RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF275 (Homo sapiens)

Ensembl gene IDs: ENSG00000063587

Ensembl transcript IDs: ENST00000370249.3, ENST00000370251.3, ENST00000438239.1, ENST00000647705.1, ENST00000650114.2

Found 884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGGTTaGCTGATGCTTCTGCAGTGCCGAGCGCCTCTTGAACACGCGGCC +
Preference number: 1 (lower is better)
Translates to: VPVPRDHRAFLLVVG*LMLLQCRAPLEHAA
Trigger: GGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAGCCAACCCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR CCA 90 bp CCTGTCCCCAGCCACAGCTGCTGGGAAGTCACAGCACAGCCCTGGTaGGGCTGGCTTCTATCTGTGGCTTCTGTGGGCCACTGGAGGGGC +
Preference number: 1 (lower is better)
Translates to: PVPSHSCWEVTAQPW*GWLLSVASVGHWRG
Trigger: GCCCCTCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCTGGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp CTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGGTTGGCTaGTGCTTCTGCAGTGCCGAGCGCCTCTTGAACACGCGGCCACAC +
Preference number: 1 (lower is better)
Translates to: LSRGTTGRFYSWWVG*CFCSAERLLNTRPH
Trigger: GTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAGCCAACCCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR CCA 90 bp CCCAGCCACAGCTGCTGGGAAGTCACAGCACAGCCCTGGTGGGGCTaGCTTCTATCTGTGGCTTCTGTGGGCCACTGGAGGGGCAGGTTC +
Preference number: 1 (lower is better)
Translates to: PSHSCWEVTAQPWWG*LLSVASVGHWRGRF
Trigger: GAACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp CAGCCCTGGTGGGGCTGGCTTCTATCTGTGGCTTCTGTGGGCCACTaGAGGGGCAGGTTCCTCGCTAGCCCTTGCTGCTGTTCCTCTTGG +
Preference number: 1 (lower is better)
Translates to: QPWWGWLLSVASVGH*RGRFLASPCCCSSW
Trigger: CCAAGAGGAACAGCAGCAAGGGCTAGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp GCTGGGAAGTCACAGCACAGCCCTGGTGGGGCTGGCTTCTATCTGTaGCTTCTGTGGGCCACTGGAGGGGCAGGTTCCTCGCTAGCCCTT +
Preference number: 1 (lower is better)
Translates to: AGKSQHSPGGAGFYL*LLWATGGAGSSLAL
Trigger: AAGGGCTAGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGTGACTTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp GCTTCTGTGGGCCACTGGAGGGGCAGGTTCCTCGCTAGCCCTTGCTaGTGTTCCTCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACC +
Preference number: 1 (lower is better)
Translates to: ASVGHWRGRFLASPC*CSSWGSPLEMVAQT
Trigger: GGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGAGGAACAGCAGCAAGGGCTAGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp CACTGGAGGGGCAGGTTCCTCGCTAGCCCTTGCTGCTGTTCCTCTTaGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAG +
Preference number: 1 (lower is better)
Translates to: HWRGRFLASPCCCSS*GSPLEMVAQTQEDQ
Trigger: CTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGAGGAACAGCAGCAAGGGCTAGCGAGGAACCTGCCCCTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp CACAGGGCGTTTCTACTCGTGGTGGGTTGGCTGATGCTTCTGCAGTaGCGAGCGCCTCTTGAACACGCGGCCACACTGGCTGCATTCGCA +
Preference number: 1 (lower is better)
Translates to: HRAFLLVVGWLMLLQ*RAPLEHAATLAAFA
Trigger: TGCGAATGCAGCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAGCCAACCCACCACGAGTAGAAACGCCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR GCA 90 bp TGGGTGCCTGAGAAGCCCTTCCAAGTTGTGTCTGCTAGGAAGCTCTaGCTCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCC +
Preference number: 1 (lower is better)
Translates to: WVPEKPFQVVSARKL*LSLGGPTRRAHFLA
Trigger: GGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCTCAGGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp GGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTaGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAA +
Preference number: 1 (lower is better)
Translates to: GSISSVPQWSGWIVK*CPQIDRESASRMRK
Trigger: TTTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp AGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTaGCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAAGAG +
Preference number: 1 (lower is better)
Translates to: SISSVPQWSGWIVKW*PQIDRESASRMRKE
Trigger: CTCTTTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp CGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTaGTGCCAGAACACATGGGTGAATTTTCCCCTAGCTGCCCACAGC +
Preference number: 1 (lower is better)
Translates to: RASALLPSLRCGYRK*CQNTWVNFPLAAHS
Trigger: GCTGTGGGCAGCTAGGGGAAAATTCACCCATGTGTTCTGGCATCACTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp TATGTAACAAGTGCTTTTGGCTCCTCTCCAGCCTGGGGGTCAGGATaGGTGCCTGAGAAGCCCTTCCAAGTTGTGTCTGCTAGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: YVTSAFGSSPAWGSG*VPEKPFQVVSARKL
Trigger: GAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCCAAAAGCACTTGTTACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp GAAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATaGTCTGATGATTGCTTGCTGCCCTTGGGTCAGGTGTTCAGTTCT +
Preference number: 1 (lower is better)
Translates to: EGLVVSVVHHVLSAL*SDDCLLPLGQVFSS
Trigger: AGAACTGAACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp CTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTaGATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCT +
Preference number: 1 (lower is better)
Translates to: LIYDGSISSVPQWSG*IVKWCPQIDRESAS
Trigger: AGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp GAGTTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTaGTCAGGTTGGATAGTCAAGTGGTGCCCACAGATAGACAGGGAG +
Preference number: 1 (lower is better)
Translates to: EFWLIYDGSISSVPQ*SGWIVKWCPQIDRE
Trigger: CTCCCTGTCTATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp AATCATGAGGGCAACGTTCTCTTCAGGAAAGCTGGGATCACATTATaGGGACGCCATCGTGGAACAGCTCTGTGTGTTTCTCTGGGGCGG +
Preference number: 1 (lower is better)
Translates to: NHEGNVLFRKAGITL*GRHRGTALCVSLGR
Trigger: CCGCCCCAGAGAAACACACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAGAGAACGTTGCCCTCATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp TGTGTCCAAGGAGATGTTTCTTGGGTGAATCTGCTGCTCAGTCACTaGATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTCAAAGGA +
Preference number: 1 (lower is better)
Translates to: CVQGDVSWVNLLLSH*IHSEHCQGSQELKG
Trigger: TCCTTTGAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp TCTGCAGCCACGATGGCAGTCCTCGTGATAACCTTCGGAGGTAGGTaGTGTGATCACCCCTGTTTTATAGAACAAGAAACGGAAGGCTGG +
Preference number: 1 (lower is better)
Translates to: SAATMAVLVITFGGR*CDHPCFIEQETEGW
Trigger: CCAGCCTTCCGTTTCTTGTTCTATAAAACAGGGGTGATCACAGCACCTACCTCCGAAGGTTATCACGAGGACTGCCATCGTGGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp TGCTCCCCACACCTTCTGATGCCTAGAAGCTTCTGTTTCCTTGTTTaGATTTCAGATCTGGAAGGCCTGGTGGTGTCCGTGGTCCATCAT +
Preference number: 1 (lower is better)
Translates to: CSPHLLMPRSFCFLV*ISDLEGLVVSVVHH
Trigger: ATGATGGACCACGGACACCACCAGGCCTTCCAGATCTGAAATGCAAACAAGGAAACAGAAGCTTCTAGGCATCAGAAGGTGTGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp AGGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTaGCAAAACACAATAGAAAAGAGTAGAGACCCACTCAAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: RCSCSQVRLGQEAAK*QNTIEKSRDPLKLA
Trigger: AGCCAGCTTGAGTGGGTCTCTACTCTTTTCTATTGTGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp AAGGCATCGACTTTCACCCATCTTAGAGAACAGAGAACACACGTTTaGACAGGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: KASTFTHLREQRTHV*TGVHAVRCDLARKQ
Trigger: CTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCTCTAAGATGGGTGAAAGTCGATGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp ATACCAGGAGAGGCTCATTTCCAAAAGGAGGCGTCACCCTGCACTTaGGTCCTTGAGATGTATCTCTTCTTAGGGGCATGCTCTCAACTA +
Preference number: 1 (lower is better)
Translates to: IPGEAHFQKEASPCT*VLEMYLFLGACSQL
Trigger: TAGTTGAGAGCATGCCCCTAAGAAGAGATACATCTCAAGGACTCAAGTGCAGGGTGACGCCTCCTTTTGGAAATGAGCCTCTCCTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp AACACATGGGTGAATTTTCCCCTAGCTGCCCACAGCAGAAGCCTATaGACCAATCTCTTTCTAGTTCTAGAGTCACCGGCTGAAAGGAGG +
Preference number: 1 (lower is better)
Translates to: NTWVNFPLAAHSRSL*TNLFLVLESPAERR
Trigger: CCTCCTTTCAGCCGGTGACTCTAGAACTAGAAAGAGATTGGTTCATAGGCTTCTGCTGTGGGCAGCTAGGGGAAAATTCACCCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp AGAGAGCCCAAGGAAATCCACCCCCAAGTTACCAGAGGCAAGAAATaGTCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGC +
Preference number: 1 (lower is better)
Translates to: REPKEIHPQVTRGKK*SWRNYRTHVKATDC
Trigger: GCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATTTCTTGCCTCTGGTAACTTGGGGGTGGATTTCCTTGGGCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp CACAGACAAGGATATGTGACAGGAAGCTGGGTGACATTTTGCATCTaGCATAGCAGTACACCTAGAGAGCCCAAGGAAATCCACCCCCAA +
Preference number: 1 (lower is better)
Translates to: HRQGYVTGSWVTFCI*HSSTPREPKEIHPQ
Trigger: TTGGGGGTGGATTTCCTTGGGCTCTCTAGGTGTACTGCTATGTCAGATGCAAAATGTCACCCAGCTTCCTGTCACATATCCTTGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp CCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGATTGCTTaGTGCCCTTGGGTCAGGTGTTCAGTTCTGGCTGAATTAATATGG +
Preference number: 1 (lower is better)
Translates to: PWSIMFCQLYALMIA*CPWVRCSVLAELIW
Trigger: CCATATTAATTCAGCCAGAACTGAACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCATAGAGCTGACAGAACATGATGGACCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp AAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTaGGTAGGGACTATTCTGGAAATGCAAGAGTGGGGTGACACAGCT +
Preference number: 1 (lower is better)
Translates to: KHMECNTTQKHARCN*VGTILEMQEWGDTA
Trigger: AGCTGTGTCACCCCACTCTTGCATTTCCAGAATAGTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp GTTTCCTTGTTTGCATTTCAGATCTGGAAGGCCTGGTGGTGTCCGTaGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGATTGCTTGC +
Preference number: 1 (lower is better)
Translates to: VSLFAFQIWKAWWCP*SIMFCQLYALMIAC
Trigger: GCAAGCAATCATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTTCCAGATCTGAAATGCAAACAAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp GAAGCTTCTGTTTCCTTGTTTGCATTTCAGATCTGGAAGGCCTGGTaGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATG +
Preference number: 1 (lower is better)
Translates to: EASVSLFAFQIWKAW*CPWSIMFCQLYALM
Trigger: CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTTCCAGATCTGAAATGCAAACAAGGAAACAGAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp CTAGAAGCTTCTGTTTCCTTGTTTGCATTTCAGATCTGGAAGGCCTaGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTG +
Preference number: 1 (lower is better)
Translates to: LEASVSLFAFQIWKA*WCPWSIMFCQLYAL
Trigger: CAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTTCCAGATCTGAAATGCAAACAAGGAAACAGAAGCTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp TGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGATTGCTTGCTaGCCTTGGGTCAGGTGTTCAGTTCTGGCTGAATTAATATGGCCT +
Preference number: 1 (lower is better)
Translates to: WSIMFCQLYALMIAC*PWVRCSVLAELIWP
Trigger: AGGCCATATTAATTCAGCCAGAACTGAACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCATAGAGCTGACAGAACATGATGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp ACCAATCTCTTTCTAGTTCTAGAGTCACCGGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTGTGTCCAAGGAGATGTTTCTTGGGT +
Preference number: 1 (lower is better)
Translates to: TNLFLVLESPAERRM*SRQVFLCPRRCFLG
Trigger: ACCCAAGAAACATCTCCTTGGACACAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGCCGGTGACTCTAGAACTAGAAAGAGATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp ATCATGTTCTGTCAGCTCTATGCTCTGATGATTGCTTGCTGCCCTTaGGTCAGGTGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGC +
Preference number: 1 (lower is better)
Translates to: IMFCQLYALMIACCP*VRCSVLAELIWPRS
Trigger: GCTTCTAGGCCATATTAATTCAGCCAGAACTGAACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCATAGAGCTGACAGAACATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp CTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATaGCCGCTGCAATTGGGTAGGGACTATTCTGGAAATGCAAGAGTG +
Preference number: 1 (lower is better)
Translates to: LGQNQAHGMQHHSKT*PLQLGRDYSGNARV
Trigger: CACTCTTGCATTTCCAGAATAGTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp AGGAACATCTCATGCACGTGCGTGGAAACCCAATTGTCATGTGTATaGACTACAAAAGGATCGGGAAAAGAACACATTTCCTCACAACAG +
Preference number: 1 (lower is better)
Translates to: RNISCTCVETQLSCV*TTKGSGKEHISSQQ
Trigger: CTGTTGTGAGGAAATGTGTTCTTTTCCCGATCCTTTTGTAGTTCATACACATGACAATTGGGTTTCCACGCACGTGCATGAGATGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp GACATAGTAACAAGGTTTGAAGGAGGAACATCTCATGCACGTGCGTaGAAACCCAATTGTCATGTGTATGAACTACAAAAGGATCGGGAA +
Preference number: 1 (lower is better)
Translates to: DIVTRFEGGTSHARA*KPNCHVYELQKDRE
Trigger: TTCCCGATCCTTTTGTAGTTCATACACATGACAATTGGGTTTCCACGCACGTGCATGAGATGTTCCTCCTTCAAACCTTGTTACTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp TTCAAAAATAAGAGAACAGGGTGCACTGTGATTTCACTCATTTTATaGCCCGCATGTGGTGGGTTCAGTAAAGGAACAATATACGTAGAC +
Preference number: 1 (lower is better)
Translates to: FKNKRTGCTVISLIL*PACGGFSKGTIYVD
Trigger: GTCTACGTATATTGTTCCTTTACTGAACCCACCACATGCGGGCCATAAAATGAGTGAAATCACAGTGCACCCTGTTCTCTTATTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 90 bp ATTTCCTCACAACAGGAATACATGAGATTAGAAAGAAAACCGGAATaGGGTAGATGCATGAATGCACAGACAAGGATATGTGACAGGAAG +
Preference number: 1 (lower is better)
Translates to: ISSQQEYMRLERKPE*GRCMNAQTRICDRK
Trigger: CTTCCTGTCACATATCCTTGTCTGTGCATTCATGCATCTACCTCATTCCGGTTTTCTTTCTAATCTCATGTATTCCTGTTGTGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 90 bp ATGGTACAAGCTACTCTTGATGGGCATAACGTAACACTTATAAATTaGTGGTGGCAGTATAAATCGGTCTCAACCTTTTGGAAGACAAAA +
Preference number: 1 (lower is better)
Translates to: MVQATLDGHNVTLIN*WWQYKSVSTFWKTK
Trigger: TTTTGTCTTCCAAAAGGTTGAGACCGATTTATACTGCCACCAGCAATTTATAAGTGTTACGTTATGCCCATCAAGAGTAGCTTGTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp GTACAAGCTACTCTTGATGGGCATAACGTAACACTTATAAATTGCTaGTGGCAGTATAAATCGGTCTCAACCTTTTGGAAGACAAAATAT +
Preference number: 1 (lower is better)
Translates to: VQATLDGHNVTLINC*WQYKSVSTFWKTKY
Trigger: ATATTTTGTCTTCCAAAAGGTTGAGACCGATTTATACTGCCACCAGCAATTTATAAGTGTTACGTTATGCCCATCAAGAGTAGCTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 90 bp CAAGCTACTCTTGATGGGCATAACGTAACACTTATAAATTGCTGGTaGCAGTATAAATCGGTCTCAACCTTTTGGAAGACAAAATATATA +
Preference number: 1 (lower is better)
Translates to: QATLDGHNVTLINCW*QYKSVSTFWKTKYI
Trigger: TATATATTTTGTCTTCCAAAAGGTTGAGACCGATTTATACTGCCACCAGCAATTTATAAGTGTTACGTTATGCCCATCAAGAGTAGCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGCCGGTGGCGACTaGGGCCGGAGCTCCGGCGGA +
Preference number: 2 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLSAGGD*GRSSGG
Trigger: TCCGCCGGAGCTCCGGCCTCAGTCGCCACCGGCGGA...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR CCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTAACACGCGGCCACACTaGCTGCATTCGCAGCGCCGC +
Preference number: 2 (lower is better)
Translates to: SALVGPREGHTSLPGPPSNTRPH*LHSQRR
Trigger: GCGGCGCTGCGAATGCAGCCAGTGTGGCCGCGTGTT...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR CCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCCGCCGCGCCCCACTGTaGATCCGCCGGTGGCGACTG +
Preference number: 2 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPRRAPL*IRRWRL
Trigger: CAGTCGCCACCGGCGGATCCACAGTGGGGCGCGGCG...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR CAA 90 bp CTCCAGCCTGGGGGTCAGGATGGGTGCCTGAGAAGCCCTTCCAAGTaGTGTCTGCTAGGAAGCTCTGCCTCAGCCTTGGTGGGCCCACGA +
Preference number: 2 (lower is better)
Translates to: LQPGGQDGCLRSPSK*CLLGSSASALVGPR
Trigger: TCGTGGGCCCACCAAGGCTGAGGCAGAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGACCCCCAGGCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTGTGCCGAGCGCCTCTTaGACACGCGGCCACACTGGC +
Preference number: 2 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTVPSAS*TRGHTG
Trigger: GCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCAC...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR CCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGACTCTGCCATCCCCTCTaGGGACTCCGTCCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGLCHPL*GLRPCP
Trigger: GGGACAGGGACGGAGTCCCCAGAGGGGATGGCAGAG...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTAGTCCGCATCTCGGATaGGGAAAGAGCCTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: SALVGPREGHTSLPGPPSSPHLG*GKSLLL
Trigger: GAGAAGCAGGCTCTTTCCTCATCCGAGATGCGGACT...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGCTCTGCCATCCCCTCTaGGGACTCCGTCCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMLCHPL*GLRPCP
Trigger: GGGACAGGGACGGAGTCCCCAGAGGGGATGGCAGAG...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCAGCTCAAAGGATGGCTaGGCTGCTTGCTCCCAGACC +
Preference number: 2 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLSSKDG*AACSQT
Trigger: GGTCTGGGAGCAAGCAGCCCAGCCATCCTTTGAGCT...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAATCCACTCGGAGCATTaGCAAGGCTCCCAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLIHSEH*QGSQEL
Trigger: GAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGAT...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTGCTCTGCCTCAGCCTTaGTGGGCCCACGAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGALPQP*WAHEKG
Trigger: GCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGC...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGACTGATGCTTCTGCAGTaGCGAGCGCCTCTTGAACAC +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGLMLLQ*RAPLEH
Trigger: GTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR GCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAGATGGCTGGGCTGCTTaGTCCCAGACCAAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGDGWAA*SQTKFG
Trigger: TCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATC...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTGATGGCTGGGCTGCTTaGTCCCAGACCAAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTDGWAA*SQTKFG
Trigger: TCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATC...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAATCCACTCGGAGCATTaGCAAGGCTCCCAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTIHSEH*QGSQEL
Trigger: GAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGAT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCAGACAATGACAGCAGATaGCCTTCACTGAGTGTGTAC +
Preference number: 2 (lower is better)
Translates to: TSHRRGRVPLRASALLPSDNDSR*PSLSVY
Trigger: GTACACACTCAGTGAAGGCCATCTGCTGTCATTGTC...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTGACAATGACAGCAGATaGCCTTCACTGAGTGTGTAC +
Preference number: 2 (lower is better)
Translates to: SALVGPREGHTSLPGPPSDNDSR*PSLSVY
Trigger: GTACACACTCAGTGAAGGCCATCTGCTGTCATTGTC...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTCACCTTCTGATGGGCTaGGGTTGCAGCTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SALVGPREGHTSLPGPPSHLLMG*GCSFLF
Trigger: AAACAAAAAGCTGCAACCCCAGCCCATCAGAAGGTG...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACAGGAGCTCAAAGGATaGCTGGGCTGCTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTQELKG*LGCLLP
Trigger: TGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGCTTCTGTGGGCCACTaGAGGGGCAGGTTCCTCGCT +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPASVGH*RGRFLA
Trigger: AGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCTGCCTCAGCCTTGGTaGGCCCACGAGAAGGGCACA +
Preference number: 2 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDLPQPW*AHEKGT
Trigger: TGTGCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 90 bp TTCTTGGGTGAATCTGCTGCTCAGTCACTGAATCCACTCGGAGCATaGCCAAGGCTCCCAGGAGCTCAAAGGATGGCTGGGCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: FLGESAAQSLNPLGA*PRLPGAQRMAGLLA
Trigger: AGCAAGCAGCCCAGCCATCCTTTGAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGATTCACCCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGCTGTGGATCCGCCGGTaGCGACTGAGGCCGGAGCTC +
Preference number: 2 (lower is better)
Translates to: CSVLAELIWPRSGVANHMLWIRR*RLRPEL
Trigger: GAGCTCCGGCCTCAGTCGCCACCGGCGGATCCACAG...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR CCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGCCGCAGTGGTCAGGTTaGATAGTCAAGTGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: VPLRASALLPSLRCGYRKPQWSG*IVKWCP
Trigger: TGGGCACCACTTGACTATCCAACCTGACCACTGCGG...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGCAGCCCTGGTGGGGCTaGCTTCTATCTGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMQPWWG*LLSVAS
Trigger: AGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTG...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGCGCATAAGAGAAAGATaGGACTGGTGGTCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: VPLRASALLPSLRCGYRKRIRER*DWWSGG
Trigger: GCCTCCTGACCACCAGTCTCATCTTTCTCTTATGCG...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACACAGCAGAAGCCTATaGACCAATCTCTTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: TSHRRGRVPLRASALLPSHSRSL*TNLFLV
Trigger: AACTAGAAAGAGATTGGTTCATAGGCTTCTGCTGTG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAACGCGGCCACACTGGCTaGATTCGCAGCGCCGCGCCC +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKRGHTG*IRSAAP
Trigger: GGGCGCGGCGCTGCGAATGCAGCCAGTGTGGCCGCG...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTGATGAGGAAAGAGCCTaGTTCTCTGGCCCATTTCCA +
Preference number: 2 (lower is better)
Translates to: SAAQSLNPLGALPRLPGADEERA*FSGPFP
Trigger: TGGAAATGGGCCAGAGAAGCAGGCTCTTTCCTCATC...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGGAGCATCTCCAGTGTaGCGCAGTGGTCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPGASPV*RSGQVG
Trigger: TCCAACCTGACCACTGCGGCACACTGGAGATGCTCC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAGAATTTTCCCCTAGCTaGCCACAGCAGAAGCCTATG +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGEFSPS*PQQKPM
Trigger: CATAGGCTTCTGCTGTGGGCAGCTAGGGGAAAATTC...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGACGGCAGGAAGGGATaGCAAGACACCACGTCCCAG +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGDGRKG*QDTTSQ
Trigger: CTGGGACGTGGTGTCTTGGCATCCCTTCCTGCCGTC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAATGAGGACGCCATCGTaGAACAGCTCTGTGTGTTTC +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGMRTPS*NSSVCF
Trigger: GAAACACACAGAGCTGTTCCACGATGGCGTCCTCAT...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTCCAGTGTGCCGCAGTaGTCAGGTTGGATAGTCAAG +
Preference number: 2 (lower is better)
Translates to: VPLRASALLPSLRCGYRKSSVPQ*SGWIVK
Trigger: CTTGACTATCCAACCTGACCACTGCGGCACACTGGA...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGCGCATAAGAGAAAGATaGGACTGGTGGTCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWRIRER*DWWSGG
Trigger: GCCTCCTGACCACCAGTCTCATCTTTCTCTTATGCG...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACTGCTGCTCAGTCACTaGATCCACTCGGAGCATTGC +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPLLLSH*IHSEHC
Trigger: GCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACATGGATAGTCAAGTGGTaGCCACAGATAGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTWIVKW*PQIDRE
Trigger: CTCCCTGTCTATCTGTGGGCACCACTTGACTATCCA...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTGGATAGTCAAGTGGTaGCCACAGATAGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: VPLRASALLPSLRCGYRKWIVKW*PQIDRE
Trigger: CTCCCTGTCTATCTGTGGGCACCACTTGACTATCCA...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGGAGCATCTCCAGTGTaGCGCAGTGGTCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGGASPV*RSGQVG
Trigger: TCCAACCTGACCACTGCGGCACACTGGAGATGCTCC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACATAGCCCAGGGCAGTaGTGCCAGCTTCTATCAGCA +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPHSPGQ*CQLLSA
Trigger: TGCTGATAGAAGCTGGCAGCACTGCCCTGGGCTATG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAGCTCAAAGGATaGCTGGGCTGCTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGQELKG*LGCLLP
Trigger: TGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTG...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLAERRM*SRQVFL
Trigger: CAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGC...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTGCTCCTCCTGGGCATaGCTGTTGCAAATCATAGCC +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMCSSWA*LLQIIA
Trigger: GGCTATGATTTGCAACAGCCATGCCCAGGAGGAGCA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCACTGTTCATCTCCTTTaGCTCTGCCATCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: ISNESLMKGSSLSDRAELTVHLL*LCHPLW
Trigger: CCAGAGGGGATGGCAGAGTCAAAGGAGATGAACAGT...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCCGTTTGGCCTCACAATaGCATTTTGGGTGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLRLASQ*HFGCFK
Trigger: TTTAAAGCACCCAAAATGTCATTGTGAGGCCAAACG...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAAACTACTGCAAGAACTaGGGCCCACAGGGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPNYCKN*GPQGKR
Trigger: CCTTTTGCCCTGTGGGCCTCAGTTCTTGCAGTAGTT...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTCACCGCAAACACCATaGACAGCTGTTCTGTCAACC +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMSPQTP*TAVLST
Trigger: GGTTGACAGAACAGCTGTTCATGGTGTTTGCGGTGA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGGACGGCAGGAAGGGATaGCAAGACACCACGTCCCAG +
Preference number: 2 (lower is better)
Translates to: CSVLAELIWPRSGVANHMDGRKG*QDTTSQ
Trigger: CTGGGACGTGGTGTCTTGGCATCCCTTCCTGCCGTC...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATGGTTTCAGTCCGCTGTaGATGCGCCGGTGCTTGATG +
Preference number: 2 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNGFSPL*MRRCLM
Trigger: CATCAAGCACCGGCGCATCCACAGCGGACTGAAACC...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTACTACTCGTGGTGGGTTaGCTGATGCTTCTGCAGTGC +
Preference number: 2 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLLLVVG*LMLLQC
Trigger: GCACTGCAGAAGCATCAGCCAACCCACCACGAGTAG...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCAGGCCGGTGGTCCTaGCACTCTGCAGCCACGATG +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCPGRWS*HSAATM
Trigger: CATCGTGGCTGCAGAGTGCCAGGACCACCGGCCTGG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCGACAATGACAGCAGATaGCCTTCACTGAGTGTGTAC +
Preference number: 2 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPDNDSR*PSLSVY
Trigger: GTACACACTCAGTGAAGGCCATCTGCTGTCATTGTC...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCTCCAGCCTGCCCACCTaGTGTACTCACCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGSSLPT*CTHLLM
Trigger: CATCAGAAGGTGAGTACACCAGGTGGGCAGGCTGGA...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGACAAGGAGATGTTTCTTaGGTGAATCTGCTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGQGDVS*VNLLLS
Trigger: ACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTG...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCTGCTGCTGTTCCTCTTaGGGGAGCCCACTGGAAATG +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGCCCSS*GSPLEM
Trigger: CATTTCCAGTGGGCTCCCCCAAGAGGAACAGCAGCA...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTCTGCCTCAGCCTTGGTaGGCCCACGAGAAGGGCACA +
Preference number: 2 (lower is better)
Translates to: INERARHGRVLLGKGARLLPQPW*AHEKGT
Trigger: TGTGCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAG...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGCTCTGCCTCAGCCTTaGTGGGCCCACGAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCALPQP*WAHEKG
Trigger: GCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGGCTCCTCTCCAGCCTaGGGGTCAGGATGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCGSSPA*GSGWVP
Trigger: AGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCACTGTTCATCTCCTTTaGCTCTGCCATCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGTVHLL*LCHPLW
Trigger: CCAGAGGGGATGGCAGAGTCAAAGGAGATGAACAGT...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACTGCACTTGAGTCCTTaGGATGTATCTCTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTLHLSP*DVSLLR
Trigger: CCTAAGAAGAGATACATCTCAAGGACTCAAGTGCAG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGGGTGTACTCACCTTCTaGTGGGCTGGGGTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGGVLTF*WAGVAA
Trigger: AGCTGCAACCCCAGCCCATCAGAAGGTGAGTACACC...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAACTCTGCCATCCCCTCTaGGGACTCCGTCCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKLCHPL*GLRPCP
Trigger: GGGACAGGGACGGAGTCCCCAGAGGGGATGGCAGAG...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGATGAGGACGCCATCGTaGAACAGCTCTGTGTGTTTC +
Preference number: 2 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPMRTPS*NSSVCF
Trigger: GAAACACACAGAGCTGTTCCACGATGGCGTCCTCAT...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGAGCTCAAAGGATGGCTaGGCTGCTTGCTCCCAGACC +
Preference number: 2 (lower is better)
Translates to: CSVLAELIWPRSGVANHMSSKDG*AACSQT
Trigger: GGTCTGGGAGCAAGCAGCCCAGCCATCCTTTGAGCT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGCAGGAGCTCAAAGGATaGCTGGGCTGCTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGQELKG*LGCLLP
Trigger: TGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTG...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTATCTGTGGCTTCTGTaGGCCACTGGAGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGYLWLL*ATGGAG
Trigger: ACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGCAGCCCTGGTGGGGCTaGCTTCTATCTGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: CSVLAELIWPRSGVANHMQPWWG*LLSVAS
Trigger: AGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTG...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGCAGCCCTGGTGGGGCTaGCTTCTATCTGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGQPWWG*LLSVAS
Trigger: AGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTG...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCCAGCCACAGCTGCTaGGAAGTCACAGCACAGCCC +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCPSHSC*EVTAQP
Trigger: GGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCTGGG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGGCTCCTCTCCAGCCTaGGGGTCAGGATGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKGSSPA*GSGWVP
Trigger: AGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCC...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 90 bp GAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATaGACAAGCCACAGAATGACGGCAATAACTATGACAATGACAATG +
Preference number: 2 (lower is better)
Translates to: ETGGQEAWGLSPVLE*TSHRMTAITMTMTM
Trigger: CATTGTCATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 90 bp CTAGAGTCACCGGCTGAAAGGAGGATGTGGTCTAGGCAAGTCTTCTaGTGTCCAAGGAGATGTTTCTTGGGTGAATCTGCTGCTCAGTCA +
Preference number: 2 (lower is better)
Translates to: LESPAERRMWSRQVF*CPRRCFLGESAAQS
Trigger: TGACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGGACACAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGCCGGTGACTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCTGGACTGAAATACCTTaGTGGTACTTCCTACCAGTT +
Preference number: 2 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPWTEIP*WYFLPV
Trigger: AACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCA...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTAGTAAAATGATTTCGTaGAAGGGAGGGTGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: SAAQSLNPLGALPRLPGASKMIS*KGGWQK
Trigger: TTTTTGCCACCCTCCCTTTCACGAAATCATTTTACT...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAGGAGTCAGAGTAAAATaGTTTCGTGAAAGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEGVRVK*FREREG
Trigger: ACCCTCCCTTTCACGAAATCATTTTACTCTGACTCC...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACCTGCTGCTCAGTCACTaGATCCACTCGGAGCATTGC +
Preference number: 2 (lower is better)
Translates to: YRTHVKATDCIEREHGFHLLLSH*IHSEHC
Trigger: GCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAG...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGCACAGCAGAAGCCTATaGACCAATCTCTTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: VPLRASALLPSLRCGYRKHSRSL*TNLFLV
Trigger: AACTAGAAAGAGATTGGTTCATAGGCTTCTGCTGTG...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCTGTGGCTATAGGAAGTaGTGCCAGAACACATGGGTG +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGCGYRK*CQNTWV
Trigger: CACCCATGTGTTCTGGCATCACTTCCTATAGCCACA...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAGTGACATTTTGCATCTaGCATAGCAGTACACCTAGA +
Preference number: 2 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTVTFCI*HSSTPR
Trigger: TCTAGGTGTACTGCTATGTCAGATGCAAAATGTCAC...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTCACTATGTAACAAGTaGTTTTGGCTCCTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMSLCNK*FWLLSS
Trigger: GCTGGAGAGGAGCCAAAAGCACTTGTTACATAGTGA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGAERRM*SRQVFL
Trigger: CAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGC...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAACCCAGCCACAGCTGCTaGGAAGTCACAGCACAGCCC +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKPSHSC*EVTAQP
Trigger: GGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCTGGG...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 90 bp AGGATGTGGTCTAGGCAAGTCTTCTTGTGTCCAAGGAGATGTTTCTaGGGTGAATCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTG +
Preference number: 2 (lower is better)
Translates to: RMWSRQVFLCPRRCF*GESAAQSLNPLGAL
Trigger: CAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGGACACAAGAAGACTTGCCTAGACCACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTCAAGGCATGTGGACTaGAATACCTTGATGGTACTT +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMSRHVD*NTLMVL
Trigger: AAGTACCATCAAGGTATTTCAGTCCACATGCCTTGA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCTGCACTTGAGTCCTTaGGATGTATCTCTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDLHLSP*DVSLLR
Trigger: CCTAAGAAGAGATACATCTCAAGGACTCAAGTGCAG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCCCAACAAACGATAAATaGACGGGCAAGACATGGCAG +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGPTNDK*TGKTWQ
Trigger: CTGCCATGTCTTGCCCGTTCATTTATCGTTTGTTGG...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATTCCGGCGGAAGGCCTTaGCGCATTTGTCGCACTCAT +
Preference number: 2 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNSGGRP*RICRTH
Trigger: ATGAGTGCGACAAATGCGGCAAGGCCTTCCGCCGGA...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR GCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAATCGTCCTAATGTTCTaGAAATATGGTCTTATGGCT +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGIVLMF*KYGLMA
Trigger: AGCCATAAGACCATATTTGCAGAACATTAGGACGAT...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACAAAGGATGGCTGGGCTaGTTGCTCCCAGACCAAGTT +
Preference number: 2 (lower is better)
Translates to: YRTHVKATDCIEREHGFHKGWLG*LLPDQV
Trigger: AACTTGGTCTGGGAGCAAGCAGCCCAGCCATCCTTT...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATCTGCTAGGAAGCTCTaGCTCAGCCTTGGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKSARKL*LSLGGP
Trigger: GGGCCCACCAAGGCTGAGGCAGAGCTTCCTAGCAGA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTGGACTATTCTGGAAATaGAAGAGTGGGGTGACACAG +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRAGLFWK*KSGVTQ
Trigger: CTGTGTCACCCCACTCTTGCATTTCCAGAATAGTCC...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCATCTCTTCAGGAAAGCTaGGATCACATTATGAGGACG +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPSLQES*DHIMRT
Trigger: CGTCCTCATAATGTGATCCCAGCTTTCCTGAAGAGA...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTGCAGTCACAGAGTTCTaGCTAATCTATGATGGGAGC +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRAAVTEF*LIYDGS
Trigger: GCTCCCATCATAGATTAGCCAGAACTCTGTGACTGC...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCACAGCACAGCCCTGGTaGGGCTGGCTTCTATCTGTG +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCTAQPW*GWLLSV
Trigger: CACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGT...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCTGGAAATGCAAGAGTaGGGTGACACAGCTAATGGA +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRALEMQE*GDTANG
Trigger: TCCATTAGCTGTGTCACCCCACTCTTGCATTTCCAG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACTCAAGGCATGTGGACTaGAATACCTTGATGGTACTT +
Preference number: 2 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDSRHVD*NTLMVL
Trigger: AAGTACCATCAAGGTATTTCAGTCCACATGCCTTGA...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGAGTAAAATGATTTCGTaGAAGGGAGGGTGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMSKMIS*KGGWQK
Trigger: TTTTTGCCACCCTCCCTTTCACGAAATCATTTTACT...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGGAGTCAGAGTAAAATaGTTTCGTGAAAGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGGVRVK*FREREG
Trigger: ACCCTCCCTTTCACGAAATCATTTTACTCTGACTCC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTACTGCACTTGAGTCCTTaGGATGTATCTCTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLLHLSP*DVSLLR
Trigger: CCTAAGAAGAGATACATCTCAAGGACTCAAGTGCAG...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCACTAGTCAAAGGAGATaGACGGACCATTTGCATGCA +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGTSQRR*TDHLHA
Trigger: TGCATGCAAATGGTCCGTTCATCTCCTTTGACTAGT...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGGTGTACTCACCTTCTaGTGGGCTGGGGTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKGVLTF*WAGVAA
Trigger: AGCTGCAACCCCAGCCCATCAGAAGGTGAGTACACC...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGTCAGGATGGGTGCCTaGGAAGCCCTTCCAAGTTGT +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCVRMGA*EALPSC
Trigger: ACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGAC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGTCAGGATGGGTGCCTaGGAAGCCCTTCCAAGTTGT +
Preference number: 2 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDVRMGA*EALPSC
Trigger: ACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGAC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTACCAGAGGCAAGAAATaGTCTTGGCGAAATTACAGG +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRATRGKK*SWRNYR
Trigger: CCTGTAATTTCGCCAAGATCATTTCTTGCCTCTGGT...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGGCTCCCCACACCTTCTaGTGCCTAGAAGCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEAPHTF*CLEASV
Trigger: AACAGAAGCTTCTAGGCATCAGAAGGTGTGGGGAGC...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCATCGTCCTAATGTTCTaGAAATATGGTCTTATGGCT +
Preference number: 2 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPIVLMF*KYGLMA
Trigger: AGCCATAAGACCATATTTGCAGAACATTAGGACGAT...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGACTCTTCTTAGGGGCATaGTCTCAACTATTTTATTTT +
Preference number: 2 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGLFLGA*SQLFYF
Trigger: AAAATAAAATAGTTGAGAGCATGCCCCTAAGAAGAG...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACACTCTTCTTAGGGGCATaGTCTCAACTATTTTATTTT +
Preference number: 2 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTLFLGA*SQLFYF
Trigger: AAAATAAAATAGTTGAGAGCATGCCCCTAAGAAGAG...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACTGATGGGCTGGGGTTaGAGCTTTTTGTTTGTAATT +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPLMGWG*SFLFVI
Trigger: AATTACAAACAAAAAGCTGCAACCCCAGCCCATCAG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCAAAAACATGCCCGCTaGAATTGGGTAGGGACTATT +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRAQKHAR*NWVGTI
Trigger: AATAGTCCCTACCCAATTGCAGCGGGCATGTTTTTG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACATGAGGACGCCATCGTaGAACAGCTCTGTGTGTTTC +
Preference number: 2 (lower is better)
Translates to: YRTHVKATDCIEREHGFHMRTPS*NSSVCF
Trigger: GAAACACACAGAGCTGTTCCACGATGGCGTCCTCAT...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTTCTCTTCAGGAAAGCTaGGATCACATTATGAGGACG +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRASLQES*DHIMRT
Trigger: CGTCCTCATAATGTGATCCCAGCTTTCCTGAAGAGA...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGCTGGCTTCTATCTGTaGCTTCTGTGGGCCACTGGA +
Preference number: 2 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDAGFYL*LLWATG
Trigger: TCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAACAAAATCAAGCACATaGAATGCAACACCACTCAAA +
Preference number: 2 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTTKSST*NATPLK
Trigger: TTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 90 bp GATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATaGAAAGAGAACACGGGTTTCACCGCAAACACCATGAACAGCTGT +
Preference number: 2 (lower is better)
Translates to: DLGEITGHTLKPQTA*KENTGFTANTMNSC
Trigger: ACAGCTGTTCATGGTGTTTGCGGTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATACTGTTCATCTCCTTTaGCTCTGCCATCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNTVHLL*LCHPLW
Trigger: CCAGAGGGGATGGCAGAGTCAAAGGAGATGAACAGT...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCGTTTGGCCTCACAATaGCATTTTGGGTGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRARLASQ*HFGCFK
Trigger: TTTAAAGCACCCAAAATGTCATTGTGAGGCCAAACG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTTGTGGCTATAGGAAGTaGTGCCAGAACACATGGGTG +
Preference number: 2 (lower is better)
Translates to: INERARHGRVLLGKGARLCGYRK*CQNTWV
Trigger: CACCCATGTGTTCTGGCATCACTTCCTATAGCCACA...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCCAATGGGATCCCTCATaGAACCCAACAAACGATAAA +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGQWDPS*NPTNDK
Trigger: TTTATCGTTTGTTGGGTTTCATGAGGGATCCCATTG...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGTGACATTTTGCATCTaGCATAGCAGTACACCTAGA +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGVTFCI*HSSTPR
Trigger: TCTAGGTGTACTGCTATGTCAGATGCAAAATGTCAC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTCAGAAGGGTTCCACTaGCCTCCAAACCTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGSEGFH*PPNLCF
Trigger: AAAGCAAAGGTTTGGAGGGCAGTGGAACCCTTCTGA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGCTTATAAATTGCTGGTaGCAGTATAAATCGGTCTCA +
Preference number: 2 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMLINCW*QYKSVS
Trigger: TGAGACCGATTTATACTGCCACCAGCAATTTATAAG...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATTCTCTTCAGGAAAGCTaGGATCACATTATGAGGACG +
Preference number: 2 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNSLQES*DHIMRT
Trigger: CGTCCTCATAATGTGATCCCAGCTTTCCTGAAGAGA...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGCTGGCTTCTATCTGTaGCTTCTGTGGGCCACTGGA +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKAGFYL*LLWATG
Trigger: TCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGC...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATTGGACTGAAATACCTTaGTGGTACTTCCTACCAGTT +
Preference number: 2 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNWTEIP*WYFLPV
Trigger: AACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCA...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTAGTAAAATGATTTCGTaGAAGGGAGGGTGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRASKMIS*KGGWQK
Trigger: TTTTTGCCACCCTCCCTTTCACGAAATCATTTTACT...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACGCATAAGAGAAAGATaGGACTGGTGGTCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKRIRER*DWWSGG
Trigger: GCCTCCTGACCACCAGTCTCATCTTTCTCTTATGCG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGACTAGTCAAAGGAGATaGACGGACCATTTGCATGCA +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGTSQRR*TDHLHA
Trigger: TGCATGCAAATGGTCCGTTCATCTCCTTTGACTAGT...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATCTGATGGGCTGGGGTTaGAGCTTTTTGTTTGTAATT +
Preference number: 2 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNLMGWG*SFLFVI
Trigger: AATTACAAACAAAAAGCTGCAACCCCAGCCCATCAG...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGATGAGGAAAGAGCCTaGTTCTCTGGCCCATTTCCA +
Preference number: 2 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDDEERA*FSGPFP
Trigger: TGGAAATGGGCCAGAGAAGCAGGCTCTTTCCTCATC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCACACTTATAAATTGCTaGTGGCAGTATAAATCGGTC +
Preference number: 2 (lower is better)
Translates to: ISNESLMKGSSLSDRAELTLINC*WQYKSV
Trigger: GACCGATTTATACTGCCACCAGCAATTTATAAGTGT...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTACACTTATAAATTGCTaGTGGCAGTATAAATCGGTC +
Preference number: 2 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGTLINC*WQYKSV
Trigger: GACCGATTTATACTGCCACCAGCAATTTATAAGTGT...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAAATGTTCTGCAAATATaGTCTTATGGCTTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPNVLQI*SYGLGE
Trigger: TTCTCCCAAGCCATAAGACCATATTTGCAGAACATT...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGGTTGGATAGTCAAGTaGTGCCCACAGATAGACAGG +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCGWIVK*CPQIDR
Trigger: CCTGTCTATCTGTGGGCACCACTTGACTATCCAACC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACCAAGGAGATGTTTCTTaGGTGAATCTGCTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: YRTHVKATDCIEREHGFHQGDVS*VNLLLS
Trigger: ACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTG...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTCAAGGCATGTGGACTaGAATACCTTGATGGTACTT +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGSRHVD*NTLMVL
Trigger: AAGTACCATCAAGGTATTTCAGTCCACATGCCTTGA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCTTTATGCTACGTTCTaGGTTAATGCTGCATTCAAT +
Preference number: 2 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRALYATF*VNAAFN
Trigger: ATTGAATGCAGCATTAACTCAGAACGTAGCATAAAG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATCACCGCAAACACCATaGACAGCTGTTCTGTCAACC +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKSPQTP*TAVLST
Trigger: GGTTGACAGAACAGCTGTTCATGGTGTTTGCGGTGA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGCATAGTAACAAGGTTTaGAGGAGGAACATCTCATGC +
Preference number: 2 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGHSNKV*RRNISC
Trigger: GCATGAGATGTTCCTCCTTCAAACCTTGTTACTATG...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGGACTATTCTGGAAATaGAAGAGTGGGGTGACACAG +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCGLFWK*KSGVTQ
Trigger: CTGTGTCACCCCACTCTTGCATTTCCAGAATAGTCC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCATCAAGCACATGGAATaGAACACCACTCAAAAACAT +
Preference number: 2 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGIKHME*NTTQKH
Trigger: ATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGAT...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTAACACTTATAAATTGCTaGTGGCAGTATAAATCGGTC +
Preference number: 2 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLTLINC*WQYKSV
Trigger: GACCGATTTATACTGCCACCAGCAATTTATAAGTGT...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAGGTTGGATAGTCAAGTaGTGCCCACAGATAGACAGG +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKGWIVK*CPQIDR
Trigger: CCTGTCTATCTGTGGGCACCACTTGACTATCCAACC...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCAERRM*SRQVFL
Trigger: CAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAATCAGAAGGGTTCCACTaGCCTCCAAACCTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKSEGFH*PPNLCF
Trigger: AAAGCAAAGGTTTGGAGGGCAGTGGAACCCTTCTGA...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTATATGGTCTTATGGCTTaGGAGAAAATTTCTAATGAG +
Preference number: 2 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLYGLMA*EKISNE
Trigger: CTCATTAGAAATTTTCTCCCAAGCCATAAGACCATA...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAACACCTTCTGATGGGCTaGGGTTGCAGCTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKHLLMG*GCSFLF
Trigger: AAACAAAAAGCTGCAACCCCAGCCCATCAGAAGGTG...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCAAGGAGATGTTTCTTaGGTGAATCTGCTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCQGDVS*VNLLLS
Trigger: ACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCTGGACTGAAATACCTTaGTGGTACTTCCTACCAGTT +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCWTEIP*WYFLPV
Trigger: AACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCA...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGTGACATTTTGCATCTaGCATAGCAGTACACCTAGA +
Preference number: 2 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDVTFCI*HSSTPR
Trigger: TCTAGGTGTACTGCTATGTCAGATGCAAAATGTCAC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGAATGAGGTAGATGCATaGATGCACAGACAAGGATAT +
Preference number: 2 (lower is better)
Translates to: QTGVGHSYCSQRYANDIENEVDA*MHRQGY
Trigger: ATATCCTTGTCTGTGCATTCATGCATCTACCTCATT...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATCTCTTCTTAGGGGCATaGTCTCAACTATTTTATTTT +
Preference number: 2 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNLFLGA*SQLFYF
Trigger: AAAATAAAATAGTTGAGAGCATGCCCCTAAGAAGAG...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGCTTATAAATTGCTGGTaGCAGTATAAATCGGTCTCA +
Preference number: 2 (lower is better)
Translates to: CSVLAELIWPRSGVANHMLINCW*QYKSVS
Trigger: TGAGACCGATTTATACTGCCACCAGCAATTTATAAG...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACAATGTTCTGCAAATATaGTCTTATGGCTTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: YRTHVKATDCIEREHGFHNVLQI*SYGLGE
Trigger: TTCTCCCAAGCCATAAGACCATATTTGCAGAACATT...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACGTTTGGCCTCACAATaGCATTTTGGGTGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKRLASQ*HFGCFK
Trigger: TTTAAAGCACCCAAAATGTCATTGTGAGGCCAAACG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAACTGATGGGCTGGGGTTaGAGCTTTTTGTTTGTAATT +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKLMGWG*SFLFVI
Trigger: AATTACAAACAAAAAGCTGCAACCCCAGCCCATCAG...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR GCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGAATAAGAGAACAGGGTaGACTGTGATTTCACTCATT +
Preference number: 2 (lower is better)
Translates to: QTGVGHSYCSQRYANDIENKRTG*TVISLI
Trigger: AATGAGTGAAATCACAGTGCACCCTGTTCTCTTATT...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR TCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCTTTATGCTACGTTCTaGGTTAATGCTGCATTCAAT +
Preference number: 2 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCLYATF*VNAAFN
Trigger: ATTGAATGCAGCATTAACTCAGAACGTAGCATAAAG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAATATGGTCTTATGGCTTaGGAGAAAATTTCTAATGAG +
Preference number: 2 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKYGLMA*EKISNE
Trigger: CTCATTAGAAATTTTCTCCCAAGCCATAAGACCATA...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATATGGTCTTATGGCTTaGGAGAAAATTTCTAATGAG +
Preference number: 2 (lower is better)
Translates to: NDLGEITGHTLKPQTALKYGLMA*EKISNE
Trigger: CTCATTAGAAATTTTCTCCCAAGCCATAAGACCATA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp CAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTaGCAGGCCCTCCTAGTGTCCCTGTCCCCAGCCACA +
Preference number: 3 (lower is better)
Translates to: QPWWAHEKGTLP*QALLVSLSPAT
Trigger: TGTGGCTGGGGACAGGGACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp TGGGGCTGGCTTCTATCTGTGGCTTCTGTGGGCCACTaGAGGGGCAGGTTCCTCGCTAGCCCTTGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: WGWLLSVASVGH*RGRFLASPCCC
Trigger: ACAGCAGCAAGGGCTAGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp AGCTGCTGGGAAGTCACAGCACAGCCCTGGTGGGGCTaGCTTCTATCTGTGGCTTCTGTGGGCCACTGGAGG +
Preference number: 3 (lower is better)
Translates to: SCWEVTAQPWWG*LLSVASVGHWR
Trigger: CCTCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGTGACTTCCCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp AGCCACAGCTGCTGGGAAGTCACAGCACAGCCCTGGTaGGGCTGGCTTCTATCTGTGGCTTCTGTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: SHSCWEVTAQPW*GWLLSVASVGH
Trigger: GTGGCCCACAGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp GTGTACCTCCATACCAGGCCGGTGGTCCTGGCACTCTaGAGCCACGATGGCAGTCCTCGTGATAACCTTCGG +
Preference number: 3 (lower is better)
Translates to: VYLHTRPVVLAL*SHDGSPRDNLR
Trigger: CCGAAGGTTATCACGAGGACTGCCATCGTGGCTGCAGAGTGCCAGGACCACCGGCCTGGTATGGAGGTACAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp GGCAGGTTCCTCGCTAGCCCTTGCTGCTGTTCCTCTTaGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAG +
Preference number: 3 (lower is better)
Translates to: GRFLASPCCCSS*GSPLEMVAQTQ
Trigger: CTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGAGGAACAGCAGCAAGGGCTAGCGAGGAACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp TTTCTACTCGTGGTGGGTTGGCTGATGCTTCTGCAGTaGCGAGCGCCTCTTGAACACGCGGCCACACTGGCT +
Preference number: 3 (lower is better)
Translates to: FLLVVGWLMLLQ*RAPLEHAATLA
Trigger: AGCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAGCCAACCCACCACGAGTAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR GCA 72 bp GAGAAGCCCTTCCAAGTTGTGTCTGCTAGGAAGCTCTaGCTCAGCCTTGGTGGGCCCACGAGAAGGGCACAC +
Preference number: 3 (lower is better)
Translates to: EKPFQVVSARKL*LSLGGPTRRAH
Trigger: GTGTGCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp TCGGAGCATTGCCAAGGCTCCCAGGAGCTCAAAGGATaGCTGGGCTGCTTGCTCCCAGACCAAGTTTGGACC +
Preference number: 3 (lower is better)
Translates to: SEHCQGSQELKG*LGCLLPDQVWT
Trigger: GGTCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTGGGAGCCTTGGCAATGCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAAGTGCCGAGCGCCTCTaGAACACGCGGCCACACTGG +
Preference number: 3 (lower is better)
Translates to: DSQVVPTDRQGVRISDEESAERL*NTRPHW
Trigger: CCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACT...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
3UTR-3UTR CAA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGCCGCAGTGGTCAGGTaGGATAGTCAAGTGGTGCCC +
Preference number: 3 (lower is better)
Translates to: VPLRASALLPSLRCGYRKAAVVR*DSQVVP
Trigger: GGGCACCACTTGACTATCCAACCTGACCACTGCGGC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAAGCTCTGCCTCAGCCTaGGTGGGCCCACGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPSSASA*VGPREG
Trigger: CCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGCT...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp TGCCAAGGCTCCCAGGAGCTCAAAGGATGGCTGGGCTaGTTGCTCCCAGACCAAGTTTGGACCACTCCATTG +
Preference number: 3 (lower is better)
Translates to: CQGSQELKGWLG*LLPDQVWTTPL
Trigger: CAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTGGGAGCCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp TCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTaGTGCCCACAGATAGACAGGGAGTCCGCATCTCGG +
Preference number: 3 (lower is better)
Translates to: SSVPQWSGWIVK*CPQIDRESASR
Trigger: CCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp AGCATTGCCAAGGCTCCCAGGAGCTCAAAGGATGGCTaGGCTGCTTGCTCCCAGACCAAGTTTGGACCACTC +
Preference number: 3 (lower is better)
Translates to: SIAKAPRSSKDG*AACSQTKFGPL
Trigger: GAGTGGTCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTGGGAGCCTTGGCAATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp AGTGCTTTTGGCTCCTCTCCAGCCTGGGGGTCAGGATaGGTGCCTGAGAAGCCCTTCCAAGTTGTGTCTGCT +
Preference number: 3 (lower is better)
Translates to: SAFGSSPAWGSG*VPEKPFQVVSA
Trigger: AGCAGACACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCCAAAAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp AGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTaGCCACAGATAGACAGGGAGTCCGCATCTCGGATG +
Preference number: 3 (lower is better)
Translates to: SVPQWSGWIVKW*PQIDRESASRM
Trigger: CATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp GATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTaGATAGTCAAGTGGTGCCCACAGATAGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: DGSISSVPQWSG*IVKWCPQIDRE
Trigger: CTCCCTGTCTATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCGCTCCCAGACCAAGTTaGGACCACTCCATTGATCTA +
Preference number: 3 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLAPRPS*DHSIDL
Trigger: TAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGC...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGAAGGGCACACTTCCTaGCCAGGCCCTCCTAGTGTC +
Preference number: 3 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPEGHTS*PGPPSV
Trigger: GACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACATGCTCTGATGATTGCTaGCTGCCCTTGGGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTCSDDC*LPLGQV
Trigger: CACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCA...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp CACTATGTAACAAGTGCTTTTGGCTCCTCTCCAGCCTaGGGGTCAGGATGGGTGCCTGAGAAGCCCTTCCAA +
Preference number: 3 (lower is better)
Translates to: HYVTSAFGSSPA*GSGWVPEKPFQ
Trigger: TTGGAAGGGCTTCTCAGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCCAAAAGCACTTGTTACATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCACCCCACATCCAGATTaGTCCTCTCTCATTCTTGGA +
Preference number: 3 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLTPHPD*SSLILG
Trigger: TCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGT...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTAATCCACTCGGAGCATaGCCAAGGCTCCCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGNPLGA*PRLPGA
Trigger: AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATT...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGACCAAGGAGATGTTTCTaGGGTGAATCTGCTGCTCAG +
Preference number: 3 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGPRRCF*GESAAQ
Trigger: CTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGG...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAACATGCCCGCTGCAATaGGGTAGGGACTATTCTGGA +
Preference number: 3 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTTCPLQ*GRDYSG
Trigger: TCCAGAATAGTCCCTACCCAATTGCAGCGGGCATGT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp GGAGATGTTTCTTGGGTGAATCTGCTGCTCAGTCACTaGATCCACTCGGAGCATTGCCAAGGCTCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GDVSWVNLLLSH*IHSEHCQGSQE
Trigger: CTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGATTCACCCAAGAAACATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp GTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATaGTCTGATGATTGCTTGCTGCCCTTGGGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: VVSVVHHVLSAL*SDDCLLPLGQV
Trigger: CACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTAGCTCTGCCTCAGCCTaGGTGGGCCCACGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: INERARHGRVLLGKGARLSSASA*VGPREG
Trigger: CCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGCT...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp ACTATGACAATGACAATGACAGCAGATGGCCTTCACTaGGTGTGTACCTCCATACCAGGCCGGTGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: TMTMTMTADGLH*VCTSIPGRWSW
Trigger: CCAGGACCACCGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCACCCCACATCCAGATTaGTCCTCTCTCATTCTTGGA +
Preference number: 3 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPTPHPD*SSLILG
Trigger: TCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGT...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACCGAGCCTCTGCTCTGTaGCCCTCACTTAGGTGTGGC +
Preference number: 3 (lower is better)
Translates to: YRTHVKATDCIEREHGFHRASAL*PSLRCG
Trigger: GCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCG...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATAGCTCTGCCTCAGCCTaGGTGGGCCCACGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDSSASA*VGPREG
Trigger: CCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGCT...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGAATCCACTCGGAGCATaGCCAAGGCTCCCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: CSVLAELIWPRSGVANHMNPLGA*PRLPGA
Trigger: AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGAAGGGCACACTTCCTaGCCAGGCCCTCCTAGTGTC +
Preference number: 3 (lower is better)
Translates to: INERARHGRVLLGKGARLEGHTS*PGPPSV
Trigger: GACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTC...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp CTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTaGTCAGGTTGGATAGTCAAGTGGTGCCCACAGATA +
Preference number: 3 (lower is better)
Translates to: LIYDGSISSVPQ*SGWIVKWCPQI
Trigger: TATCTGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp CCTTGGGTCAGGTGTTCAGTTCTGGCTGAATTAATATaGCCTAGAAGCGGGGTGGCAAATCACATGGTACGC +
Preference number: 3 (lower is better)
Translates to: PWVRCSVLAELI*PRSGVANHMVR
Trigger: GCGTACCATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACACCTGACCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGTCTGATGGGCTGGGGTaGCAGCTTTTTGTTTGTAAT +
Preference number: 3 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWSDGLG*QLFVCN
Trigger: ATTACAAACAAAAAGCTGCAACCCCAGCCCATCAGA...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTGCTCCCAGACCAAGTTaGGACCACTCCATTGATCTA +
Preference number: 3 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRAAPRPS*DHSIDL
Trigger: TAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGC...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGTCCTGGGCATGGCTGTaGCAAATCATAGCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: QTGVGHSYCSQRYANDIESWAWL*QIIAQG
Trigger: GCCCTGGGCTATGATTTGCAACAGCCATGCCCAGGA...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp GGCAACGTTCTCTTCAGGAAAGCTGGGATCACATTATaGGGACGCCATCGTGGAACAGCTCTGTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: GNVLFRKAGITL*GRHRGTALCVS
Trigger: AGAAACACACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAGAGAACGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp GCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTaGTGCCAGAACACATGGGTGAATTTTCCCCTAGCT +
Preference number: 3 (lower is better)
Translates to: ALLPSLRCGYRK*CQNTWVNFPLA
Trigger: AGCTAGGGGAAAATTCACCCATGTGTTCTGGCATCACTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATaGCCTTCACTGAGTGTGTACCTCCATACCAGGCCG +
Preference number: 3 (lower is better)
Translates to: DGNNYDNDNDSR*PSLSVYLHTRP
Trigger: CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp TTTGCATTTCAGATCTGGAAGGCCTGGTGGTGTCCGTaGTCCATCATGTTCTGTCAGCTCTATGCTCTGATG +
Preference number: 3 (lower is better)
Translates to: FAFQIWKAWWCP*SIMFCQLYALM
Trigger: CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTTCCAGATCTGAAATGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp ACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTaGCCAGGAAGCAGCCAAGTGGCAAAACACAATAGA +
Preference number: 3 (lower is better)
Translates to: TFEQVFMQSGAT*PGSSQVAKHNR
Trigger: TCTATTGTGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACTCTAGGCAAGTCTTCTaGTGTCCAAGGAGATGTTTC +
Preference number: 3 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDSRQVF*CPRRCF
Trigger: GAAACATCTCCTTGGACACAAGAAGACTTGCCTAGA...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCTCCTGGGCATGGCTGTaGCAAATCATAGCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCSWAWL*QIIAQG
Trigger: GCCCTGGGCTATGATTTGCAACAGCCATGCCCAGGA...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp GTGAATTTTCCCCTAGCTGCCCACAGCAGAAGCCTATaGACCAATCTCTTTCTAGTTCTAGAGTCACCGGCT +
Preference number: 3 (lower is better)
Translates to: VNFPLAAHSRSL*TNLFLVLESPA
Trigger: AGCCGGTGACTCTAGAACTAGAAAGAGATTGGTTCATAGGCTTCTGCTGTGGGCAGCTAGGGGAAAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp ACGATGGCAGTCCTCGTGATAACCTTCGGAGGTAGGTaGTGTGATCACCCCTGTTTTATAGAACAAGAAACG +
Preference number: 3 (lower is better)
Translates to: TMAVLVITFGGR*CDHPCFIEQET
Trigger: CGTTTCTTGTTCTATAAAACAGGGGTGATCACAGCACCTACCTCCGAAGGTTATCACGAGGACTGCCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp CTAGAAGCTTCTGTTTCCTTGTTTGCATTTCAGATCTaGAAGGCCTGGTGGTGTCCGTGGTCCATCATGTTC +
Preference number: 3 (lower is better)
Translates to: LEASVSLFAFQI*KAWWCPWSIMF
Trigger: GAACATGATGGACCACGGACACCACCAGGCCTTCCAGATCTGAAATGCAAACAAGGAAACAGAAGCTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGCCAAGGAGATGTTTCTaGGGTGAATCTGCTGCTCAG +
Preference number: 3 (lower is better)
Translates to: CSVLAELIWPRSGVANHMPRRCF*GESAAQ
Trigger: CTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGG...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGGATTGCTTGCTGCCCTaGGGTCAGGTGTTCAGTTCT +
Preference number: 3 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEDCLLP*GQVFSS
Trigger: AGAACTGAACACCTGACCCAAGGGCAGCAAGCAATC...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACATGCCCGCTGCAATaGGGTAGGGACTATTCTGGA +
Preference number: 3 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDTCPLQ*GRDYSG
Trigger: TCCAGAATAGTCCCTACCCAATTGCAGCGGGCATGT...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp GGATATGTGACAGGAAGCTGGGTGACATTTTGCATCTaGCATAGCAGTACACCTAGAGAGCCCAAGGAAATC +
Preference number: 3 (lower is better)
Translates to: GYVTGSWVTFCI*HSSTPREPKEI
Trigger: GATTTCCTTGGGCTCTCTAGGTGTACTGCTATGTCAGATGCAAAATGTCACCCAGCTTCCTGTCACATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp TGGCGAAATTACAGGACACACGTTAAAGCCACAGACTaGATTGAAAGAGAACACGGGTTTCACCGCAAACAC +
Preference number: 3 (lower is better)
Translates to: WRNYRTHVKATD*IEREHGFHRKH
Trigger: GTGTTTGCGGTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp TTTCTAGTTCTAGAGTCACCGGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTGTGTCCAAGGAGATGT +
Preference number: 3 (lower is better)
Translates to: FLVLESPAERRM*SRQVFLCPRRC
Trigger: ACATCTCCTTGGACACAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGCCGGTGACTCTAGAACTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp TGTCAGCTCTATGCTCTGATGATTGCTTGCTGCCCTTaGGTCAGGTGTTCAGTTCTGGCTGAATTAATATGG +
Preference number: 3 (lower is better)
Translates to: CQLYALMIACCP*VRCSVLAELIW
Trigger: CCATATTAATTCAGCCAGAACTGAACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCATAGAGCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp AAGGAAATCCACCCCCAAGTTACCAGAGGCAAGAAATaGTCTTGGCGAAATTACAGGACACACGTTAAAGCC +
Preference number: 3 (lower is better)
Translates to: KEIHPQVTRGKK*SWRNYRTHVKA
Trigger: GGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATTTCTTGCCTCTGGTAACTTGGGGGTGGATTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACCCCACATCCAGATTaGTCCTCTCTCATTCTTGGA +
Preference number: 3 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDTPHPD*SSLILG
Trigger: TCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGT...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp AATCAAGCACATGGAATGCAACACCACTCAAAAACATaGCCGCTGCAATTGGGTAGGGACTATTCTGGAAAT +
Preference number: 3 (lower is better)
Translates to: NQAHGMQHHSKT*PLQLGRDYSGN
Trigger: ATTTCCAGAATAGTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp AAGAGAACAGGGTGCACTGTGATTTCACTCATTTTATaGCCCGCATGTGGTGGGTTCAGTAAAGGAACAATA +
Preference number: 3 (lower is better)
Translates to: KRTGCTVISLIL*PACGGFSKGTI
Trigger: TATTGTTCCTTTACTGAACCCACCACATGCGGGCCATAAAATGAGTGAAATCACAGTGCACCCTGTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp TCATGCACGTGCGTGGAAACCCAATTGTCATGTGTATaGACTACAAAAGGATCGGGAAAAGAACACATTTCC +
Preference number: 3 (lower is better)
Translates to: SCTCVETQLSCV*TTKGSGKEHIS
Trigger: GGAAATGTGTTCTTTTCCCGATCCTTTTGTAGTTCATACACATGACAATTGGGTTTCCACGCACGTGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp ACAAGGTTTGAAGGAGGAACATCTCATGCACGTGCGTaGAAACCCAATTGTCATGTGTATGAACTACAAAAG +
Preference number: 3 (lower is better)
Translates to: TRFEGGTSHARA*KPNCHVYELQK
Trigger: CTTTTGTAGTTCATACACATGACAATTGGGTTTCCACGCACGTGCATGAGATGTTCCTCCTTCAAACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR GCA 72 bp GCTACTCTTGATGGGCATAACGTAACACTTATAAATTaGTGGTGGCAGTATAAATCGGTCTCAACCTTTTGG +
Preference number: 3 (lower is better)
Translates to: ATLDGHNVTLIN*WWQYKSVSTFW
Trigger: CCAAAAGGTTGAGACCGATTTATACTGCCACCAGCAATTTATAAGTGTTACGTTATGCCCATCAAGAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp CATTCTTGGATTCAAGGCATGTGGACTGAAATACCTTaGTGGTACTTCCTACCAGTTAAACTAGCCAAACTA +
Preference number: 3 (lower is better)
Translates to: HSWIQGMWTEIP*WYFLPVKLAKL
Trigger: TAGTTTGGCTAGTTTAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CCA 72 bp ACTCTTGATGGGCATAACGTAACACTTATAAATTGCTaGTGGCAGTATAAATCGGTCTCAACCTTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: TLDGHNVTLINC*WQYKSVSTFWK
Trigger: CTTCCAAAAGGTTGAGACCGATTTATACTGCCACCAGCAATTTATAAGTGTTACGTTATGCCCATCAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR-3UTR CAA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAATATCCGAAGGTAAGTaGATAACTAGTCAAAGGAGA +
Preference number: 3 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKISEGK*ITSQRR
Trigger: TCTCCTTTGACTAGTTATCAACTTACCTTCGGATAT...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR TCA 72 bp CAACAGGAATACATGAGATTAGAAAGAAAACCGGAATaGGGTAGATGCATGAATGCACAGACAAGGATATGT +
Preference number: 3 (lower is better)
Translates to: QQEYMRLERKPE*GRCMNAQTRIC
Trigger: ACATATCCTTGTCTGTGCATTCATGCATCTACCTCATTCCGGTTTTCTTTCTAATCTCATGTATTCCTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTTCCGCCGGTGGCGACTaGGGCCGGAGCTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSSAGGD*GRSSGG
Trigger: TCCGCCGGAGCTCCGGCCTCAGTCGCCACCGGCGGA...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACGCCGCGCCCCACTGTaGATCCGCCGGTGGCGACTG +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSRRAPL*IRRWRL
Trigger: CAGTCGCCACCGGCGGATCCACAGTGGGGCGCGGCG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACCACGGAGCCGCCCGTaGCCAGCCGAGCTAACAGCC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSPRSRP*PAELTA
Trigger: GGCTGTTAGCTCGGCTGGGCACGGGCGGCTCCGTGG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTTCCGCCGGTGCTTGGTaGGCTCCGAGCTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSSAGAW*APSSFG
Trigger: TCCGAAGGAGCTCGGAGCTCACCAAGCACCGGCGGA...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTGTGTGGATCCGCCGGTaGTTGGTGAGCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSVWIRR*LVSSEL
Trigger: GAGCTCGGAGCTCACCAAGCACCGGCGGATCCACAC...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTGTGGATGCGTGCGTaGTCCAGGAGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSLWMRA*SRRLEL
Trigger: GAGCTCCAGCCTCCTGGAGCACGCACGCATCCACAG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370249.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACACAGGCAGGCCTGGCGTaGCAGGAAGCGCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTQAGLA*QEAPRS
Trigger: GCTCCGTGGCGCTTCCTGCCACGCCAGGCCTGCCTG...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTCTACTGGGGCCGGGCTaGGGCTCCGCAGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGALLGPG*GSAATW
Trigger: CCACGTAGCTGCGGAGCCCCAGCCCGGCCCCAGTAG...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACATCTCCAGGGCCCTACTaGGGCCGGGCTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTSPGPY*GRAGAP
Trigger: CGGAGCCCCAGCCCGGCCCCAGTAGGGCCCTGGAGA...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGATGCTTCTGCAGTGCCGAGCGCCTCTTGAACACGCGGCCACACTGGCTGCAGCTTCTGTGGGCCACTaGAGGGGCAGGTTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LMLLQCRAPLEHAATLAAASVGH*RGRFLA
Trigger: AGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGC...TGCAGCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR TCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGTCCGCCGGTGGCGACTaGGGCCGGAGCTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPSAGGD*GRSSGG
Trigger: TCCGCCGGAGCTCCGGCCTCAGTCGCCACCGGCGGA...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACCACGGAGCCGCCCGTaGCCAGCCGAGCTAACAGCC +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTPRSRP*PAELTA
Trigger: GGCTGTTAGCTCGGCTGGGCACGGGCGGCTCCGTGG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTCCCTGCTGCACGCCTTaGAGGCGAAAGGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSPCCTP*RRKAFP
Trigger: CGGAAAAGCCTTTCGCCTGCAAGGCGTGCAGCAGGG...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACCCTGCTGCACGCCTTaGAGGCGAAAGGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSPCCTP*RRKAFP
Trigger: CGGAAAAGCCTTTCGCCTGCAAGGCGTGCAGCAGGG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTTCCTTCGGAAGAGCTTaGCGCAGTGGGGACACCCGT +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSSFGRA*RSGDTR
Trigger: ACGGGTGTCCCCACTGCGGCAAGCTCTTCCGAAGGA...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATCGCGGCCACACTGGCTaGATTCGCAGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNRGHTG*IRSAAP
Trigger: GGGCGCGGCGCTGCGAATGCAGCCAGTGTGGCCGCG...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTCGCTAGCCCTTGCTaGTGTTCCTCTTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSLASPC*CSSWGS
Trigger: GCTCCCCCAAGAGGAACAGCAGCAAGGGCTAGCGAG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCATCTGCTAGGAAGCTCTaGCTCAGCCTTGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSSARKL*LSLGGP
Trigger: GGGCCCACCAAGGCTGAGGCAGAGCTTCCTAGCAGA...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTAGTCCCCGTGCTGTCTaGATTCAGGACTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSSPRAV*IQDWDH
Trigger: GTGGTCCCAGTCCTGAATTCAGACAGCACGGGGACT...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGCTCGGCCAGCCCGTTaGCCCCTCGGAAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKARPAR*PLGRTC
Trigger: GCAAGTCCTTCCGAGGGGTCAACGGGCTGGCCGAGC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTATCCGCCGGTGCTTGGTaGGCTCCGAGCTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLSAGAW*APSSFG
Trigger: TCCGAAGGAGCTCGGAGCTCACCAAGCACCGGCGGA...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGCCACGGAGCCGCCCGTaGCCAGCCGAGCTAACAGCC +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMPRSRP*PAELTA
Trigger: GGCTGTTAGCTCGGCTGGGCACGGGCGGCTCCGTGG...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCTGGCCCCACTGTGGATaGGCTGGTGCTCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPWPHCG*AGARPA
Trigger: GGCTGGCCGAGCACCAGCGCATCCACAGTGGGGCCA...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCCGCGGCCACACTGGCTaGATTCGCAGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELRGHTG*IRSAAP
Trigger: GGGCGCGGCGCTGCGAATGCAGCCAGTGTGGCCGCG...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTATCCACTCGGAGCATTaGCAAGGCTCCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSIHSEH*QGSQEL
Trigger: GAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGAT...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGTCTCCAGGGCCCTACTaGGGCCGGGCTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRSPGPY*GRAGAP
Trigger: CGGAGCCCCAGCCCGGCCCCAGTAGGGCCCTGGAGA...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAAACACGCGGCCACACTaGCTGCATTCGCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLNTRPH*LHSQRR
Trigger: GCGGCGCTGCGAATGCAGCCAGTGTGGCCGCGTGTT...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTCCAGGCCGGTGGTCCTaGCACTCTGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTPGRWS*HSAATM
Trigger: CATCGTGGCTGCAGAGTGCCAGGACCACCGGCCTGG...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCAAGCTCAAAGGATGGCTaGGCTGCTTGCTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSSSKDG*AACSQT
Trigger: GGTCTGGGAGCAAGCAGCCCAGCCATCCTTTGAGCT...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCAACAGCACAGCCCTGGTaGGGCTGGCTTCTATCTGTG +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSTAQPW*GWLLSV
Trigger: CACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGT...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTCAGTCAGGTGCGACTTaGCCAGGAAGCAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSQSGAT*PGSSQV
Trigger: CACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTG...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACGTGCTCCAGGAGGCTaGAGCTCTGGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLRAPGG*SSGGRP
Trigger: AGGCCTTCCGCCAGAGCTCCAGCCTCCTGGAGCACG...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370249.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACTGTGGATGCGCTGGTaGTCGGCCAGCCCGTTGACC +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTLWMRW*SASPLT
Trigger: GGTCAACGGGCTGGCCGAGCACCAGCGCATCCACAG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCAGATGGCTGGGCTGCTTaGTCCCAGACCAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSDGWAA*SQTKFG
Trigger: TCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATC...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCATATGGGCAGATTCTGTaGGCTCCCTCTCTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSYGQIL*APSLPV
Trigger: GACGGGAAGAGAGGGAGCCCACAGAATCTGCCCATA...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGCTACTGGGGCCGGGCTaGGGCTCCGCAGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRLLGPG*GSAATW
Trigger: CCACGTAGCTGCGGAGCCCCAGCCCGGCCCCAGTAG...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCTACTGGGGCCGGGCTaGGGCTCCGCAGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDLLGPG*GSAATW
Trigger: CCACGTAGCTGCGGAGCCCCAGCCCGGCCCCAGTAG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATCTGTGGATCCGCCGGTaGCGACTGAGGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNLWIRR*RLRPEL
Trigger: GAGCTCCGGCCTCAGTCGCCACCGGCGGATCCACAG...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCGCCGCGCCCCACTGTaGATCCGCCGGTGGCGACTG +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRARRAPL*IRRWRL
Trigger: CAGTCGCCACCGGCGGATCCACAGTGGGGCGCGGCG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGATGCTTCTGCAGTGCCGAGCGCCTCTTGAACACGCGGCCACACTGGCTGCATGCTGCTGTTCCTCTTaGGGGAGCCCACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: LMLLQCRAPLEHAATLAACCCSS*GSPLEM
Trigger: CATTTCCAGTGGGCTCCCCCAAGAGGAACAGCAGCA...TGCAGCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR CCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTCCCAGCCACAGCTGCTaGGAAGTCACAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTPSHSC*EVTAQP
Trigger: GGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCTGGG...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 72 bp GGGGGTCAGGATGGGTGCCTGAGAAGCCCTTCCAAGTaGTGTCTGCTAGGAAGCTCTGCCTCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GGQDGCLRSPSK*CLLGSSASALV
Trigger: CACCAAGGCTGAGGCAGAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGGCTCGGCCAGCCCGTTaGCCCCTCGGAAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRARPAR*PLGRTC
Trigger: GCAAGTCCTTCCGAGGGGTCAACGGGCTGGCCGAGC...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACGTGCCGAGCGCCTCTTaGACACGCGGCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDVPSAS*TRGHTG
Trigger: GCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCAC...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGGTGCCGAGCGCCTCTTaGACACGCGGCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVVPSAS*TRGHTG
Trigger: GCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCAC...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCGTGTGCATGCGCTGGTaGTTGAGAAGCTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLVCMRW*LRSSWR
Trigger: TCGCCAGGAGCTTCTCAAGCACCAGCGCATGCACAC...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACTGGCCCCACTGTGGATaGGCTGGTGCTCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDWPHCG*AGARPA
Trigger: GGCTGGCCGAGCACCAGCGCATCCACAGTGGGGCCA...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCGGAGCATCTCCAGTGTaGCGCAGTGGTCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLGASPV*RSGQVG
Trigger: TCCAACCTGACCACTGCGGCACACTGGAGATGCTCC...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTCTCGCTAGCCCTTGCTaGTGTTCCTCTTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGALASPC*CSSWGS
Trigger: GCTCCCCCAAGAGGAACAGCAGCAAGGGCTAGCGAG...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTTCTGCTAGGAAGCTCTaGCTCAGCCTTGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTSARKL*LSLGGP
Trigger: GGGCCCACCAAGGCTGAGGCAGAGCTTCCTAGCAGA...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACTGTGGATGCGTGCGTaGTCCAGGAGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTLWMRA*SRRLEL
Trigger: GAGCTCCAGCCTCCTGGAGCACGCACGCATCCACAG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370249.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTGGGACCACTGGCCCTTaGGAAGCTTGTGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGAGTTGP*EACGRH
Trigger: ATGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCC...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGATGCTTCTGCAGTGCCGAGCGCCTCTTGAACACGCGGCCACACTGGCTGCATGCTTGAGAAGCTCCTaGCGATCCAGGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LMLLQCRAPLEHAATLAACLRSS*RSRKSL
Trigger: CAGGGATTTCCTGGATCGCCAGGAGCTTCTCAAGCA...TGCAGCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR CCA 90 bp CTGGGGACTCCGTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGTCTCTTCAGGAAAGCTaGGATCACATTATGAGGACG +
Preference number: 4 (lower is better)
Translates to: LGTPSLSRGTTGRFYSWWSLQES*DHIMRT
Trigger: CGTCCTCATAATGTGATCCCAGCTTTCCTGAAGAGA...CCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGACGGAGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAGCTTCTGTGGGCCACTaGAGGGGCAGGTTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTASVGH*RGRFLA
Trigger: AGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGC...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATGCTCTGCCTCAGCCTTaGTGGGCCCACGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNALPQP*WAHEKG
Trigger: GCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGC...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCGCCTGGGGGTCAGGATaGGTGCCTGAGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPAWGSG*VPEKPF
Trigger: GAAGGGCTTCTCAGGCACCCATCCTGACCCCCAGGC...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGGGCTCCTCTCCAGCCTaGGGGTCAGGATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMGSSPA*GSGWVP
Trigger: AGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCC...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCCAGATCTGGAAGGCCTaGTGGTGTCCGTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLQIWKA*WCPWSI
Trigger: GATGGACCACGGACACCACCAGGCCTTCCAGATCTG...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGCGTGCTCCAGGAGGCTaGAGCTCTGGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWRAPGG*SSGGRP
Trigger: AGGCCTTCCGCCAGAGCTCCAGCCTCCTGGAGCACG...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370249.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTGGGGACTCCGTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGCACAGCAGAAGCCTATaGACCAATCTCTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LGTPSLSRGTTGRFYSWWHSRSL*TNLFLV
Trigger: AACTAGAAAGAGATTGGTTCATAGGCTTCTGCTGTG...CCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGACGGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTCCAGGAAATCCCTGCTaGACGCCTTGCAGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTPGNPC*TPCRRK
Trigger: CTTTCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGG...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGCCCCTCGGAAGGACTTaGCGCAGTCGTCGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWPLGRT*RSRRSR
Trigger: TCGACTGCGACGACTGCGGCAAGTCCTTCCGAGGGG...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTCCTTCGGAAGAGCTTaGCGCAGTGGGGACACCCGT +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKSFGRA*RSGDTR
Trigger: ACGGGTGTCCCCACTGCGGCAAGCTCTTCCGAAGGA...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATGTGTGGATCCGCCGGTaGTTGGTGAGCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNVWIRR*LVSSEL
Trigger: GAGCTCGGAGCTCACCAAGCACCGGCGGATCCACAC...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTGGAGCATCTCCAGTGTaGCGCAGTGGTCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTGASPV*RSGQVG
Trigger: TCCAACCTGACCACTGCGGCACACTGGAGATGCTCC...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAAAGGGCACACTTCCTTaGCAGGCCCTCCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLKGTLP*QALLVS
Trigger: GGACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTT...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACAGGACTGGGACCACTaGCCCTTGGGAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTQDWDH*PLGSLW
Trigger: CCACAAGCTTCCCAAGGGCCAGTGGTCCCAGTCCTG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCCACTGTGGATGCGCTaGTGCTCGGCCAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDPLWMR*CSASPL
Trigger: CAACGGGCTGGCCGAGCACCAGCGCATCCACAGTGG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAAACACGCGGCCACACTaGCTGCATTCGCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPNTRPH*LHSQRR
Trigger: GCGGCGCTGCGAATGCAGCCAGTGTGGCCGCGTGTT...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGAACACGCGGCCACACTaGCTGCATTCGCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRNTRPH*LHSQRR
Trigger: GCGGCGCTGCGAATGCAGCCAGTGTGGCCGCGTGTT...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTATATCTGTGGCTTCTGTaGGCCACTGGAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLYLWLL*ATGGAG
Trigger: ACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATA...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAACAGCACAGCCCTGGTaGGGCTGGCTTCTATCTGTG +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGTAQPW*GWLLSV
Trigger: CACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGT...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGGCTCTGCCTCAGCCTTaGTGGGCCCACGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVALPQP*WAHEKG
Trigger: GCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGC...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAAGTCCCCGTGCTGTCTaGATTCAGGACTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTSPRAV*IQDWDH
Trigger: GTGGTCCCAGTCCTGAATTCAGACAGCACGGGGACT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTAGTCCGCATCTCGGATaGGGAAAGAGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTSPHLG*GKSLLL
Trigger: GAGAAGCAGGCTCTTTCCTCATCCGAGATGCGGACT...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTGCTGCTCAGTCACTaGATCCACTCGGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLLLLSH*IHSEHC
Trigger: GCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAG...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTGATGCTTCTGCAGTGCCGAGCGCCTCTTGAACACGCGGCCACACTGGCTGCACTGTTCTGTCAACCTTaGCGGCAAAGACCAGATCTT +
Preference number: 4 (lower is better)
Translates to: LMLLQCRAPLEHAATLAALFCQP*RQRPDL
Trigger: AAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAG...TGCAGCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTCTGTTCTGTCAACCTTaGCGGCAAAGACCAGATCTT +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSLFCQP*RQRPDL
Trigger: AAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAG...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACAGAGAACACACGTTTaGACAGGTGTTCATGCAGTC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSQRTHV*TGVHAV
Trigger: GACTGCATGAACACCTGTTCAAACGTGTGTTCTCTG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGCACTCGAAGGGCTTTaGCTCCCTCTCCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKALEGL*LPLHLL
Trigger: GAGCAGATGGAGAGGGAGGCAAAGCCCTTCGAGTGC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCTGTGGATGCGCTGGTaGTCGGCCAGCCCGTTGACC +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRALWMRW*SASPLT
Trigger: GGTCAACGGGCTGGCCGAGCACCAGCGCATCCACAG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTCATAGCCCAGGGCAGTaGTGCCAGCTTCTATCAGCA +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTHSPGQ*CQLLSA
Trigger: TGCTGATAGAAGCTGGCAGCACTGCCCTGGGCTATG...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTCATAGCCCAGGGCAGTaGTGCCAGCTTCTATCAGCA +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGAHSPGQ*CQLLSA
Trigger: TGCTGATAGAAGCTGGCAGCACTGCCCTGGGCTATG...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTCTGCTAGGAAGCTCTaGCTCAGCCTTGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMSARKL*LSLGGP
Trigger: GGGCCCACCAAGGCTGAGGCAGAGCTTCCTAGCAGA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTGTTCATGCAGTCAGGTaGGACTTGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTVHAVR*DLARKQ
Trigger: CTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAAC...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGCAGGCAGGCCTGGCGTaGCAGGAAGCGCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMQAGLA*QEAPRS
Trigger: GCTCCGTGGCGCTTCCTGCCACGCCAGGCCTGCCTG...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAGGACGCCATCTCCTGTaGCTGGGCATCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEGRHLL*LGIFPL
Trigger: AAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCC...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGGGGACCACTGGCCCTTaGGAAGCTTGTGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMGTTGP*EACGRH
Trigger: ATGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCC...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCGGCTCCGCAGCTACGTaGCTTTTCCTGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLGSAAT*LFLCSL
Trigger: TAATGAGCACAGGAAAAGCCACGTAGCTGCGGAGCC...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGCAGTCGAAGGGCAGGTaGCCAGTGTGCATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRQSKGR*PVCMRW
Trigger: CCAGCGCATGCACACTGGCCACCTGCCCTTCGACTG...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACAGTCGAAGGGCAGGTaGCCAGTGTGCATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPQSKGR*PVCMRW
Trigger: CCAGCGCATGCACACTGGCCACCTGCCCTTCGACTG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAGTGGGGACACCCGTATaGCTTGGCCCCACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEVGTPV*LGPTVD
Trigger: ATCCACAGTGGGGCCAAGCCATACGGGTGTCCCCAC...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGGTGGGGACACCCGTATaGCTTGGCCCCACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWVGTPV*LGPTVD
Trigger: ATCCACAGTGGGGCCAAGCCATACGGGTGTCCCCAC...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGACTACTCGTGGTGGGTTaGCTGATGCTTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGLLVVG*LMLLQC
Trigger: GCACTGCAGAAGCATCAGCCAACCCACCACGAGTAG...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTTCCAGCCTGCCCACCTaGTGTACTCACCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTSSLPT*CTHLLM
Trigger: CATCAGAAGGTGAGTACACCAGGTGGGCAGGCTGGA...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCAGCAGTCACAGAGTTCTaGCTAATCTATGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSAVTEF*LIYDGS
Trigger: GCTCCCATCATAGATTAGCCAGAACTCTGTGACTGC...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTTGCTGCTGTTCCTCTTaGGGGAGCCCACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGACCCSS*GSPLEM
Trigger: CATTTCCAGTGGGCTCCCCCAAGAGGAACAGCAGCA...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACATGCTGCTGTTCCTCTTaGGGGAGCCCACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTCCCSS*GSPLEM
Trigger: CATTTCCAGTGGGCTCCCCCAAGAGGAACAGCAGCA...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACATATCTGTGGCTTCTGTaGGCCACTGGAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTYLWLL*ATGGAG
Trigger: ACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATA...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGACAGCACAGCCCTGGTaGGGCTGGCTTCTATCTGTG +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKTAQPW*GWLLSV
Trigger: CACAGATAGAAGCCAGCCCCACCAGGGCTGTGCTGT...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTGGCTCCTCTCCAGCCTaGGGGTCAGGATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRAGSSPA*GSGWVP
Trigger: AGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCC...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTGGAAATGCAAGAGTaGGGTGACACAGCTAATGGA +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSLEMQE*GDTANG
Trigger: TCCATTAGCTGTGTCACCCCACTCTTGCATTTCCAG...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAGCCTGGTGGTGTCCGTaGTCCATCATGTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGAWWCP*SIMFCQ
Trigger: CTGACAGAACATGATGGACCACGGACACCACCAGGC...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCCAGATCTGGAAGGCCTaGTGGTGTCCGTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPQIWKA*WCPWSI
Trigger: GATGGACCACGGACACCACCAGGCCTTCCAGATCTG...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 72 bp GAATCTGCTGCTCAGTCACTGAATCCACTCGGAGCATaGCCAAGGCTCCCAGGAGCTCAAAGGATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ESAAQSLNPLGA*PRLPGAQRMAG
Trigger: CCCAGCCATCCTTTGAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGAGTCCCCGTGCTGTCTaGATTCAGGACTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMSPRAV*IQDWDH
Trigger: GTGGTCCCAGTCCTGAATTCAGACAGCACGGGGACT...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACAACTGTTCATCTCCTTTaGCTCTGCCATCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTTVHLL*LCHPLW
Trigger: CCAGAGGGGATGGCAGAGTCAAAGGAGATGAACAGT...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTGGAGTCAGAGTAAAATaGTTTCGTGAAAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSGVRVK*FREREG
Trigger: ACCCTCCCTTTCACGAAATCATTTTACTCTGACTCC...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCCTGCTGCTCAGTCACTaGATCCACTCGGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPLLLSH*IHSEHC
Trigger: GCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAG...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGTCAGGATGGGTGCCTaGGAAGCCCTTCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKVRMGA*EALPSC
Trigger: ACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGAC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGGCACTCGAAGGGCTTTaGCTCCCTCTCCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMALEGL*LPLHLL
Trigger: GAGCAGATGGAGAGGGAGGCAAAGCCCTTCGAGTGC...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAGATCCAGGAAATCCCTaGTGCACGCCTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEDPGNP*CTPCRR
Trigger: TCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGGATC...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATGATCCAGGAAATCCCTaGTGCACGCCTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNDPGNP*CTPCRR
Trigger: TCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGGATC...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGTGGCCCCACTGTGGATaGGCTGGTGCTCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMWPHCG*AGARPA
Trigger: GGCTGGCCGAGCACCAGCGCATCCACAGTGGGGCCA...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTTCCTTCGGAAGAGCTTaGCGCAGTGGGGACACCCGT +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGSFGRA*RSGDTR
Trigger: ACGGGTGTCCCCACTGCGGCAAGCTCTTCCGAAGGA...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAATCCGGCGGAAGGCCTTaGCGCATTTGTCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEESGGRP*RICRTH
Trigger: ATGAGTGCGACAAATGCGGCAAGGCCTTCCGCCGGA...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCGCGGCCACACTGGCTaGATTCGCAGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCRGHTG*IRSAAP
Trigger: GGGCGCGGCGCTGCGAATGCAGCCAGTGTGGCCGCG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATATCCACTCGGAGCATTaGCAAGGCTCCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNIHSEH*QGSQEL
Trigger: GAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGAT...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTTGCCCTCCAAACCTTTaGTTTAGTGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGACPPNL*FSAPPG
Trigger: CCCAGGAGGAGCACTAAAGCAAAGGTTTGGAGGGCA...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGCTCGCTAGCCCTTGCTaGTGTTCCTCTTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRLASPC*CSSWGS
Trigger: GCTCCCCCAAGAGGAACAGCAGCAAGGGCTAGCGAG...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAAAGGGCACACTTCCTTaGCAGGCCCTCCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEKGTLP*QALLVS
Trigger: GGACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTT...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTGGGGACTCCGTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGATCAAGCACATGGAATaGAACACCACTCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: LGTPSLSRGTTGRFYSWWIKHME*NTTQKH
Trigger: ATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGAT...CCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGACGGAGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR GCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTACCAATGAGGGCTGCTaGCAGAAATCCAAGAACATA +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSTNEGC*QKSKNI
Trigger: TATGTTCTTGGATTTCTGGCAGCAGCCCTCATTGGT...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGTTCATGCAGTCAGGTaGGACTTGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKVHAVR*DLARKQ
Trigger: CTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAAC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGTCCAAGGGATCAGCCTaGCAGGTAAGGCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWSKGSA*QVRPHP
Trigger: TGGATGGGGCCTTACCTGCCAGGCTGATCCCTTGGA...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCTCTTCCCCCTTCATCTaGTGTCGGGTCGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELSSPFI*CRVAEV
Trigger: CACCTCCGCGACCCGACACCAGATGAAGGGGGAAGA...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATTCTCCAGGGCCCTACTaGGGCCGGGCTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDSPGPY*GRAGAP
Trigger: CGGAGCCCCAGCCCGGCCCCAGTAGGGCCCTGGAGA...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATCCACTGTGGATGCGCTaGTGCTCGGCCAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNPLWMR*CSASPL
Trigger: CAACGGGCTGGCCGAGCACCAGCGCATCCACAGTGG...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATGGTTTCAGTCCGCTGTaGATGCGCCGGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNGFSPL*MRRCLM
Trigger: CATCAAGCACCGGCGCATCCACAGCGGACTGAAACC...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGGGTTTCAGTCCGCTGTaGATGCGCCGGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWGFSPL*MRRCLM
Trigger: CATCAAGCACCGGCGCATCCACAGCGGACTGAAACC...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACATCCAGCCTGCCCACCTaGTGTACTCACCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTSSLPT*CTHLLM
Trigger: CATCAGAAGGTGAGTACACCAGGTGGGCAGGCTGGA...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATAGCTCAAAGGATGGCTaGGCTGCTTGCTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNSSKDG*AACSQT
Trigger: GGTCTGGGAGCAAGCAGCCCAGCCATCCTTTGAGCT...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGCTTCTGTGGGCCACTaGAGGGGCAGGTTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGASVGH*RGRFLA
Trigger: AGCGAGGAACCTGCCCCTCCAGTGGCCCACAGAAGC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAACAGCCCTGGTGGGGCTaGCTTCTATCTGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEQPWWG*LLSVAS
Trigger: AGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTG...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCCCAGCCACAGCTGCTaGGAAGTCACAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRAPSHSC*EVTAQP
Trigger: GGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCTGGG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTACTGCCTCAGCCTTGGTaGGCCCACGAGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLLPQPW*AHEKGT
Trigger: TGTGCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAG...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTATCACAATTTAATGGGTaGGGGAGGGCTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLSQFNG*GRAEEE
Trigger: CTCCTCCTCAGCCCTCCCCCACCCATTAAATTGTGA...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACGCATAAGAGAAAGATaGGACTGGTGGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTRIRER*DWWSGG
Trigger: GCCTCCTGACCACCAGTCTCATCTTTCTCTTATGCG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGGGTGTACTCACCTTCTaGTGGGCTGGGGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPGVLTF*WAGVAA
Trigger: AGCTGCAACCCCAGCCCATCAGAAGGTGAGTACACC...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTTGTGGCTATAGGAAGTaGTGCCAGAACACATGGGTG +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGACGYRK*CQNTWV
Trigger: CACCCATGTGTTCTGGCATCACTTCCTATAGCCACA...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGATCACCGCAAACACCATaGACAGCTGTTCTGTCAACC +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGSPQTP*TAVLST
Trigger: GGTTGACAGAACAGCTGTTCATGGTGTTTGCGGTGA...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTGTGACATTTTGCATCTaGCATAGCAGTACACCTAGA +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSVTFCI*HSSTPR
Trigger: TCTAGGTGTACTGCTATGTCAGATGCAAAATGTCAC...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTCTGTGGACTCTCTGGTaGTGGACAAGCAGGACTTTA +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTLWTLW*WTSRTL
Trigger: TAAAGTCCTGCTTGTCCAGCACCAGAGAGTCCACAG...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAACGTGGCTTTTCCTGTaGTCATTAAACTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGTWLFL*SLNSAT
Trigger: GGTGGCGGAGTTTAATGAGCACAGGAAAAGCCACGT...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTGTGTGCATGCGCTGGTaGTTGAGAAGCTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGVCMRW*LRSSWR
Trigger: TCGCCAGGAGCTTCTCAAGCACCAGCGCATGCACAC...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATGTGTGGATCCGCCGGTaGTTGGTGAGCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNVWIRR*LVSSEL
Trigger: GAGCTCGGAGCTCACCAAGCACCGGCGGATCCACAC...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCATCCGGCGGAAGGCCTTaGCGCATTTGTCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPSGGRP*RICRTH
Trigger: ATGAGTGCGACAAATGCGGCAAGGCCTTCCGCCGGA...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTTGGATAGTCAAGTGGTaGCCACAGATAGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTWIVKW*PQIDRE
Trigger: CTCCCTGTCTATCTGTGGGCACCACTTGACTATCCA...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGAAGGGCACACTTCCTTaGCAGGCCCTCCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPKGTLP*QALLVS
Trigger: GGACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTT...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTGACGGCAGGAAGGGATaGCAAGACACCACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRADGRKG*QDTTSQ
Trigger: CTGGGACGTGGTGTCTTGGCATCCCTTCCTGCCGTC...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACACTGATGATTGCTTGCTaGCCTTGGGTCAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTLMIAC*PWVRCS
Trigger: TGAACACCTGACCCAAGGGCAGCAAGCAATCATCAG...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTCTGATGATTGCTTGCTaGCCTTGGGTCAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTLMIAC*PWVRCS
Trigger: TGAACACCTGACCCAAGGGCAGCAAGCAATCATCAG...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTATTGAACAGGTGTTCATaGAGTCAGGTGCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLLNRCS*SQVRLG
Trigger: GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAA...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTATCTTCCCCCTTCATCTaGTGTCGGGTCGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLSSPFI*CRVAEV
Trigger: CACCTCCGCGACCCGACACCAGATGAAGGGGGAAGA...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGGGACCACTGGCCCTTaGGAAGCTTGTGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGGTTGP*EACGRH
Trigger: ATGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGGCTCCGCAGCTACGTaGCTTTTCCTGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKGSAAT*LFLCSL
Trigger: TAATGAGCACAGGAAAAGCCACGTAGCTGCGGAGCC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCTGCTTGAGAAGCTCCTaGCGATCCAGGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPCLRSS*RSRKSL
Trigger: CAGGGATTTCCTGGATCGCCAGGAGCTTCTCAAGCA...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGCCAGTGTGCATGCGCTaGTGCTTGAGAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRPVCMR*CLRSSW
Trigger: CCAGGAGCTTCTCAAGCACCAGCGCATGCACACTGG...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGGTTTCAGTCCGCTGTaGATGCGCCGGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPGFSPL*MRRCLM
Trigger: CATCAAGCACCGGCGCATCCACAGCGGACTGAAACC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACGCCGCGCCCCACTGTaGATCCGCCGGTGGCGACTG +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKRRAPL*IRRWRL
Trigger: CAGTCGCCACCGGCGGATCCACAGTGGGGCGCGGCG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGCTACTCGTGGTGGGTTaGCTGATGCTTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWLLVVG*LMLLQC
Trigger: GCACTGCAGAAGCATCAGCCAACCCACCACGAGTAG...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAATGAGGACGCCATCGTaGAACAGCTCTGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLMRTPS*NSSVCF
Trigger: GAAACACACAGAGCTGTTCCACGATGGCGTCCTCAT...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGCCGCAGTGGTCAGGTTaGATAGTCAAGTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWPQWSG*IVKWCP
Trigger: TGGGCACCACTTGACTATCCAACCTGACCACTGCGG...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGCCGCAGTGGTCAGGTTaGATAGTCAAGTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMPQWSG*IVKWCP
Trigger: TGGGCACCACTTGACTATCCAACCTGACCACTGCGG...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCAGGAGCTCAAAGGATaGCTGGGCTGCTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDQELKG*LGCLLP
Trigger: TGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGCAGGAGCTCAAAGGATaGCTGGGCTGCTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRQELKG*LGCLLP
Trigger: TGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTG...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATCTGCCTCAGCCTTGGTaGGCCCACGAGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNLPQPW*AHEKGT
Trigger: TGTGCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAG...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACGGCTCCTCTCCAGCCTaGGGGTCAGGATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHGSSPA*GSGWVP
Trigger: AGGCACCCATCCTGACCCCCAGGCTGGAGAGGAGCC...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCCTGGAAATGCAAGAGTaGGGTGACACAGCTAATGGA +
Preference number: 4 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLLEMQE*GDTANG
Trigger: TCCATTAGCTGTGTCACCCCACTCTTGCATTTCCAG...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGCAGATCTGGAAGGCCTaGTGGTGTCCGTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPQIWKA*WCPWSI
Trigger: GATGGACCACGGACACCACCAGGCCTTCCAGATCTG...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCCAGTCAGGTGCGACTTaGCCAGGAAGCAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELQSGAT*PGSSQV
Trigger: CACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTG...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACAGTCAGGTGCGACTTaGCCAGGAAGCAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPQSGAT*PGSSQV
Trigger: CACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCATGTCCTTGTGCCAGGTaGGGGACCAAGGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPCPCAR*GTKAGF
Trigger: AAATCCTGCCTTGGTCCCTCACCTGGCACAAGGACA...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTTGGACCCTCAGATGCTaGCTCAGGCCTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGWTLRC*LRPAFF
Trigger: GAAGAATGCAGGCCTGAGTCAGCATCTGAGGGTCCA...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGCTCGGCCAGCCCGTTaGCCCCTCGGAAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDARPAR*PLGRTC
Trigger: GCAAGTCCTTCCGAGGGGTCAACGGGCTGGCCGAGC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTTCCGCCGGTGCTTGGTaGGCTCCGAGCTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLSAGAW*APSSFG
Trigger: TCCGAAGGAGCTCGGAGCTCACCAAGCACCGGCGGA...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGACTGTTCATCTCCTTTaGCTCTGCCATCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMTVHLL*LCHPLW
Trigger: CCAGAGGGGATGGCAGAGTCAAAGGAGATGAACAGT...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTAGGTGTACTCACCTTCTaGTGGGCTGGGGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLGVLTF*WAGVAA
Trigger: AGCTGCAACCCCAGCCCATCAGAAGGTGAGTACACC...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGAGTCCGCATCTCGGATaGGGAAAGAGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVSPHLG*GKSLLL
Trigger: GAGAAGCAGGCTCTTTCCTCATCCGAGATGCGGACT...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGTCAGGATGGGTGCCTaGGAAGCCCTTCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPVRMGA*EALPSC
Trigger: ACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGAC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGCCCAGCTGGGAGCAGTaGCGACTTTATGCTACGTTC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVPSWEQ*RLYATF
Trigger: GAACGTAGCATAAAGTCGTCACTGCTCCCAGCTGGG...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACCCAGCTGGGAGCAGTaGCGACTTTATGCTACGTTC +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPPSWEQ*RLYATF
Trigger: GAACGTAGCATAAAGTCGTCACTGCTCCCAGCTGGG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGGCTCCCCACACCTTCTaGTGCCTAGAAGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWAPHTF*CLEASV
Trigger: AACAGAAGCTTCTAGGCATCAGAAGGTGTGGGGAGC...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGGTAGGGGATCAGACATaGAAGGCCACCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRVGDQT*KATPVF
Trigger: GAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTAC...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAACGTGGCTTTTCCTGTaGTCATTAAACTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTTWLFL*SLNSAT
Trigger: GGTGGCGGAGTTTAATGAGCACAGGAAAAGCCACGT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTAGATCCAGGAAATCCCTaGTGCACGCCTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLDPGNP*CTPCRR
Trigger: TCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGGATC...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACCCCCTCGGAAGGACTTaGCGCAGTCGTCGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHPLGRT*RSRRSR
Trigger: TCGACTGCGACGACTGCGGCAAGTCCTTCCGAGGGG...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGCTGATGCTTCTGCAGTaGCGAGCGCCTCTTGAACAC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVLMLLQ*RAPLEH
Trigger: GTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCGAATTTTCCCCTAGCTaGCCACAGCAGAAGCCTATG +
Preference number: 4 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPEFSPS*PQQKPM
Trigger: CATAGGCTTCTGCTGTGGGCAGCTAGGGGAAAATTC...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCCATAGCCCAGGGCAGTaGTGCCAGCTTCTATCAGCA +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELHSPGQ*CQLLSA
Trigger: TGCTGATAGAAGCTGGCAGCACTGCCCTGGGCTATG...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATTGCCCTCCAAACCTTTaGTTTAGTGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNCPPNL*FSAPPG
Trigger: CCCAGGAGGAGCACTAAAGCAAAGGTTTGGAGGGCA...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTGGACTATTCTGGAAATaGAAGAGTGGGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGAGLFWK*KSGVTQ
Trigger: CTGTGTCACCCCACTCTTGCATTTCCAGAATAGTCC...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATGCTCTGATGATTGCTTaGTGCCCTTGGGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNALMIA*CPWVRC
Trigger: ACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGC...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAACAGGCAGGCCTGGCGTaGCAGGAAGCGCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKQAGLA*QEAPRS
Trigger: GCTCCGTGGCGCTTCCTGCCACGCCAGGCCTGCCTG...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCTCCAAGGGATCAGCCTaGCAGGTAAGGCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGSKGSA*QVRPHP
Trigger: TGGATGGGGCCTTACCTGCCAGGCTGATCCCTTGGA...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTACCCTTGGGAAGCTTGTaGACGCCATCTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLPLGSL*TPSPVA
Trigger: AGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGG...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATCTGTGGATCCGCCGGTaGCGACTGAGGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNLWIRR*RLRPEL
Trigger: GAGCTCCGGCCTCAGTCGCCACCGGCGGATCCACAG...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATCTGTGGATCCGCCGGTaGCGACTGAGGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDLWIRR*RLRPEL
Trigger: GAGCTCCGGCCTCAGTCGCCACCGGCGGATCCACAG...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTCTCTGCCATCCCCTCTaGGGACTCCGTCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLLCHPL*GLRPCP
Trigger: GGGACAGGGACGGAGTCCCCAGAGGGGATGGCAGAG...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTCCAGGCCGGTGGTCCTaGCACTCTGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLPGRWS*HSAATM
Trigger: CATCGTGGCTGCAGAGTGCCAGGACCACCGGCCTGG...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACACACCTTCTGATGGGCTaGGGTTGCAGCTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTHLLMG*GCSFLF
Trigger: AAACAAAAAGCTGCAACCCCAGCCCATCAGAAGGTG...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGCCGCAGTGGTCAGGTTaGATAGTCAAGTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVPQWSG*IVKWCP
Trigger: TGGGCACCACTTGACTATCCAACCTGACCACTGCGG...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATTCCAGTGTGCCGCAGTaGTCAGGTTGGATAGTCAAG +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNSSVPQ*SGWIVK
Trigger: CTTGACTATCCAACCTGACCACTGCGGCACACTGGA...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGAERRM*SRQVFL
Trigger: CAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGC...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCTATCTGTGGCTTCTGTaGGCCACTGGAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGYLWLL*ATGGAG
Trigger: ACCTGCCCCTCCAGTGGCCCACAGAAGCCACAGATA...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTGCTGGCTTCTATCTGTaGCTTCTGTGGGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGAGFYL*LLWATG
Trigger: TCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGC...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGCCCAGCCACAGCTGCTaGGAAGTCACAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGPSHSC*EVTAQP
Trigger: GGGCTGTGCTGTGACTTCCCAGCAGCTGTGGCTGGG...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGCTGCCTCAGCCTTGGTaGGCCCACGAGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGLPQPW*AHEKGT
Trigger: TGTGCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAG...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAATTGCTTGCTGCCCTTaGGTCAGGTGTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTIACCP*VRCSVL
Trigger: CAGAACTGAACACCTGACCCAAGGGCAGCAAGCAAT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGTCCAAGAACATACCATaGCCAGGCCTTCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVSKNIP*PGLPPS
Trigger: GCTGGGAGGAAGGCCTGGCCATGGTATGTTCTTGGA...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAGAGACCCACTCAAGCTaGCTCAAGTCAAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEETHSS*LKSRSL
Trigger: CAGACTCCTTGACTTGAGCCAGCTTGAGTGGGTCTC...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTAAATACAAACTGGGGTaGGACATAGCTATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSKYKLG*DIAIVL
Trigger: GAGAACAATAGCTATGTCCCACCCCAGTTTGTATTT...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATAGAGACACACACGGATaGCTCATCATGCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNRDTHG*LIMPQN
Trigger: GTTCTGAGGCATGATGAGTCATCCGTGTGTGTCTCT...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGTGCCGAGCGCCTCTTaGACACGCGGCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSVPSAS*TRGHTG
Trigger: GCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCAC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGCGCATAAGAGAAAGATaGGACTGGTGGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVRIRER*DWWSGG
Trigger: GCCTCCTGACCACCAGTCTCATCTTTCTCTTATGCG...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAATGTGGCTATAGGAAGTaGTGCCAGAACACATGGGTG +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEECGYRK*CQNTWV
Trigger: CACCCATGTGTTCTGGCATCACTTCCTATAGCCACA...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTAACTACTGCAAGAACTaGGGCCCACAGGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGNYCKN*GPQGKR
Trigger: CCTTTTGCCCTGTGGGCCTCAGTTCTTGCAGTAGTT...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACAACTACTGCAAGAACTaGGGCCCACAGGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDNYCKN*GPQGKR
Trigger: CCTTTTGCCCTGTGGGCCTCAGTTCTTGCAGTAGTT...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACAGAACAGGGTGCACTGTaGTTTCACTCATTTTATGGC +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTEQGAL*FHSFYG
Trigger: GCCATAAAATGAGTGAAATCACAGTGCACCCTGTTC...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAGAACAGGGTGCACTGTaGTTTCACTCATTTTATGGC +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGEQGAL*FHSFYG
Trigger: GCCATAAAATGAGTGAAATCACAGTGCACCCTGTTC...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTTCCAAAGTGATGCAATaGGAACTACAGAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: SALVGPREGHTSLPGPPSSKVMQ*ELQNVS
Trigger: ACTTACATTCTGTAGTTCTCATTGCATCACTTTGGA...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCATCCAAAGTGATGCAATaGGAACTACAGAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: TSHRRGRVPLRASALLPSSKVMQ*ELQNVS
Trigger: ACTTACATTCTGTAGTTCTCATTGCATCACTTTGGA...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATACGTGGCTTTTCCTGTaGTCATTAAACTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNTWLFL*SLNSAT
Trigger: GGTGGCGGAGTTTAATGAGCACAGGAAAAGCCACGT...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATCTGTGGATGCGCTGGTaGTCGGCCAGCCCGTTGACC +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNLWMRW*SASPLT
Trigger: GGTCAACGGGCTGGCCGAGCACCAGCGCATCCACAG...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGGATGAGGAAAGAGCCTaGTTCTCTGGCCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWDEERA*FSGPFP
Trigger: TGGAAATGGGCCAGAGAAGCAGGCTCTTTCCTCATC...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTAGATGGCTGGGCTGCTTaGTCCCAGACCAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLDGWAA*SQTKFG
Trigger: TCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATC...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGAAAGGATGGCTGGGCTaGTTGCTCCCAGACCAAGTT +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVKGWLG*LLPDQV
Trigger: AACTTGGTCTGGGAGCAAGCAGCCCAGCCATCCTTT...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGGAATTTTCCCCTAGCTaGCCACAGCAGAAGCCTATG +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWEFSPS*PQQKPM
Trigger: CATAGGCTTCTGCTGTGGGCAGCTAGGGGAAAATTC...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGTGCCCTCCAAACCTTTaGTTTAGTGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRCPPNL*FSAPPG
Trigger: CCCAGGAGGAGCACTAAAGCAAAGGTTTGGAGGGCA...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTTCACTATGTAACAAGTaGTTTTGGCTCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGASLCNK*FWLLSS
Trigger: GCTGGAGAGGAGCCAAAAGCACTTGTTACATAGTGA...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACGACGGCAGGAAGGGATaGCAAGACACCACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHDGRKG*QDTTSQ
Trigger: CTGGGACGTGGTGTCTTGGCATCCCTTCCTGCCGTC...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACAAAAACATGCCCGCTaGAATTGGGTAGGGACTATT +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLQKHAR*NWVGTI
Trigger: AATAGTCCCTACCCAATTGCAGCGGGCATGTTTTTG...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATCACCACTCAAAAACATaGCCGCTGCAATTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNHHSKT*PLQLGR
Trigger: CCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTG...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATTTGAACAGGTGTTCATaGAGTCAGGTGCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNLNRCS*SQVRLG
Trigger: GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAA...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGGGACGCCATCTCCTGTaGCTGGGCATCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMGRHLL*LGIFPL
Trigger: AAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCC...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTATATGGGCAGATTCTGTaGGCTCCCTCTCTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLYGQIL*APSLPV
Trigger: GACGGGAAGAGAGGGAGCCCACAGAATCTGCCCATA...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGTGCTTGAGAAGCTCCTaGCGATCCAGGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPCLRSS*RSRKSL
Trigger: CAGGGATTTCCTGGATCGCCAGGAGCTTCTCAAGCA...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGGGTTGGATAGTCAAGTaGTGCCCACAGATAGACAGG +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWGWIVK*CPQIDR
Trigger: CCTGTCTATCTGTGGGCACCACTTGACTATCCAACC...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACTGCTCCTCCTGGGCATaGCTGTTGCAAATCATAGCC +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDCSSWA*LLQIIA
Trigger: GGCTATGATTTGCAACAGCCATGCCCAGGAGGAGCA...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGTGCTCCTCCTGGGCATaGCTGTTGCAAATCATAGCC +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRCSSWA*LLQIIA
Trigger: GGCTATGATTTGCAACAGCCATGCCCAGGAGGAGCA...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAGCTCTGCCTCAGCCTTaGTGGGCCCACGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLALPQP*WAHEKG
Trigger: GCCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGC...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCCTGGAAATGCAAGAGTaGGGTGACACAGCTAATGGA +
Preference number: 4 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPLEMQE*GDTANG
Trigger: TCCATTAGCTGTGTCACCCCACTCTTGCATTTCCAG...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTTTGCATTTCAGATCTaGAAGGCCTGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMFAFQI*KAWWCP
Trigger: CGGACACCACCAGGCCTTCCAGATCTGAAATGCAAA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTTCCAAGAACATACCATaGCCAGGCCTTCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRASKNIP*PGLPPS
Trigger: GCTGGGAGGAAGGCCTGGCCATGGTATGTTCTTGGA...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGGAGACCCACTCAAGCTaGCTCAAGTCAAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPETHSS*LKSRSL
Trigger: CAGACTCCTTGACTTGAGCCAGCTTGAGTGGGTCTC...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTATTTCACTCATTTTATaGCCCGCATGTGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGAISLIL*PACGGF
Trigger: GAACCCACCACATGCGGGCCATAAAATGAGTGAAAT...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATTGTCCTTGTGCCAGGTaGGGGACCAAGGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNCPCAR*GTKAGF
Trigger: AAATCCTGCCTTGGTCCCTCACCTGGCACAAGGACA...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTTCAAGGCATGTGGACTaGAATACCTTGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGASRHVD*NTLMVL
Trigger: AAGTACCATCAAGGTATTTCAGTCCACATGCCTTGA...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGACTAGTCAAAGGAGATaGACGGACCATTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKTSQRR*TDHLHA
Trigger: TGCATGCAAATGGTCCGTTCATCTCCTTTGACTAGT...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAACCAACAAACGATAAATaGACGGGCAAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEPTNDK*TGKTWQ
Trigger: CTGCCATGTCTTGCCCGTTCATTTATCGTTTGTTGG...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACACAATGGGATCCCTCATaGAACCCAACAAACGATAAA +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTQWDPS*NPTNDK
Trigger: TTTATCGTTTGTTGGGTTTCATGAGGGATCCCATTG...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCATCACCGCAAACACCATaGACAGCTGTTCTGTCAACC +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPSPQTP*TAVLST
Trigger: GGTTGACAGAACAGCTGTTCATGGTGTTTGCGGTGA...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAGAAAGAAAACCGGAATaGGGTAGATGCATGAATGCA +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLERKPE*GRCMNA
Trigger: TGCATTCATGCATCTACCTCATTCCGGTTTTCTTTC...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTCATAGTAACAAGGTTTaGAGGAGGAACATCTCATGC +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGAHSNKV*RRNISC
Trigger: GCATGAGATGTTCCTCCTTCAAACCTTGTTACTATG...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATCAGAGAACACACGTTTaGACAGGTGTTCATGCAGTC +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNQRTHV*TGVHAV
Trigger: GACTGCATGAACACCTGTTCAAACGTGTGTTCTCTG...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTATGCTGACTCAGGCCTaGATTCTTCTTAAACCGTTT +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGAMLTQA*ILLKPF
Trigger: AAACGGTTTAAGAAGAATGCAGGCCTGAGTCAGCAT...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGCCCTGCTGCACGCCTTaGAGGCGAAAGGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEPCCTP*RRKAFP
Trigger: CGGAAAAGCCTTTCGCCTGCAAGGCGTGCAGCAGGG...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTACCCCTCGGAAGGACTTaGCGCAGTCGTCGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLPLGRT*RSRRSR
Trigger: TCGACTGCGACGACTGCGGCAAGTCCTTCCGAGGGG...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACACTGATGGGCTGGGGTTaGAGCTTTTTGTTTGTAATT +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTLMGWG*SFLFVI
Trigger: AATTACAAACAAAAAGCTGCAACCCCAGCCCATCAG...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGGATGAGGAAAGAGCCTaGTTCTCTGGCCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRDEERA*FSGPFP
Trigger: TGGAAATGGGCCAGAGAAGCAGGCTCTTTCCTCATC...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACGATGAGGAAAGAGCCTaGTTCTCTGGCCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDDEERA*FSGPFP
Trigger: TGGAAATGGGCCAGAGAAGCAGGCTCTTTCCTCATC...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGATCCACTCGGAGCATTaGCAAGGCTCCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVIHSEH*QGSQEL
Trigger: GAGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGAT...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGTCAGAAGGGTTCCACTaGCCTCCAAACCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWSEGFH*PPNLCF
Trigger: AAAGCAAAGGTTTGGAGGGCAGTGGAACCCTTCTGA...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTCACCACTCAAAAACATaGCCGCTGCAATTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGHHSKT*PLQLGR
Trigger: CCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTG...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGTTGAACAGGTGTTCATaGAGTCAGGTGCGACTTGGC +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRLNRCS*SQVRLG
Trigger: GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAA...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGCCCTTGGGAAGCTTGTaGACGCCATCTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMPLGSL*TPSPVA
Trigger: AGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGG...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTCAGGACTGGGACCACTaGCCCTTGGGAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLQDWDH*PLGSLW
Trigger: CCACAAGCTTCCCAAGGGCCAGTGGTCCCAGTCCTG...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGTGGACTCTCTGGTGCTaGACAAGCAGGACTTTAAGC +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPWTLWC*TSRTLS
Trigger: GCTTAAAGTCCTGCTTGTCCAGCACCAGAGAGTCCA...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCATGGACTCTCTGGTGCTaGACAAGCAGGACTTTAAGC +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPWTLWC*TSRTLS
Trigger: GCTTAAAGTCCTGCTTGTCCAGCACCAGAGAGTCCA...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATCAGTCGAAGGGCAGGTaGCCAGTGTGCATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNQSKGR*PVCMRW
Trigger: CCAGCGCATGCACACTGGCCACCTGCCCTTCGACTG...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTCCACTGTGGATGCGCTaGTGCTCGGCCAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSPLWMR*CSASPL
Trigger: CAACGGGCTGGCCGAGCACCAGCGCATCCACAGTGG...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTCTCTGCCATCCCCTCTaGGGACTCCGTCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSLCHPL*GLRPCP
Trigger: GGGACAGGGACGGAGTCCCCAGAGGGGATGGCAGAG...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACATGAGGACGCCATCGTaGAACAGCTCTGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDMRTPS*NSSVCF
Trigger: GAAACACACAGAGCTGTTCCACGATGGCGTCCTCAT...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGGACAATGACAGCAGATaGCCTTCACTGAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMDNDSR*PSLSVY
Trigger: GTACACACTCAGTGAAGGCCATCTGCTGTCATTGTC...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAACACCTTCTGATGGGCTaGGGTTGCAGCTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEHLLMG*GCSFLF
Trigger: AAACAAAAAGCTGCAACCCCAGCCCATCAGAAGGTG...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTTCCAGTGTGCCGCAGTaGTCAGGTTGGATAGTCAAG +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRASSVPQ*SGWIVK
Trigger: CTTGACTATCCAACCTGACCACTGCGGCACACTGGA...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACAAGGAGATGTTTCTTaGGTGAATCTGCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTQGDVS*VNLLLS
Trigger: ACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEEAERRM*SRQVFL
Trigger: CAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGC...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTATGCTCCTCCTGGGCATaGCTGTTGCAAATCATAGCC +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLCSSWA*LLQIIA
Trigger: GGCTATGATTTGCAACAGCCATGCCCAGGAGGAGCA...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCATGCCCGCTGCAATTaGGTAGGGACTATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDHARCN*VGTILE
Trigger: TTCCAGAATAGTCCCTACCCAATTGCAGCGGGCATG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTATTGCTTGCTGCCCTTaGGTCAGGTGTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGIACCP*VRCSVL
Trigger: CAGAACTGAACACCTGACCCAAGGGCAGCAAGCAAT...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACTGTCCTTGTGCCAGGTaGGGGACCAAGGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHCPCAR*GTKAGF
Trigger: AAATCCTGCCTTGGTCCCTCACCTGGCACAAGGACA...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACGTTTGGCCTCACAATaGCATTTTGGGTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTRLASQ*HFGCFK
Trigger: TTTAAAGCACCCAAAATGTCATTGTGAGGCCAAACG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGCTGCTGCTCAGTCACTaGATCCACTCGGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGLLLSH*IHSEHC
Trigger: GCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAG...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGGTCAGGATGGGTGCCTaGGAAGCCCTTCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGVRMGA*EALPSC
Trigger: ACAACTTGGAAGGGCTTCTCAGGCACCCATCCTGAC...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGCCAACAAACGATAAATaGACGGGCAAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPPTNDK*TGKTWQ
Trigger: CTGCCATGTCTTGCCCGTTCATTTATCGTTTGTTGG...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGCCCAGCTGGGAGCAGTaGCGACTTTATGCTACGTTC +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVPSWEQ*RLYATF
Trigger: GAACGTAGCATAAAGTCGTCACTGCTCCCAGCTGGG...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCCTGTTCTGTCAACCTTaGCGGCAAAGACCAGATCTT +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELLFCQP*RQRPDL
Trigger: AAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAG...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACAAATGAGGTAGATGCATaGATGCACAGACAAGGATAT +
Preference number: 4 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTNEVDA*MHRQGY
Trigger: ATATCCTTGTCTGTGCATTCATGCATCTACCTCATT...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGCAGAGAACACACGTTTaGACAGGTGTTCATGCAGTC +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPQRTHV*TGVHAV
Trigger: GACTGCATGAACACCTGTTCAAACGTGTGTTCTCTG...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCCAGAATGTAAGTACATaGGTAAGAGAGAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLQNVST*VREKLA
Trigger: TGCTAACTTCTCTCTTACTCATGTACTTACATTCTG...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCTGTGGACTCTCTGGTaGTGGACAAGCAGGACTTTA +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRALWTLW*WTSRTL
Trigger: TAAAGTCCTGCTTGTCCAGCACCAGAGAGTCCACAG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGGTGTGCATGCGCTGGTaGTTGAGAAGCTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEVCMRW*LRSSWR
Trigger: TCGCCAGGAGCTTCTCAAGCACCAGCGCATGCACAC...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACCTGATGCTTCTGCAGTaGCGAGCGCCTCTTGAACAC +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHLMLLQ*RAPLEH
Trigger: GTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGTCAGAAGGGTTCCACTaGCCTCCAAACCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRSEGFH*PPNLCF
Trigger: AAAGCAAAGGTTTGGAGGGCAGTGGAACCCTTCTGA...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATGACGGCAGGAAGGGATaGCAAGACACCACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNDGRKG*QDTTSQ
Trigger: CTGGGACGTGGTGTCTTGGCATCCCTTCCTGCCGTC...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGGACTATTCTGGAAATaGAAGAGTGGGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPGLFWK*KSGVTQ
Trigger: CTGTGTCACCCCACTCTTGCATTTCCAGAATAGTCC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATACCAATGAGGGCTGCTaGCAGAAATCCAAGAACATA +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNTNEGC*QKSKNI
Trigger: TATGTTCTTGGATTTCTGGCAGCAGCCCTCATTGGT...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCTGGACCAATGAGGGCTaGTGCCAGAAATCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGWTNEG*CQKSKN
Trigger: GTTCTTGGATTTCTGGCAGCAGCCCTCATTGGTCCA...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCAATAAGAGAACAGGGTaGACTGTGATTTCACTCATT +
Preference number: 4 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLNKRTG*TVISLI
Trigger: AATGAGTGAAATCACAGTGCACCCTGTTCTCTTATT...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATTCTTCCCCCTTCATCTaGTGTCGGGTCGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNSSPFI*CRVAEV
Trigger: CACCTCCGCGACCCGACACCAGATGAAGGGGGAAGA...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGGACGCCATCTCCTGTaGCTGGGCATCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCGRHLL*LGIFPL
Trigger: AAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGCCCTTGGGAAGCTTGTaGACGCCATCTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEPLGSL*TPSPVA
Trigger: AGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGG...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAATCTCTTCAGGAAAGCTaGGATCACATTATGAGGACG +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEESLQES*DHIMRT
Trigger: CGTCCTCATAATGTGATCCCAGCTTTCCTGAAGAGA...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGGACAATGACAGCAGATaGCCTTCACTGAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVDNDSR*PSLSVY
Trigger: GTACACACTCAGTGAAGGCCATCTGCTGTCATTGTC...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGGTTGGATAGTCAAGTaGTGCCCACAGATAGACAGG +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGGWIVK*CPQIDR
Trigger: CCTGTCTATCTGTGGGCACCACTTGACTATCCAACC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGCAAGGAGATGTTTCTTaGGTGAATCTGCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMQGDVS*VNLLLS
Trigger: ACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTG...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGGCTGGCTTCTATCTGTaGCTTCTGTGGGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVAGFYL*LLWATG
Trigger: TCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGC...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAGCCTGGGGGTCAGGATaGGTGCCTGAGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKAWGSG*VPEKPF
Trigger: GAAGGGCTTCTCAGGCACCCATCCTGACCCCCAGGC...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGCCTGGGGGTCAGGATaGGTGCCTGAGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSAWGSG*VPEKPF
Trigger: GAAGGGCTTCTCAGGCACCCATCCTGACCCCCAGGC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGGCCTGGTGGTGTCCGTaGTCCATCATGTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGAWWCP*SIMFCQ
Trigger: CTGACAGAACATGATGGACCACGGACACCACCAGGC...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTCCAAGAACATACCATaGCCAGGCCTTCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGSKNIP*PGLPPS
Trigger: GCTGGGAGGAAGGCCTGGCCATGGTATGTTCTTGGA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 72 bp CCGGCTGAAAGGAGGATGTGGTCTAGGCAAGTCTTCTaGTGTCCAAGGAGATGTTTCTTGGGTGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: PAERRMWSRQVF*CPRRCFLGESA
Trigger: AGCAGATTCACCCAAGAAACATCTCCTTGGACACAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACGGAGTCAGAGTAAAATaGTTTCGTGAAAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDGVRVK*FREREG
Trigger: ACCCTCCCTTTCACGAAATCATTTTACTCTGACTCC...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGCTGCACTTGAGTCCTTaGGATGTATCTCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVLHLSP*DVSLLR
Trigger: CCTAAGAAGAGATACATCTCAAGGACTCAAGTGCAG...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATGGTGTACTCACCTTCTaGTGGGCTGGGGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNGVLTF*WAGVAA
Trigger: AGCTGCAACCCCAGCCCATCAGAAGGTGAGTACACC...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGAACTACTGCAAGAACTaGGGCCCACAGGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMNYCKN*GPQGKR
Trigger: CCTTTTGCCCTGTGGGCCTCAGTTCTTGCAGTAGTT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTAAGCCACAGACTGCATTaGAAGAGAACACGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLSHRLH*KRTRVS
Trigger: TGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCT...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTAGCCACAGACTGCATTaGAAGAGAACACGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRASHRLH*KRTRVS
Trigger: TGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCT...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATGAAAGAAAACCGGAATaGGGTAGATGCATGAATGCA +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNERKPE*GRCMNA
Trigger: TGCATTCATGCATCTACCTCATTCCGGTTTTCTTTC...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGGCTCCCCACACCTTCTaGTGCCTAGAAGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVAPHTF*CLEASV
Trigger: AACAGAAGCTTCTAGGCATCAGAAGGTGTGGGGAGC...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGACAGAATGTAAGTACATaGGTAAGAGAGAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGQNVST*VREKLA
Trigger: TGCTAACTTCTCTCTTACTCATGTACTTACATTCTG...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGGTAGGGGATCAGACATaGAAGGCCACCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEVGDQT*KATPVF
Trigger: GAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTAC...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTACCAGGAAATCCCTGCTaGACGCCTTGCAGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLPGNPC*TPCRRK
Trigger: CTTTCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGG...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATCCAGGAAATCCCTGCTaGACGCCTTGCAGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDPGNPC*TPCRRK
Trigger: CTTTCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGG...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATTCCGGCGGAAGGCCTTaGCGCATTTGTCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDSGGRP*RICRTH
Trigger: ATGAGTGCGACAAATGCGGCAAGGCCTTCCGCCGGA...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGTCACTATGTAACAAGTaGTTTTGGCTCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVSLCNK*FWLLSS
Trigger: GCTGGAGAGGAGCCAAAAGCACTTGTTACATAGTGA...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGCAAAAACATGCCCGCTaGAATTGGGTAGGGACTATT +
Preference number: 4 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRQKHAR*NWVGTI
Trigger: AATAGTCCCTACCCAATTGCAGCGGGCATGTTTTTG...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTCAAAAACATGCCCGCTaGAATTGGGTAGGGACTATT +
Preference number: 4 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGQKHAR*NWVGTI
Trigger: AATAGTCCCTACCCAATTGCAGCGGGCATGTTTTTG...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGGCTCTGATGATTGCTTaGTGCCCTTGGGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMALMIA*CPWVRC
Trigger: ACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGC...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTAATAAGAGAACAGGGTaGACTGTGATTTCACTCATT +
Preference number: 4 (lower is better)
Translates to: SAAQSLNPLGALPRLPGANKRTG*TVISLI
Trigger: AATGAGTGAAATCACAGTGCACCCTGTTCTCTTATT...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGCTGATTATAGTGAGTaGCAGAAAACAGACAAGGTA +
Preference number: 4 (lower is better)
Translates to: VPLRASALLPSLRCGYRKADYSE*QKTDKV
Trigger: TACCTTGTCTGTTTTCTGGCACTCACTATAATCAGC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACAGGACTGGGACCACTaGCCCTTGGGAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKQDWDH*PLGSLW
Trigger: CCACAAGCTTCCCAAGGGCCAGTGGTCCCAGTCCTG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCAGTGTGCATGCGCTaGTGCTTGAGAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCPVCMR*CLRSSW
Trigger: CCAGGAGCTTCTCAAGCACCAGCGCATGCACACTGG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGTGGGGACACCCGTATaGCTTGGCCCCACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKVGTPV*LGPTVD
Trigger: ATCCACAGTGGGGCCAAGCCATACGGGTGTCCCCAC...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTGACAATGACAGCAGATaGCCTTCACTGAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRADNDSR*PSLSVY
Trigger: GTACACACTCAGTGAAGGCCATCTGCTGTCATTGTC...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATCAGCCCTGGTGGGGCTaGCTTCTATCTGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNQPWWG*LLSVAS
Trigger: AGAAGCCACAGATAGAAGCCAGCCCCACCAGGGCTG...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATCATGCCCGCTGCAATTaGGTAGGGACTATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNHARCN*VGTILE
Trigger: TTCCAGAATAGTCCCTACCCAATTGCAGCGGGCATG...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCATTTCACTCATTTTATaGCCCGCATGTGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELISLIL*PACGGF
Trigger: GAACCCACCACATGCGGGCCATAAAATGAGTGAAAT...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTATGGACCCTCAGATGCTaGCTCAGGCCTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLWTLRC*LRPAFF
Trigger: GAAGAATGCAGGCCTGAGTCAGCATCTGAGGGTCCA...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGTCAAGGCATGTGGACTaGAATACCTTGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVSRHVD*NTLMVL
Trigger: AAGTACCATCAAGGTATTTCAGTCCACATGCCTTGA...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGCGCATAAGAGAAAGATaGGACTGGTGGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIERIRER*DWWSGG
Trigger: GCCTCCTGACCACCAGTCTCATCTTTCTCTTATGCG...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTACTAGTCAAAGGAGATaGACGGACCATTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRATSQRR*TDHLHA
Trigger: TGCATGCAAATGGTCCGTTCATCTCCTTTGACTAGT...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATCCAACAAACGATAAATaGACGGGCAAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNPTNDK*TGKTWQ
Trigger: CTGCCATGTCTTGCCCGTTCATTTATCGTTTGTTGG...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACTTTATGCTACGTTCTaGGTTAATGCTGCATTCAAT +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTLYATF*VNAAFN
Trigger: ATTGAATGCAGCATTAACTCAGAACGTAGCATAAAG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTCACCGCAAACACCATaGACAGCTGTTCTGTCAACC +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGSPQTP*TAVLST
Trigger: GGTTGACAGAACAGCTGTTCATGGTGTTTGCGGTGA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAAAATGAGGTAGATGCATaGATGCACAGACAAGGATAT +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEENEVDA*MHRQGY
Trigger: ATATCCTTGTCTGTGCATTCATGCATCTACCTCATT...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCATAGTAACAAGGTTTaGAGGAGGAACATCTCATGC +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDHSNKV*RRNISC
Trigger: GCATGAGATGTTCCTCCTTCAAACCTTGTTACTATG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACAGAATGTAAGTACATaGGTAAGAGAGAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTQNVST*VREKLA
Trigger: TGCTAACTTCTCTCTTACTCATGTACTTACATTCTG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAGTAGGGGATCAGACATaGAAGGCCACCCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLVGDQT*KATPVF
Trigger: GAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTAC...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGCACTCGAAGGGCTTTaGCTCCCTCTCCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKALEGL*LPLHLL
Trigger: GAGCAGATGGAGAGGGAGGCAAAGCCCTTCGAGTGC...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGATGCTGACTCAGGCCTaGATTCTTCTTAAACCGTTT +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPMLTQA*ILLKPF
Trigger: AAACGGTTTAAGAAGAATGCAGGCCTGAGTCAGCAT...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTACTGATGCTTCTGCAGTaGCGAGCGCCTCTTGAACAC +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLLMLLQ*RAPLEH
Trigger: GTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTGGATAGTCAAGTGGTaGCCACAGATAGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGWIVKW*PQIDRE
Trigger: CTCCCTGTCTATCTGTGGGCACCACTTGACTATCCA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAGGAGCATCTCCAGTGTaGCGCAGTGGTCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKGASPV*RSGQVG
Trigger: TCCAACCTGACCACTGCGGCACACTGGAGATGCTCC...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGATGGCTGGGCTGCTTaGTCCCAGACCAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCDGWAA*SQTKFG
Trigger: TCCAAACTTGGTCTGGGAGCAAGCAGCCCAGCCATC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTAAAGGATGGCTGGGCTaGTTGCTCCCAGACCAAGTT +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLKGWLG*LLPDQV
Trigger: AACTTGGTCTGGGAGCAAGCAGCCCAGCCATCCTTT...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGCACCACTCAAAAACATaGCCGCTGCAATTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMHHSKT*PLQLGR
Trigger: CCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTG...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTTCTGTTTCCTTGTTTaGATTTCAGATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMFCFLV*ISDLEG
Trigger: GCCTTCCAGATCTGAAATGCAAACAAGGAAACAGAA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTACCAATGAGGGCTGCTaGCAGAAATCCAAGAACATA +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRATNEGC*QKSKNI
Trigger: TATGTTCTTGGATTTCTGGCAGCAGCCCTCATTGGT...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTGGACCAATGAGGGCTaGTGCCAGAAATCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGWTNEG*CQKSKN
Trigger: GTTCTTGGATTTCTGGCAGCAGCCCTCATTGGTCCA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGGGCTCCGCAGCTACGTaGCTTTTCCTGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEGSAAT*LFLCSL
Trigger: TAATGAGCACAGGAAAAGCCACGTAGCTGCGGAGCC...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACCAGTGTGCATGCGCTaGTGCTTGAGAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKPVCMR*CLRSSW
Trigger: CCAGGAGCTTCTCAAGCACCAGCGCATGCACACTGG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCTACTCGTGGTGGGTTaGCTGATGCTTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCLLVVG*LMLLQC
Trigger: GCACTGCAGAAGCATCAGCCAACCCACCACGAGTAG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGATGAGGACGCCATCGTaGAACAGCTCTGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGMRTPS*NSSVCF
Trigger: GAAACACACAGAGCTGTTCCACGATGGCGTCCTCAT...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTATATGGTCTTATGGCTTaGGAGAAAATTTCTAATGAG +
Preference number: 4 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLYGLMA*EKISNE
Trigger: CTCATTAGAAATTTTCTCCCAAGCCATAAGACCATA...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTCAGGAGCTCAAAGGATaGCTGGGCTGCTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSQELKG*LGCLLP
Trigger: TGGGAGCAAGCAGCCCAGCCATCCTTTGAGCTCCTG...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGTCACAATTTAATGGGTaGGGGAGGGCTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIESQFNG*GRAEEE
Trigger: CTCCTCCTCAGCCCTCCCCCACCCATTAAATTGTGA...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATGGACCCTCAGATGCTaGCTCAGGCCTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKWTLRC*LRPAFF
Trigger: GAAGAATGCAGGCCTGAGTCAGCATCTGAGGGTCCA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCAGTAAAATGATTTCGTaGAAGGGAGGGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELSKMIS*KGGWQK
Trigger: TTTTTGCCACCCTCCCTTTCACGAAATCATTTTACT...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGAGTAAAATGATTTCGTaGAAGGGAGGGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVSKMIS*KGGWQK
Trigger: TTTTTGCCACCCTCCCTTTCACGAAATCATTTTACT...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAAAGTCCGCATCTCGGATaGGGAAAGAGCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKSPHLG*GKSLLL
Trigger: GAGAAGCAGGCTCTTTCCTCATCCGAGATGCGGACT...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCCACAGCAGAAGCCTATaGACCAATCTCTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGHSRSL*TNLFLV
Trigger: AACTAGAAAGAGATTGGTTCATAGGCTTCTGCTGTG...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAACTTTATGCTACGTTCTaGGTTAATGCTGCATTCAAT +
Preference number: 4 (lower is better)
Translates to: DSQVVPTDRQGVRISDEELYATF*VNAAFN
Trigger: ATTGAATGCAGCATTAACTCAGAACGTAGCATAAAG...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAGCTCCCCACACCTTCTaGTGCCTAGAAGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLAPHTF*CLEASV
Trigger: AACAGAAGCTTCTAGGCATCAGAAGGTGTGGGGAGC...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATAGTAAACATCCAAAGTaGTGCAATGAGAACTACAGA +
Preference number: 4 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNSKHPK*CNENYR
Trigger: TCTGTAGTTCTCATTGCATCACTTTGGATGTTTACT...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGTTCATGCAGTCAGGTaGGACTTGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSVHAVR*DLARKQ
Trigger: CTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAAC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGCTGATTATAGTGAGTaGCAGAAAACAGACAAGGTA +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPADYSE*QKTDKV
Trigger: TACCTTGTCTGTTTTCTGGCACTCACTATAATCAGC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACGCTGATTATAGTGAGTaGCAGAAAACAGACAAGGTA +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDADYSE*QKTDKV
Trigger: TACCTTGTCTGTTTTCTGGCACTCACTATAATCAGC...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACATATGGTCTTATGGCTTaGGAGAAAATTTCTAATGAG +
Preference number: 4 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTYGLMA*EKISNE
Trigger: CTCATTAGAAATTTTCTCCCAAGCCATAAGACCATA...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGAATGTTCTGCAAATATaGTCTTATGGCTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWNVLQI*SYGLGE
Trigger: TTCTCCCAAGCCATAAGACCATATTTGCAGAACATT...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAATCCAGCCTGCCCACCTaGTGTACTCACCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKSSLPT*CTHLLM
Trigger: CATCAGAAGGTGAGTACACCAGGTGGGCAGGCTGGA...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGGCAGTCACAGAGTTCTaGCTAATCTATGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGAVTEF*LIYDGS
Trigger: GCTCCCATCATAGATTAGCCAGAACTCTGTGACTGC...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGGCTGAAAGGAGGATGTaGTCTAGGCAAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGAERRM*SRQVFL
Trigger: CAAGAAGACTTGCCTAGACCACATCCTCCTTTCAGC...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGCTGGCTTCTATCTGTaGCTTCTGTGGGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSAGFYL*LLWATG
Trigger: TCCAGTGGCCCACAGAAGCCACAGATAGAAGCCAGC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGATTGCTTGCTGCCCTTaGGTCAGGTGTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEIACCP*VRCSVL
Trigger: CAGAACTGAACACCTGACCCAAGGGCAGCAAGCAAT...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGAGACCCACTCAAGCTaGCTCAAGTCAAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCETHSS*LKSRSL
Trigger: CAGACTCCTTGACTTGAGCCAGCTTGAGTGGGTCTC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCTCACAATTTAATGGGTaGGGGAGGGCTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCSQFNG*GRAEEE
Trigger: CTCCTCCTCAGCCCTCCCCCACCCATTAAATTGTGA...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAACTGTTCATCTCCTTTaGCTCTGCCATCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKTVHLL*LCHPLW
Trigger: CCAGAGGGGATGGCAGAGTCAAAGGAGATGAACAGT...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGGGAGTCAGAGTAAAATaGTTTCGTGAAAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVGVRVK*FREREG
Trigger: ACCCTCCCTTTCACGAAATCATTTTACTCTGACTCC...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGACTAGTCAAAGGAGATaGACGGACCATTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMTSQRR*TDHLHA
Trigger: TGCATGCAAATGGTCCGTTCATCTCCTTTGACTAGT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGCTTTATGCTACGTTCTaGGTTAATGCTGCATTCAAT +
Preference number: 4 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVLYATF*VNAAFN
Trigger: ATTGAATGCAGCATTAACTCAGAACGTAGCATAAAG...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGAGCCACAGACTGCATTaGAAGAGAACACGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIESHRLH*KRTRVS
Trigger: TGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCT...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGACCAGAGGCAAGAAATaGTCTTGGCGAAATTACAGG +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVTRGKK*SWRNYR
Trigger: CCTGTAATTTCGCCAAGATCATTTCTTGCCTCTGGT...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCTCCAAAGTGATGCAATaGGAACTACAGAATGTAAGT +
Preference number: 4 (lower is better)
Translates to: ISNESLMKGSSLSDRAELSKVMQ*ELQNVS
Trigger: ACTTACATTCTGTAGTTCTCATTGCATCACTTTGGA...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACATCGTCCTAATGTTCTaGAAATATGGTCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDIVLMF*KYGLMA
Trigger: AGCCATAAGACCATATTTGCAGAACATTAGGACGAT...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAAAAGGATGGCTGGGCTaGTTGCTCCCAGACCAAGTT +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKKGWLG*LLPDQV
Trigger: AACTTGGTCTGGGAGCAAGCAGCCCAGCCATCCTTT...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTTCAGAAGGGTTCCACTaGCCTCCAAACCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLSEGFH*PPNLCF
Trigger: AAAGCAAAGGTTTGGAGGGCAGTGGAACCCTTCTGA...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACATCAAGCACATGGAATaGAACACCACTCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDIKHME*NTTQKH
Trigger: ATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGAT...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGCTCTGATGATTGCTTaGTGCCCTTGGGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSALMIA*CPWVRC
Trigger: ACACCTGACCCAAGGGCAGCAAGCAATCATCAGAGC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGGTTCTGTCAGCTCTATaGTCTGATGATTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGVLSAL*SDDCLL
Trigger: CAGCAAGCAATCATCAGAGCATAGAGCTGACAGAAC...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGGTTCTGTCAGCTCTATaGTCTGATGATTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMVLSAL*SDDCLL
Trigger: CAGCAAGCAATCATCAGAGCATAGAGCTGACAGAAC...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATTGGACTCTCTGGTGCTaGACAAGCAGGACTTTAAGC +
Preference number: 4 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDWTLWC*TSRTLS
Trigger: GCTTAAAGTCCTGCTTGTCCAGCACCAGAGAGTCCA...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGCTTATAAATTGCTGGTaGCAGTATAAATCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPLINCW*QYKSVS
Trigger: TGAGACCGATTTATACTGCCACCAGCAATTTATAAG...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAATCCAGTGTGCCGCAGTaGTCAGGTTGGATAGTCAAG +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKSSVPQ*SGWIVK
Trigger: CTTGACTATCCAACCTGACCACTGCGGCACACTGGA...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACACAAAATCAAGCACATaGAATGCAACACCACTCAAA +
Preference number: 4 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDTKSST*NATPLK
Trigger: TTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGT...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCAAATACAAACTGGGGTaGGACATAGCTATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGKYKLG*DIAIVL
Trigger: GAGAACAATAGCTATGTCCCACCCCAGTTTGTATTT...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
3UTR CAA 72 bp GAAATTACAGGACACACGTTAAAGCCACAGACTGCATaGAAAGAGAACACGGGTTTCACCGCAAACACCATG +
Preference number: 4 (lower is better)
Translates to: EITGHTLKPQTA*KENTGFTANTM
Trigger: CATGGTGTTTGCGGTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAAGAGACACACACGGATaGCTCATCATGCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKRDTHG*LIMPQN
Trigger: GTTCTGAGGCATGATGAGTCATCCGTGTGTGTCTCT...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGTGGACTGAAATACCTTaGTGGTACTTCCTACCAGTT +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMWTEIP*WYFLPV
Trigger: AACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCA...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACCGTTTGGCCTCACAATaGCATTTTGGGTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHRLASQ*HFGCFK
Trigger: TTTAAAGCACCCAAAATGTCATTGTGAGGCCAAACG...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACGAAAGAAAACCGGAATaGGGTAGATGCATGAATGCA +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHERKPE*GRCMNA
Trigger: TGCATTCATGCATCTACCTCATTCCGGTTTTCTTTC...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCAGTAAACATCCAAAGTaGTGCAATGAGAACTACAGA +
Preference number: 4 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGSKHPK*CNENYR
Trigger: TCTGTAGTTCTCATTGCATCACTTTGGATGTTTACT...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTATCGTCCTAATGTTCTaGAAATATGGTCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRAIVLMF*KYGLMA
Trigger: AGCCATAAGACCATATTTGCAGAACATTAGGACGAT...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACTCTTCTTAGGGGCATaGTCTCAACTATTTTATTTT +
Preference number: 4 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPLFLGA*SQLFYF
Trigger: AAAATAAAATAGTTGAGAGCATGCCCCTAAGAAGAG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGAATTTTCCCCTAGCTaGCCACAGCAGAAGCCTATG +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSEFSPS*PQQKPM
Trigger: CATAGGCTTCTGCTGTGGGCAGCTAGGGGAAAATTC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGTCACTATGTAACAAGTaGTTTTGGCTCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIESLCNK*FWLLSS
Trigger: GCTGGAGAGGAGCCAAAAGCACTTGTTACATAGTGA...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATGGACTATTCTGGAAATaGAAGAGTGGGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNGLFWK*KSGVTQ
Trigger: CTGTGTCACCCCACTCTTGCATTTCCAGAATAGTCC...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATGGACCAATGAGGGCTaGTGCCAGAAATCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKWTNEG*CQKSKN
Trigger: GTTCTTGGATTTCTGGCAGCAGCCCTCATTGGTCCA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTACACCTTCTGATGGGCTaGGGTTGCAGCTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLHLLMG*GCSFLF
Trigger: AAACAAAAAGCTGCAACCCCAGCCCATCAGAAGGTG...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGCAGTCACAGAGTTCTaGCTAATCTATGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDAVTEF*LIYDGS
Trigger: GCTCCCATCATAGATTAGCCAGAACTCTGTGACTGC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTCAAGGAGATGTTTCTTaGGTGAATCTGCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLQGDVS*VNLLLS
Trigger: ACTGAGCAGCAGATTCACCCAAGAAACATCTCCTTG...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACATGCCCGCTGCAATTaGGTAGGGACTATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKHARCN*VGTILE
Trigger: TTCCAGAATAGTCCCTACCCAATTGCAGCGGGCATG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTAACAAAATCAAGCACATaGAATGCAACACCACTCAAA +
Preference number: 4 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLTKSST*NATPLK
Trigger: TTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGT...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAATTTGCATTTCAGATCTaGAAGGCCTGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKFAFQI*KAWWCP
Trigger: CGGACACCACCAGGCCTTCCAGATCTGAAATGCAAA...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATTTGCATTTCAGATCTaGAAGGCCTGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKFAFQI*KAWWCP
Trigger: CGGACACCACCAGGCCTTCCAGATCTGAAATGCAAA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGAGTAAAATGATTTCGTaGAAGGGAGGGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: CSVLAELIWPRSGVANHMSKMIS*KGGWQK
Trigger: TTTTTGCCACCCTCCCTTTCACGAAATCATTTTACT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATCTGCACTTGAGTCCTTaGGATGTATCTCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNLHLSP*DVSLLR
Trigger: CCTAAGAAGAGATACATCTCAAGGACTCAAGTGCAG...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGAATGAGGTAGATGCATaGATGCACAGACAAGGATAT +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVNEVDA*MHRQGY
Trigger: ATATCCTTGTCTGTGCATTCATGCATCTACCTCATT...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGATGCTGACTCAGGCCTaGATTCTTCTTAAACCGTTT +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIEMLTQA*ILLKPF
Trigger: AAACGGTTTAAGAAGAATGCAGGCCTGAGTCAGCAT...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCATTTCACTCATTTTATaGCCCGCATGTGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCISLIL*PACGGF
Trigger: GAACCCACCACATGCGGGCCATAAAATGAGTGAAAT...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGAAATACAAACTGGGGTaGGACATAGCTATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVKYKLG*DIAIVL
Trigger: GAGAACAATAGCTATGTCCCACCCCAGTTTGTATTT...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCACAGCAGAAGCCTATaGACCAATCTCTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCHSRSL*TNLFLV
Trigger: AACTAGAAAGAGATTGGTTCATAGGCTTCTGCTGTG...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCGTGACATTTTGCATCTaGCATAGCAGTACACCTAGA +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCVTFCI*HSSTPR
Trigger: TCTAGGTGTACTGCTATGTCAGATGCAAAATGTCAC...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAGAACAGGGTGCACTGTaGTTTCACTCATTTTATGGC +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKEQGAL*FHSFYG
Trigger: GCCATAAAATGAGTGAAATCACAGTGCACCCTGTTC...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACATCAAGCACATGGAATaGAACACCACTCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: YRTHVKATDCIEREHGFHIKHME*NTTQKH
Trigger: ATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGAT...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGTTCTGTCAGCTCTATaGTCTGATGATTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSVLSAL*SDDCLL
Trigger: CAGCAAGCAATCATCAGAGCATAGAGCTGACAGAAC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTTTCTGTTTCCTTGTTTaGATTTCAGATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLFCFLV*ISDLEG
Trigger: GCCTTCCAGATCTGAAATGCAAACAAGGAAACAGAA...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGACACTTATAAATTGCTaGTGGCAGTATAAATCGGTC +
Preference number: 4 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVTLINC*WQYKSV
Trigger: GACCGATTTATACTGCCACCAGCAATTTATAAGTGT...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTTGGACTGAAATACCTTaGTGGTACTTCCTACCAGTT +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSWTEIP*WYFLPV
Trigger: AACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCA...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTTCAAGGCATGTGGACTaGAATACCTTGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSSRHVD*NTLMVL
Trigger: AAGTACCATCAAGGTATTTCAGTCCACATGCCTTGA...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTCGTTTGGCCTCACAATaGCATTTTGGGTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSRLASQ*HFGCFK
Trigger: TTTAAAGCACCCAAAATGTCATTGTGAGGCCAAACG...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAACAATGGGATCCCTCATaGAACCCAACAAACGATAAA +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKQWDPS*NPTNDK
Trigger: TTTATCGTTTGTTGGGTTTCATGAGGGATCCCATTG...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACAATGGGATCCCTCATaGAACCCAACAAACGATAAA +
Preference number: 4 (lower is better)
Translates to: NDLGEITGHTLKPQTALKQWDPS*NPTNDK
Trigger: TTTATCGTTTGTTGGGTTTCATGAGGGATCCCATTG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTGTGACATTTTGCATCTaGCATAGCAGTACACCTAGA +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSVTFCI*HSSTPR
Trigger: TCTAGGTGTACTGCTATGTCAGATGCAAAATGTCAC...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGCTCTTCTTAGGGGCATaGTCTCAACTATTTTATTTT +
Preference number: 4 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGLFLGA*SQLFYF
Trigger: AAAATAAAATAGTTGAGAGCATGCCCCTAAGAAGAG...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTCTGATGGGCTGGGGTTaGAGCTTTTTGTTTGTAATT +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSLMGWG*SFLFVI
Trigger: AATTACAAACAAAAAGCTGCAACCCCAGCCCATCAG...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTAATAAGAGAACAGGGTaGACTGTGATTTCACTCATT +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLNKRTG*TVISLI
Trigger: AATGAGTGAAATCACAGTGCACCCTGTTCTCTTATT...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTAATGTTCTGCAAATATaGTCTTATGGCTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: INERARHGRVLLGKGARLNVLQI*SYGLGE
Trigger: TTCTCCCAAGCCATAAGACCATATTTGCAGAACATT...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGCTCTTCTTAGGGGCATaGTCTCAACTATTTTATTTT +
Preference number: 4 (lower is better)
Translates to: QTGVGHSYCSQRYANDIELFLGA*SQLFYF
Trigger: AAAATAAAATAGTTGAGAGCATGCCCCTAAGAAGAG...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTTTCTGTTTCCTTGTTTaGATTTCAGATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSFCFLV*ISDLEG
Trigger: GCCTTCCAGATCTGAAATGCAAACAAGGAAACAGAA...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATACACTTATAAATTGCTaGTGGCAGTATAAATCGGTC +
Preference number: 4 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNTLINC*WQYKSV
Trigger: GACCGATTTATACTGCCACCAGCAATTTATAAGTGT...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR TCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAAGTAAACATCCAAAGTaGTGCAATGAGAACTACAGA +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKSKHPK*CNENYR
Trigger: TCTGTAGTTCTCATTGCATCACTTTGGATGTTTACT...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR GCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAATCGTCCTAATGTTCTaGAAATATGGTCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKIVLMF*KYGLMA
Trigger: AGCCATAAGACCATATTTGCAGAACATTAGGACGAT...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTCTTATAAATTGCTGGTaGCAGTATAAATCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSLINCW*QYKSVS
Trigger: TGAGACCGATTTATACTGCCACCAGCAATTTATAAG...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAACACTTATAAATTGCTaGTGGCAGTATAAATCGGTC +
Preference number: 4 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKTLINC*WQYKSV
Trigger: GACCGATTTATACTGCCACCAGCAATTTATAAGTGT...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCTATGGTCTTATGGCTTaGGAGAAAATTTCTAATGAG +
Preference number: 4 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCYGLMA*EKISNE
Trigger: CTCATTAGAAATTTTCTCCCAAGCCATAAGACCATA...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTAATGTTCTGCAAATATaGTCTTATGGCTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSNVLQI*SYGLGE
Trigger: TTCTCCCAAGCCATAAGACCATATTTGCAGAACATT...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CCA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTACAAAATCAAGCACATaGAATGCAACACCACTCAAA +
Preference number: 4 (lower is better)
Translates to: KYISATKLFISFDSAIPSTKSST*NATPLK
Trigger: TTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGT...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTGGGGACTCCGTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGCTCCTTCGGAAGAGCTaGCCGCAGTGGGGACACCCG +
Preference number: 5 (lower is better)
Translates to: LGTPSLSRGTTGRFYSWWLLRKS*PQWGHP
Trigger: CGGGTGTCCCCACTGCGGCAAGCTCTTCCGAAGGAG...CCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGACGGAGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS CCA 90 bp TCTCCATCTGCTCCCTCTTCTCCGCGGCATTCTCCAGGGCCCTACTaGGGCCGGGCTGGGGCTCCGCAGCTACGTGGCTTTTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: SPSAPSSPRHSPGPY*GRAGAPQLRGFSCA
Trigger: AGCACAGGAAAAGCCACGTAGCTGCGGAGCCCCAGCCCGGCCCCAGTAGGGCCCTGGAGAATGCCGCGGAGAAGAGGGAGCAGATGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS-3UTR CAA 90 bp CTGGGGACTCCGTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGCGGAAGAGGTGGGTGTaGACTTTGAACGACCGCCCG +
Preference number: 5 (lower is better)
Translates to: LGTPSLSRGTTGRFYSWWRKRWV*TLNDRP
Trigger: CGGGCGGTCGTTCAAAGTCAACACCCACCTCTTCCG...CCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGACGGAGTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR CAA 90 bp CTGGGGACTCCGTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGTCCTGGGCATGGCTGTaGCAAATCATAGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LGTPSLSRGTTGRFYSWWSWAWL*QIIAQG
Trigger: GCCCTGGGCTATGATTTGCAACAGCCATGCCCAGGA...CCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGACGGAGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS GCA 90 bp CAGTCGTCGCAGTCGAAGGGCAGGTGGCCAGTGTGCATGCGCTGGTaGTTGAGAAGCTCCTGGCGATCCAGGAAATCCCTGCTGCACGCC +
Preference number: 5 (lower is better)
Translates to: QSSQSKGRWPVCMRW*LRSSWRSRKSLLHA
Trigger: GGCGTGCAGCAGGGATTTCCTGGATCGCCAGGAGCTTCTCAAGCACCAGCGCATGCACACTGGCCACCTGCCCTTCGACTGCGACGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 90 bp GGACCACTGGCCCTTGGGAAGCTTGTGGACGCCATCTCCTGTGGCTaGGCATCTTCCCCCTTCATCTGGTGTCGGGTCGCGGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: GPLALGKLVDAISCG*ASSPFIWCRVAEVL
Trigger: AAGCACCTCCGCGACCCGACACCAGATGAAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 90 bp ACTGGGACCACTGGCCCTTGGGAAGCTTGTGGACGCCATCTCCTGTaGCTGGGCATCTTCCCCCTTCATCTGGTGTCGGGTCGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: TGTTGPWEACGRHLL*LGIFPLHLVSGRGG
Trigger: ACCTCCGCGACCCGACACCAGATGAAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 90 bp TCCCTCTTCTCCGCGGCATTCTCCAGGGCCCTACTGGGGCCGGGCTaGGGCTCCGCAGCTACGTGGCTTTTCCTGTGCTCATTAAACTCC +
Preference number: 5 (lower is better)
Translates to: SLFSAAFSRALLGPG*GSAATWLFLCSLNS
Trigger: GGAGTTTAATGAGCACAGGAAAAGCCACGTAGCTGCGGAGCCCCAGCCCGGCCCCAGTAGGGCCCTGGAGAATGCCGCGGAGAAGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 90 bp CCGCAGTCGTCGCAGTCGAAGGGCAGGTGGCCAGTGTGCATGCGCTaGTGCTTGAGAAGCTCCTGGCGATCCAGGAAATCCCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PQSSQSKGRWPVCMR*CLRSSWRSRKSLLH
Trigger: GTGCAGCAGGGATTTCCTGGATCGCCAGGAGCTTCTCAAGCACCAGCGCATGCACACTGGCCACCTGCCCTTCGACTGCGACGACTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS-3UTR CAA 90 bp CTGGGGACTCCGTCCCTGTCCCGCGGGACCACAGGGCGTTTCTACTCGTGGTGGGTAAAGGTGCCAGACTaGCCCCTGGTAGAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: LGTPSLSRGTTGRFYSWWVKVPD*PLVEVN
Trigger: GTTGACCTCTACCAGGGGCAAGTCTGGCACCTTTAC...CCACCACGAGTAGAAACGCCCTGTGGTCCCGCGGGACAGGGACGGAGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS-3UTR CAA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTTGGCCCTTGGGAAGCTaGTGGACGCCATCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: SALVGPREGHTSLPGPPSWPLGS*WTPSPV
Trigger: CACAGGAGATGGCGTCCACAAGCTTCCCAAGGGCCA...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTGATGCTTCTGCAGTGCCGAGCGCCTCTTGAACACGCGGCCACACTGGCTGCAGCAGTCAGGTGCGACTaGGCCAGGAAGCAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: LMLLQCRAPLEHAATLAAAVRCD*ARKQPS
Trigger: ACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGC...TGCAGCCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370251.3
CDS CCA 90 bp AGAGTCCCCGTGCTGTCTGAATTCAGGACTGGGACCACTGGCCCTTaGGAAGCTTGTGGACGCCATCTCCTGTGGCTGGGCATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RVPVLSEFRTGTTGP*EACGRHLLWLGIFP
Trigger: GGGGAAGATGCCCAGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCCAGTCCTGAATTCAGACAGCACGGGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS-3UTR CAA 90 bp TCAGCCTTGGTGGGCCCACGAGAAGGGCACACTTCCTTGCCAGGCCCTCCTAGTAGGTGGGTGTTGACTTaGAACGACCGCCCGCATTCC +
Preference number: 5 (lower is better)
Translates to: SALVGPREGHTSLPGPPSRWVLT*NDRPHS
Trigger: GGAATGCGGGCGGTCGTTCAAAGTCAACACCCACCT...ACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGATAGTCAAGTGGTGCCCACATGCTCGGCCAGCCCGTaGACCCCTCGGAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: EHLQCAAVVRLDSQVVPTCSASP*TPRKDL
Trigger: CAAGTCCTTCCGAGGGGTCAACGGGCTGGCCGAGCA...TGTGGGCACCACTTGACTATCCAACCTGACCACTGCGGCACACTGGAGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTAGCTCTGCCTCAGCCTaGGTGGGCCCACGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: SAAQSLNPLGALPRLPGASSASA*VGPREG
Trigger: CCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGCT...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS TCA 90 bp GATTCTGTGGGCTCCCTCTCTTCCCGTCAGAGTCCCCGTGCTGTCTaGATTCAGGACTGGGACCACTGGCCCTTGGGAAGCTTGTGGACG +
Preference number: 5 (lower is better)
Translates to: DSVGSLSSRQSPRAV*IQDWDHWPLGSLWT
Trigger: CGTCCACAAGCTTCCCAAGGGCCAGTGGTCCCAGTCCTGAATTCAGACAGCACGGGGACTCTGACGGGAAGAGAGGGAGCCCACAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 90 bp GGCTGCTCTAGGAGCATCAGGTGTCATGCTGCGGCCAGCAGGAAGTaGGTAAGTGCCCAATACAGGGACCCCAGGAGTCTGCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: GCSRSIRCHAAASRK*VSAQYRDPRSLLWA
Trigger: TGCCCAAAGCAGACTCCTGGGGTCCCTGTATTGGGCACTTACCCACTTCCTGCTGGCCGCAGCATGACACCTGATGCTCCTAGAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CCA 90 bp GGCACCAGAGGGCCAGCTCAGATTGTGGAGGATTCACCACCAGACTaGGAAGCAACATCCTGGGCTCCAGAGTTGGCCACTCATCATGGC +
Preference number: 5 (lower is better)
Translates to: GTRGPAQIVEDSPPD*EATSWAPELATHHG
Trigger: GCCATGATGAGTGGCCAACTCTGGAGCCCAGGATGTTGCTTCCCAGTCTGGTGGTGAATCCTCCACAATCTGAGCTGGCCCTCTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS-3UTR CAA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTCGCACTCGAAGGGCTTaGCCTCCCTCTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: SAAQSLNPLGALPRLPGARTRRA*PPSPSA
Trigger: AGCAGATGGAGAGGGAGGCAAAGCCCTTCGAGTGCG...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTGCTCGGCCAGCCCGTaGACCCCTCGGAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMCSASP*TPRKDL
Trigger: CAAGTCCTTCCGAGGGGTCAACGGGCTGGCCGAGCA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGGGACACCCGTATGGCTaGGCCCCACTGTGGATGCGC +
Preference number: 5 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMGHPYG*APLWMR
Trigger: GCGCATCCACAGTGGGGCCAAGCCATACGGGTGTCC...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAACTCCTTCGGAAGAGCTaGCCGCAGTGGGGACACCCG +
Preference number: 5 (lower is better)
Translates to: DSQVVPTDRQGVRISDEELLRKS*PQWGHP
Trigger: CGGGTGTCCCCACTGCGGCAAGCTCTTCCGAAGGAG...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGAAAGATGAGACTGGTGGTCAGGAGGCCTGGGGTCTATCCCCAGTTCTGGAATAGTGCCGAGCGCCTCTaGAACACGCGGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: RKMRLVVRRPGVYPQFWNSAERL*NTRPHW
Trigger: CCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACT...ATTCCAGAACTGGGGATAGACCCCAGGCCTCCTGACCACCAGTCTCATCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTGAAGGGCACACTTCCTaGCCAGGCCCTCCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTEGHTS*PGPPSV
Trigger: GACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTC...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp ACAAGCCATCGGAGGGGCAGGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCAACATGCCCGCTGCAATaGGGTAGGGACTATTCTGGA +
Preference number: 5 (lower is better)
Translates to: TSHRRGRVPLRASALLPSTCPLQ*GRDYSG
Trigger: TCCAGAATAGTCCCTACCCAATTGCAGCGGGCATGT...TGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCCTGCCCCTCCGATGGCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTGCAGTCAGGTGCGACTaGGCCAGGAAGCAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: SAAQSLNPLGALPRLPGAAVRCD*ARKQPS
Trigger: ACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGC...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS CCA 90 bp CTTGTGGACGCCATCTCCTGTGGCTGGGCATCTTCCCCCTTCATCTaGTGTCGGGTCGCGGAGGTGCTTTCAGAGTACTTAGCAGGATCA +
Preference number: 5 (lower is better)
Translates to: LVDAISCGWASSPFI*CRVAEVLSEYLAGS
Trigger: TGATCCTGCTAAGTACTCTGAAAGCACCTCCGCGACCCGACACCAGATGAAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 90 bp GCTCAGATTGTGGAGGATTCACCACCAGACTGGGAAGCAACATCCTaGGCTCCAGAGTTGGCCACTCATCATGGCCAGGCCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: AQIVEDSPPDWEATS*APELATHHGQAFLP
Trigger: TGGGAGGAAGGCCTGGCCATGATGAGTGGCCAACTCTGGAGCCCAGGATGTTGCTTCCCAGTCTGGTGGTGAATCCTCCACAATCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CCA 90 bp AGGAAGTGGGTAAGTGCCCAATACAGGGACCCCAGGAGTCTGCTTTaGGCACCAGAGGGCCAGCTCAGATTGTGGAGGATTCACCACCAG +
Preference number: 5 (lower is better)
Translates to: RKWVSAQYRDPRSLL*APEGQLRLWRIHHQ
Trigger: CTGGTGGTGAATCCTCCACAATCTGAGCTGGCCCTCTGGTGCCCAAAGCAGACTCCTGGGGTCCCTGTATTGGGCACTTACCCACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS-3UTR CAA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTCCCTGCTGCACGCCTaGCAGGCGAAAGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VPLRASALLPSLRCGYRKSLLHA*QAKGFS
Trigger: GGAAAAGCCTTTCGCCTGCAAGGCGTGCAGCAGGGA...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCGGACACCCGTATGGCTaGGCCCCACTGTGGATGCGC +
Preference number: 5 (lower is better)
Translates to: ISNESLMKGSSLSDRAELGHPYG*APLWMR
Trigger: GCGCATCCACAGTGGGGCCAAGCCATACGGGTGTCC...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGAGTGCCGAGCGCCTCTaGAACACGCGGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRSAERL*NTRPHW
Trigger: CCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACT...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGATCCTGGGCATGGCTGTaGCAAATCATAGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGSWAWL*QIIAQG
Trigger: GCCCTGGGCTATGATTTGCAACAGCCATGCCCAGGA...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGTGGGACCACTGGCCCTaGGGAAGCTTGTGGACGCCA +
Preference number: 5 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVWDHWP*GSLWTP
Trigger: TGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCCA...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGCGCACTCGAAGGGCTTaGCCTCCCTCTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMRTRRA*PPSPSA
Trigger: AGCAGATGGAGAGGGAGGCAAAGCCCTTCGAGTGCG...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGCGGAAGAGGTGGGTGTaGACTTTGAACGACCGCCCG +
Preference number: 5 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWRKRWV*TLNDRP
Trigger: CGGGCGGTCGTTCAAAGTCAACACCCACCTCTTCCG...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCTCCTTCGGAAGAGCTaGCCGCAGTGGGGACACCCG +
Preference number: 5 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRALLRKS*PQWGHP
Trigger: CGGGTGTCCCCACTGCGGCAAGCTCTTCCGAAGGAG...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTTGGATCCGCCGGTGCTaGGTGAGCTCCGAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGWIRRC*VSSELL
Trigger: AAGGAGCTCGGAGCTCACCAAGCACCGGCGGATCCA...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGGAAGGGCACACTTCCTaGCCAGGCCCTCCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWEGHTS*PGPPSV
Trigger: GACACTAGGAGGGCCTGGCAAGGAAGTGTGCCCTTC...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTTGCTCTGATGATTGCTaGCTGCCCTTGGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: SAAQSLNPLGALPRLPGACSDDC*LPLGQV
Trigger: CACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCA...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGATGCTCTGATGATTGCTaGCTGCCCTTGGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGCSDDC*LPLGQV
Trigger: CACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCA...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS TCA 90 bp TTGGGCGATGGGTCTGACACCAGTAGCACTTGTCCTTGTGCCAGGTaGGGGACCAAGGCAGGATTTAAAACAGGAACGCCTGCTCATGGG +
Preference number: 5 (lower is better)
Translates to: LGDGSDTSSTCPCAR*GTKAGFKTGTPAHG
Trigger: CCCATGAGCAGGCGTTCCTGTTTTAAATCCTGCCTTGGTCCCTCACCTGGCACAAGGACAAGTGCTACTGGTGTCAGACCCATCGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS-3UTR CAA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACCGCACTCGAAGGGCTTaGCCTCCCTCTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDRTRRA*PPSPSA
Trigger: AGCAGATGGAGAGGGAGGCAAAGCCCTTCGAGTGCG...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCAGCCGCAGTGGTCAGGTaGGATAGTCAAGTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPAAVVR*DSQVVP
Trigger: GGGCACCACTTGACTATCCAACCTGACCACTGCGGC...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TTCTGGCTAATCTATGATGGGAGCATCTCCAGTGTGCCGCAGTGGTCAGGTTGGAATCCACTCGGAGCATaGCCAAGGCTCCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: FWLIYDGSISSVPQWSGWNPLGA*PRLPGA
Trigger: AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATT...CCAACCTGACCACTGCGGCACACTGGAGATGCTCCCATCATAGATTAGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp ATTTCTAATGAGAGCCTCATGAAGGGATCGTCACTGAGCGACCGTGCAGAGCTCCGAGCCTCTGCTCTGTaGCCCTCACTTAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: ISNESLMKGSSLSDRAELRASAL*PSLRCG
Trigger: GCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCG...GAGCTCTGCACGGTCGCTCAGTGACGATCCCTTCATGAGGCTCTCATTAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GCTGCCAGCTTCTATCAGCATAACGCACAAGCCATCGGAGGGGCAGGGTTCCTCGCTGTTCTGTCAACCTaGACGGCAAAGACCAGATCT +
Preference number: 5 (lower is better)
Translates to: AASFYQHNAQAIGGAGFLAVLST*TAKTRS
Trigger: AGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC...GAGGAACCCTGCCCCTCCGATGGCTTGTGCGTTATGCTGATAGAAGCTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTACTGATTGCTTGCTGCCCTaGGGTCAGGTGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LGEPTGNGSSDPGGPASTDCLLP*GQVFSS
Trigger: AGAACTGAACACCTGACCCAAGGGCAGCAAGCAATC...AGTAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTGCTCTGATGATTGCTaGCTGCCCTTGGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: VPLRASALLPSLRCGYRKCSDDC*LPLGQV
Trigger: CACCTGACCCAAGGGCAGCAAGCAATCATCAGAGCA...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS TCA 90 bp CTTCATGCTCTTCCCAGACACGTGGACTTCGACAGCTCCCAAATCTaGCTCCCAACGTCTCTCCTCCTAAAACCTCCTCCCCACTGCACA +
Preference number: 5 (lower is better)
Translates to: LHALPRHVDFDSSQI*LPTSLLLKPPPHCT
Trigger: TGTGCAGTGGGGAGGAGGTTTTAGGAGGAGAGACGTTGGGAGTCAGATTTGGGAGCTGTCGAAGTCCACGTGTCTGGGAAGAGCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS CCA 90 bp CCAAGAGGAGTTGGGGGAGCTCATACTACTCTGACATATCAGGTGTaGCAGACCCATTGTGTTTCCCCACAACCCAGGGAGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PRGVGGAHTTLTYQV*QTHCVSPQPREKVS
Trigger: GCTCACCTTCTCCCTGGGTTGTGGGGAAACACAATGGGTCTGCCACACCTGATATGTCAGAGTAGTATGAGCTCCCCCAACTCCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS-3UTR CAA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTGCTCGGCCAGCCCGTaGACCCCTCGGAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGCSASP*TPRKDL
Trigger: CAAGTCCTTCCGAGGGGTCAACGGGCTGGCCGAGCA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATTGGATCCGCCGGTGCTaGGTGAGCTCCGAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNWIRRC*VSSELL
Trigger: AAGGAGCTCGGAGCTCACCAAGCACCGGCGGATCCA...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAGGCCTGGTGGTGTCCGTGGTCCATCATGTTCTGTCAGCTCTATGCTCTGATGTCTACTCGTGGTGGGTaGGCTGATGCTTCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: KAWWCPWSIMFCQLYALMSTRGG*ADASAV
Trigger: CACTGCAGAAGCATCAGCCAACCCACCACGAGTAGA...CATCAGAGCATAGAGCTGACAGAACATGATGGACCACGGACACCACCAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAGCTCCCAGACCAAGTTaGGACCACTCCATTGATCTA +
Preference number: 5 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLAPRPS*DHSIDL
Trigger: TAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGC...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCCGAGCCTCTGCTCTGTaGCCCTCACTTAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGRASAL*PSLRCG
Trigger: GCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCG...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TCTGCTGCTCAGTCACTGAATCCACTCGGAGCATTGCCAAGGCTCCCAGGAGCTAGAAGCCCTTCCAAGTaGTGTCTGCTAGGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SAAQSLNPLGALPRLPGARSPSK*CLLGSS
Trigger: AGAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCT...AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACTGAGCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTAGCAGTCAGGTGCGACTaGGCCAGGAAGCAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLAVRCD*ARKQPS
Trigger: ACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGC...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS GCA 90 bp CTGGAAAACACACCACTGAAGCCTTTCTTCTGGAATTCAGTTGGCTaGTCTAGGAGCATCAGGTGTCATGCTGCGGCCAGCAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LENTPLKPFFWNSVG*SRSIRCHAAASRKW
Trigger: CCACTTCCTGCTGGCCGCAGCATGACACCTGATGCTCCTAGAGCAGCCAACTGAATTCCAGAAGAAAGGCTTCAGTGGTGTGTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CCA 90 bp CAATCACTTTCCTGGATGGAAACTCAGCTTCCCCACCTGGATGATTaGAACTCCAAGCCCAGTGGACATCCAATCCTTGGCAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QSLSWMETQLPHLDD*NSKPSGHPILGSLQ
Trigger: CTGGAGGCTGCCAAGGATTGGATGTCCACTGGGCTTGGAGTTCCAATCATCCAGGTGGGGAAGCTGAGTTTCCATCCAGGAAAGTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS-3UTR CAA 90 bp AGCCCCTCCCTACCCCACATCCAGATTTGTCCTCTCTCATTCTTGGATTCAAGGTTAGCAGGATCAGTGTaGGGCGATGGGTCTGACACC +
Preference number: 5 (lower is better)
Translates to: SPSLPHIQICPLSFLDSRLAGSV*GDGSDT
Trigger: GGTGTCAGACCCATCGCCCAACACTGATCCTGCTAA...CCTTGAATCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGTAGGGAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGTGGGACCACTGGCCCTaGGGAAGCTTGTGGACGCCA +
Preference number: 5 (lower is better)
Translates to: CSVLAELIWPRSGVANHMWDHWP*GSLWTP
Trigger: TGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCCA...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACTGGATCCGCCGGTGCTaGGTGAGCTCCGAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: YRTHVKATDCIEREHGFHWIRRC*VSSELL
Trigger: AAGGAGCTCGGAGCTCACCAAGCACCGGCGGATCCA...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTAGTGCCGAGCGCCTCTaGAACACGCGGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: INERARHGRVLLGKGARLSAERL*NTRPHW
Trigger: CCAGTGTGGCCGCGTGTTCAAGAGGCGCTCGGCACT...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGGCTCCCAGACCAAGTTaGGACCACTCCATTGATCTA +
Preference number: 5 (lower is better)
Translates to: VPLRASALLPSLRCGYRKAPRPS*DHSIDL
Trigger: TAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGC...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACACCAAGGAGATGTTTCTaGGGTGAATCTGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTPRRCF*GESAAQ
Trigger: CTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGG...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTGCTCCCAGACCAAGTTTGGACCACTCCATTGATCTAGGTGAGGCCAAGCCCAGAAGCCCTTCCAAGTaGTGTCTGCTAGGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LAPRPSLDHSIDLGEAKPRSPSK*CLLGSS
Trigger: AGAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCT...GGGCTTGGCCTCACCTAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS TCA 90 bp GGGTTCTTTCCATGCCAAGAGGAGTTGGGGGAGCTCATACTACTCTaGCATATCAGGTGTGGCAGACCCATTGTGTTTCCCCACAACCCA +
Preference number: 5 (lower is better)
Translates to: GFFPCQEELGELILL*HIRCGRPIVFPHNP
Trigger: TGGGTTGTGGGGAAACACAATGGGTCTGCCACACCTGATATGTCAGAGTAGTATGAGCTCCCCCAACTCCTCTTGGCATGGAAAGAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS CCA 90 bp GGAGCCAGGTTCCTTCTGGAAAACACACCACTGAAGCCTTTCTTCTaGAATTCAGTTGGCTGCTCTAGGAGCATCAGGTGTCATGCTGCG +
Preference number: 5 (lower is better)
Translates to: GARFLLENTPLKPFF*NSVGCSRSIRCHAA
Trigger: CGCAGCATGACACCTGATGCTCCTAGAGCAGCCAACTGAATTCCAGAAGAAAGGCTTCAGTGGTGTGTTTTCCAGAAGGAACCTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS-3UTR CAA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTTTAGCAGGATCAGTGTaGGGCGATGGGTCTGACACC +
Preference number: 5 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRALAGSV*GDGSDT
Trigger: GGTGTCAGACCCATCGCCCAACACTGATCCTGCTAA...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTCCCTGCTGCACGCCTaGCAGGCGAAAGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGSLLHA*QAKGFS
Trigger: GGAAAAGCCTTTCGCCTGCAAGGCGTGCAGCAGGGA...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAGGACACCCGTATGGCTaGGCCCCACTGTGGATGCGC +
Preference number: 5 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLGHPYG*APLWMR
Trigger: GCGCATCCACAGTGGGGCCAAGCCATACGGGTGTCC...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTGCTGCTGGCGGGGTCTATAATGATGAGCAGTCACAGAGTTCTGGCTAATCTATCTACTCGTGGTGGGTaGGCTGATGCTTCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LLLAGSIMMSSHRVLANLSTRGG*ADASAV
Trigger: CACTGCAGAAGCATCAGCCAACCCACCACGAGTAGA...TAGATTAGCCAGAACTCTGTGACTGCTCATCATTATAGACCCCGCCAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACGCCGCAGTGGTCAGGTaGGATAGTCAAGTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: YRTHVKATDCIEREHGFHAAVVR*DSQVVP
Trigger: GGGCACCACTTGACTATCCAACCTGACCACTGCGGC...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTATCTAGGCAAGTCTTCTaGTGTCCAAGGAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLSRQVF*CPRRCF
Trigger: GAAACATCTCCTTGGACACAAGAAGACTTGCCTAGA...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GACGGCAATAACTATGACAATGACAATGACAGCAGATGGCCTTCACTGAGTGTGCGAGCCTCTGCTCTGTaGCCCTCACTTAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: DGNNYDNDNDSRWPSLSVRASAL*PSLRCG
Trigger: GCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCG...CACACTCAGTGAAGGCCATCTGCTGTCATTGTCATTGTCATAGTTATTGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAAAGCCACAGACTGCATaGAAAGAGAACACGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTKPQTA*KENTGF
Trigger: GAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TCTTGGGGGAGCCCACTGGAAATGGTAGCTCAGACCCAGGAGGACCAGCTTCTAACAGAGAACACACGTTaGAACAGGTGTTCATGCAGT +
Preference number: 5 (lower is better)
Translates to: SWGSPLEMVAQTQEDQLLTENTR*NRCSCS
Trigger: ACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGT...TAGAAGCTGGTCCTCCTGGGTCTGAGCTACCATTTCCAGTGGGCTCCCCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS TCA 90 bp CATTCAATCACTTTCCTGGATGGAAACTCAGCTTCCCCACCTGGATaGTTGGAACTCCAAGCCCAGTGGACATCCAATCCTTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: HSITFLDGNSASPPG*LELQAQWTSNPWQP
Trigger: AGGCTGCCAAGGATTGGATGTCCACTGGGCTTGGAGTTCCAATCATCCAGGTGGGGAAGCTGAGTTTCCATCCAGGAAAGTGATTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS CCA 90 bp CCTCCATTCAATCACTTTCCTGGATGGAAACTCAGCTTCCCCACCTaGATGATTGGAACTCCAAGCCCAGTGGACATCCAATCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PPFNHFPGWKLSFPT*MIGTPSPVDIQSLA
Trigger: TGCCAAGGATTGGATGTCCACTGGGCTTGGAGTTCCAATCATCCAGGTGGGGAAGCTGAGTTTCCATCCAGGAAAGTGATTGAATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS-3UTR CAA 90 bp TTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTCACAATTTAGCAGGATCAGTGTaGGGCGATGGGTCTGACACC +
Preference number: 5 (lower is better)
Translates to: FGRGSDMKGHPCLLRAHNLAGSV*GDGSDT
Trigger: GGTGTCAGACCCATCGCCCAACACTGATCCTGCTAA...ATTGTGAGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGAGGTGGGTGTTGACTTaGAACGACCGCCCGCATTCC +
Preference number: 5 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGRWVLT*NDRPHS
Trigger: GGAATGCGGGCGGTCGTTCAAAGTCAACACCCACCT...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGTCTGATGGGCTGGGGTaGCAGCTTTTTGTTTGTAAT +
Preference number: 5 (lower is better)
Translates to: VPLRASALLPSLRCGYRKSDGLG*QLFVCN
Trigger: ATTACAAACAAAAAGCTGCAACCCCAGCCCATCAGA...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCACCAAGGAGATGTTTCTaGGGTGAATCTGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPPRRCF*GESAAQ
Trigger: CTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGG...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTAGCTCTGCCTCAGCCTaGGTGGGCCCACGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: KYISATKLFISFDSAIPSSSASA*VGPREG
Trigger: CCCTTCTCGTGGGCCCACCAAGGCTGAGGCAGAGCT...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGATTGCTTGCTGCCCTaGGGTCAGGTGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGDCLLP*GQVFSS
Trigger: AGAACTGAACACCTGACCCAAGGGCAGCAAGCAATC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGACAGAGAACACACGTTaGAACAGGTGTTCATGCAGT +
Preference number: 5 (lower is better)
Translates to: VPLRASALLPSLRCGYRKTENTR*NRCSCS
Trigger: ACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGT...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GGGTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAGATACGCAAATGACATaGAGGGCCAAGTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: GFLSEPLLCCPHLGVAIGDTQMT*RAKFKE
Trigger: CTCTTTAAACTTGGCCCTCAATGTCATTTGCGTATC...TCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS GCA 90 bp GTCTTCTCTCTGTCCACCCACTCAGAGCTCACACATTTAACTTCATaGTCTTCCCAGACACGTGGACTTCGACAGCTCCCAAATCTGACT +
Preference number: 5 (lower is better)
Translates to: VFSLSTHSELTHLTS*SSQTRGLRQLPNLT
Trigger: AGTCAGATTTGGGAGCTGTCGAAGTCCACGTGTCTGGGAAGAGCATGAAGTTAAATGTGTGAGCTCTGAGTGGGTGGACAGAGAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS-3UTR CAA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTATGGCCCTTGGGAAGCTaGTGGACGCCATCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLWPLGS*WTPSPV
Trigger: CACAGGAGATGGCGTCCACAAGCTTCCCAAGGGCCA...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTTGGGACCACTGGCCCTaGGGAAGCTTGTGGACGCCA +
Preference number: 5 (lower is better)
Translates to: KYISATKLFISFDSAIPSWDHWP*GSLWTP
Trigger: TGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCCA...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGAACAGAGAACACACGTTTGAACAGGTGTTCATGCAGTCAGGTGCGACTTGGCGCTCCCAGACCAAGTTaGGACCACTCCATTGATCTA +
Preference number: 5 (lower is better)
Translates to: RTENTRLNRCSCSQVRLGAPRPS*DHSIDL
Trigger: TAGATCAATGGAGTGGTCCAAACTTGGTCTGGGAGC...GCCAAGTCGCACCTGACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTCGGAAGAGGTGGGTGTaGACTTTGAACGACCGCCCG +
Preference number: 5 (lower is better)
Translates to: KYISATKLFISFDSAIPSRKRWV*TLNDRP
Trigger: CGGGCGGTCGTTCAAAGTCAACACCCACCTCTTCCG...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATCCCTGCTGCACGCCTaGCAGGCGAAAGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NDLGEITGHTLKPQTALKSLLHA*QAKGFS
Trigger: GGAAAAGCCTTTCGCCTGCAAGGCGTGCAGCAGGGA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGAACTGAAGATGGGAAAGAGTCAAGGACGGCAGGAAGGGATGCCAAGACACCATCTGATGGGCTGGGGTaGCAGCTTTTTGTTTGTAAT +
Preference number: 5 (lower is better)
Translates to: RTEDGKESRTAGRDAKTPSDGLG*QLFVCN
Trigger: ATTACAAACAAAAAGCTGCAACCCCAGCCCATCAGA...TGGTGTCTTGGCATCCCTTCCTGCCGTCCTTGACTCTTTCCCATCTTCAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GCTGTTCTGTCAACCTTGACGGCAAAGACCAGATCTTTAGTGTTAACTCTAAAAGCCGCAGTGGTCAGGTaGGATAGTCAAGTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: AVLSTLTAKTRSLVLTLKAAVVR*DSQVVP
Trigger: GGGCACCACTTGACTATCCAACCTGACCACTGCGGC...TTTTAGAGTTAACACTAAAGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATAATCCACTCGGAGCATaGCCAAGGCTCCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNNPLGA*PRLPGA
Trigger: AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATT...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CCAGTTCTAGGACAAAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCAATCCACTCGGAGCATaGCCAAGGCTCCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PVLGQNQAHGMQHHSKTCNPLGA*PRLPGA
Trigger: AGCTCCTGGGAGCCTTGGCAATGCTCCGAGTGGATT...GCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTTTGTCCTAGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTGCCCCTGGTAGAGGTTCTAGGCAAGTCTTCTaGTGTCCAAGGAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: RHGRVLLGKGARLAPGRGSRQVF*CPRRCF
Trigger: GAAACATCTCCTTGGACACAAGAAGACTTGCCTAGA...ACCTCTACCAGGGGCAAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GATAGTCAAGTGGTGCCCACAGATAGACAGGGAGTCCGCATCTCGGATGAGGAACTTCTGTTTCCTTGTTaGCATTTCAGATCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: DSQVVPTDRQGVRISDEELLFPC*HFRSGR
Trigger: CCTTCCAGATCTGAAATGCAAACAAGGAAACAGAAG...TTCCTCATCCGAGATGCGGACTCCCTGTCTATCTGTGGGCACCACTTGACTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAATATATAAGCGCTACAAAACTGTTCATCTCCTTTGACTCTGCCATCCCCTCTAGGTGGGTGTTGACTTaGAACGACCGCCCGCATTCC +
Preference number: 5 (lower is better)
Translates to: KYISATKLFISFDSAIPSRWVLT*NDRPHS
Trigger: GGAATGCGGGCGGTCGTTCAAAGTCAACACCCACCT...AGAGGGGATGGCAGAGTCAAAGGAGATGAACAGTTTTGTAGCGCTTATATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp ATCCCCAGTTCTGGAATTGACAAGCCACAGAATGACGGCAATAACTATGACAATTCTACTCGTGGTGGGTaGGCTGATGCTTCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: IPSSGIDKPQNDGNNYDNSTRGG*ADASAV
Trigger: CACTGCAGAAGCATCAGCCAACCCACCACGAGTAGA...ATTGTCATAGTTATTGCCGTCATTCTGTGGCTTGTCAATTCCAGAACTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GTTCCTCTCCGAGCCTCTGCTCTGTTGCCCTCACTTAGGTGTGGCTATAGGAAGATATCCGAAGGTAAGTaGATAACTAGTCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: VPLRASALLPSLRCGYRKISEGK*ITSQRR
Trigger: TCTCCTTTGACTAGTTATCAACTTACCTTCGGATAT...CTTCCTATAGCCACACCTAAGTGAGGGCAACAGAGCAGAGGCTCGGAGAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GGTGTTCATGCAGTCAGGTGCGACTTGGCCAGGAAGCAGCCAAGTGGCAAAACAATATCCGAAGGTAAGTaGATAACTAGTCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GVHAVRCDLARKQPSGKTISEGK*ITSQRR
Trigger: TCTCCTTTGACTAGTTATCAACTTACCTTCGGATAT...TGTTTTGCCACTTGGCTGCTTCCTGGCCAAGTCGCACCTGACTGCATGAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GCTAGATTTGGTAGGGGATCAGACATGAAAGGCCACCCCTGTCTTCTAAGAGCTTCTGATGGGCTGGGGTaGCAGCTTTTTGTTTGTAAT +
Preference number: 5 (lower is better)
Translates to: ARFGRGSDMKGHPCLLRASDGLG*QLFVCN
Trigger: ATTACAAACAAAAAGCTGCAACCCCAGCCCATCAGA...AGCTCTTAGAAGACAGGGGTGGCCTTTCATGTCTGATCCCCTACCAAATCTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAATCCTGGGCATGGCTGTaGCAAATCATAGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: NDLGEITGHTLKPQTALKSWAWL*QIIAQG
Trigger: GCCCTGGGCTATGATTTGCAACAGCCATGCCCAGGA...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAGTAAAGGTGCCAGACTaGCCCCTGGTAGAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLVKVPD*PLVEVN
Trigger: GTTGACCTCTACCAGGGGCAAGTCTGGCACCTTTAC...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGGCTGTTCTGTCAACCTaGACGGCAAAGACCAGATCT +
Preference number: 5 (lower is better)
Translates to: CSVLAELIWPRSGVANHMAVLST*TAKTRS
Trigger: AGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGACATGCCCGCTGCAATaGGGTAGGGACTATTCTGGA +
Preference number: 5 (lower is better)
Translates to: QTGVGHSYCSQRYANDIETCPLQ*GRDYSG
Trigger: TCCAGAATAGTCCCTACCCAATTGCAGCGGGCATGT...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGCTTCTGTTTCCTTGTTaGCATTTCAGATCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVLLFPC*HFRSGR
Trigger: CCTTCCAGATCTGAAATGCAAACAAGGAAACAGAAG...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTCAGGAAAGCTGGGATCACATTATGAGGACGCCATCGTGGAACAGCTCTGTGGAAGCTTCTGTTTCCTaGTTTGCATTTCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: LQESWDHIMRTPSWNSSVEASVS*FAFQIW
Trigger: CCAGATCTGAAATGCAAACAAGGAAACAGAAGCTTC...CACAGAGCTGTTCCACGATGGCGTCCTCATAATGTGATCCCAGCTTTCCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp GCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGTAGGGACGAAGCTTCTGTTTCCTaGTTTGCATTTCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: AHGMQHHSKTCPLQLGRDEASVS*FAFQIW
Trigger: CCAGATCTGAAATGCAAACAAGGAAACAGAAGCTTC...GTCCCTACCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AATGACAATGACAGCAGATGGCCTTCACTGAGTGTGTACCTCCATACCAGGCCGGATACGCAAATGACATaGAGGGCCAAGTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: NDNDSRWPSLSVYLHTRPDTQMT*RAKFKE
Trigger: CTCTTTAAACTTGGCCCTCAATGTCATTTGCGTATC...CGGCCTGGTATGGAGGTACACACTCAGTGAAGGCCATCTGCTGTCATTGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGACCCCACATCCAGATTaGTCCTCTCTCATTCTTGGA +
Preference number: 5 (lower is better)
Translates to: CSVLAELIWPRSGVANHMTPHPD*SSLILG
Trigger: TCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATACGCAAATGACATTGAGAGAAGCCCTTCCAAGTaGTGTCTGCTAGGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: QTGVGHSYCSQRYANDIERSPSK*CLLGSS
Trigger: AGAGCTTCCTAGCAGACACAACTTGGAAGGGCTTCT...CTCAATGTCATTTGCGTATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGAAGCCACAGACTGCATaGAAAGAGAACACGGGTTTC +
Preference number: 5 (lower is better)
Translates to: CSVLAELIWPRSGVANHMKPQTA*KENTGF
Trigger: GAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGATTGCTTGCTGCCCTaGGGTCAGGTGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDDCLLP*GQVFSS
Trigger: AGAACTGAACACCTGACCCAAGGGCAGCAAGCAATC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACTCTAGGCAAGTCTTCTaGTGTCCAAGGAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: YRTHVKATDCIEREHGFHSRQVF*CPRRCF
Trigger: GAAACATCTCCTTGGACACAAGAAGACTTGCCTAGA...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AACAACCAACGGAAATACAAACTGGGGTGGGACATAGCTATTGTTCTCAGAGATGCTGTTCTGTCAACCTaGACGGCAAAGACCAGATCT +
Preference number: 5 (lower is better)
Translates to: NNQRKYKLGWDIAIVLRDAVLST*TAKTRS
Trigger: AGATCTGGTCTTTGCCGTCAAGGTTGACAGAACAGC...ATCTCTGAGAACAATAGCTATGTCCCACCCCAGTTTGTATTTCCGTTGGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TGTTCAGTTCTGGCTGAATTAATATGGCCTAGAAGCGGGGTGGCAAATCACATGACAGAGAACACACGTTaGAACAGGTGTTCATGCAGT +
Preference number: 5 (lower is better)
Translates to: CSVLAELIWPRSGVANHMTENTR*NRCSCS
Trigger: ACTGCATGAACACCTGTTCAAACGTGTGTTCTCTGT...CATGTGATTTGCCACCCCGCTTCTAGGCCATATTAATTCAGCCAGAACTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAACCCCACATCCAGATTaGTCCTCTCTCATTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLTPHPD*SSLILG
Trigger: TCCAAGAATGAGAGAGGACAAATCTGGATGTGGGGT...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AATGATCTTGGCGAAATTACAGGACACACGTTAAAGCCACAGACTGCATTGAAACCAAGGAGATGTTTCTaGGGTGAATCTGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: NDLGEITGHTLKPQTALKPRRCF*GESAAQ
Trigger: CTGAGCAGCAGATTCACCCAAGAAACATCTCCTTGG...TTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTAATTTCGCCAAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAAAGCCACAGACTGCATaGAAAGAGAACACGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLKPQTA*KENTGF
Trigger: GAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTT...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp TACAGGACACACGTTAAAGCCACAGACTGCATTGAAAGAGAACACGGGTTTCACGATACGCAAATGACATaGAGGGCCAAGTTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: YRTHVKATDCIEREHGFHDTQMT*RAKFKE
Trigger: CTCTTTAAACTTGGCCCTCAATGTCATTTGCGTATC...GTGAAACCCGTGTTCTCTTTCAATGCAGTCTGTGGCTTTAACGTGTGTCCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp ATAAATGAACGGGCAAGACATGGCAGAGTACTTCTAGGTAAAGGTGCCAGACTTCTTCTGTTTCCTTGTTaGCATTTCAGATCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: INERARHGRVLLGKGARLLLFPC*HFRSGR
Trigger: CCTTCCAGATCTGAAATGCAAACAAGGAAACAGAAG...AAGTCTGGCACCTTTACCTAGAAGTACTCTGCCATGTCTTGCCCGTTCATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp AAATCAAGCACATGGAATGCAACACCACTCAAAAACATGCCCGCTGCAATTGGGATATCCGAAGGTAAGTaGATAACTAGTCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: KSSTWNATPLKNMPAAIGISEGK*ITSQRR
Trigger: TCTCCTTTGACTAGTTATCAACTTACCTTCGGATAT...CCCAATTGCAGCGGGCATGTTTTTGAGTGGTGTTGCATTCCATGTGCTTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS-3UTR CAA 90 bp CTTGGATTCAAGGCATGTGGACTGAAATACCTTGATGGTACTTCCTACCAGTTAGAAGCTTCTGTTTCCTaGTTTGCATTTCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: LGFKACGLKYLDGTSYQLEASVS*FAFQIW
Trigger: CCAGATCTGAAATGCAAACAAGGAAACAGAAGCTTC...TAACTGGTAGGAAGTACCATCAAGGTATTTCAGTCCACATGCCTTGAATCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000650114.2
CDS CCA 72 bp CTCATCATGCCTCAGAACTACTCCAAGGGATCAGCCTaGCAGGTAAGGCCCCATCCAGGCCCGGCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: LIMPQNYSKGSA*QVRPHPGPAAA
Trigger: GGCCGCCGCCGGGCCTGGATGGGGCCTTACCTGCCAGGCTGATCCCTTGGAGTAGTTCTGAGGCATGATGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370251.3
ENST00000650114.2
CDS CCA 72 bp GCCCTTGGGAAGCTTGTGGACGCCATCTCCTGTGGCTaGGCATCTTCCCCCTTCATCTGGTGTCGGGTCGCG +
Preference number: 6 (lower is better)
Translates to: ALGKLVDAISCG*ASSPFIWCRVA
Trigger: CGCGACCCGACACCAGATGAAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS TCA 72 bp GGCTCCCTCTCTTCCCGTCAGAGTCCCCGTGCTGTCTaGATTCAGGACTGGGACCACTGGCCCTTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: GSLSSRQSPRAV*IQDWDHWPLGS
Trigger: GCTTCCCAAGGGCCAGTGGTCCCAGTCCTGAATTCAGACAGCACGGGGACTCTGACGGGAAGAGAGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS GCA 72 bp CAGTCGAAGGGCAGGTGGCCAGTGTGCATGCGCTGGTaGTTGAGAAGCTCCTGGCGATCCAGGAAATCCCTG +
Preference number: 6 (lower is better)
Translates to: QSKGRWPVCMRW*LRSSWRSRKSL
Trigger: CAGGGATTTCCTGGATCGCCAGGAGCTTCTCAAGCACCAGCGCATGCACACTGGCCACCTGCCCTTCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS GCA 72 bp CAGGTGTCATGCTGCGGCCAGCAGGAAGTGGGTAAGTaGCCAATACAGGGACCCCAGGAGTCTGCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: QVSCCGQQEVGK*PIQGPQESALG
Trigger: GCCCAAAGCAGACTCCTGGGGTCCCTGTATTGGGCACTTACCCACTTCCTGCTGGCCGCAGCATGACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CCA 72 bp ACTGGCCCTTGGGAAGCTTGTGGACGCCATCTCCTGTaGCTGGGCATCTTCCCCCTTCATCTGGTGTCGGGT +
Preference number: 6 (lower is better)
Translates to: TGPWEACGRHLL*LGIFPLHLVSG
Trigger: ACCCGACACCAGATGAAGGGGGAAGATGCCCAGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 72 bp GTGCTGTCTGAATTCAGGACTGGGACCACTGGCCCTTaGGAAGCTTGTGGACGCCATCTCCTGTGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: VLSEFRTGTTGP*EACGRHLLWLG
Trigger: GCCCAGCCACAGGAGATGGCGTCCACAAGCTTCCCAAGGGCCAGTGGTCCCAGTCCTGAATTCAGACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CAA 72 bp CCACCAGACTGGGAAGCAACATCCTGGGCTCCAGAGTaGGCCACTCATCATGGCCAGGCCTTCCTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PPDWEATSWAPE*ATHHGQAFLPA
Trigger: TGCTGGGAGGAAGGCCTGGCCATGATGAGTGGCCAACTCTGGAGCCCAGGATGTTGCTTCCCAGTCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CCA 72 bp AGGAGCATCAGGTGTCATGCTGCGGCCAGCAGGAAGTaGGTAAGTGCCCAATACAGGGACCCCAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: RSIRCHAAASRK*VSAQYRDPRSL
Trigger: CAGACTCCTGGGGTCCCTGTATTGGGCACTTACCCACTTCCTGCTGGCCGCAGCATGACACCTGATGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CAA 90 bp CAGGAAGTGGGTAAGTGCCCAATACAGGGACCCCAGGAGTCTGCTTaGGGCACCAGAGGGCCAGCTCAGATTGTGGAGGATTCACCACCA +
Preference number: 6 (lower is better)
Translates to: QEVGKCPIQGPQESA*GTRGPAQIVEDSPP
Trigger: TGGTGGTGAATCCTCCACAATCTGAGCTGGCCCTCTGGTGCCCAAAGCAGACTCCTGGGGTCCCTGTATTGGGCACTTACCCACTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CCA 72 bp GCCATCTCCTGTGGCTGGGCATCTTCCCCCTTCATCTaGTGTCGGGTCGCGGAGGTGCTTTCAGAGTACTTA +
Preference number: 6 (lower is better)
Translates to: AISCGWASSPFI*CRVAEVLSEYL
Trigger: TAAGTACTCTGAAAGCACCTCCGCGACCCGACACCAGATGAAGGGGGAAGATGCCCAGCCACAGGAGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CCA 72 bp GGGCCAGCTCAGATTGTGGAGGATTCACCACCAGACTaGGAAGCAACATCCTGGGCTCCAGAGTTGGCCACT +
Preference number: 6 (lower is better)
Translates to: GPAQIVEDSPPD*EATSWAPELAT
Trigger: AGTGGCCAACTCTGGAGCCCAGGATGTTGCTTCCCAGTCTGGTGGTGAATCCTCCACAATCTGAGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS CAA 72 bp GGTAAGTGCCCAATACAGGGACCCCAGGAGTCTGCTTaGGGCACCAGAGGGCCAGCTCAGATTGTGGAGGAT +
Preference number: 6 (lower is better)
Translates to: GKCPIQGPQESA*GTRGPAQIVED
Trigger: ATCCTCCACAATCTGAGCTGGCCCTCTGGTGCCCAAAGCAGACTCCTGGGGTCCCTGTATTGGGCACTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS TCA 72 bp CTTGGGGAGGCTCTGTGGAGTATCAAGTGGCCACCCTaGGGAGGTGATCTTCACCCTGTCTTCTCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LGEALWSIKWPP*GGDLHPVFSLS
Trigger: GGACAGAGAGAAGACAGGGTGAAGATCACCTCCTCAGGGTGGCCACTTGATACTCCACAGAGCCTCCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS TCA 72 bp CTTCCCAGACACGTGGACTTCGACAGCTCCCAAATCTaGCTCCCAACGTCTCTCCTCCTAAAACCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPRHVDFDSSQI*LPTSLLLKPPP
Trigger: GGGAGGAGGTTTTAGGAGGAGAGACGTTGGGAGTCAGATTTGGGAGCTGTCGAAGTCCACGTGTCTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS GCA 72 bp GCTCCTGGCGATCCAGGAAATCCCTGCTGCACGCCTTaGAGGCGAAAGGCTTTTCCGAAGTGTGAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: APGDPGNPCCTP*RRKAFPKCEVS
Trigger: AGAAACTTCACACTTCGGAAAAGCCTTTCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGGATCGCCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS CAA 72 bp GCGGAGGTGCTTTCAGAGTACTTAGCAGGATCAGTGTaGGGCGATGGGTCTGACACCAGTAGCACTTGTCCT +
Preference number: 6 (lower is better)
Translates to: AEVLSEYLAGSV*GDGSDTSSTCP
Trigger: AGGACAAGTGCTACTGGTGTCAGACCCATCGCCCAACACTGATCCTGCTAAGTACTCTGAAAGCACCTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370249.3
ENST00000370251.3
ENST00000647705.1
ENST00000650114.2
CDS TCA 72 bp CTAACCACAGCTCCAAGAAGTCCTGAAAAGAGAACCTaGTCAAGCACTAGGATCCCTGGGCCATGGACCTGG +
Preference number: 6 (lower is better)
Translates to: LTTAPRSPEKRT*SSTRIPGPWTW
Trigger: CCAGGTCCATGGCCCAGGGATCCTAGTGCTTGATCAGGTTCTCTTTTCAGGACTTCTTGGAGCTGTGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS TCA 72 bp CCATGCCAAGAGGAGTTGGGGGAGCTCATACTACTCTaGCATATCAGGTGTGGCAGACCCATTGTGTTTCCC +
Preference number: 6 (lower is better)
Translates to: PCQEELGELILL*HIRCGRPIVFP
Trigger: GGGAAACACAATGGGTCTGCCACACCTGATATGTCAGAGTAGTATGAGCTCCCCCAACTCCTCTTGGCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS TCA 72 bp ACTTTCCTGGATGGAAACTCAGCTTCCCCACCTGGATaGTTGGAACTCCAAGCCCAGTGGACATCCAATCCT +
Preference number: 6 (lower is better)
Translates to: TFLDGNSASPPG*LELQAQWTSNP
Trigger: AGGATTGGATGTCCACTGGGCTTGGAGTTCCAATCATCCAGGTGGGGAAGCTGAGTTTCCATCCAGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS TCA 72 bp GACATGAGAATAGTGGAGGAACATAGGCAAGGCCTTTaGAGGGGAACCCCCTTCAATCTTCAAAGACCAGGC +
Preference number: 6 (lower is better)
Translates to: DMRIVEEHRQGL*RGTPFNLQRPG
Trigger: GCCTGGTCTTTGAAGATTGAAGGGGGTTCCCCTTCAAAGGCCTTGCCTATGTTCCTCCACTATTCTCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS TCA 72 bp AGTGGCAGTGTTCTAATTTCTTTCCCAGTAAAAGACTaGGAGGGGTTCTTTCCATGCCAAGAGGAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: SGSVLISFPVKD*EGFFPCQEELG
Trigger: CCCCAACTCCTCTTGGCATGGAAAGAACCCCTCTCAGTCTTTTACTGGGAAAGAAATTAGAACACTGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647705.1
CDS CCA 72 bp TTCCTTCTGGAAAACACACCACTGAAGCCTTTCTTCTaGAATTCAGTTGGCTGCTCTAGGAGCATCAGGTGT +
Preference number: 6 (lower is better)
Translates to: FLLENTPLKPFF*NSVGCSRSIRC
Trigger: ACACCTGATGCTCCTAGAGCAGCCAACTGAATTCCAGAAGAAAGGCTTCAGTGGTGTGTTTTCCAGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438239.1
CDS TCA 72 bp TTTAAAACAGGAACGCCCAAAAGAGACACACACGGATaGCTCATCATGCCTCAGAACTACTCCAAGGGATCA +
Preference number: 6 (lower is better)
Translates to: FKTGTPKRDTHG*LIMPQNYSKGS
Trigger: TGATCCCTTGGAGTAGTTCTGAGGCATGATGAGTCATCCGTGTGTGTCTCTTTTGGGCGTTCCTGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370251.3
ENST00000650114.2
CDS CAA 90 bp TGCTATAGATGCTGGAAGTTTTCAGTAGTTAAGGGCAAAGAGTTTTaGAGATTTGACCCAACTGTTAATCCTAGGAGCCAGGTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: CYRCWKFSVVKGKEF*RFDPTVNPRSQVPS
Trigger: AGAAGGAACCTGGCTCCTAGGATTAACAGTTGGGTCAAATCTCAAAAACTCTTTGCCCTTAACTACTGAAAACTTCCAGCATCTATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438239.1