAGS*SQPQLG
Trigger: CCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCA...CAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCGGGCCACATCCGTGCTaGGCAGGGTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSSVSALCLVMWYLRDARGPHPC*AGSWSQ
Trigger: CTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCC...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGCAGGCTTGGCTGAGGTaGGAAGCCCGACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRQAWLR*EARPGP
Trigger: GGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTG...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: QTAGHTGHRQSPAQSQPCSSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...ACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTTCCCGGACCTCCTCGTaGTGCTCCTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTRPCSPGKDTCRWWEAPSRTSS*CSLMCF
Trigger: GAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGA...AGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTTTCCGCACCTCTGTGTaGATGAGCTTCACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GTRPCSPGKDTCRWWEAPFRTSV*MSFTWR
Trigger: GCGCCACGTGAAGCTCATCCACACAGAGGTGCGGAA...AGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCCTTGATGTGCTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SLMCFFMPSAPRYTAVQPECRIW*TRRCFR
Trigger: GCGGAAGCACCTTCTCGTCCACCAAATGCGACATTC...GGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAGCACATCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCCTTGATGTGCTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLMCFFMPSAPRYTAVQPPECRI*WTRRCF
Trigger: GAAGCACCTTCTCGTCCACCAAATGCGACATTCGGG...GGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAGCACATCAAGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCACACTGCAAAGGCTTaGCTCCCGAATGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLHTAKA*LPNVAF
Trigger: AAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGGCCCGCTGCCTGCACTaGAACCCACAGACCTCACAC +
Preference number: 4 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQARCLH*NPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCGCCCGCTGCCTGCACTaGAACCCACAGACCTCACAC +
Preference number: 4 (lower is better)
Translates to: SSSVSALCLVMWYLRDARARCLH*NPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGNRRPH*SQAKSS
Trigger: GCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTT...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGG +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASCTLRL*AFSNRR
Trigger: CCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGCGGTGGCCCAGGTGGTaGTTCCGCCTCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSRWPRW*FRLQGQ
Trigger: CTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCG...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CAGCCGGAGGCTCCTTCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGAATTGACAGCTGCCTaGGCCATGTGCCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QPEAPSAKECSGTACRLWELTAA*AMCLPG
Trigger: GCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTC...CCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CAGCCGGAGGCTCCTTCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGCCATCTCAGCACCTCTaGGTCCCGCCAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: QPEAPSAKECSGTACRLWPSQHL*VPPDGK
Trigger: CTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGG...CCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CGACAGGCAGGGCGAGCCTCGCGTTGCAGGCATCACCTCTCACAACGAAGCTTCAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RQAGRASRCRHHLSQRSFKDTCR*WEAPPC
Trigger: GCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...GAAGCTTCGTTGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCTGCCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp TCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGCGGTGCATCACAGCCTaGGCTCCACCTGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SALCLVMWYLRDARCLHWRCITA*APPVEE
Trigger: CTCCTCTACAGGTGGAGCCCAGGCTGTGATGCACCG...CCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR TCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCAGCCGGGGAGGCGTTaGCCCTCTGCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKQPGRR*PSAGRT
Trigger: AGTCCTTCCTGCAGAGGGTCAACGCCTCCCCGGCTG...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCACACGACCTGGATaGCGCCGCAGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKPTRPG*RRSTRR
Trigger: CCTCCGAGTACTGCGGCGTCATCCAGGTCGTGTGGG...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCACTACCCTGGGAGGTCTaGGGGGCATCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GKDTCRWWEAPPCNEEHALPWEV*GASPGF
Trigger: GAACCCTGGGGATGCCCCTCAGACCTCCCAGGGTAG...TGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR TCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCTACCCTGGGAGGTCTaGGGGGCATCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKLPWEV*GASPGF
Trigger: GAACCCTGGGGATGCCCCTCAGACCTCCCAGGGTAG...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCTTGCACCTCTGTGTGGATaGGCTTCACGTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLCQRVHHGHVYIEVVGLAPLCG*ASRGAA
Trigger: TGCAGCGCCACGTGAAGCTCATCCACACAGAGGTGC...AAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SWVCVSGCTMDMCTLRLWWSCGT*GMPAAC
Trigger: GCAGGCAGCGGGCATCCCTCAAGTACCACATGACCA...CCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCAGAGGAAGGCTACTTaGGCCGGACACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRQRKAT*AGHQAR
Trigger: GCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTG...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCTGGCACTCTTTCAGTTaGCAGAGAGTGGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLWHSFS*QRVVRN
Trigger: GTTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCA...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCCCTCTCGGAGATGCTaGGCAGGCTTCTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QRLGSRMSHLVDEKVLPLPSRRC*AGFSRK
Trigger: TTTCCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGG...CAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACGGATGGCCTCTCCATaGTCGCTCCAGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVRMASP*SLQAPS
Trigger: AGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCG...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTGCTGGGCCACATCCGTaGTGGGCAGGGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSAGPHP*WAGSWS
Trigger: AGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGC...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCCTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACT +
Preference number: 4 (lower is better)
Translates to: SSSVSALCLVMWYLRDARLGTRP*SPGKDT
Trigger: AGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHRTSSW*SLMCFF
Trigger: GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCG...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCAGAAGGTGCTTCCGCTaGTTGAAGGTTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASRRCFR*LKVCPH
Trigger: ATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCT...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GCTCCTCCCTCTCACAACGAAGCTTCTTCTTCCATCCGGGCTTGGGTCCCGGCTTGGTGGACGAGAAGGTaGTTCCGCTGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: APPSHNEASSSIRAWVPAWWTRR*FRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCA...AGCCGGGACCCAAGCCCGGATGGAAGAAGAAGCTTCGTTGTGAGAGGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACATTGAGGGATGCCCGCTaGCTGCACTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: HHGHVYIEVVGLLKPPATLRDAR*LHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAA...TGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: SWVCVSGCTMDMCTLRLWGAHPH*RPQVGS
Trigger: CGAACCCACCTGAGGACGGCAGTGAGGATGAGCACC...CCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGGAGTCACTCAGCGTTTaGGGGAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVESLSV*GKINHW
Trigger: CCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGGACGGGACCTGCCACTaGACACCAGCCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQDGTCH*TPAQLP
Trigger: CGGGAGCTGGGCTGGTGTGCAGTGGCAGGTCCCGTC...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGTGTTCCGGCACAGCATaGAGACTATGGGGGACACAC +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQCSGTA*RLWGTH
Trigger: GTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACA...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGGGACTGCCTCTCTCTaGACCACACCCACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRGTASL*TTPTLL
Trigger: CAGGAGGGTGGGTGTGGTGCAGAGAGAGGCAGTCCC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGGAGCTCCTTGTGTTTaGGGAAGTGTGAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASGAPCV*GSVSEN
Trigger: GTTCTCACTCACACTTCCGCAAACACAAGGAGCTCC...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CACTGCGGAGTCCAGGCTGCTAGAGGTGCTCATCCTCACTGCCGTCCTCAGGTGCTGACTCACACTTACTaGAAAGGCTTGGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: HCGVQAARGAHPHCRPQVLTHTY*KGLAPE
Trigger: TTCGGGAGCCAAGCCTTTGCAGTAAGTGTGAGTCAG...CACCTGAGGACGGCAGTGAGGATGAGCACCTCTAGCAGCCTGGACTCCGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGGGCGACAGTGACCCATaGCGAGAGCCCGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQGDSDP*REPGLL
Trigger: GAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCC...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGACACCAAGCAGGCGCTaGAAGTCCCGTACGAGCACG +
Preference number: 4 (lower is better)
Translates to: MCTLRLWAFSNRRPHWSQTPSRR*KSRTST
Trigger: CGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGT...CTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCGACAAGGTGGGGTCCTaGCGGACAGCCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSDKVGS*RTATPS
Trigger: GCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTC...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GATGAGCTTCACGTGGCGCTGCAGGTAGCGGTCGATCATGAAAACCTTGTTGCAGACAAGGTGGGGTCCTaGCGGACAGCCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: DELHVALQVAVDHENLVADKVGS*RTATPS
Trigger: GCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTC...TGCAACAAGGTTTTCATGATCGACCGCTACCTGCAGCGCCACGTGAAGCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGGCCCCTGTTGGGGGCTaGGCACCGACCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQAPVGG*APTFAQ
Trigger: TTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGC...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTTGGAGCTGGTATCCATaGTGTAGTCGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LKPPATLVTGKVQLSLSLWSWYP*CSRGPG
Trigger: ACCAGGGCCACGACTACACCATGGATACCAGCTCCA...AAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACACGTCTCTTTGTCCCATaGCCACTTGACTGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTRLFVP*PLDCQR
Trigger: GCGCTGGCAGTCAAGTGGCCATGGGACAAAGAGACG...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCGTCTCTTTGTCCCATaGCCACTTGACTGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGRLFVP*PLDCQR
Trigger: GCGCTGGCAGTCAAGTGGCCATGGGACAAAGAGACG...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTCTCACCCAACTGCCCTaGGGCCCTGCAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPLTQLP*GPAKGQ
Trigger: CTGCCCCTTTGCAGGGCCCCAGGGCAGTTGGGTGAG...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCACTCACCCAACTGCCCTaGGGCCCTGCAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKDTCRWWEAPPCNEEHALTQLP*GPAKGQ
Trigger: CTGCCCCTTTGCAGGGCCCCAGGGCAGTTGGGTGAG...TGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CCA 90 bp TCACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGACTTTCCTTTCTaGGTAAGGCTCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SLPSSGGFGLHRLALCGHRDFPF*VRLKGL
Trigger: GAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCT...GTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACATTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: LLHAVSASVHGRAALVRTLCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...TGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCTTAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLCQRVHHGHVYIEVVGLNRRPH*SQAKSS
Trigger: GCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTT...AAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGCCGCCTGGCCCTCTGTaGTCACAGAGGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSPPGPL*SQRGSV
Trigger: CACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGG...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCTTCTTCCGCCTGGCCCTCTGTaGTCACAGAGGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PFWVRLKGLVRRLGILLLPPGPL*SQRGSV
Trigger: CACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGG...AAGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TTGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LSWVCVSGCTMDMCTLRLSGFTA*PSVVTE
Trigger: CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA...CAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTCAACCCCAGGACCAATaGGCCTATCATGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPQPQDQ*AYHGDC
Trigger: GCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTG...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGCCACTTCTTGGTGTTGCAGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGGAGGCATCTTGCAAATaGTTAAGAACGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EPLLGVADLRLGRLLLRVEASCK*LRTSPP
Trigger: AGGAGGGCTCGTTCTTAACCATTTGCAAGATGCCTC...CACACGGAGGAGGAGCCGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGCAGCAGCCTTGGTGTaGGTGCTCGAAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRAAALV*VLEVPG
Trigger: GCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp GTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCA +
Preference number: 4 (lower is better)
Translates to: VSGCTMDMCTLR*WAFSNRRPHWS
Trigger: TGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CAA 72 bp GTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATaGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: VCVSGCTMDMCT*RLWAFSNRRPH
Trigger: GTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAAGGGGCAGGCTTGGCTaGGGTGGGAAGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKRGRLG*GGKPDL
Trigger: CAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCT...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCGCACCTCTGTGTGGATaGGCTTCACGTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSAPLCG*ASRGAA
Trigger: TGCAGCGCCACGTGAAGCTCATCCACACAGAGGTGC...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGGGTGCTTCCGCTGCTTaGAGGTTTGTCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQGASAA*RFVHIR
Trigger: ACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACC...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCGAGCCTCATCTCTTCTaGCGGGACCTGCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSEPHLF*RDLPLH
Trigger: GTGCAGTGGCAGGTCCCGTCAGAAGAGATGAGGCTC...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCGGATGGCCTCTCCATaGTCGCTCCAGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCRMASP*SLQAPS
Trigger: AGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCG...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTGGGCACCGACCTTTaGACAAGGCTTCCGGCGACC +
Preference number: 4 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVLGTDL*TRLPAT
Trigger: GGTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAG...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCACCCCACCAAGCCGTaGAGGCACTGGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCHPTKP*RHWGLD
Trigger: ATCCAGCCCCCAGTGCCTGCACGGCTTGGTGGGGTG...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCACCAGCAAGAAGGCCTTaGAGCTGGAGCTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQAPARRP*SWSWYP
Trigger: TGGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGG...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCCATGGCCACTTGACTaGCAGCGCACTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTPWPLD*QRTVQQ
Trigger: TTGCTGGACAGTGCGCTGGCAGTCAAGTGGCCATGG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCTGCTTCTCACCCAACTaGCCTGGGGCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVCFSPN*PGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCA...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTGACGCTGACCTGGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: EVSAALQSRQQAAPDADLEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...CAGGTCAGCGTCAGGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGCTCGGTACACGGCCGTaGAGCCCTGGTAAGGACACT +
Preference number: 4 (lower is better)
Translates to: SRMSHLVDEKVLPLLEGLLGTRP*SPGKDT
Trigger: AGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG...CAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTTGATGTGCTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGAGAAGGTGCTTCCGCTaGTTGAAGGTTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LDVLLHAVSASVHGRAALRRCFR*LKVCPH
Trigger: ATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCT...CAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAGCACATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACAAGAAGGTGCTTCCGCTaGTTGAAGGTTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LLHAVSASVHGRAALVRTRRCFR*LKVCPH
Trigger: ATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCT...TGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACTGGTGGACGAGAAGGTaGTTCCGCTGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHWWTRR*FRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCA...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGTCTGTGTCAGCGGGTaGACCATGGACATGTGTACA +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHVCVSG*TMDMCT
Trigger: TGTACACATGTCCATGGTGCACCCGCTGACACAGAC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCGTCTGTGTCAGCGGGTaGACCATGGACATGTGTACA +
Preference number: 4 (lower is better)
Translates to: LRLWAFSNRRPHWSQAKSVCVSG*TMDMCT
Trigger: TGTACACATGTCCATGGTGCACCCGCTGACACAGAC...GGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRGAHPH*RPQVGS
Trigger: CGAACCCACCTGAGGACGGCAGTGAGGATGAGCACC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCTCCGACCCTCCCATaGGGGTGCACACGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCPPTLP*GCTRRV
Trigger: CACCCTTCGTGTGCACCCGCATGGGAGGGTCGGAGG...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAACAACTCGACTATTTCTaGCAGAGCCCCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HAAEAQMRRAALFRGILQQLDYF*QSPSPV
Trigger: CACAGGGGAGGGGCTCTGGCAGAAATAGTCGAGTTG...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCAGTTAATACCTCGGTaGCCGAAAAAGAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLQLIPR*PKKSFS
Trigger: TGAGAAGCTCTTTTTCGGGCACCGAGGTATTAACTG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCGCCACTTCTTGGTGTTaGAGACCTCAGGCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVATSWC*RPQAGA
Trigger: CGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGC...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCGTGCAGGCACTaGGGGCTGGATGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTKPCRH*GLDVIR
Trigger: TCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTT...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR CCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTCAGCCCCACACGACCTaGATGACGCCGCAGTACTCG +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPQPHTT*MTPQYS
Trigger: CGAGTACTGCGGCGTCATCCAGGTCGTGTGGGGCTG...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAAGAAGGCCTTGCAGCTaGAGCTGGTATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTRRPCS*SWYPWC
Trigger: ACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCT...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSLSEGG*ATSVLG
Trigger: GCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAG...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCTTCTTCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PFWVRLKGLVRRLGILLLLSEGG*ATSVLG
Trigger: GCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAG...AAGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR CCA 90 bp AGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTCAGGCTTGGCTGAGGTaGGAAGCCCGACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RLSFLGKAQRTRPKTGHFQAWLR*EARPGP
Trigger: GGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTG...AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR CCA 90 bp GGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCAGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GRSRTSSWCSLMCFFMPSDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...TGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: WAFSNRRPHWSQAKSSSVKDTCR*WEAPPS
Trigger: AGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...GACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGTCCCGGACCTCCTCGTaGTGCTCCTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QLSLSLVFGHVVLEGCPLSRTSS*CSLMCF
Trigger: GAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGA...CAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCTTCCGCACCTCTGTGTaGATGAGCTTCACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTFRTSV*MSFTWR
Trigger: GCGCCACGTGAAGCTCATCCACACAGAGGTGCGGAA...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTTCCGCACCTCTGTGTaGATGAGCTTCACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SSSVSALCLVMWYLRDARFRTSV*MSFTWR
Trigger: GCGCCACGTGAAGCTCATCCACACAGAGGTGCGGAA...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHPECRI*WTRRCF
Trigger: GAAGCACCTTCTCGTCCACCAAATGCGACATTCGGG...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGG +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHCTLRL*AFSNRR
Trigger: CCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTATCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVSGFTA*PSVVTE
Trigger: CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPTAVLR*VRASPP
Trigger: AGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVTAVLR*VRASPP
Trigger: AGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAACAGCATGCAGACTATaGGGGACACACCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTTACRL*GTHQPC
Trigger: ACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGT...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGCCAGCTCTTCGTGGCTaGGGATACAAGCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQPALRG*GYKHSF
Trigger: GAAACTGTGCTTGTATCCCCAGCCACGAAGAGCTGG...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGGTCCAGCTCTTCGTaGCTGGGGATACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTWSSSS*LGIQAQ
Trigger: CTGTGCTTGTATCCCCAGCCACGAAGAGCTGGACCA...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTGACGCTGACCTGAAGCTCCATTTTAGTTaGGACAGATTAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: EVSAALQSRQQAAPDADLKLHFS*DRLSTN
Trigger: GTTTGTGCTTAATCTGTCCCAACTAAAATGGAGCTT...CAGGTCAGCGTCAGGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTAAGAGGAAGATATCCTaGCTGGCACTCTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPKRKIS*LALFQL
Trigger: CAACTGAAAGAGTGCCAGCCAGGATATCTTCCTCTT...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTGTGGTGCAGCAGCCTTaGTGTGGGTGCTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSVVQQP*CGCSKS
Trigger: GGACTTCGAGCACCCACACCAAGGCTGCTGCACCAC...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCGTGGTGCAGCAGCCTTaGTGTGGGTGCTCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSVVQQP*CGCSKS
Trigger: GGACTTCGAGCACCCACACCAAGGCTGCTGCACCAC...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AGCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGAATGAAGAGCATGCATaGAGCCCCGGCCCCGACAGG +
Preference number: 4 (lower is better)
Translates to: SPGKDTCRWWEAPPCNEENEEHA*SPGPDR
Trigger: CCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATT...CTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
3UTR CAA 72 bp CTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTaGGGCCATGTGGGGGACATGAGAATTGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LTRGRGNVKMPT*GHVGDMRIDSC
Trigger: GCAGCTGTCAATTCTCATGTCCCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp AGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTGCACTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: SSVSALCLVMWY*RDARCLHWNPQ
Trigger: CTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGTCCCATGGCCACTTaGCTGCCAGCGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPCPMAT*LPAHCP
Trigger: TGGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACA...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TCTTCTTACCAGAGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGCTACCCTGGGAGGTCTaGGGGGCATCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSYQRLSFLGKAQRTRPKLPWEV*GASPGF
Trigger: GAACCCTGGGGATGCCCCTCAGACCTCCCAGGGTAG...CTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCTGGTAAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR TCA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCCGATCATCCGAGGTTaGAGATGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGPIIRG*RWKLLL
Trigger: GAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGG...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAGGTAGCGGTCGATCATaGAAACCTTGTTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTGSGRS*KPCCSQ
Trigger: CTGGCTGCAACAAGGTTTTCATGATCGACCGCTACC...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAGGTGCTTCCGCTGCTTaGAGGTTTGTCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTGASAA*RFVHIR
Trigger: ACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACC...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCGGTGCTTCCGCTGCTTaGAGGTTTGTCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: GHVYIEVVGLLKPPATLVGASAA*RFVHIR
Trigger: ACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACC...GACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCGGTGCTTCCGCTGCTTaGAGGTTTGTCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: LGLCQRVHHGHVYIEVVGGASAA*RFVHIR
Trigger: ACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACC...GCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCGGAATCAATTATTTATaGACTGTCCGGCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLGINYL*TVRPRV
Trigger: GACTCGGGGCCGGACAGTTCATAAATAATTGATTCC...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGGGGGGACATGAGAATTaGCAGCTGCCTGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQGGHEN*QLPGPC
Trigger: ACATGGCCCAGGCAGCTGTCAATTCTCATGTCCCCC...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCCTCTGCTCCACAGATaGGCAGTATCCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTPLLHR*AVSLGI
Trigger: GATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACAGAACGAGCCCTCCTTaGGGTTCCTTGCTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHRTSPP*GSLLSK
Trigger: CTTACTTAGCAAGGAACCTCAAGGAGGGCTCGTTCT...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCCCTCTCGGAGATGCTaGGCAGGCTTCTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSPSRRC*AGFSRK
Trigger: TTTCCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGG...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCACAGATATAGCGCCCTCTCGGAGATaGTGCGCAGGCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: DEKVLPLLEGLSTFVTDIAPSRR*CAGFSR
Trigger: CCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGC...TATATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGAGCACGCGCTCCTCTaGGGATGGCCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLEHALL*GWPLHA
Trigger: AGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTC...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCCTGGCCGCATGTCCATaGACCCACCCCACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GKESIIYELSGPESLSVCLAACP*THPTKP
Trigger: CGGCTTGGTGGGGTGGGTGCATGGACATGCGGCCAG...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGCCAGCAAGAAGGCCTTaGAGCTGGAGCTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQPARRP*SWSWYP
Trigger: TGGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGG...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TTGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGCCATGGCCACTTGACTaGCAGCGCACTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LSWVCVSGCTMDMCTLRLPWPLD*QRTVQQ
Trigger: TTGCTGGACAGTGCGCTGGCAGTCAAGTGGCCATGG...CAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTACTGCCCTGGGGCCCTaGAAAGGGGCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RLSFLGKAQRTRPKTGHFTALGP*KGAGLA
Trigger: AGCCAAGCCTGCCCCTTTGCAGGGCCCCAGGGCAGT...AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR GCA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHVEDGS*FSPNCP
Trigger: AGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAAC...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCCCGACAGGCAGGGCGAGGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PPCNEEHAWSPGPDRQGEEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...CTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR GCA 90 bp CAGCCGGAGGCTCCTTCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGTGGTGCTCCTTGATGTaGTTCTTCATGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QPEAPSAKECSGTACRLWWCSLM*FFMPSA
Trigger: CGCTGACGGCATGAAGAAGCACATCAAGGAGCACCA...CCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVVVLEG*PLPALE
Trigger: TTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: KSSSVSALCLVMWYLRDAGAHPH*RPQVGS
Trigger: CGAACCCACCTGAGGACGGCAGTGAGGATGAGCACC...GGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAGCTGATCGTGGGGACTaGGACCCAGAGGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKADRGD*DPEVSA
Trigger: GGCGCTCACCTCTGGGTCGCAGTCCCCACGATCAGC...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGGCCGGAGGCTCCTTCTaGCAAAGAATGTTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQAGGSF*QRMFRH
Trigger: GTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGC...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCGCCTATCATGGGGACTaGCTCTCTCTGCACCACACC +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVAYHGD*LSLHHT
Trigger: GGTGTGGTGCAGAGAGAGGCAGTCCCCATGATAGGC...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGAGCACCACAGACCTaGCAAAGGCTTTCCACGTTT +
Preference number: 4 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQRAPQT*QRLSTF
Trigger: AAACGTGGAAAGCCTTTGGCAGGTCTGTGGTGCTCT...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGGGACAGCTCAGATCCTaGGGACCTTGGCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: QLSLSLVFGHVVLEGCPLGQLRS*GPWLST
Trigger: AGTGGAAAGCCAAGGTCCGCAGGATCTGAGCTGTCC...CAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGGACAAGGTGGGGTCCTaGCGGACAGCCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSDKVGS*RTATPS
Trigger: GCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTC...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGAAGCCGTGCAGGCACTaGGGGCTGGATGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLKPCRH*GLDVIR
Trigger: TCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTT...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTACAGCCCCACACGACCTaGATGACGCCGCAGTACTCG +
Preference number: 4 (lower is better)
Translates to: TTDLPKAFHVCAAILECLQPHTT*MTPQYS
Trigger: CGAGTACTGCGGCGTCATCCAGGTCGTGTGGGGCTG...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCACAGATACAGCCCCACACGACCTaGATGACGCCGCAGTACTCG +
Preference number: 4 (lower is better)
Translates to: WTRRCFRCLKVCPHSSQIQPHTT*MTPQYS
Trigger: CGAGTACTGCGGCGTCATCCAGGTCGTGTGGGGCTG...TATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTAGAAGGCCTTGCAGCTaGAGCTGGTATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGRRPCS*SWYPWC
Trigger: ACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCT...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: AKSSSVSALCLVMWYLRDCWAGS*SQPQLG
Trigger: CCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCA...ATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGGCAAAGGGGCAGGCTTaGCTGAGGTGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQAKGQA*LRWEAR
Trigger: TCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGC...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAACTCACCCAACTGCCCTaGGGCCCTGCAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKLTQLP*GPAKGQ
Trigger: CTGCCCCTTTGCAGGGCCCCAGGGCAGTTGGGTGAG...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCTTGATGTGCTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCAGAGACTTTCCTTTCTaGGTAAGGCTCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SLMCFFMPSAPRYTAVQPRDFPF*VRLKGL
Trigger: GAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCT...GGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAGCACATCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHKDTCR*WEAPPS
Trigger: AGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGTTCCGCACCTCTGTGTaGATGAGCTTCACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRFRTSV*MSFTWR
Trigger: GCGCCACGTGAAGCTCATCCACACAGAGGTGCGGAA...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGCCCGCTGCCTGCACTaGAACCCACAGACCTCACAC +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLARCLH*NPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGCTTCTTGCCCGCTGCCTGCACTaGAACCCACAGACCTCACAC +
Preference number: 4 (lower is better)
Translates to: VRTLVDGGKLLPLTTKLLARCLH*NPQTSH
Trigger: GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC...AAGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCTTCTTCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SFLGKAQRTRPKTGHFASSGFTA*PSVVTE
Trigger: CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA...AGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCTTCTTACTGCCGTCCTCAGGTaGGTTCGGGCTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: PFWVRLKGLVRRLGILLLTAVLR*VRASPP
Trigger: AGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT...AAGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGGCCATGTGCCTGCCTaGCTGGCAATACAACTCGAC +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRGHVPA*LAIQLD
Trigger: GTCGAGTTGTATTGCCAGCCAGGCAGGCACATGGCC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTGAATTGACAGCTGCCTaGGCCATGTGCCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPELTAA*AMCLPG
Trigger: GCCAGGCAGGCACATGGCCCAGGCAGCTGTCAATTC...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCATGAGCAGTATCCCTTaGCATCACCTGCTACCTTTC +
Preference number: 4 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLMSSIP*HHLLPF
Trigger: GAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCAT...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGCCATCTCAGCACCTCTaGGTCCCGCCAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVPSQHL*VPPDGK
Trigger: CTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGG...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACACACAGACCTCACACCTaGGGGACAGAGGCAGATAAG +
Preference number: 4 (lower is better)
Translates to: HVYIEVVGLLKPPATLVTHRPHT*GTEADK
Trigger: CTTATCTGCCTCTGTCCCCCAGGTGTGAGGTCTGTG...TGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568064.5
3UTR CAA 72 bp TCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SQAKSSSVSALC*VMWYLRDARCL
Trigger: CAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CAA 72 bp CACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTaGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: HWSQAKSSSVSA*CLVMWYLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
3UTR CAA 72 bp CTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LTLQRLGSRMSH*VDEKVLPLLEG
Trigger: ACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCCGATCATCCGAGGTTaGAGATGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTPIIRG*RWKLLL
Trigger: GAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCGGTAGCGGTCGATCATaGAAACCTTGTTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTGSGRS*KPCCSQ
Trigger: CTGGCTGCAACAAGGTTTTCATGATCGACCGCTACC...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCGGTAGCGGTCGATCATaGAAACCTTGTTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSSVSALCLVMWYLRDARGSGRS*KPCCSQ
Trigger: CTGGCTGCAACAAGGTTTTCATGATCGACCGCTACC...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGTGGTCATGTGGTACTTaGGGGATGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSWSCGT*GMPAAC
Trigger: GCAGGCAGCGGGCATCCCTCAAGTACCACATGACCA...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTGGGGGACATGAGAATTaGCAGCTGCCTGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPGGHEN*QLPGPC
Trigger: ACATGGCCCAGGCAGCTGTCAATTCTCATGTCCCCC...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGTCTCTCCTACTTCCATaGAGACGCGGCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQSLLLP*RRGHQG
Trigger: TCCCTGATGGCCGCGTCTTCATGGAAGTAGGAGAGA...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCACCTCTGCTCCACAGATaGGCAGTATCCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPPLLHR*AVSLGI
Trigger: GATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGG...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTTTGCGGAAGTGTGAGTaGGAACTCCCAGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLLRKCE*ELPGRG
Trigger: CCCACGGCCTGGGAGTTCTCACTCACACTTCCGCAA...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTTTCCACTCCGCTCGCTaGGCCGGTGCATCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RLSFLGKAQRTRPKTGHFFHSAR*AGASQP
Trigger: AGGCTGTGATGCACCGGCTCAGCGAGCGGAGTGGAA...AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR GCA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGGGCGTGGCAGCTCTTaGAGACAAACGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRGRGSS*RQTETR
Trigger: CCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCC...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAACTGGGCACCGACCTTTaGACAAGGCTTCCGGCGACC +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKLGTDL*TRLPAT
Trigger: GGTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAG...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTAGGTGCTCATCCTCACTaGCGTCCTCAGGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: TTDLPKAFHVCAAILECLGAHPH*RPQVGS
Trigger: CGAACCCACCTGAGGACGGCAGTGAGGATGAGCACC...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CTTCTTCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACAACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLHAVSASVHGRAALVRTTNLLD*FSGERN
Trigger: ATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGT...TGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568295.5
CDS-3UTR GCA 90 bp CCCTGTGGTCTGAGGCCTAGTGGGCGGCATGGGCTGAGGACCTGCTCCTCTCTCACATGGAGCTCTTGTTaGACTAAAAAGTGGATTACA +
Preference number: 4 (lower is better)
Translates to: PCGLRPSGRHGLRTCSSLTWSSC*TKKWIT
Trigger: TGTAATCCACTTTTTAGTGCAACAAGAGCTCCATGT...GAGAGAGGAGCAGGTCCTCAGCCCATGCCGCCCACTAGGCCTCAGACCACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGATGAGAATTGACAGCTaGCTGGGCCATGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQMRIDS*LGHVPA
Trigger: GGCAGGCACATGGCCCAGGCAGCTGTCAATTCTCAT...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCGGGAAGAGGCCTTCCTaGATGTTGCTGTGGACATGT +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTGKRPS*MLLWTC
Trigger: ACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCC...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGGGAAGGGTTGTCTGTaGCTCTGCTCCACAGATGAG +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRGKGCL*LCSTDE
Trigger: CTCATCTGTGGAGCAGAGGCACAGACAACCCTTCCC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGGGGTTTCACCATATTaGCAGGCTGGTCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPGVSPY*QAGLEL
Trigger: CAGTTCAAGACCAGCCTGGCAATATGGTGAAACCCC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGACACCAAGCAGGCGCTaGAAGTCCCGTACGAGCACG +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSTPSRR*KSRTST
Trigger: CGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGT...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGCAAACGGAGACAAGGTaGGGTCCTGGCGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSQTETR*GPGGQP
Trigger: TGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTG...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGTGGAGCTGGTATCCATaGTGTAGTCGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRWSWYP*CSRGPG
Trigger: ACCAGGGCCACGACTACACCATGGATACCAGCTCCA...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCATGGAGCTGGTATCCATaGTGTAGTCGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPWSWYP*CSRGPG
Trigger: ACCAGGGCCACGACTACACCATGGATACCAGCTCCA...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGAGAAGGCCTTGCAGCTaGAGCTGGTATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQRRPCS*SWYPWC
Trigger: ACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCT...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGCTTCTCGTCTCTTTGTCCCATaGCCACTTGACTGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GKDTCRWWEAPPSHNEASRLFVP*PLDCQR
Trigger: GCGCTGGCAGTCAAGTGGCCATGGGACAAAGAGACG...AGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAGGGCCACATCCGTGCTaGGCAGGGTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKGPHPC*AGSWSQ
Trigger: CTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCC...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCAAAGGGGCAGGCTTaGCTGAGGTGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RLSFLGKAQRTRPKTGHFAKGQA*LRWEAR
Trigger: TCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGC...AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCAGAGACTTTCCTTTCTaGGTAAGGCTCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLRDFPF*VRLKGL
Trigger: GAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCT...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKSSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGTCTTCCATCCGGGCTTaGGTCCCGGCTTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVSSIRA*VPASSE
Trigger: TTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAGA...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTTCCGCACCTCTGTGTaGATGAGCTTCACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPFRTSV*MSFTWR
Trigger: GCGCCACGTGAAGCTCATCCACACAGAGGTGCGGAA...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAACCGCCGGCCACACTaGTCACAGGCAAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSNRRPH*SQAKSS
Trigger: GCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTT...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCTGTACATTGAGGTTGTaGGCCTTCTCAAACCGCCGG +
Preference number: 4 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTCTLRL*AFSNRR
Trigger: CCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGTGGTCCAGCTCTTCGTaGCTGGGGATACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLWSSSS*LGIQAQ
Trigger: CTGTGCTTGTATCCCCAGCCACGAAGAGCTGGACCA...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTCTGGGTCCCGCCAGATaGGAAGGGTTGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLLGPAR*EGLSVP
Trigger: AGGCACAGACAACCCTTCCCATCTGGCGGGACCCAG...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACAATTTACTGGCTCACTaGTCAACCCCAGGACCAATG +
Preference number: 4 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHNLLAH*STPGPM
Trigger: CATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp GAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTaGAAGCTGGTCCAGCTCTTCGTGGCTGGGGATACA +
Preference number: 4 (lower is better)
Translates to: EEAFLHVAVDMY*KLVQLFVAGDT
Trigger: TGTATCCCCAGCCACGAAGAGCTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp TGTCTGTGCCTCTGCTCCACAGATGAGCAGTATCCCTaGGCATCACCTGCTACCTTTCCAGCAGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CLCLCSTDEQYP*ASPATFPAVCS
Trigger: GCTACAGACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCACAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp GTCCCCAGCACTGATAATAGGCAGAGATGTCCAGAGTaGCCTGAGCCACTTCTTGGTGTTGCAGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: VPSTDNRQRCPE*PEPLLGVADLR
Trigger: CCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCTGCCTATTATCAGTGCTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp GCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTaGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASGLWAFLLMSY*RTWCSSLGVGA
Trigger: AGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GATGAGCTTCACGTGGCGCTGCAGGTAGCGGTCGATCATGAAAACCTTGTTGCACCGATCATCCGAGGTTaGAGATGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DELHVALQVAVDHENLVAPIIRG*RWKLLL
Trigger: GAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGG...TGCAACAAGGTTTTCATGATCGACCGCTACCTGCAGCGCCACGTGAAGCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGGGTGCTTCCGCTGCTTaGAGGTTTGTCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: SRMSHLVDEKVLPLLEGLGASAA*RFVHIR
Trigger: ACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACC...CAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAATTGCGGAAGTGTGAGTaGGAACTCCCAGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKLRKCE*ELPGRG
Trigger: CCCACGGCCTGGGAGTTCTCACTCACACTTCCGCAA...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCACACCAGCAAGAAGGCCTTaGAGCTGGAGCTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: LVDEKVLPLLEGLSTFVTPARRP*SWSWYP
Trigger: TGGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGG...TGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ACTCTTCTTACCAGAGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGATGCTTCTCACCCAACTaGCCTGGGGCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TLLTRDFPFWVRLKGLVRCFSPN*PGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCA...TCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCTGGTAAGAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR GCA 90 bp GGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCTTGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GLCQRVHHGHVYIEVVGLVEDGS*FSPNCP
Trigger: AGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAAC...AAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCATGGTGCTCCTTGATGTaGTTCTTCATGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPWCSLM*FFMPSA
Trigger: CGCTGACGGCATGAAGAAGCACATCAAGGAGCACCA...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGCTCCTCTCTCACAGCTaGTGGCTGATCGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSLLSHS*WLIVGT
Trigger: AGTCCCCACGATCAGCCAGCAGCTGTGAGAGAGGAG...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGCCACTTCTTGGTGTTaGAGACCTCAGGCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GKESIIYELSGPESLSVCATSWC*RPQAGA
Trigger: CGCCCCAGCCTGAGGTCTGCAACACCAAGAAGTGGC...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAGCCGGAGGCTCCTTCTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGCTTTCCACGTTTGTaGAGCAATCCTCGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: QPEAPSAKECSGTACRLWGFPRL*SNPRVF
Trigger: AAACACTCGAGGATTGCTGCACAAACGTGGAAAGCC...CCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAGAAGGAGCCTCCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCTTCTAAGCCGTGCAGGCACTaGGGGCTGGATGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: SFLGKAQRTRPKTGHFASKPCRH*GLDVIR
Trigger: TCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTT...AGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAAGAAGGCCTTGCAGCTaGAGCTGGTATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPRRPCS*SWYPWC
Trigger: ACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCT...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACAAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HHGHVYIEVVGLLKPPATKDTCR*WEAPPS
Trigger: AGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...TGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRECRIW*TRRCFR
Trigger: GCGGAAGCACCTTCTCGTCCACCAAATGCGACATTC...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCACACTGCAAAGGCTTaGCTCCCGAATGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: GLCQRVHHGHVYIEVVGLHTAKA*LPNVAF
Trigger: AAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTG...AAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAACTCTCTCACAGCTGCTaGCTGATCGTGGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKLSHSC*LIVGTA
Trigger: CGCAGTCCCCACGATCAGCCAGCAGCTGTGAGAGAG...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTACAGCATGCAGACTATaGGGGACACACCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPTACRL*GTHQPC
Trigger: ACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGT...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGAGGCATCTTGCAAATaGTTAAGAACGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPEASCK*LRTSPP
Trigger: AGGAGGGCTCGTTCTTAACCATTTGCAAGATGCCTC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGGGCCATTCTCAGGGTTaGTCTCCTGCGGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLGHSQG*SPAVYR
Trigger: TCTGTAAACCGCAGGAGACCAACCCTGAGAATGGCC...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGGCAACCTCAGCCTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLATSAS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAGGCTGAGGTTGC...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp GCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTaGCAAATGGTTAAGAACGAGCCCTCCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AQMRRAALFRGI*QMVKNEPSLRF
Trigger: GAACCTCAAGGAGGGCTCGTTCTTAACCATTTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCACTGGGGGCTGGATGTaGTCAGATCCACCAGACACG +
Preference number: 4 (lower is better)
Translates to: GKESIIYELSGPESLSVCTGGWM*SDPPDT
Trigger: CGTGTCTGGTGGATCTGATCACATCCAGCCCCCAGT...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR TCA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGGTAGCGGTCGATCATaGAAACCTTGTTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRGSGRS*KPCCSQ
Trigger: CTGGCTGCAACAAGGTTTTCATGATCGACCGCTACC...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTAGGTAGCGGTCGATCATaGAAACCTTGTTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVGSGRS*KPCCSQ
Trigger: CTGGCTGCAACAAGGTTTTCATGATCGACCGCTACC...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTTCTCTCCTACTTCCATaGAGACGCGGCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLSLLLP*RRGHQG
Trigger: TCCCTGATGGCCGCGTCTTCATGGAAGTAGGAGAGA...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGTTTTCTTCTTCTCCTTaGTGGGCCTGCTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRFSSSP*WACCRH
Trigger: GTGACGACAGCAGGCCCATCAAGGAGAAGAAGAAAA...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAGGGCGTGGCAGCTCTTaGAGACAAACGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKGRGSS*RQTETR
Trigger: CCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCC...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSVEDGS*FSPNCP
Trigger: AGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAAC...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGCGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSRTSSW*SLMCFF
Trigger: GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCG...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCGTCTGTGTCAGCGGGTaGACCATGGACATGTGTACA +
Preference number: 4 (lower is better)
Translates to: KSSSVSALCLVMWYLRDAVCVSG*TMDMCT
Trigger: TGTACACATGTCCATGGTGCACCCGCTGACACAGAC...GGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGGAGTCACTCAGCGTTTaGGGGAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: ALVRTLVDGGKLLPLTTKESLSV*GKINHW
Trigger: CCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC...CTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568295.5
CDS-3UTR GCA 90 bp CCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCAGCACATGGAGCTCTTGTTaGACTAAAAAGTGGATTACA +
Preference number: 4 (lower is better)
Translates to: PLPDLLVVLLDVLLHAVSTWSSC*TKKWIT
Trigger: TGTAATCCACTTTTTAGTGCAACAAGAGCTCCATGT...GCTGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568295.5
CDS-3UTR GCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTAGAGGTAACGTCAAGATaGCCACCTTGGGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: TTDLPKAFHVCAAILECLEVTSR*PPWAMW
Trigger: CCACATGGCCCAAGGTGGGCATCTTGACGTTACCTC...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGTGTTCCGGCACAGCATaGAGACTATGGGGGACACAC +
Preference number: 4 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQCSGTA*RLWGTH
Trigger: GTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACA...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGGGGAAGGGTTGTCTGTaGCTCTGCTCCACAGATGAG +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSGKGCL*LCSTDE
Trigger: CTCATCTGTGGAGCAGAGGCACAGACAACCCTTCCC...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTCAGGGTTGGTCTCCTaGGGTTTACAGAGCACCACA +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPSGLVS*GLQSTT
Trigger: TGTGGTGCTCTGTAAACCGCAGGAGACCAACCCTGA...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCGGAGCTCCTTGTGTTTaGGGAAGTGTGAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVGAPCV*GSVSEN
Trigger: GTTCTCACTCACACTTCCGCAAACACAAGGAGCTCC...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGCTTCTTTGGAGCTGGTATCCATaGTGTAGTCGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VRTLVDGGKLLPLTTKLLWSWYP*CSRGPG
Trigger: ACCAGGGCCACGACTACACCATGGATACCAGCTCCA...AAGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGACACTTGTAGATGGTaGGAAGCTCCTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRDTCRW*EAPPSH
Trigger: GTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTC...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGGACACTTGTAGATGGTaGGAAGCTCCTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKDTCRW*EAPPSH
Trigger: GTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTC...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KSSSVSALCLVMWYLRDAPECRI*WTRRCF
Trigger: GAAGCACCTTCTCGTCCACCAAATGCGACATTCGGG...GGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCTGCTGACAGGTACCTaGGTATCCTCAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQLLTGT*VSSAQA
Trigger: AGCCTGAGCTGAGGATACCCAGGTACCTGTCAGCAG...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCTCTTATTTGAGGACGTaGTGCAGCAGCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CSTDEQYPLASPATFPAVSYLRT*CSSLGV
Trigger: CACACCAAGGCTGCTGCACCACGTCCTCAAATAAGA...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTGGACATGTGTACATTaGGGTTGTGGGCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SRMSHLVDEKVLPLLEGLWTCVH*GCGPSQ
Trigger: TTGAGAAGGCCCACAACCTCAATGTACACATGTCCA...CAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACGGGCGTGGCAGCTCTTaGAGACAAACGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINGRGSS*RQTETR
Trigger: CCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCC...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ACTCTTCTTACCAGAGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAGAGGCGTTGACCCTCTaGAGGAAGGACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TLLTRDFPFWVRLKGLVREALTL*RKDLRR
Trigger: CCTTCTCAAGTCCTTCCTGCAGAGGGTCAACGCCTC...TCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCTGGTAAGAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCAGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GKDTCRWWEAPPCNEEHAVEDGS*FSPNCP
Trigger: AGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAAC...TGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR GCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCCGGACCTCCTCGTGGTaGTCCTTGATGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GKESIIYELSGPESLSVCRTSSW*SLMCFF
Trigger: GAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCG...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCTGGTGGACGAGAAGGTaGTTCCGCTGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: KVQLSLSLVFGHVVLEGCWWTRR*FRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCA...GCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTTCCCTTGGCATCACCTaGTACCTTTCCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLSLGIT*YLSSSL
Trigger: CAGACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGA...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTATCAGGGTTGGTCTCCTaGGGTTTACAGAGCACCACA +
Preference number: 4 (lower is better)
Translates to: TTDLPKAFHVCAAILECLSGLVS*GLQSTT
Trigger: TGTGGTGCTCTGTAAACCGCAGGAGACCAACCCTGA...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGTATTTGAGGACGTGGTaGAGCAGCCTTGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSYLRTW*SSLGVG
Trigger: ACCCACACCAAGGCTGCTGCACCACGTCCTCAAATA...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCACAGATATATGGAGCTGGTATCCATaGTGTAGTCGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: DEKVLPLLEGLSTFVTDIWSWYP*CSRGPG
Trigger: ACCAGGGCCACGACTACACCATGGATACCAGCTCCA...TATATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACAAGAGACTTTCCTTTCTaGGTAAGGCTCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: HHGHVYIEVVGLLKPPATRDFPF*VRLKGL
Trigger: GAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCT...TGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGCACACTGCAAAGGCTTaGCTCCCGAATGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRHTAKA*LPNVAF
Trigger: AAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTG...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCAGTTTCACCTCCAGCTaGCAGGAGCCTGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GKESIIYELSGPESLSVCSFTSS*QEPGAQ
Trigger: TTGAGCTCCAGGCTCCTGCCAGCTGGAGGTGAAACT...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTAGGCCATTCTCAGGGTTaGTCTCCTGCGGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: TTDLPKAFHVCAAILECLGHSQG*SPAVYR
Trigger: TCTGTAAACCGCAGGAGACCAACCCTGAGAATGGCC...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGACTGCATCCGGCCTGTaGGCCTTTCTTTTAATGTCT +
Preference number: 4 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQTASGL*AFLLMS
Trigger: AGACATTAAAAGAAAGGCCCACAGGCCGGATGCAGT...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCAGCCTCCCGAGTAGCTaGGATTACAGGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GKESIIYELSGPESLSVCSLPSS*DYRRES
Trigger: AGACTCACGCCTGTAATCCCAGCTACTCGGGAGGCT...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
3UTR CAA 72 bp TTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGATATAGTTCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: LVDEKVLPLLEG*STFVTDIVPHL
Trigger: GAGGTGCGGAACTATATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR TCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFWQRRQ*PMARAR
Trigger: CCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAGGGGCAGGCTTGGCTaGGGTGGGAAGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMRGRLG*GGKPDL
Trigger: CAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCT...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCCCGATCATCCGAGGTTaGAGATGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GKESIIYELSGPESLSVCPIIRG*RWKLLL
Trigger: GAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGG...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGGGAATCAATTATTTATaGACTGTCCGGCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVGINYL*TVRPRV
Trigger: GACTCGGGGCCGGACAGTTCATAAATAATTGATTCC...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTAGAAGGTGCTTCCGCTaGTTGAAGGTTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPRRCFR*LKVCPH
Trigger: ATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCT...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGAGAAGGTGCTTCCGCTaGTTGAAGGTTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRRRCFR*LKVCPH
Trigger: ATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCT...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CATGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGGGATGCCCGCTGCCTaGACTGGAACCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: HGALVALKSGLQISSTALGMPAA*TGTHRP
Trigger: AGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC...TAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR GCA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGAGTCACTCAGCGTTTaGGGGAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRESLSV*GKINHW
Trigger: CCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCAGTTAATACCTCGGTaGCCGAAAAAGAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRQLIPR*PKKSFS
Trigger: TGAGAAGCTCTTTTTCGGGCACCGAGGTATTAACTG...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGAGGTCCGTGCGTTCGTaGATTTTTCTGGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: TGKVQLSLSLVFGHVVLERSVRS*IFLGRD
Trigger: ATCTCTGCCCAGAAAAATGCACGAACGCACGGACCT...CTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR CCA 90 bp CATGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGCCCCTGTTGGGGGCTaGGCACCGACCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: HGALVALKSGLQISSTALAPVGG*APTFAQ
Trigger: TTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGC...TAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR CCA 90 bp CATGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGGGCCACATCCGTGCTaGGCAGGGTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HGALVALKSGLQISSTALGPHPC*AGSWSQ
Trigger: CTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCC...TAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR CCA 90 bp CTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTAGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LVTGKVQLSLSLVFGHVVDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...TACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp GTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGCTTCTTAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VRTLVDGGKLLPLTTKLLKDTCR*WEAPPS
Trigger: AGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...AAGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTATGAGCAGTATCCCTTaGCATCACCTGCTACCTTTC +
Preference number: 4 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPMSSIP*HHLLPF
Trigger: GAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCAT...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAAATAAGATAATTTACTaGCTCACTGGTCAACCCCAG +
Preference number: 4 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTNKIIY*LTGQPQ
Trigger: CTGGGGTTGACCAGTGAGCCAGTAAATTATCTTATT...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACAGCCTCCCGAGTAGCTaGGATTACAGGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINSLPSS*DYRRES
Trigger: AGACTCACGCCTGTAATCCCAGCTACTCGGGAGGCT...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGGCCGGTCCCGCTTCATaGCAGCGGAGGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMAGPAS*QRRTPA
Trigger: TGCTGGCGTCCTCCGCTGCCATGAAGCGGGACCGGC...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443381.7
ENST00000568295.5
3UTR CAA 72 bp GAGAAGAGGAAGATATCCTGGCTGGCACTCTTTCAGTaGACAGAGAGTGGTAAGAAACACGCTGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: EKRKISWLALFQ*TESGKKHAAEA
Trigger: TGCCTCAGCAGCGTGTTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCAGCCAGGATATCTTCCTCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGACTGGGGGCTGGATGTaGTCAGATCCACCAGACACG +
Preference number: 4 (lower is better)
Translates to: CCTKKWITNLLDCFSGERTGGWM*SDPPDT
Trigger: CGTGTCTGGTGGATCTGATCACATCCAGCCCCCAGT...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR TCA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTTGGACATGTGTACATTaGGGTTGTGGGCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLWTCVH*GCGPSQ
Trigger: TTGAGAAGGCCCACAACCTCAATGTACACATGTCCA...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGCCCTCTCGGAGATGCTaGGCAGGCTTCTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CCTKKWITNLLDCFSGERPSRRC*AGFSRK
Trigger: TTTCCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGG...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR GCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTACTGCCCTGGGGCCCTaGAAAGGGGCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFTALGP*KGAGLA
Trigger: AGCCAAGCCTGCCCCTTTGCAGGGCCCCAGGGCAGT...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKVEDGS*FSPNCP
Trigger: AGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAAC...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: CLCSTDEQYPLASPATFPTNLLD*FSGERN
Trigger: ATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGT...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSTNLLD*FSGERN
Trigger: ATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGT...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAAGCACACCAGGCTGCTaGCTTTCGCTTTTTACAGGT +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKSTPGC*LSLFTG
Trigger: ACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCT...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAAGAGATGTCCAGAGTTaGCTGAGCCACTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKRDVQS*LSHFLV
Trigger: CACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCT...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACTATTTGAGGACGTGGTaGAGCAGCCTTGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINYLRTW*SSLGVG
Trigger: ACCCACACCAAGGCTGCTGCACCACGTCCTCAAATA...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCTTCTGACTCGTCCGAAGACTaGGCATTTTGCTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SFLGKAQRTRPKTGHFASDSSED*AFCFLS
Trigger: TGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTC...AGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR CCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINPECRI*WTRRCF
Trigger: GAAGCACCTTCTCGTCCACCAAATGCGACATTCGGG...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp CTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTTGGGCCATGTGGGGATTACAAGCATAACATaGAGCTCTTGTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: LLTRGRGNVKMPTLGHVGITSIT*SSCCTK
Trigger: TTTAGTGCAACAAGAGCTCCATGTTATGCTTGTAAT...CCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGCATCCGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGATGTGCCTGCCTGGCTaGCAATACAACTCGACTATT +
Preference number: 4 (lower is better)
Translates to: CIRPVGLSFNVLFEDVVQMCLPG*QYNSTI
Trigger: AATAGTCGAGTTGTATTGCCAGCCAGGCAGGCACAT...CTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACGCGCCCTCTCGGAGATaGTGCGCAGGCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNAPSRR*CAGFSR
Trigger: CCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGC...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCACAAATCTCCTCGACTaGTTTAGTGGGGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KSSSVSALCLVMWYLRDATNLLD*FSGERN
Trigger: ATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGT...GGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTGCCCCTGTTGGGGGCTaGGCACCGACCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFAPVGG*APTFAQ
Trigger: TTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGC...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACACTGCAAAGGCTTaGCTCCCGAATGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINHTAKA*LPNVAF
Trigger: AAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTG...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR CCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINLCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTCGGGCTTCACCGCCTaGCCCTCTGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFSGFTA*PSVVTE
Trigger: CTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAATTACAAGCATAACATaGAGCTCTTGTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQAITSIT*SSCCTK
Trigger: TTTAGTGCAACAAGAGCTCCATGTTATGCTTGTAAT...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568295.5
CDS-3UTR CCA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCAATAAGATAATTTACTaGCTCACTGGTCAACCCCAG +
Preference number: 4 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSNKIIY*LTGQPQ
Trigger: CTGGGGTTGACCAGTGAGCCAGTAAATTATCTTATT...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTGTCCCATGGCCACTTaGCTGCCAGCGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFCPMAT*LPAHCP
Trigger: TGGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGCCGATCATCCGAGGTTaGAGATGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CCTKKWITNLLDCFSGERPIIRG*RWKLLL
Trigger: GAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGG...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR TCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTGAGCCTCATCTCTTCTaGCGGGACCTGCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFEPHLF*RDLPLH
Trigger: GTGCAGTGGCAGGTCCCGTCAGAAGAGATGAGGCTC...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp CATGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGAGGCGTTGACCCTCTaGAGGAAGGACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HGALVALKSGLQISSTALEALTL*RKDLRR
Trigger: CCTTCTCAAGTCCTTCCTGCAGAGGGTCAACGCCTC...TAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR GCA 90 bp TCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SRMSHLVDEKVLPLLEGLEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...CAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACAATTTACTGGCTCACTaGTCAACCCCAGGACCAATG +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINNLLAH*STPGPM
Trigger: CATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGAAGCTCCATTTTAGTTaGGACAGATTAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLKLHFS*DRLSTN
Trigger: GTTTGTGCTTAATCTGTCCCAACTAAAATGGAGCTT...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTGCCATGTGGGGGACATaGGAATTGACAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFAMWGT*ELTAAW
Trigger: CCAGGCAGCTGTCAATTCTCATGTCCCCCACATGGC...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACTGGCACTCTTTCAGTTaGCAGAGAGTGGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINWHSFS*QRVVRN
Trigger: GTTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCA...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp GGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGCTTCTGAAGACTGGGCATTTTaGTTCTTGTCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GKDTCRWWEAPPSHNEASEDWAF*FLSFSS
Trigger: AGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTC...AGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGGTGGTACTTGAGGGATaGCCGCTGCCTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMVVLEG*PLPALE
Trigger: TTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGACATGGAGCTCTTGTTaGACTAAAAAGTGGATTACA +
Preference number: 4 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVTWSSC*TKKWIT
Trigger: TGTAATCCACTTTTTAGTGCAACAAGAGCTCCATGT...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp CATGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTACCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HGALVALKSGLQISSTALPECRI*WTRRCF
Trigger: GAAGCACCTTCTCGTCCACCAAATGCGACATTCGGG...TAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR CCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGTCTTATTTGAGGACGTaGTGCAGCAGCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CCTKKWITNLLDCFSGERSYLRT*CSSLGV
Trigger: CACACCAAGGCTGCTGCACCACGTCCTCAAATAAGA...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTGAGGTAACGTCAAGATaGCCACCTTGGGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFEVTSR*PPWAMW
Trigger: CCACATGGCCCAAGGTGGGCATCTTGACGTTACCTC...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TTCCAAGTCAGGGTTTCCAGACTAGCTCAGGAGCTCCTTGTGTTTGCGGAAGTGATTACAAGCATAACATaGAGCTCTTGTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: FQVRVSRLAQELLVFAEVITSIT*SSCCTK
Trigger: TTTAGTGCAACAAGAGCTCCATGTTATGCTTGTAAT...CACTTCCGCAAACACAAGGAGCTCCTGAGCTAGTCTGGAAACCCTGACTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGCTGCTGACAGGTACCTaGGTATCCTCAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMLLTGT*VSSAQA
Trigger: AGCCTGAGCTGAGGATACCCAGGTACCTGTCAGCAG...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGACTGCATCCGGCCTGTaGGCCTTTCTTTTAATGTCT +
Preference number: 4 (lower is better)
Translates to: CCTKKWITNLLDCFSGERTASGL*AFLLMS
Trigger: AGACATTAAAAGAAAGGCCCACAGGCCGGATGCAGT...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp CATGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTACCTCAGAAAGGTCACTaGACTCGTCTTTTACCCGAT +
Preference number: 4 (lower is better)
Translates to: HGALVALKSGLQISSTALPQKGH*TRLLPD
Trigger: ATCGGGTAAAAGACGAGTTCAGTGACCTTTCTGAGG...TAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACAAGAGCTCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACATGAGAATTGACAGCTaGCTGGGCCATGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNMRIDS*LGHVPA
Trigger: GGCAGGCACATGGCCCAGGCAGCTGTCAATTCTCAT...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACTTTTCAGAGGCATCTTaGAAATGGTTAAGAACGAGC +
Preference number: 4 (lower is better)
Translates to: IIYELSGPESLSVCGKINFSEAS*KWLRTS
Trigger: GCTCGTTCTTAACCATTTGCAAGATGCCTCTGAAAA...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACCCAATGGGCCTATCATaGGGACTGCCTCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNPMGLS*GLPLSA
Trigger: TGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGG...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTGCAACCTCAGCCTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFATSAS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAGGCTGAGGTTGC...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTTTTCTTCTTCTCCTTaGTGGGCCTGCTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFFSSSP*WACCRH
Trigger: GTGACGACAGCAGGCCCATCAAGGAGAAGAAGAAAA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACGGGAAGAGGCCTTCCTaGATGTTGCTGTGGACATGT +
Preference number: 4 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNGKRPS*MLLWTC
Trigger: ACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCC...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAGCACACCAGGCTGCTaGCTTTCGCTTTTTACAGGT +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMSTPGC*LSLFTG
Trigger: ACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCT...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAGAGCACCACAGACCTaGCAAAGGCTTTCCACGTTT +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMRAPQT*QRLSTF
Trigger: AAACGTGGAAAGCCTTTGGCAGGTCTGTGGTGCTCT...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMKDTCR*WEAPPS
Trigger: AGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTT...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGTTGTGTTTGGTCATGTaGTACTTGAGGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMLCLVM*YLRDAR
Trigger: GCGGGCATCCCTCAAGTACCACATGACCAAACACAA...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR TCA 90 bp TGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGCCTCAGAAAGGTCACTaGACTCGTCTTTTACCCGAT +
Preference number: 4 (lower is better)
Translates to: WITNLLDCFSGERNQLFMPQKGH*TRLLPD
Trigger: ATCGGGTAAAAGACGAGTTCAGTGACCTTTCTGAGG...CATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR TCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTGGACATGTGTACATTaGGGTTGTGGGCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFWTCVH*GCGPSQ
Trigger: TTGAGAAGGCCCACAACCTCAATGTACACATGTCCA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACAGAGATGTCCAGAGTTaGCTGAGCCACTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNRDVQS*LSHFLV
Trigger: CACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCT...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR GCA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACGAGTCACTCAGCGTTTaGGGGAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNESLSV*GKINHW
Trigger: CCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR GCA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTTTTCAGAGGCATCTTaGAAATGGTTAAGAACGAGC +
Preference number: 4 (lower is better)
Translates to: KWITNLLDCFSGERNQLFFSEAS*KWLRTS
Trigger: GCTCGTTCTTAACCATTTGCAAGATGCCTCTGAAAA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS CCA 90 bp GGGACGACCCAGGAGACAGGAAGCGGCCCAGCCGGTCCCGCTTCATaGCAGCGGAGGACGCCAGCAGAATCCCGCGGGTGCTGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: GTTQETGSGPAGPAS*QRRTPAESRGCCPA
Trigger: GGCCGGGCAGCACCCGCGGGATTCTGCTGGCGTCCTCCGCTGCCATGAAGCGGGACCGGCTGGGCCGCTTCCTGTCTCCTGGGTCGTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443381.7
ENST00000568295.5
CDS CCA 90 bp GGGCCCTGCAAAGGGGCAGGCTTGGCTGAGGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGTCCGAAGGAGGCTGGGCCACATCCG +
Preference number: 5 (lower is better)
Translates to: GPCKGAGLAEVGSPT*APPRRCPKEAGPHP
Trigger: CGGATGTGGCCCAGCCTCCTTCGGACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGCAGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
ENST00000569426.1
CDS CCA 90 bp GGCTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGACAGTGACCCATaGCGAGAGCCCGGCCTGCTCCGTGGGAGACGGAGGCGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: GFSRKTSRGRGDSDP*REPGLLRGRRRRGA
Trigger: CGCCCCGCGCCTCCGTCTCCCACGGAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000563983.5
ENST00000568064.5
CDS CCA 90 bp GGGAAGCCCGACCTGGGCCCCACCGCGTCGCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGCAGGGTCTTGGTCTCAGCCCCAACT +
Preference number: 5 (lower is better)
Translates to: GKPDLGPTASLSEGG*ATSVLGRVLVSAPT
Trigger: AGTTGGGGCTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS TCA 90 bp CTGCGCAGGCTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGGCCTGCTCCTGCCTCGTCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: LRRLLEENFPWQRRQ*PMARARPAPASSAP
Trigger: CGGCGCGGACGAGGCAGGAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAGCCTGCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443381.7
ENST00000568295.5
CDS GCA 90 bp CCACCCTCCACCGGGGGAGGACTCACCCAGACACGCTCCCTCCTCTaGCCCTGTTGGGGGCTGGGCACCGACCTTTGCACAAGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: PPSTGGGLTQTRSLL*PCWGLGTDLCTRLP
Trigger: CGGAAGCCTTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGTGTCTGGGTGAGTCCTCCCCCGGTGGAGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563983.5
CDS TCA 90 bp CTGCGCAGGCTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGGCCTGCTCCGTGGGAGACGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LRRLLEENFPWQRRQ*PMARARPAPWETEA
Trigger: CGCCTCCGTCTCCCACGGAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAGCCTGCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000563983.5
ENST00000568064.5
CDS GCA 90 bp GGAAGTCCCGTACGAGCACGCGCTCCTCTGCGGATGGCCTCTCCATaGTCGCTCCAGGCGCCCTCTCGGAGATGCTGCGCAGGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GSPVRARAPLRMASP*SLQAPSRRCCAGFS
Trigger: CGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTCGTACGGGACTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 90 bp GGAGACAAGGTGGGGTCCTGGCGGACAGCCACACCAAGCAGGCGCTaGAAGTCCCGTACGAGCACGCGCTCCTCTGCGGATGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GDKVGSWRTATPSRR*KSRTSTRSSADGLS
Trigger: GGAGAGGCCATCCGCAGAGGAGCGCGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 90 bp CTGGGCCACATCCGTGCTGGGCAGGGTCTTGGTCTCAGCCCCAACTaGGGTCCCTGTCCCTCTACCCTGGGAGGTCTGAGGGGCATCCCC +
Preference number: 5 (lower is better)
Translates to: LGHIRAGQGLGLSPN*GPCPSTLGGLRGIP
Trigger: GGGGATGCCCCTCAGACCTCCCAGGGTAGAGGGACAGGGACCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 90 bp CGCTGTCCGAAGGAGGCTGGGCCACATCCGTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGGTCCCTGTCCCTCTACCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RCPKEAGPHPCWAGS*SQPQLGSLSLYPGR
Trigger: CCTCCCAGGGTAGAGGGACAGGGACCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS GCA 90 bp CACACCAAGCAGGCGCTGGAAGTCCCGTACGAGCACGCGCTCCTCTaGGGATGGCCTCTCCATGCTCGCTCCAGGCGCCCTCTCGGAGAT +
Preference number: 5 (lower is better)
Translates to: HTKQALEVPYEHALL*GWPLHARSRRPLGD
Trigger: ATCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GLRPRGERRPPEQTAGCPLVMWY*RDARCL
Trigger: CAGGCAGCGGGCATCCCTCAAGTACCACATGACCAA...GGGGCAGCCTGCTGTCTGCTCTGGAGGGCGGCGCTCACCTCTGGGTCGCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCCCGACAGGCAGGGCGAGAGGGCGAGCCTCGCGTaGCAGGCATCACCTCTCACA +
Preference number: 5 (lower is better)
Translates to: PPCNEEHAWSPGPDRQGERASLA*QASPLT
Trigger: TGTGAGAGGTGATGCCTGCAACGCGAGGCTCGCCCT...CTCGCCCTGCCTGTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS GCA 90 bp CTGCGGATGGCCTCTCCATGCTCGCTCCAGGCGCCCTCTCGGAGATaGTGCGCAGGCTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGAC +
Preference number: 5 (lower is better)
Translates to: LRMASPCSLQAPSRR*CAGFSRKTSRGRGD
Trigger: GTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS TCA 90 bp CTGTTGGGGGCTGGGCACCGACCCTGCAAAGGATCAGTGTGGCCATaGGCAGGACAAGCAGGCGGAGGTTCACAGCGCTCGTCGTACGGG +
Preference number: 5 (lower is better)
Translates to: LLGAGHRPCKGSVWP*AGQAGGGSQRSSYG
Trigger: CCCGTACGACGAGCGCTGTGAACCTCCGCCTGCTTGTCCTGCTCATGGCCACACTGATCCTTTGCAGGGTCGGTGCCCAGCCCCCAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561536.5
CDS GCA 90 bp CGGATGGCCTCTCCATGCTCGCTCCAGGCGCCCTCTCGGAGATGCTaGGCAGGCTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGACAGT +
Preference number: 5 (lower is better)
Translates to: RMASPCSLQAPSRRC*AGFSRKTSRGRGDS
Trigger: ACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 90 bp TGGGCGTGGCAGCTCTTGCAGACAAACGGAGACAAGGTGGGGTCCTaGCGGACAGCCACACCAAGCAGGCGCTGGAAGTCCCGTACGAGC +
Preference number: 5 (lower is better)
Translates to: WAWQLLQTNGDKVGS*RTATPSRRWKSRTS
Trigger: GCTCGTACGGGACTTCCAGCGCCTGCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGGCTGGGCACCGACCTTaGCACAAGGCTTCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: GMPAACTGTHRPHTAKAWAGHRP*HKASGD
Trigger: GTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAGC...CCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CACTGCGGAGTCCAGGCTGCTAGAGGTGCTCATCCTCACTGCCGTCCTCAGGTGGTGCTGGGCAGGGTCTaGGTCTCAGCCCCAACTGGG +
Preference number: 5 (lower is better)
Translates to: HCGVQAARGAHPHCRPQVVLGRV*VSAPTG
Trigger: CCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCAC...CACCTGAGGACGGCAGTGAGGATGAGCACCTCTAGCAGCCTGGACTCCGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCCCTGCAAAGGGGCAGGCTaGGCTGAGGTGGGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: RWWEAPPCNEEHAWSPGPCKGAG*AEVGSP
Trigger: CGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGCA...GGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CAA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGTCGATCATGAAAACCTaGTTGCAGCCAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKSIMKT*LQPGWG
Trigger: CCCCCACCCTGGCTGCAACAAGGTTTTCATGATCGA...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: RPQVGSGFTAWPSVVTEGLVMWY*RDARCL
Trigger: CAGGCAGCGGGCATCCCTCAAGTACCACATGACCAA...CCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCGTGGTGCAGCAGCCTaGGTGTGGGTGCTCGAAGTC +
Preference number: 5 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLRGAAA*VWVLEV
Trigger: GACTTCGAGCACCCACACCAAGGCTGCTGCACCACG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS GCA 90 bp TCAGAGGAACAGGTGATGCTCCCTGGGAAGCACACGGTGAGTAGCTaGCACCCCAGCATTCCTCAACCCCGCCTCCACTGCAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SEEQVMLPGKHTVSS*HPSIPQPRLHCREP
Trigger: GGGCTCCCTGCAGTGGAGGCGGGGTTGAGGAATGCTGGGGTGGCAGCTACTCACCGTGTGCTTCCCAGGGAGCATCACCTGTTCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS CCA 90 bp GGTAGAACTGGGCGTGGCAGCTCTTGCAGACAAACGGAGACAAGGTaGGGTCCTGGCGGACAGCCACACCAAGCAGGCGCTGGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: GRTGRGSSCRQTETR*GPGGQPHQAGAGSP
Trigger: GGGACTTCCAGCGCCTGCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCAGTTCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQLVMWY*RDARCL
Trigger: CAGGCAGCGGGCATCCCTCAAGTACCACATGACCAA...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 90 bp ATCAGATCCACTGCAGAGAGTCAACAGAGATGTCAGATCCACGGCTaGTCGGCACCCAGCCCACCCTCCACCGGGGGAGGACTCACCCAG +
Preference number: 5 (lower is better)
Translates to: IRSTAESQQRCQIHG*SAPSPPSTGGGLTQ
Trigger: CTGGGTGAGTCCTCCCCCGGTGGAGGGTGGGCTGGGTGCCGACCAGCCGTGGATCTGACATCTCTGTTGACTCTCTGCAGTGGATCTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563983.5
CDS CCA 90 bp ATCAGATCCACCAGACACGCTCCCTCCTCTGCCCCTGTTGGGGGCTaGGCACCGACCCTGCAAAGGATCAGTGTGGCCATGAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: IRSTRHAPSSAPVGG*APTLQRISVAMSRT
Trigger: TGTCCTGCTCATGGCCACACTGATCCTTTGCAGGGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGTGTCTGGTGGATCTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561536.5
CDS CCA 90 bp GGATGTGATCAGATCCACCAGACACGCTCCCTCCTCTGCCCCTGTTaGGGGCTGGGCACCGACCCTGCAAAGGATCAGTGTGGCCATGAG +
Preference number: 5 (lower is better)
Translates to: GCDQIHQTRSLLCPC*GLGTDPAKDQCGHE
Trigger: CTCATGGCCACACTGATCCTTTGCAGGGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGTGTCTGGTGGATCTGATCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561536.5
CDS-3UTR CAA 90 bp ATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACGCTGGGCACCGACCTTaGCACAAGGCTTCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: MWYLRDARCLHWNPQTSHAGHRP*HKASGD
Trigger: GTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAGC...GTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCAGCTTGTCCCATGGCCACTaGACTGCCAGCGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: PLPDLLVVLLDVLLHAVSLSHGH*TASALS
Trigger: GGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACAA...GCTGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTTGGGCCATGTGGGGGTGCTGGGCAGGGTCTaGGTCTCAGCCCCAACTGGG +
Preference number: 5 (lower is better)
Translates to: LLTRGRGNVKMPTLGHVGVLGRV*VSAPTG
Trigger: CCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCAC...CCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAGTGCTGGGCAGGGTCTaGGTCTCAGCCCCAACTGGG +
Preference number: 5 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTVLGRV*VSAPTG
Trigger: CCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCAC...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCGTGCTGGGCAGGGTCTaGGTCTCAGCCCCAACTGGG +
Preference number: 5 (lower is better)
Translates to: VYIEVVGLLKPPATLVTGVLGRV*VSAPTG
Trigger: CCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCAC...GCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CTTCTCACACGTGGCAGAGGTAACGTCAAGATGCCCACCTTGGGCCATGTGGGGTGCAAAGGGGCAGGCTaGGCTGAGGTGGGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: LLTRGRGNVKMPTLGHVGCKGAG*AEVGSP
Trigger: CGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGCA...CCCCACATGGCCCAAGGTGGGCATCTTGACGTTACCTCTGCCACGTGTGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGTATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: SGFTAWPSVVTEGLGGPGMCTLR*WAFSNR
Trigger: GCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT...ACCTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTGCCTGAGCCACTTCTaGGTGTTGCAGACCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLCLSHF*VLQTSG
Trigger: GCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCA...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGAAAGGCTTTCCACGTTaGTGCAGCAATCCTCGAGTG +
Preference number: 5 (lower is better)
Translates to: QHQGRAAPSDPPMRVHTKKGFPR*CSNPRV
Trigger: CACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTT...CTTCGTGTGCACCCGCATGGGAGGGTCGGAGGGTGCTGCCCGCCCTTGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCGGCCATTCTCAGGGTaGGTCTCCTGCGGTTTACAG +
Preference number: 5 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLRPFSG*VSCGLQ
Trigger: CTGTAAACCGCAGGAGACCAACCCTGAGAATGGCCG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS CCA 90 bp CTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATGGTaGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LGTRPCSPGKDTCRW*EAPPCNEEHAWSPG
Trigger: GCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS CCA 90 bp CGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTAGATaGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: RLGTRPCSPGKDTCR*WEAPPCNEEHAWSP
Trigger: GGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS-3UTR CAA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACGCTGGGCACCGACCTTaGCACAAGGCTTCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: VSALCLVMWYLRDARCLHAGHRP*HKASGD
Trigger: GTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAGC...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGTTGTCCCATGGCCACTaGACTGCCAGCGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: LEGCPLPALEPTDLTLQRLSHGH*TASALS
Trigger: GGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACAA...CCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGCAAAGGGGCAGGCTaGGCTGAGGTGGGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: VSALCLVMWYLRDARCLHCKGAG*AEVGSP
Trigger: CGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGCA...GTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp ACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGTGCTTCCGCTGCTaGAAGGTTTGTCCACATTCG +
Preference number: 5 (lower is better)
Translates to: TAVLRWVRASPPGPLWSQRCFRC*KVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCT...CTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACATCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: HCRPQVGSGFTAWPSVVTSRMSH*VDEKVL
Trigger: AAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA...TGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACCCACCTGAGGACGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGCAGAGGAAGGCTACTaGAGCCGGACACCAAGCCCG +
Preference number: 5 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHAEEGY*SRTPSP
Trigger: CGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGCAGAGGAAGGCTACTaGAGCCGGACACCAAGCCCG +
Preference number: 5 (lower is better)
Translates to: LKPPATLVTGKVQLSLSLAEEGY*SRTPSP
Trigger: CGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGC...AAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS GCA 90 bp CACCAAGCCGTGCAGGCACTGGGGGCTGGATGTGATCAGATCCACTaGAGAGAGTCAACAGAGATGTCAGATCCACGGCTGGTCGGCACC +
Preference number: 5 (lower is better)
Translates to: HQAVQALGAGCDQIH*RESTEMSDPRLVGT
Trigger: GGTGCCGACCAGCCGTGGATCTGACATCTCTGTTGACTCTCTGCAGTGGATCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563983.5
CDS-3UTR CAA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTGGGCGTGGCAGCTCTaGCAGACAAACGGAGACAAG +
Preference number: 5 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLWAWQL*QTNGDK
Trigger: CTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCA...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACTTGTCCCATGGCCACTaGACTGCCAGCGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHLSHGH*TASALS
Trigger: GGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACAA...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp GGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTGGCCCAGGTTCTTCAGACTTCTaGGCTTCTTTGCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: GSGFTAWPSVVTEGLGGPGSSDF*ASLLSL
Trigger: GAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACC...TGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCAGGCGGTGAAGCCCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGCCGCTCCCGGACCTCCTCGTGGTGCTCCTTGATGTGCTTCTTCATGCCGTCATCCTCGTGGTGCTCCTaGATGTGCTTCTTCATGCCG +
Preference number: 5 (lower is better)
Translates to: GRSRTSSWCSLMCFFMPSSSWCS*MCFFMP
Trigger: CGGCATGAAGAAGCACATCAAGGAGCACCACGAGGA...TGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCCTGGCCTCCTACCTTCACACTGCAAAGGCTaGGCTCCCGAATGTCGCATT +
Preference number: 5 (lower is better)
Translates to: GRGAAALVWVLEVPGLLPSHCKG*APECRI
Trigger: AATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGA...AGGTAGGAGGCCAGGGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp ATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: MPAACTGTHRPHTAKAWLLVMWY*RDARCL
Trigger: CAGGCAGCGGGCATCCCTCAAGTACCACATGACCAA...GAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGCAGAGGAAGGCTACTaGAGCCGGACACCAAGCCCG +
Preference number: 5 (lower is better)
Translates to: VFGHVVLEGCPLPALEPTAEEGY*SRTPSP
Trigger: CGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGC...TGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTGCCTGAGCCACTTCTaGGTGTTGCAGACCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLCLSHF*VLQTSG
Trigger: GCCTGAGGTCTGCAACACCAAGAAGTGGCTCAGGCA...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTGCTGGGCACCGACCTTaGCACAAGGCTTCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSAGHRP*HKASGD
Trigger: GTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAGC...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGTGCTGGGCAGGGTCTaGGTCTCAGCCCCAACTGGG +
Preference number: 5 (lower is better)
Translates to: CLCSTDEQYPLASPATFPVLGRV*VSAPTG
Trigger: CCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCAC...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTCCCGATCATCCGAGGTaGAAGATGGAAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASPDHPR*KMEAAS
Trigger: AGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGG...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CCCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCCCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGAT +
Preference number: 5 (lower is better)
Translates to: PPSQHLWVPPDGKGCLCLPLLEG*STFVTD
Trigger: ATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGG...GAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGCTCCCGATCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: PLPALEPTDLTLQRLGSRSRMSH*VDEKVL
Trigger: AAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA...TCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGCTTGGTCACACTGCAAAGGCTaGGCTCCCGAATGTCGCATT +
Preference number: 5 (lower is better)
Translates to: GMPAACTGTHRPHTAKAWSHCKG*APECRI
Trigger: AATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGA...CCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASMCTLR*WAFSNR
Trigger: GCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCCCGACTCCGATCATCCGAGGTaGAAGATGGAAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: WWEAPPCNEEHAWSPGPDSDHPR*KMEAAS
Trigger: AGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGA...GTCGGGGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CAA 90 bp TGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCATCCAGCAAGAAGGCCTaGCAGCTGGAGCTGGTATCC +
Preference number: 5 (lower is better)
Translates to: CTLRLWAFSNRRPHWSQASSKKA*QLELVS
Trigger: GGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGGA...TGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTTCCAGCAAGAAGGCCTaGCAGCTGGAGCTGGTATCC +
Preference number: 5 (lower is better)
Translates to: PATLVTGKVQLSLSLVFGSSKKA*QLELVS
Trigger: GGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGGA...ACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGCAAAGGGGCAGGCTaGGCTGAGGTGGGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPCKGAG*AEVGSP
Trigger: CGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGCA...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGTGCAAAGGGGCAGGCTaGGCTGAGGTGGGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRCKGAG*AEVGSP
Trigger: CGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGCA...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACAATCATGAAAACCTTGTaGCAGCCAGGGTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: HVVLEGCPLPALEPTDLTIMKTL*QPGWGQ
Trigger: CTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGAT...TGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACTGCAAAGGAGGTGCTTCCGCTGCTaGAAGGTTTGTCCACATTCG +
Preference number: 5 (lower is better)
Translates to: LEGCPLPALEPTDLTLQRRCFRC*KVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCT...CCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGCAGGGCCTTGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATCACACTGCAAAGGCTaGGCTCCCGAATGTCGCATT +
Preference number: 5 (lower is better)
Translates to: GRALSWVCVSGCTMDMCTSHCKG*APECRI
Trigger: AATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGA...TGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGGACAAGGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CCCCATCTCAGCACCTCTGGGTCCCGCCAGATGGGAAGGGTTGTCTGTGCCTCTATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: PHLSTSGSRQMGRVVCASMCTLR*WAFSNR
Trigger: GCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT...AGAGGCACAGACAACCCTTCCCATCTGGCGGGACCCAGAGGTGCTGAGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp AATTTACTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCGTGGTGCAGCAGCCTaGGTGTGGGTGCTCGAAGTC +
Preference number: 5 (lower is better)
Translates to: NLLAHWSTPGPMGLSWGLRGAAA*VWVLEV
Trigger: GACTTCGAGCACCCACACCAAGGCTGCTGCACCACG...CAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAGTAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS GCA 90 bp GCTCTTCCTCCAAGGTCAGGAACAAGATACGGATTCTCTCACCACTaGTCTCAGGGCAGCACTGGAGGCCCTAGCCAGAGTAACTGGGCA +
Preference number: 5 (lower is better)
Translates to: ALPPRSGTRYGFSHH*SQGSTGGPSQSNWA
Trigger: TGCCCAGTTACTCTGGCTAGGGCCTCCAGTGCTGCCCTGAGAGCAGTGGTGAGAGAATCCGTATCTTGTTCCTGACCTTGGAGGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS-3UTR CAA 90 bp CTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGTGGGCGTGGCAGCTCTaGCAGACAAACGGAGACAAG +
Preference number: 5 (lower is better)
Translates to: LTLQRLGSRMSHLVDEKVWAWQL*QTNGDK
Trigger: CTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCA...CACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGCTGGGCACCGACCTTaGCACAAGGCTTCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLAGHRP*HKASGD
Trigger: GTCGCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAGC...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGTCCAGCAAGAAGGCCTaGCAGCTGGAGCTGGTATCC +
Preference number: 5 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQSSKKA*QLELVS
Trigger: GGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGGA...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAATCCTCGTGGTGCTCCTaGATGTGCTTCTTCATGCCG +
Preference number: 5 (lower is better)
Translates to: HAAEAQMRRAALFRGILQSSWCS*MCFFMP
Trigger: CGGCATGAAGAAGCACATCAAGGAGCACCACGAGGA...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACAATCATGAAAACCTTGTaGCAGCCAGGGTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SMKTRPSGKRPSCMLLWTIMKTL*QPGWGQ
Trigger: CTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGAT...TGTCCACAGCAACATGCAGGAAGGCCTCTTCCCTGATGGCCGCGTCTTCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGATCATGAAAACCTTGTaGCAGCCAGGGTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QRLGSRMSHLVDEKVLPLIMKTL*QPGWGQ
Trigger: CTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGAT...CAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGATCATGAAAACCTTGTaGCAGCCAGGGTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SALCLVMWYLRDARCLHWIMKTL*QPGWGQ
Trigger: CTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGAT...CCAGTGCAGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCCCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGAT +
Preference number: 5 (lower is better)
Translates to: WAFSNRRPHWSQAKSSSVPLLEG*STFVTD
Trigger: ATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGG...GACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLVSALC*VMWYLR
Trigger: CCTCAAGTACCACATGACCAAACACAAGGCTGAGAC...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: WAFSNRRPHWSQAKSSSVVSALC*VMWYLR
Trigger: CCTCAAGTACCACATGACCAAACACAAGGCTGAGAC...GACTGAGCTGGACTTTGCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGCAGAGATGTCCAGAGTaGCCTGAGCCACTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQQRCPE*PEPLLG
Trigger: ACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCTG...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCCTGGCACTCTTTCAGTaGACAGAGAGTGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASLALFQ*TESGKK
Trigger: TTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCAG...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGCCCGCCTCCCTTTTAATGTCTTATTaGAGGACGTGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HWSQSRGRLLEPDTKPASLLMSY*RTWCSS
Trigger: GCTGCTGCACCACGTCCTCAAATAAGACATTAAAAG...GGAGGCGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCACACAGATCCTGCGGACCTaGGCTTTCCACTCCGCTCGC +
Preference number: 5 (lower is better)
Translates to: LVDEKVLPLLEGLSTFVTQILRT*AFHSAR
Trigger: GCGAGCGGAGTGGAAAGCCAAGGTCCGCAGGATCTG...TGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS-3UTR CAA 90 bp GTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAACCCACAGACCTCACACCTTCCGATCATCCGAGGTaGAAGATGGAAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: VVLEGCPLPALEPTDLTPSDHPR*KMEAAS
Trigger: AGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGA...AGGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGCATCCCTCAAGTACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CAA 90 bp GATGAGCTTCACGTGGCGCTGCAGGTAGCGGTCGATCATGAAAACCTTGTTGCATCCAGCAAGAAGGCCTaGCAGCTGGAGCTGGTATCC +
Preference number: 5 (lower is better)
Translates to: DELHVALQVAVDHENLVASSKKA*QLELVS
Trigger: GGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGGA...TGCAACAAGGTTTTCATGATCGACCGCTACCTGCAGCGCCACGTGAAGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGTTGTCCCATGGCCACTaGACTGCCAGCGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRLSHGH*TASALS
Trigger: GGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACAA...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGTGCTGGGCAGGGTCTaGGTCTCAGCCCCAACTGGG +
Preference number: 5 (lower is better)
Translates to: RLSFLGKAQRTRPKTGHFVLGRV*VSAPTG
Trigger: CCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCAC...AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR CAA 90 bp TCATGCCGTCAGCGCCTCGGTACACGGCCGTGCAGCCCTGGTAAGGACACTTGTGGTTCTTCAGACTTCTaGGCTTCTTTGCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: SCRQRLGTRPCSPGKDTCGSSDF*ASLLSL
Trigger: GAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACC...ACAAGTGTCCTTACCAGGGCTGCACGGCCGTGTACCGAGGCGCTGACGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTCCTCGTGGTGCTCCTaGATGTGCTTCTTCATGCCG +
Preference number: 5 (lower is better)
Translates to: SSSVSALCLVMWYLRDARSSWCS*MCFFMP
Trigger: CGGCATGAAGAAGCACATCAAGGAGCACCACGAGGA...GCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGCCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGAT +
Preference number: 5 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQPLLEG*STFVTD
Trigger: ATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGG...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CACGCTGCTGAGGCACAAATGCGGAGGGCCGCTCTTTTCAGAGGCATCTTGCAATCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: HAAEAQMRRAALFRGILQSRMSH*VDEKVL
Trigger: AAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA...TTGCAAGATGCCTCTGAAAAGAGCGGCCCTCCGCATTTGTGCCTCAGCAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CCACAGACCTCACACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGGACGTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: PQTSHCKGLAPECRIWWTSRMSH*VDEKVL
Trigger: AAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA...CGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCTTGGTCATGTGGTACTaGAGGGATGCCCGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: CSTDEQYPLASPATFPAVLVMWY*RDARCL
Trigger: CAGGCAGCGGGCATCCCTCAAGTACCACATGACCAA...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCATCATGAAAACCTTGTaGCAGCCAGGGTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: CSTDEQYPLASPATFPAVIMKTL*QPGWGQ
Trigger: CTGCCCCCACCCTGGCTGCAACAAGGTTTTCATGAT...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAAGCAGAGGAAGGCTACTaGAGCCGGACACCAAGCCCG +
Preference number: 5 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKAEEGY*SRTPSP
Trigger: CGGGCTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGC...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CTGGCTCACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCCTTTTAATGTCTTATTaGAGGACGTGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LAHWSTPGPMGLSWGLPLLLMSY*RTWCSS
Trigger: GCTGCTGCACCACGTCCTCAAATAAGACATTAAAAG...GAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS GCA 90 bp TCTGGCAAGTCCCTGAGGGACCAGCAAATGCAGCAGCTTCCAGTGTaGGTCTATCGGAGACTTAAAGAGAGAGACGCACTTGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SGKSLRDQQMQQLPV*VYRRLKERDALVVP
Trigger: AGGAACCACAAGTGCGTCTCTCTCTTTAAGTCTCCGATAGACGCACACTGGAAGCTGCTGCATTTGCTGGTCCCTCAGGGACTTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS-3UTR CAA 90 bp GCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATTGGGCGTGGCAGCTCTaGCAGACAAACGGAGACAAG +
Preference number: 5 (lower is better)
Translates to: AKSSSVSALCLVMWYLRDWAWQL*QTNGDK
Trigger: CTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCA...ATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTGCTTCTTGGGCGTGGCAGCTCTaGCAGACAAACGGAGACAAG +
Preference number: 5 (lower is better)
Translates to: SFLGKAQRTRPKTGHFASWAWQL*QTNGDK
Trigger: CTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCA...AGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCCCGATCATCCGAGGTaGAAGATGGAAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: ESLSVCGKINHWSQSRGRPDHPR*KMEAAS
Trigger: AGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGG...CCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp GTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCATGCATGGAGCCCCGGCCCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATC +
Preference number: 5 (lower is better)
Translates to: VDGGKLLPAMKSMHGAPARRLGI*LLVIFI
Trigger: GATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCG...GGCCGGGGCTCCATGCATGCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CAA 90 bp GTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACTGGTCACAGGCGGTTCTTCAGACTTCTaGGCTTCTTTGCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: VYIEVVGLLKPPATLVTGGSSDF*ASLLSL
Trigger: GAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACC...GCCTGTGACCAGTGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGTCCTCGTGGTGCTCCTaGATGTGCTTCTTCATGCCG +
Preference number: 5 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKSSWCS*MCFFMP
Trigger: CGGCATGAAGAAGCACATCAAGGAGCACCACGAGGA...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCTCGATCATGAAAACCTaGTTGCAGCCAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: KSSSVSALCLVMWYLRDASIMKT*LQPGWG
Trigger: CCCCCACCCTGGCTGCAACAAGGTTTTCATGATCGA...GGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCTCAAACCGCCGGCCACACCGCTGCTTGAAGGTTaGTCCACATTCGTCACAGAT +
Preference number: 5 (lower is better)
Translates to: HHGHVYIEVVGLLKPPATPLLEG*STFVTD
Trigger: ATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGG...TGTGGCCGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TGCCTCTGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAAGGTGCTTCCGCTGCTaGAAGGTTTGTCCACATTCG +
Preference number: 5 (lower is better)
Translates to: CLCSTDEQYPLASPATFPRCFRC*KVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCT...TGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCAGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TCCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGAGGTGCTTCCGCTGCTaGAAGGTTTGTCCACATTCG +
Preference number: 5 (lower is better)
Translates to: SRMSHLVDEKVLPLLEGLRCFRC*KVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCT...CAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCTTGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: GLCQRVHHGHVYIEVVGLVSALC*VMWYLR
Trigger: CCTCAAGTACCACATGACCAAACACAAGGCTGAGAC...AAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTCTCACAACGAAGATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: ALVRTLVDGGKLLPLTTKMCTLR*WAFSNR
Trigger: GCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT...CTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCGAGTCACTCAGCGTTaGCGGGAAAATAAACCACTG +
Preference number: 5 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTRVTQR*RENKPL
Trigger: CAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp ACTGGTCAACCCCAGGACCAATGGGCCTATCATGGGGACTGCCTCTCTCTGCACGCAGTCTGTAGCCATTaGTCACTATGTCTTTACCTC +
Preference number: 5 (lower is better)
Translates to: TGQPQDQWAYHGDCLSLHAVCSH*SLCLYL
Trigger: GAGGTAAAGACATAGTGACAAATGGCTACAGACTGC...GTGCAGAGAGAGGCAGTCCCCATGATAGGCCCATTGGTCCTGGGGTTGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCGATGAGCAGTATCCCTaGGCATCACCTGCTACCTTT +
Preference number: 5 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTDEQYP*ASPATF
Trigger: AAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATC...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp AGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTACTTGAAGCTGGTCCAGCAGAGATGTCCAGAGTaGCCTGAGCCACTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: REEAFLHVAVDMYLKLVQQRCPE*PEPLLG
Trigger: ACCAAGAAGTGGCTCAGGCAACTCTGGACATCTCTG...CTGGACCAGCTTCAAGTACATGTCCACAGCAACATGCAGGAAGGCCTCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGCTGGCACTCTTTCAGTaGACAGAGAGTGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: RPRVTQRLRENKPLVPEQLALFQ*TESGKK
Trigger: TTTCTTACCACTCTCTGTCAACTGAAAGAGTGCCAG...CTGCTCTGGGACCAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp GATCAGCACACCAGGCTGCTGCCTTTCGCTTTTTACAGGTACCTCCACCCACAGAAAGGCTTTCCACGTTaGTGCAGCAATCCTCGAGTG +
Preference number: 5 (lower is better)
Translates to: DQHTRLLPFAFYRYLHPQKGFPR*CSNPRV
Trigger: CACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTT...CTGTGGGTGGAGGTACCTGTAAAAAGCGAAAGGCAGCAGCCTGGTGTGCTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS CCA 90 bp ACTCACACTTACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTGGTaGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCG +
Preference number: 5 (lower is better)
Translates to: THTYCKGLAPECRIW*TRRCFRCLKVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTAAGTGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS CCA 90 bp CTGACTCACACTTACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: LTHTYCKGLAPECRI*WTRRCFRCLKVCPH
Trigger: ATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTAAGTGTGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS-3UTR CAA 90 bp CCTGTGAGTTTGCCTGTTTTCTCTCTAGGGCAACCCCGTGGAACTGATAACAAATGGGCGTGGCAGCTCTaGCAGACAAACGGAGACAAG +
Preference number: 5 (lower is better)
Translates to: PVSLPVFSLGQPRGTDNKWAWQL*QTNGDK
Trigger: CTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCA...TTTGTTATCAGTTCCACGGGGTTGCCCTAGAGAGAAAACAGGCAAACTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGGTTCTTCAGACTTCTaGGCTTCTTTGCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPGSSDF*ASLLSL
Trigger: GAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGTCCTCGTGGTGCTCCTaGATGTGCTTCTTCATGCCG +
Preference number: 5 (lower is better)
Translates to: SFNVLFEDVVQQPWCGCSSSWCS*MCFFMP
Trigger: CGGCATGAAGAAGCACATCAAGGAGCACCACGAGGA...CGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTATCGATCATGAAAACCTaGTTGCAGCCAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TTDLPKAFHVCAAILECLSIMKT*LQPGWG
Trigger: CCCCCACCCTGGCTGCAACAAGGTTTTCATGATCGA...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CGGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTAGGTGCTTCCGCTGCTaGAAGGTTTGTCCACATTCG +
Preference number: 5 (lower is better)
Translates to: RPVGLSFNVLFEDVVQQPRCFRC*KVCPHS
Trigger: CGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCT...AGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp AAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCAAGTCACACTGCAAAGGCTaGGCTCCCGAATGTCGCATT +
Preference number: 5 (lower is better)
Translates to: KINHWSQSRGRLLEPDTKSHCKG*APECRI
Trigger: AATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGA...CTTGGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568295.5
CDS-3UTR CAA 90 bp AATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTGGTGTGGGTGCTCGAAGTCCGTCTCAGCCTTGTGTTaGGTCATGTGGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: NVLFEDVVQQPWCGCSKSVSALC*VMWYLR
Trigger: CCTCAAGTACCACATGACCAAACACAAGGCTGAGAC...GGACTTCGAGCACCCACACCAAGGCTGCTGCACCACGTCCTCAAATAAGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp AAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGTTTCTCGAGTCACTCAGCGTTaGCGGGAAAATAAACCACTG +
Preference number: 5 (lower is better)
Translates to: KNVPAQHADYGGHTSPVSRVTQR*RENKPL
Trigger: CAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCG...AGAAACAGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp CTGCCAAAGAATGTTCCGGCACAGCATGCAGACTATGGGGGACACACCAGCCCTGCAGTCTGTAGCCATTaGTCACTATGTCTTTACCTC +
Preference number: 5 (lower is better)
Translates to: LPKNVPAQHADYGGHTSPAVCSH*SLCLYL
Trigger: GAGGTAAAGACATAGTGACAAATGGCTACAGACTGC...AGGGCTGGTGTGTCCCCCATAGTCTGCATGCTGTGCCGGAACATTCTTTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp TGCTCCACAGATGAGCAGTATCCCTTGGCATCACCTGCTACCTTTCCAGCAGTCCTTTTCTTCTTCTCCTaGATGGGCCTGCTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: CSTDEQYPLASPATFPAVLFFFS*MGLLSS
Trigger: TGACGACAGCAGGCCCATCAAGGAGAAGAAGAAAAG...GACTGCTGGAAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATCTGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACTCCAGCAAGAAGGCCTaGCAGCTGGAGCTGGTATCC +
Preference number: 5 (lower is better)
Translates to: IIYELSGPESLSVCGKINSSKKA*QLELVS
Trigger: GGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGGA...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GCCCTGGTAAGGACACTTGTAGATGGTGGGAAGCTCCTCCCTGCAATGAAGAGCGGTTCTTCAGACTTCTaGGCTTCTTTGCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: ALVRTLVDGGKLLPAMKSGSSDF*ASLLSL
Trigger: GAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACC...GCTCTTCATTGCAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563541.1
CDS-3UTR CAA 90 bp TCTTCTTACCAGAGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGTCGATCATGAAAACCTaGTTGCAGCCAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SSYQRLSFLGKAQRTRPKSIMKT*LQPGWG
Trigger: CCCCCACCCTGGCTGCAACAAGGTTTTCATGATCGA...CTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCTGGTAAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTTTCGATCATGAAAACCTaGTTGCAGCCAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: RLSFLGKAQRTRPKTGHFSIMKT*LQPGWG
Trigger: CCCCCACCCTGGCTGCAACAAGGTTTTCATGATCGA...AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562530.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGCGAGTCACTCAGCGTTaGCGGGAAAATAAACCACTG +
Preference number: 5 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRRVTQR*RENKPL
Trigger: CAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCG...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCTCCGATCATCCGAGGTaGAAGATGGAAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: KSSSVSALCLVMWYLRDASDHPR*KMEAAS
Trigger: AGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGA...GGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGTCCGATCATCCGAGGTaGAAGATGGAAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QAKSSSVSALCLVMWYLRSDHPR*KMEAAS
Trigger: AGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGA...CCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 90 bp AACGACCTTACGCTAGGAAAAAGCTCAGAATCCACTCTCTCAAAATaGGTCAGCTTGATTCCAAGCTCAAGCCACCCAGGCAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: NDLTLGKSSESTLSK*VSLIPSSSHPGRAS
Trigger: TGAAGCCCTGCCTGGGTGGCTTGAGCTTGGAATCAAGCTGACCCATTTTGAGAGAGTGGATTCTGAGCTTTTTCCTAGCGTAAGGTCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS-3UTR CAA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATC +
Preference number: 5 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTRRLGI*LLVIFI
Trigger: GATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp CTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATC +
Preference number: 5 (lower is better)
Translates to: LSLSLVFGHVVLEGCPLPRRLGI*LLVIFI
Trigger: GATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCG...AGGCAGCGGGCATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTCGAGTCACTCAGCGTTaGCGGGAAAATAAACCACTG +
Preference number: 5 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLRVTQR*RENKPL
Trigger: CAGTGGTTTATTTTCCCGCAAACGCTGAGTGACTCG...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp GGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTACTTGAGCCGGACACCCTTTTCAGAGGCATCTaGCAAATGGTTAAGAACGAG +
Preference number: 5 (lower is better)
Translates to: GKINHWSQSRGRLLEPDTLFRGI*QMVKNE
Trigger: CTCGTTCTTAACCATTTGCAAGATGCCTCTGAAAAG...GGTGTCCGGCTCAAGTAGCCTTCCTCTGCTCTGGGACCAGTGGTTTATTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp GGCCTGTGGGCCTTTCTTTTAATGTCTTATTTGAGGACGTGGTGCAGCAGCCTTCTTTTCTTCTTCTCCTaGATGGGCCTGCTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: GLWAFLLMSYLRTWCSSLLFFFS*MGLLSS
Trigger: TGACGACAGCAGGCCCATCAAGGAGAAGAAGAAAAG...AAGGCTGCTGCACCACGTCCTCAAATAAGACATTAAAAGAAAGGCCCACAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTTGCAAAGGGGCAGGCTaGGCTGAGGTGGGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: KWITNLLDCFSGERNQLFCKGAG*AEVGSP
Trigger: CGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTTGCA...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGCGGCCATTCTCAGGGTaGGTCTCCTGCGGTTTACAG +
Preference number: 5 (lower is better)
Translates to: CCTKKWITNLLDCFSGERRPFSG*VSCGLQ
Trigger: CTGTAAACCGCAGGAGACCAACCCTGAGAATGGCCG...CCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTTTTTAGTGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS TCA 90 bp ATAAAACCTCTACATGAAACCCACAGCAGACACCACGCTCAACTGTaGAGGACTGAAAGCTCTTCCTCCAAGGTCAGGAACAAGATACGG +
Preference number: 5 (lower is better)
Translates to: IKPLHETHSRHHAQL*RTESSSSKVRNKIR
Trigger: CCGTATCTTGTTCCTGACCTTGGAGGAAGAGCTTTCAGTCCTTCACAGTTGAGCGTGGTGTCTGCTGTGGGTTTCATGTAGAGGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS-3UTR CAA 90 bp ATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACGATGAGCAGTATCCCTaGGCATCACCTGCTACCTTT +
Preference number: 5 (lower is better)
Translates to: IIYELSGPESLSVCGKINDEQYP*ASPATF
Trigger: AAAGGTAGCAGGTGATGCCAAGGGATACTGCTCATC...GTTTATTTTCCCGCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTGTCAAGATGCCCACCTaGGGCCATGTGGGGGACATG +
Preference number: 5 (lower is better)
Translates to: KWITNLLDCFSGERNQLFVKMPT*GHVGDM
Trigger: CATGTCCCCCACATGGCCCAAGGTGGGCATCTTGAC...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp ACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGTTTACTTTTCAGAGGCATCTaGCAAATGGTTAAGAACGAG +
Preference number: 5 (lower is better)
Translates to: TTDLPKAFHVCAAILECLLFRGI*QMVKNE
Trigger: CTCGTTCTTAACCATTTGCAAGATGCCTCTGAAAAG...TAAACACTCGAGGATTGCTGCACAAACGTGGAAAGCCTTTGGCAGGTCTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289816.9
ENST00000443381.7
CDS-3UTR CAA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACTTGTCCCATGGCCACTaGACTGCCAGCGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNLSHGH*TASALS
Trigger: GGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACAA...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp GGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATC +
Preference number: 5 (lower is better)
Translates to: GKESIIYELSGPESLSVCRRLGI*LLVIFI
Trigger: GATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCG...GCAAACGCTGAGTGACTCGGGGCCGGACAGTTCATAAATAATTGATTCCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp TCTTCTTACCAGAGACTTTCCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATC +
Preference number: 5 (lower is better)
Translates to: SSYQRLSFLGKAQRTRPKRRLGI*LLVIFI
Trigger: GATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCG...CTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCTGGTAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568295.5
CDS-3UTR CAA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNSRMSH*VDEKVL
Trigger: AAGCACCTTCTCGTCCACCAAATGCGACATTCGGGA...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp ATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTATGAACATGTGTACATTGAGGTaGTGGGCCTTCTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: ITNLLDCFSGERNQLFMNMCTLR*WAFSNR
Trigger: GCGGTTTGAGAAGGCCCACAACCTCAATGTACACAT...GTTCATAAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTGGTTCTTCAGACTTCTaGGCTTCTTTGCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: KWITNLLDCFSGERNQLFGSSDF*ASLLSL
Trigger: GAGTGAAAGCAAAGAAGCCAAGAAGTCTGAAGAACC...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS-3UTR CAA 90 bp AAGTGGATTACAAATCTCCTCGACTGCTTTAGTGGGGAAAGGAATCAATTATTTCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATC +
Preference number: 5 (lower is better)
Translates to: KWITNLLDCFSGERNQLFRRLGI*LLVIFI
Trigger: GATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCG...AAATAATTGATTCCTTTCCCCACTAAAGCAGTCGAGGAGATTTGTAATCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp AAAGGGGCAGGCTTGGCTGAGGTGGGAAGCCCGACCTaGGCCCCACCGCGTCGCTGTCCGAAGGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: KGAGLAEVGSPT*APPRRCPKEAG
Trigger: CCCAGCCTCCTTCGGACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCACCTCAGCCAAGCCTGCCCCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
ENST00000569426.1
CDS CCA 72 bp CAGGAGACAGGAAGCGGCCCAGCCGGTCCCGCTTCATaGCAGCGGAGGACGCCAGCAGAATCCCGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: QETGSGPAGPAS*QRRTPAESRGC
Trigger: GCACCCGCGGGATTCTGCTGGCGTCCTCCGCTGCCATGAAGCGGGACCGGCTGGGCCGCTTCCTGTCTCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443381.7
ENST00000568295.5
CDS GCA 72 bp CAGGCGCTGGAAGTCCCGTACGAGCACGCGCTCCTCTaGGGATGGCCTCTCCATGCTCGCTCCAGGCGCCCT +
Preference number: 6 (lower is better)
Translates to: QALEVPYEHALL*GWPLHARSRRP
Trigger: AGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTCGTACGGGACTTCCAGCGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS GCA 72 bp CTGGCCGCATGTCCATGCACCCACCCCACCAAGCCGTaGAGGCACTGGGGGCCAGACACGCTCCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LAACPCTHPTKP*RHWGPDTLPPL
Trigger: CAGAGGAGGGAGCGTGTCTGGCCCCCAGTGCCTGCACGGCTTGGTGGGGTGGGTGCATGGACATGCGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS CCA 72 bp GACCTGGGCCCCACCGCGTCGCTGTCCGAAGGAGGCTaGGCCACATCCGTGCTGGGCAGGGTCTTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: DLGPTASLSEGG*ATSVLGRVLVS
Trigger: TGAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAGCGACGCGGTGGGGCCCAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS GCA 72 bp GTACGAGCACGCGCTCCTCTGCGGATGGCCTCTCCATaGTCGCTCCAGGCGCCCTCTCGGAGATGCTGCGCA +
Preference number: 6 (lower is better)
Translates to: VRARAPLRMASP*SLQAPSRRCCA
Trigger: TGCGCAGCATCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTCGTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp GTGGGGTCCTGGCGGACAGCCACACCAAGCAGGCGCTaGAAGTCCCGTACGAGCACGCGCTCCTCTGCGGAT +
Preference number: 6 (lower is better)
Translates to: VGSWRTATPSRR*KSRTSTRSSAD
Trigger: ATCCGCAGAGGAGCGCGTGCTCGTACGGGACTTCCAGCGCCTGCTTGGTGTGGCTGTCCGCCAGGACCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp CGTCGCTGTCCGAAGGAGGCTGGGCCACATCCGTGCTaGGCAGGGTCTTGGTCTCAGCCCCAACTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: RRCPKEAGPHPC*AGSWSQPQLGS
Trigger: GGACCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAGCGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CAA 90 bp TCGCTGTCCGAAGGAGGCTGGGCCACATCCGTGCTGGGCAGGGTCTaGGTCTCAGCCCCAACTGGGGTCCCTGTCCCTCTACCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: SLSEGGWATSVLGRV*VSAPTGVPVPLPWE
Trigger: CTCCCAGGGTAGAGGGACAGGGACCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGCCTCCTTCGGACAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp GGACTCACCCAGACACGCTCCCTCCTCTGCCCCTGTTaGGGGCTGGGCACCGACCTTTGCACAAGGCTTCCG +
Preference number: 6 (lower is better)
Translates to: GLTQTRSLLCPC*GLGTDLCTRLP
Trigger: CGGAAGCCTTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGTGTCTGGGTGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563983.5
CDS TCA 72 bp CTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGGCCTGCTCCGTGGGAG +
Preference number: 6 (lower is better)
Translates to: LLEENFPWQRRQ*PMARARPAPWE
Trigger: CTCCCACGGAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289816.9
ENST00000563983.5
ENST00000568064.5
CDS TCA 72 bp ACCCCACCAAGCCGTGCAGGCACTGGGGGCTGGATGTaGTCAGATCCACCAGACACGCTCCCTCCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: TPPSRAGTGGWM*SDPPDTLPPLP
Trigger: GGGCAGAGGAGGGAGCGTGTCTGGTGGATCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTTGGTGGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000568295.5
CDS TCA 72 bp CTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGGCCTGCTCCTGCCTCG +
Preference number: 6 (lower is better)
Translates to: LLEENFPWQRRQ*PMARARPAPAS
Trigger: CGAGGCAGGAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443381.7
ENST00000568295.5
CDS GCA 72 bp GCCTCTCCATGCTCGCTCCAGGCGCCCTCTCGGAGATaGTGCGCAGGCTTCTCGAGGAAAACTTCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: ASPCSLQAPSRR*CAGFSRKTSRG
Trigger: GCCACGGGAAGTTTTCCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp GGGCGTGGCAGCTCTTGCAGACAAACGGAGACAAGGTaGGGTCCTGGCGGACAGCCACACCAAGCAGGCGCT +
Preference number: 6 (lower is better)
Translates to: GRGSSCRQTETR*GPGGQPHQAGA
Trigger: AGCGCCTGCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp CAGATCCACCAGACACGCTCCCTCCTCTGCCCCTGTTaGGGGCTGGGCACCGACCTTTGCACAAGGCTTCCG +
Preference number: 6 (lower is better)
Translates to: QIHQTRSLLCPC*GLGTDLCTRLP
Trigger: CGGAAGCCTTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGTGTCTGGTGGATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000568295.5
CDS CCA 72 bp ATCCGTGCTGGGCAGGGTCTTGGTCTCAGCCCCAACTaGGGTCCCTGTCCCTCTACCCTGGGAGGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: IRAGQGLGLSPN*GPCPSTLGGLR
Trigger: CCTCAGACCTCCCAGGGTAGAGGGACAGGGACCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCACGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp AAGGAGGCTGGGCCACATCCGTGCTGGGCAGGGTCTTaGTCTCAGCCCCAACTGGGGTCCCTGTCCCTCTAC +
Preference number: 6 (lower is better)
Translates to: KEAGPHPCWAGS*SQPQLGSLSLY
Trigger: GTAGAGGGACAGGGACCCCAGTTGGGGCTGAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGCCTCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp ACCAGACACGCTCCCTCCTCTGCCCCTGTTGGGGGCTaGGCACCGACCCTGCAAAGGATCAGTGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: TRHAPSSAPVGG*APTLQRISVAM
Trigger: CATGGCCACACTGATCCTTTGCAGGGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGTGTCTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561536.5
CDS TCA 72 bp GCAGCCGTGGCGCCGTCTCTTTGTCCCATGGCCACTTaGCTGCCAGCGCACTGTCCAGCAAGAAGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: AAVAPSLCPMAT*LPAHCPARRPC
Trigger: GCAAGGCCTTCTTGCTGGACAGTGCGCTGGCAGTCAAGTGGCCATGGGACAAAGAGACGGCGCCACGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS TCA 72 bp GCTGGGCACCGACCCTGCAAAGGATCAGTGTGGCCATaGGCAGGACAAGCAGGCGGAGGTTCACAGCGCTCG +
Preference number: 6 (lower is better)
Translates to: AGHRPCKGSVWP*AGQAGGGSQRS
Trigger: CGAGCGCTGTGAACCTCCGCCTGCTTGTCCTGCTCATGGCCACACTGATCCTTTGCAGGGTCGGTGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561536.5
CDS GCA 72 bp GCGGACCTTGGCTTTCCACTCCGCTCGCTGAGCCGGTaGATCACAGCCTGGGCTCCACCTGTAGAGGAGATG +
Preference number: 6 (lower is better)
Translates to: ADLGFPLRSLSR*ITAWAPPVEEM
Trigger: CATCTCCTCTACAGGTGGAGCCCAGGCTGTGATGCACCGGCTCAGCGAGCGGAGTGGAAAGCCAAGGTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS CCA 72 bp GGCCTGCTCCTTGGACAGCTCAGATCCTGCGGACCTTaGCTTTCCACTCCGCTCGCTGAGCCGGTGCATCAC +
Preference number: 6 (lower is better)
Translates to: GLLLGQLRSCGP*LSTPLAEPVHH
Trigger: GTGATGCACCGGCTCAGCGAGCGGAGTGGAAAGCCAAGGTCCGCAGGATCTGAGCTGTCCAAGGAGCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS CCA 72 bp ACTGCAGAGAGTCAACAGAGATGTCAGATCCACGGCTaGTCGGCACCCAGCCCACCCTCCACCGGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: TAESQQRCQIHG*SAPSPPSTGGG
Trigger: TCCTCCCCCGGTGGAGGGTGGGCTGGGTGCCGACCAGCCGTGGATCTGACATCTCTGTTGACTCTCTGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563983.5
CDS TCA 72 bp CTTCTCGAGGAAAACTTCCCGTGGCAGAGGCGACAGTaGCCCATGGCGAGAGCCCGGCCTGCTCCTTGGACA +
Preference number: 6 (lower is better)
Translates to: LLEENFPWQRRQ*PMARARPAPWT
Trigger: TGTCCAAGGAGCAGGCCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS GCA 72 bp TCTCCATGCTCGCTCCAGGCGCCCTCTCGGAGATGCTaGGCAGGCTTCTCGAGGAAAACTTCCCGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: SPCSLQAPSRRC*AGFSRKTSRGR
Trigger: TCTGCCACGGGAAGTTTTCCTCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS GCA 72 bp GGCTGTGGCACTGGTAGAACTGGGCGTGGCAGCTCTTaGAGACAAACGGAGACAAGGTGGGGTCCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: GCGTGRTGRGSS*RQTETRWGPGG
Trigger: TCCGCCAGGACCCCACCTTGTCTCCGTTTGTCTGCAAGAGCTGCCACGCCCAGTTCTACCAGTGCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp CAGCTCTTGCAGACAAACGGAGACAAGGTGGGGTCCTaGCGGACAGCCACACCAAGCAGGCGCTGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: QLLQTNGDKVGS*RTATPSRRWKS
Trigger: GGACTTCCAGCGCCTGCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTGTCTGCAAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp CCAGCAAGAAGGCCTTGCAGCTGGAGCTGGTATCCATaGTGTAGTCGTGGCCCTGGTCGCAGCCCCACACGA +
Preference number: 6 (lower is better)
Translates to: PARRPCSWSWYP*CSRGPGRSPTR
Trigger: TCGTGTGGGGCTGCGACCAGGGCCACGACTACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CCA 72 bp GCGCACTGTCCAGCAAGAAGGCCTTGCAGCTGGAGCTaGTATCCATGGTGTAGTCGTGGCCCTGGTCGCAGC +
Preference number: 6 (lower is better)
Translates to: AHCPARRPCSWS*YPWCSRGPGRS
Trigger: GCTGCGACCAGGGCCACGACTACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGGACAGTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS CAA 72 bp TTTGCACAAGGCTTCCGGCGACCAGCCGGGGAGGCGTaGACCCTCTGCAGGAAGGACTTGAGAAGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: FAQGFRRPAGEA*TLCRKDLRRLW
Trigger: CCACAGCCTTCTCAAGTCCTTCCTGCAGAGGGTCAACGCCTCCCCGGCTGGTCGCCGGAAGCCTTGTGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000562530.5
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
CDS TCA 72 bp CAGGAGGGTCCGCCAGGCCACCTTCCAAAATCCGAGTaGCGGGCAGGTCCGTGCGTTCGTGCATTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: QEGPPGHLPKSE*RAGPCVRAFFW
Trigger: CCAGAAAAATGCACGAACGCACGGACCTGCCCGTCACTCGGATTTTGGAAGGTGGCCTGGCGGACCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562530.5
CDS GCA 72 bp CCACAGCCCTGGGAGGGGGTCCTGACTCACACTTACTaGAAAGGCTTGGCTCCCGAATGTCGCATTTGGTGG +
Preference number: 6 (lower is better)
Translates to: PQPWEGVLTHTY*KGLAPECRIWW
Trigger: CCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTAAGTGTGAGTCAGGACCCCCTCCCAGGGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS TCA 72 bp ACCCCACCAAGCCGTGCAGGCACTGGGGGCTGGATGTaGTCAGATCCACTGCAGAGAGTCAACAGAGATGTC +
Preference number: 6 (lower is better)
Translates to: TPPSRAGTGGWM*SDPLQRVNRDV
Trigger: GACATCTCTGTTGACTCTCTGCAGTGGATCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTTGGTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563983.5
CDS GCA 72 bp AGACGTCTCCGATCATCCGAGGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCTGGGGCCCTGCAAAGG +
Preference number: 6 (lower is better)
Translates to: RRLRSSEVEDGS*FSPNCPGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGAGACGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568064.5
ENST00000568295.5
CDS GCA 72 bp TCTTTTACCCGATCATCCGAGGTTGAAGATGGAAGCTaGTTCTCACCCAACTGCCCTGGGGCCCTGCAAAGG +
Preference number: 6 (lower is better)
Translates to: SFTRSSEVEDGS*FSPNCPGALQR
Trigger: CCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGGTAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000563983.5
ENST00000569426.1
CDS CAA 72 bp CACTTACTGCAAAGGCTTGGCTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: HLLQRLGSRMSH*VDEKVLPLLEG
Trigger: ACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS CAA 90 bp CCTGACTCACACTTACTGCAAAGGCTTGGCTCCCGAATGTCGCATTaGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACA +
Preference number: 6 (lower is better)
Translates to: PDSHLLQRLGSRMSH*VDEKVLPLLEGLST
Trigger: TGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTAAGTGTGAGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS CCA 72 bp ACTTACTGCAAAGGCTTGGCTCCCGAATGTCGCATTTaGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTT +
Preference number: 6 (lower is better)
Translates to: TYCKGLAPECRI*WTRRCFRCLKV
Trigger: AACCTTCAAGCAGCGGAAGCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568064.5
CDS TCA 72 bp AACCCACAGCAGACACCACGCTCAACTGTGAAGGACTaGAAGCTCTTCCTCCAAGGTCAGGAACAAGATACG +
Preference number: 6 (lower is better)
Translates to: NPQQTPRSTVKD*KLFLQGQEQDT
Trigger: CGTATCTTGTTCCTGACCTTGGAGGAAGAGCTTTCAGTCCTTCACAGTTGAGCGTGGTGTCTGCTGTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS TCA 72 bp CTACATGAAACCCACAGCAGACACCACGCTCAACTGTaGAGGACTGAAAGCTCTTCCTCCAAGGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: LHETHSRHHAQL*RTESSSSKVRN
Trigger: GTTCCTGACCTTGGAGGAAGAGCTTTCAGTCCTTCACAGTTGAGCGTGGTGTCTGCTGTGGGTTTCATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS CAA 72 bp TTCATCTTCACTCAAGACGTCTCCGATCATCCGAGGTaGAAGATGGAAGCTGCTTCTCACCCAACTGCCCTG +
Preference number: 6 (lower is better)
Translates to: FIFTQDVSDHPR*KMEAASHPTAL
Trigger: CAGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAACCTCGGATGATCGGAGACGTCTTGAGTGAAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568064.5
ENST00000568295.5
CDS TCA 72 bp CATCTTCACTCAAGACGTCTCCCTCAGAAAGGTCACTaGACTCGTCTTTTACCCGATCATCCGAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: HLHSRRLPQKGH*TRLLPDHPRLK
Trigger: CTTCAACCTCGGATGATCGGGTAAAAGACGAGTTCAGTGACCTTTCTGAGGGAGACGTCTTGAGTGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000563983.5
ENST00000569426.1
CDS CAA 90 bp CCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATCTTCACTCAAGACGTCTCCCTCAGA +
Preference number: 6 (lower is better)
Translates to: PFWVRLKGLVRRLGI*LLVIFIFTQDVSLR
Trigger: TCTGAGGGAGACGTCTTGAGTGAAGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000563983.5
ENST00000569426.1
CDS CAA 90 bp CCTTTCTGGGTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATCTTCACTCAAGACGTCTCCGATCAT +
Preference number: 6 (lower is better)
Translates to: PFWVRLKGLVRRLGI*LLVIFIFTQDVSDH
Trigger: ATGATCGGAGACGTCTTGAGTGAAGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562530.5
ENST00000563541.1
ENST00000568064.5
ENST00000568295.5
CDS TCA 72 bp AGAAAGGAACTTCTTCACCACGATAAAACCTCTACATaGAACCCACAGCAGACACCACGCTCAACTGTGAAG +
Preference number: 6 (lower is better)
Translates to: RKELLHHDKTST*NPQQTPRSTVK
Trigger: CTTCACAGTTGAGCGTGGTGTCTGCTGTGGGTTTCATGTAGAGGTTTTATCGTGGTGAAGAAGTTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564004.5
CDS CAA 72 bp GTAAGGCTCAAAGGACTCGTCCGAAGACTGGGCATTTaGCTTCTTGTCATTTTCATCTTCACTCAAGACGTC +
Preference number: 6 (lower is better)
Translates to: VRLKGLVRRLGI*LLVIFIFTQDV
Trigger: GACGTCTTGAGTGAAGATGAAAATGACAAGAAGCAAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000289816.9
ENST00000443381.7
ENST00000561536.5
ENST00000562530.5
ENST00000563541.1
ENST00000563983.5
ENST00000568064.5
ENST00000568295.5
ENST00000569426.1