RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF268 (Homo sapiens)

Ensembl gene IDs: ENSG00000090612

Ensembl transcript IDs: ENST00000228289.9, ENST00000416488.5, ENST00000500625.7, ENST00000534953.1, ENST00000536435.7, ENST00000536899.6, ENST00000537973.5, ENST00000539248.6, ENST00000541009.6, ENST00000541211.6, ENST00000541975.2, ENST00000542711.6, ENST00000542986.6, ENST00000546126.7, ENST00000585488.1, ENST00000588312.2, ENST00000591951.1, ENST00000592241.5, ENST00000611984.4

Found 691 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGCCTGCTTGCAGTACCTGCATTCTGCTCACAGACCTCTGGGTTaGATCCACAGAGGACCAGGCCTTCCTTCTACTCAGGACCTGGGG +
Preference number: 1 (lower is better)
Translates to: LACLQYLHSAHRPLG*IHRGPGLPSTQDLG
Trigger: CCCCAGGTCCTGAGTAGAAGGAAGGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACTGCAAGCAGGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 90 bp GTGCAAGCACACACCTTGTCTAGCCTGCTTGCAGTACCTGCATTCTaGTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCTTCC +
Preference number: 1 (lower is better)
Translates to: VQAHTLSSLLAVPAF*SQTSGLNPQRTRPS
Trigger: GGAAGGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACTGCAAGCAGGCTAGACAAGGTGTGTGCTTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 90 bp AACACTGCGACAAAACACTGCAACAGTCCAGGTCAAAGTTGGGGATaGACAGCACCTGTGGGATCACCCTGGATCCCAAGAGGGAAGGGC +
Preference number: 1 (lower is better)
Translates to: NTATKHCNSPGQSWG*TAPVGSPWIPRGKG
Trigger: GCCCTTCCCTCTTGGGATCCAGGGTGATCCCACAGGTGCTGTTCATCCCCAACTTTGACCTGGACTGTTGCAGTGTTTTGTCGCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 90 bp CCATATCTGAAGACTCCTGTAGGGTACACCCACAGTGACGACCAGTaGACTTTCCGGACCAATCTGGGGCGATGTCATCTCACCTTTGGG +
Preference number: 1 (lower is better)
Translates to: PYLKTPVGYTHSDDQ*TFRTNLGRCHLTFG
Trigger: CCCAAAGGTGAGATGACATCGCCCCAGATTGGTCCGGAAAGTGCACTGGTCGTCACTGTGGGTGTACCCTACAGGAGTCTTCAGATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 90 bp TCCAGAGCTTCCATATCTGAAGACTCCTGTAGGGTACACCCACAGTaGCGACCAGTGCACTTTCCGGACCAATCTGGGGCGATGTCATCT +
Preference number: 1 (lower is better)
Translates to: SRASISEDSCRVHPQ*RPVHFPDQSGAMSS
Trigger: AGATGACATCGCCCCAGATTGGTCCGGAAAGTGCACTGGTCGTCACTGTGGGTGTACCCTACAGGAGTCTTCAGATATGGAAGCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 90 bp CAGGAGTCCCTTGGCCCAAGATGGATTCCTGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGTTTCGTTCTTGGAGAGGTGGGACCT +
Preference number: 1 (lower is better)
Translates to: QESLGPRWIPDLGAF*SYPMNCFVLGEVGP
Trigger: AGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAGGGACTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR TCA 90 bp GGGAGAGGTTGCAGACCAGGAGTCCCTTGGCCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATCCTATCCCATGAACTGTTTCGTTCT +
Preference number: 1 (lower is better)
Translates to: GRGCRPGVPWPKMDS*PWSFLILSHELFRS
Trigger: AGAACGAAACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTGCAACCTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR GCA 90 bp GCACATGGCCATCACAAAACAGGAAGCACTGACCATCCAACACTGTaGCTAGGTAGTAAGGAAGGGGTGCAAGCACACACCTTGTCTAGC +
Preference number: 1 (lower is better)
Translates to: AHGHHKTGSTDHPTL*LGSKEGVQAHTLSS
Trigger: GCTAGACAAGGTGTGTGCTTGCACCCCTTCCTTACTACCTAGGCACAGTGTTGGATGGTCAGTGCTTCCTGTTTTGTGATGGCCATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 90 bp GAAATAAACAGCCACTCTAGGACTTTCTCTATTCTGCGACTCTTCTaGTTCTGCCTGGGTGTTCCAGGGAGAGGTTGCAGACCAGGAGTC +
Preference number: 1 (lower is better)
Translates to: EINSHSRTFSILRLF*FCLGVPGRGCRPGV
Trigger: GACTCCTGGTCTGCAACCTCTCCCTGGAACACCCAGGCAGAAGCAGAAGAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR GCA 90 bp GGTCTCTTTCACTTAGCAATATGCCTATCAGATTCATCCATGTCCTaGATGGCCTCAGAGCTTGCTCTTGCTGAACAGGACTCCATTGCA +
Preference number: 1 (lower is better)
Translates to: GLFHLAICLSDSSMS*MASELALAEQDSIA
Trigger: TGCAATGGAGTCCTGTTCAGCAAGAGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAAGTGAAAGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CCA 90 bp TGCATGGCCTCAGAGCTTGCTCTTGCTGAACAGGACTCCATTGCATaGATGTACCCCAGCCTAGTTAGTCATTCACCTATTGAAGGTTAT +
Preference number: 1 (lower is better)
Translates to: CMASELALAEQDSIA*MYPSLVSHSPIEGY
Trigger: ATAACCTTCAATAGGTGAATGACTAACTAGGCTGGGGTACATCCATGCAATGGAGTCCTGTTCAGCAAGAGCAAGCTCTGAGGCCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 90 bp AGGATCATACAGCCTTTTCACACTGGTCTCTTTCACTTAGCAATATaGCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCT +
Preference number: 1 (lower is better)
Translates to: RIIQPFHTGLFHLAI*LSDSSMSCMASELA
Trigger: AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAAGTGAAAGAGACCAGTGTGAAAAGGCTGTATGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CCA 90 bp ATGAATGACAAAGGTCCCCAGGACTTGGTGATTTTTGGCTGCTCTTaGGAAATAAACAGCCACTCTAGGACTTTCTCTATTCTGCGACTC +
Preference number: 1 (lower is better)
Translates to: MNDKGPQDLVIFGCS*EINSHSRTFSILRL
Trigger: GAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATCACCAAGTCCTGGGGACCTTTGTCATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR CCA 90 bp TTTCCCACAGTATGTGAGTGCTGTCCTCAATACTGTCAACACTTCTaGCTTCTACCAGGCAAGGCTGCATGTAGATTTGCATCTGAAAAA +
Preference number: 1 (lower is better)
Translates to: FPTVCECCPQYCQHF*LLPGKAACRFASEK
Trigger: TTTTTCAGATGCAAATCTACATGCAGCCTTGCCTGGTAGAAGCCAGAAGTGTTGACAGTATTGAGGACAGCACTCACATACTGTGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 90 bp TGCAAGTTTCTGCCTACTCCTCTACCACCCATTTCTGAAGCCATCTaGTTTAGTAAGCTGTATGCAAAAGATACACAATGGCTAATGCAA +
Preference number: 1 (lower is better)
Translates to: CKFLPTPLPPISEAI*FSKLYAKDTQWLMQ
Trigger: TTGCATTAGCCATTGTGTATCTTTTGCATACAGCTTACTAAATCAGATGGCTTCAGAAATGGGTGGTAGAGGAGTAGGCAGAAACTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 90 bp ATAATAAGTCCTAATCAAGTATTATTCTTTCCCACAGTATGTGAGTaGTGTCCTCAATACTGTCAACACTTCTGGCTTCTACCAGGCAAG +
Preference number: 1 (lower is better)
Translates to: IISPNQVLFFPTVCE*CPQYCQHFWLLPGK
Trigger: CTTGCCTGGTAGAAGCCAGAAGTGTTGACAGTATTGAGGACAGCACTCACATACTGTGGGAAAGAATAATACTTGATTAGGACTTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTaGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCAGATTCA +
Preference number: 1 (lower is better)
Translates to: SQQLHPKGFSPIYIC*HISCDFLLTVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR CCA 90 bp AATATGCTCTCTTTGGATTTACCCATTCTGGGTATTTCATATAAGTaGTATCATACAGTATGTGACCTTTTTGTGGCCAGCCTCTTTCTG +
Preference number: 1 (lower is better)
Translates to: NMLSLDLPILGISYK*YHTVCDLFVASLFL
Trigger: CAGAAAGAGGCTGGCCACAAAAAGGTCACATACTGTATGATACCACTTATATGAAATACCCAGAATGGGTAAATCCAAAGAGAGCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CCA 90 bp AACTGCATACTTGCTACTCTACTGGCAGTTCCAAACATTTGTTTGTaGTTTATTTTGGGTTTCCTAATTACACGATCACATCTCCAATTC +
Preference number: 1 (lower is better)
Translates to: NCILATLLAVPNICL*FILGFLITRSHLQF
Trigger: GAATTGGAGATGTGATCGTGTAATTAGGAAACCCAAAATAAACCACAAACAAATGTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 90 bp CAAACTCCTATGTTTTCAAAGCAGTTATCTAAATACCTAGGAGTGTaGTTGTTGGCTCATATTGTGAAGCTTTGTTTAGCTTTGGGGAAA +
Preference number: 1 (lower is better)
Translates to: QTPMFSKQLSKYLGV*LLAHIVKLCLALGK
Trigger: TTTCCCCAAAGCTAAACAAAGCTTCACAATATGAGCCAACAATCACACTCCTAGGTATTTAGATAACTGCTTTGAAAACATAGGAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAAGGAAAAGTGAGGCCTaGACCCTGAGTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: PIWGDVISPLGYMEATGGRKSEA*TLSAEE
Trigger: CTCCTCAGCACTCAGGGTGCAGGCCTCACTTTTCCT...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGACCAACCTGGGGGATaGATCACACTGAGAACCAGA +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQADQPGG*ITLRTR
Trigger: TCTGGTTCTCAGTGTGATGCATCCCCCAGGTTGGTC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp AGGGAGAAACACTGCGACAAAACACTGCAACAGTCCAGGTCAAAGTaGGGGATGAACAGCACCTGTGGGATCACCCTGGATCCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: REKHCDKTLQQSRSK*GMNSTCGITLDPKR
Trigger: CCTCTTGGGATCCAGGGTGATCCCACAGGTGCTGTTCATCCCCAACTTTGACCTGGACTGTTGCAGTGTTTTGTCGCAGTGTTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp CCAACACTGTGCCTAGGTAGTAAGGAAGGGGTGCAAGCACACACCTaGTCTAGCCTGCTTGCAGTACCTGCATTCTGCTCACAGACCTCT +
Preference number: 2 (lower is better)
Translates to: PTLCLGSKEGVQAHT*SSLLAVPAFCSQTS
Trigger: AGAGGTCTGTGAGCAGAATGCAGGTACTGCAAGCAGGCTAGACAAGGTGTGTGCTTGCACCCCTTCCTTACTACCTAGGCACAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAACCATCTCAGCCTCCTaGAGTGCTGGGATTATAGGT +
Preference number: 2 (lower is better)
Translates to: PIWGDVISPLGYMEATGGTISAS*SAGIIG
Trigger: ACCTATAATCCCAGCACTTCAGGAGGCTGAGATGGT...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCACAGGAGGAAAAGATaGGGAAAAGTGAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQAHRRKR*GKVRPA
Trigger: TGCAGGCCTCACTTTTCCTCATCTTTTCCTCCTGTG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATCGCCCAGCCTGGAGTaGAGTGGTGCAATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKSPSLE*SGAILA
Trigger: AGCCAAGATTGCACCACTGCACTCCAGGCTGGGCGA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGGGATCACTAGAGGCTaGATCACAGTAAAGACTGAG +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQAGITRG*ITVKTE
Trigger: CTCAGTCTTTACTGTGATGCAGCCTCTAGTGATCCC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAAGGGTCTCCCTATATTaGTCAGGCTTGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: PIWGDVISPLGYMEATGGRVSLY*SGLSRT
Trigger: AGTTCGAGACAAGCCTGACCAATATAGGGAGACCCT...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp CCTCAGCTGACCATAGTGCTCATGCCAAGTCCTGAGCAGGGCATCTaGAATGGTGGTTCCCTCATGACTACATACACCGTTAGGGAATGT +
Preference number: 2 (lower is better)
Translates to: PQLTIVLMPSPEQGI*NGGSLMTTYTVREC
Trigger: ACATTCCCTAACGGTGTATGTAGTCATGAGGGAACCACCATTCAAGATGCCCTGCTCAGGACTTGGCATGAGCACTATGGTCAGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp CAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTaGCTCTTGCTGAACAGGACTCCATTGCATGGATGTACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QYAYQIHPCPAWPQS*LLLNRTPLHGCTPA
Trigger: GGCTGGGGTACATCCATGCAATGGAGTCCTGTTCAGCAAGAGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTAATCCTGACCTCAAGTaGTCTGCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELANPDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACTTGAGGTCAGGATT...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCACTGCGACAAAACACTaGAACAGTCCAGGTCAAAGT +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQATATKH*NSPGQS
Trigger: ACTTTGACCTGGACTGTTGCAGTGTTTTGTCGCAGT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGGGCATCTTGAATGGTaGTTCCCTCATGACTACATA +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQAGHLEW*FPHDYI
Trigger: TATGTAGTCATGAGGGAACCACCATTCAAGATGCCC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACACATCTCCAATTCATaGCAGTTGTTTCTGCACCCA +
Preference number: 2 (lower is better)
Translates to: PIWGDVISPLGYMEATGGHISNS*QLFLHP
Trigger: TGGGTGCAGAAACAACTGCCATGAATTGGAGATGTG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCTTTAAGATTTATGGCTaGGTGCTTGGCTCACACCTG +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQAFKIYG*VLGSHL
Trigger: CAGGTGTGAGCCAAGCACCCAGCCATAAATCTTAAA...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGCTCATGCCAAGTCCTaGGCAGGGCATCTTGAATGG +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAAHAKS*AGHLEW
Trigger: CCATTCAAGATGCCCTGCTCAGGACTTGGCATGAGC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAAAGATGAGGAAAAGTaGGGCCTGCACCCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKKDEEK*GLHPEC
Trigger: GCACTCAGGGTGCAGGCCTCACTTTTCCTCATCTTT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGTTTCTCTTCAGGACTaGCCTAGGGACCCTAGTGGG +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAVSLQD*PRDPSG
Trigger: CCCACTAGGGTCCCTAGGTCAGTCCTGAAGAGAAAC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATTGCCCAGGATGGAGTaGAGGGGCATGATCATAGCT +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKLPRME*RGMIIA
Trigger: AGCTATGATCATGCCCCTGCACTCCATCCTGGGCAA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGGTTCCAGGGAGAGGTTaGAGACCAGGAGTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWVPGRG*RPGVPW
Trigger: CCAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAAC...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR GCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCACAGTGACGACCAGTaGACTTTCCGGACCAATCTG +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAHSDDQ*TFRTNL
Trigger: CAGATTGGTCCGGAAAGTGCACTGGTCGTCACTGTG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGATTCATCCATGTCCTaGATGGCCTCAGAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKDSSMS*MASELA
Trigger: AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCACTTCCATCCTGTCTTaGGAAACAACCATTTCCAAA +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQATSILS*ETTISK
Trigger: TTTGGAAATGGTTGTTTCCCAAGACAGGATGGAAGT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGATCTCCATGTTATACATaGGTATCAAAAGCATTCCCC +
Preference number: 2 (lower is better)
Translates to: PIWGDVISPLGYMEATGGSPCYT*VSKAFP
Trigger: GGGGAATGCTTTTGATACCCATGTATAACATGGAGA...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCTGCTCACAGACCTCTaGGTTGAATCCACAGAGGAC +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELALLTDL*VESTED
Trigger: GTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp CCATCCATTAAGCAGCTGTCACACATTTCATCCTCCCTCCGACCCTaGACAACCACCAATATGCTCTCTTTGGATTTACCCATTCTGGGT +
Preference number: 2 (lower is better)
Translates to: PSIKQLSHISSSLRP*TTTNMLSLDLPILG
Trigger: ACCCAGAATGGGTAAATCCAAAGAGAGCATATTGGTGGTTGTCAAGGGTCGGAGGGAGGATGAAATGTGTGACAGCTGCTTAATGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTATGGTGGTTCCCTCATaGCTACATACACCGTTAGGG +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAMVVPS*LHTPLG
Trigger: CCCTAACGGTGTATGTAGTCATGAGGGAACCACCAT...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTAGCACTTTGGGAGGCTaGGGGTGGATCACGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFSTLGG*GWITRS
Trigger: TGACCTCGTGATCCACCCTCAGCCTCCCAAAGTGCT...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGGCAGGTGGACTGCTTaGGCCCAGGAGTTTGAAACC +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFGRWTA*AQEFET
Trigger: GGTTTCAAACTCCTGGGCTCAAGCAGTCCACCTGCC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCAAAACAGGAAGCACTaGCCATCCAACACTGTGCCT +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAQNRKH*PSNTVP
Trigger: AGGCACAGTGTTGGATGGTCAGTGCTTCCTGTTTTG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCTGAGGAGGGAGCTTTaGTGTTTCACTTTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELALRREL*CFTLPC
Trigger: ACAGGGCAAAGTGAAACAGCAAAGCTCCCTCCTCAG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGATTACAACGTTTAACATaGTTCCTCACCTGTATGAAC +
Preference number: 2 (lower is better)
Translates to: PIWGDVISPLGYMEATGGLQRLT*FLTCMN
Trigger: GTTCATACAGGTGAGGAACCATGTTAAACGTTGTAA...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGCAGGGCATCTTGAATaGTGGTTCCCTCATGACTAC +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAAGHLE*WFPHDY
Trigger: GTAGTCATGAGGGAACCACCATTCAAGATGCCCTGC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCTTGTTTTCACACCTTaGCTAGATGTTACTCATTTC +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQALVFTP*LDVTHF
Trigger: GAAATGAGTAACATCTAGCCAAGGTGTGAAAACAAG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCAGGACTCCATTGCATaGATGTACCCCAGCCTAGTT +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAQDSIA*MYPSLV
Trigger: AACTAGGCTGGGGTACATCCATGCAATGGAGTCCTG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTAGGCAGAGGTTGCAGTaGGCCAAGAACACACCACTG +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFRQRLQ*AKNTPL
Trigger: CAGTGGTGTGTTCTTGGCTCACTGCAACCTCTGCCT...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACCCACAGTATGTGAGTaGTGTCCTCAATACTGTCAA +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKPTVCE*CPQYCQ
Trigger: TTGACAGTATTGAGGACAGCACTCACATACTGTGGG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCTTAACAGTCCAGCTGTaGTTTATTTGGTACATTCAT +
Preference number: 2 (lower is better)
Translates to: STCILLTDLWVESTEDQALTVQL*FIWYIH
Trigger: ATGAATGTACCAAATAAACCACAGCTGGACTGTTAA...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTTACTGTCAACACTTCTaGCTTCTACCAGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAYCQHF*LLPGKA
Trigger: AGCCTTGCCTGGTAGAAGCCAGAAGTGTTGACAGTA...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCACCTTTGGGATACATaGAGGCCACAGGAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEHLWDT*RPQEEK
Trigger: CTTTTCCTCCTGTGGCCTCCATGTATCCCAAAGGTG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTTTGAGCCCAGGAGTTTaGAACCAGACTGGAAAACAT +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELALSPGV*NQTGKH
Trigger: ATGTTTTCCAGTCTGGTTTCAAACTCCTGGGCTCAA...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGGTCAAAGTTGGGGATaGACAGCACCTGTGGGATCA +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFGQSWG*TAPVGS
Trigger: TGATCCCACAGGTGCTGTTCATCCCCAACTTTGACC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATCCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATC +
Preference number: 2 (lower is better)
Translates to: LHPKGFSPIYICWHISCDPKMDS*PWSFLI
Trigger: GATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGG...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCTCAGCCTTCCCAAGTaGTGGTATTACATGGATGAG +
Preference number: 2 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQELSLPK*WYYMDE
Trigger: CTCATCCATGTAATACCAGCACTTGGGAAGGCTGAG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTACAATCTCAGCTCACTaGAACCTCCGCCTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFTISAH*NLRLSS
Trigger: ACTGGAGAGGCGGAGGTTGCAGTGAGCTGAGATTGT...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTCTTGTCTCGAACTCCTaGGTTCCAGCAATCCTCCAG +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFLVSNS*VPAILQ
Trigger: CTGGAGGATTGCTGGAACCCAGGAGTTCGAGACAAG...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGATGAACAGCACCTGTaGGATCACCCTGGATCCCAA +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFDEQHL*DHPGSQ
Trigger: TTGGGATCCAGGGTGATCCCACAGGTGCTGTTCATC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAGAAAACTAACTTTGTaGGTAAGCAACTGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKRKLTL*VSNWQS
Trigger: ACTCTGCCAGTTGCTTACTCACAAAGTTAGTTTTCT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGTCCCTTCCCTTCTGTaGATCATCATTCTTCACCCC +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFVPSLL*IIILHP
Trigger: GGGGTGAAGAATGATGATTCACAGAAGGGAAGGGAC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAGTATTTGTCTGTTATaGAAAGAGCTGCTGTACGTG +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKSICLL*KELLYV
Trigger: CACGTACAGCAGCTCTTTTCATAACAGACAAATACT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGSDPIP*TVSFLE
Trigger: CTCCAAGAACGAAACAGTTCATGGGATAGGATCAGA...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR TCA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATGTGTTTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: IQSFLPYFPACLYFPDANVFGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAAACAC...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAATCACAGATATGTTTaGTACCCCTGTAGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKNHRYV*YPCSFC
Trigger: GCAGAAACTACAGGGGTAGCAAACATATCTGTGATT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACAATGTCTTTCTTTTCTaGGGCTGGGGTAGAAGGACT +
Preference number: 2 (lower is better)
Translates to: SSMNTDNCILATLLAVPNNVFLF*GWGRRT
Trigger: AGTCCTTCTACCCCAGCCCCAGAAAAGAAAGACATT...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGCATGCCACCACAGCTaGCCAATTTTTGTATTTTTA +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKACHHS*PIFVFL
Trigger: TAAAAATACAAAAATTGGCCAGCTGTGGTGGCATGC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATTCAGGTTTGGTGTGTTaGTACCCTAGGGACACCAGG +
Preference number: 2 (lower is better)
Translates to: IQSFLPYFPACLYFPDANSGLVC*YPRDTR
Trigger: CCTGGTGTCCCTAGGGTACCAACACACCAAACCTGA...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR TCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCCTCCGCTTCAAGGATaGAAATTTCTTTGGGTATCT +
Preference number: 2 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEPPLQG*KFLWVS
Trigger: AGATACCCAAAGAAATTTTCATCCTTGAAGCGGAGG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTATGGGCCAAGTTTCTTaGTTAAAAGACTTCCATCCT +
Preference number: 2 (lower is better)
Translates to: LAICLSDSSMSCMASELAMGQVS*LKDFHP
Trigger: AGGATGGAAGTCTTTTAAGCAAGAAACTTGGCCCAT...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGCTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 2 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKLSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCAGTATTTCCCAGATTaGGGGATACACTTTAGCAAG +
Preference number: 2 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEQYFPD*GIHFSK
Trigger: CTTGCTAAAGTGTATCCCCCAATCTGGGAAATACTG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATACTTGCTACTCTACTaGCAGTTCCAAACATTTGTT +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKYLLLY*QFQTFV
Trigger: AACAAATGTTTGGAACTGCCAGTAGAGTAGCAAGTA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTAACAATGTACAGTTCTaGGCCTCAGCTGACCATAGT +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFNNVQF*ASADHS
Trigger: ACTATGGTCAGCTGAGGCTCAGAACTGTACATTGTT...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAAAATGCAAATACTATaGCATATAAGGAGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKKMQIL*HIRSLS
Trigger: GCTCAAGCTCCTTATATGGCATAGTATTTGCATTTT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACATTCTGCGACTCTTCTaGTTCTGCCTGGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYILRLF*FCLGVP
Trigger: TGGAACACCCAGGCAGAAGCAGAAGAGTCGCAGAAT...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR CCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAATTCCAATTAAGGCATaGAATGATGGACTCTATTTC +
Preference number: 2 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKIPIKA*NDGLYF
Trigger: GAAATAGAGTCCATCATTCCATGCCTTAATTGGAAT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp CCACCGTGCCTGGCCACCATCTGTATATCTTTGGAAAGTATGTATTaGGATCTGTCCCCATTTTTAATTGGGTTGTCTTCTTGTTCAATT +
Preference number: 2 (lower is better)
Translates to: PPCLATICISLESMY*DLSPFLIGLSSCSI
Trigger: AATTGAACAAGAAGACAACCCAATTAAAAATGGGGACAGATCCAAATACATACTTTCCAAAGATATACAGATGGTGGCCAGGCACGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp ATTTCATCCTCCCTCCGACCCTTGACAACCACCAATATGCTCTCTTaGGATTTACCCATTCTGGGTATTTCATATAAGTGGTATCATACA +
Preference number: 2 (lower is better)
Translates to: ISSSLRPLTTTNMLS*DLPILGISYKWYHT
Trigger: TGTATGATACCACTTATATGAAATACCCAGAATGGGTAAATCCAAAGAGAGCATATTGGTGGTTGTCAAGGGTCGGAGGGAGGATGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTaGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCAGATTC +
Preference number: 2 (lower is better)
Translates to: LTTAASKGFFAHIHL*AHKLRFLIDGFSRF
Trigger: GAATCTGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR TCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCAGTATCAGAGATACTaGAATCTCTGGAAGATGATT +
Preference number: 2 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEQYQRY*NLWKMI
Trigger: AATCATCTTCCAGAGATTTCAGTATCTCTGATACTG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCGTTGCGATTTCTTATTaGCGGTTTTTCCAGATTCAA +
Preference number: 2 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGVAISY*RFFQIQ
Trigger: TTGAATCTGGAAAAACCGTCAATAAGAAATCGCAAC...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR TCA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGGCTGTGAATGGAAACTaGATGTTTTCCTGCATTCAC +
Preference number: 2 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLAVNGN*MFSCIH
Trigger: GTGAATGCAGGAAAACATTCAGTTTCCATTCACAGC...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR TCA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCAGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGT +
Preference number: 2 (lower is better)
Translates to: PIYICWHISCDFLLTVFPDLGAF*SYPMNC
Trigger: ACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTC...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR CAA 90 bp TTTCTGCACCCATCCCTAATTCCTCACATTCCTTGTTTTCACACCTaGGCTAGATGTTACTCATTTCATAAAAGTGATGCGCATTCTTGT +
Preference number: 2 (lower is better)
Translates to: FLHPSLIPHIPCFHT*ARCYSFHKSDAHSC
Trigger: ACAAGAATGCGCATCACTTTTATGAAATGAGTAACATCTAGCCAAGGTGTGAAAACAAGGAATGTGAGGAATTAGGGATGGGTGCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp TTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTaGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: FLTTAASKGFFAHIH*LAHKLRFLIDGFSR
Trigger: TCTGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR TCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGCCTCAGTGAGCACATaGTGCCAACAATTCATTTCA +
Preference number: 2 (lower is better)
Translates to: FRNICSIESAYSSKIALIASVST*CQQFIS
Trigger: TGAAATGAATTGTTGGCATCATGTGCTCACTGAGGC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR TCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCAAAGCATTCCCCTCTTaGCCACTCCAGAATTCTGTT +
Preference number: 2 (lower is better)
Translates to: FRNICSIESAYSSKIALIKAFPS*PLQNSV
Trigger: AACAGAATTCTGGAGTGGTCAAGAGGGGAATGCTTT...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTCTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 2 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGLSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGGCAAAAGATACACAATaGCTAATGCAATCAAACAAG +
Preference number: 2 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEAKDTQ*LMQSNK
Trigger: CTTGTTTGATTGCATTAGCCATTGTGTATCTTTTGC...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCATAACAAGCTGTGAATaGAAACTGAATGTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGITSCE*KLNVFL
Trigger: CAGGAAAACATTCAGTTTCCATTCACAGCTTGTTAT...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR CAA 90 bp GTTAGTCATTCACCTATTGAAGGTTATCCTGATTCCTTAAAGTATTaGTCTGTTATGAAAAGAGCTGCTGTACGTGAGTACATGCTGGGT +
Preference number: 2 (lower is better)
Translates to: VSHSPIEGYPDSLKY*SVMKRAAVREYMLG
Trigger: ACCCAGCATGTACTCACGTACAGCAGCTCTTTTCATAACAGACAAATACTTTAAGGAATCAGGATAACCTTCAATAGGTGAATGACTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 2 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYLSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
3UTR-3UTR CCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTGGTGTGAAACAAGCTaGTCTTTCCTACTGAAGACT +
Preference number: 2 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGWCETS*SFLLKT
Trigger: AGTCTTCAGTAGGAAAGACCAGCTTGTTTCACACCA...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR CAA 90 bp ATTTCCATGATGGCTAGTGATGTTGAGTATCGTTTCATATGCTATTaGCATATCTTCTTTACAGAAAAGTCTCTTCAAGTCCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: ISMMASDVEYRFICY*HIFFTEKSLQVLCP
Trigger: TGGGCAGAGGACTTGAAGAGACTTTTCTGTAAAGAAGATATGCAAATAGCATATGAAACGATACTCAACATCACTAGCCATCATGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTaGCGATTTCTTATTGACGGTTTTTCCAGATTCAATACTTTCACA +
Preference number: 2 (lower is better)
Translates to: ASKGFFAHIHLLAHK*RFLIDGFSRFNTFT
Trigger: TGTGAAAGTATTGAATCTGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR TCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGGCTACACAAACACATaGAGTGTGCCTTATATTGAT +
Preference number: 2 (lower is better)
Translates to: FRNICSIESAYSSKIALIGYTNT*SVPYID
Trigger: ATCAATATAAGGCACACTTCATGTGTTTGTGTAGCC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTCAGCTGTGGTTTATTTaGTACATTCATAAGATGTTC +
Preference number: 2 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFQLWFI*YIHKMF
Trigger: GAACATCTTATGAATGTACCAAATAAACCACAGCTG...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCTTGTGTGCATTCTCTaGTGTACAAGAAGGCGTAAT +
Preference number: 2 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYLVCIL*CTRRRN
Trigger: ATTACGCCTTCTTGTACACCAGAGAATGCACACAAG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
3UTR-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGCTGTGATTTCAAACTaGATCCTTTACCACACTGAA +
Preference number: 2 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYAVISN*ILYHTE
Trigger: TTCAGTGTGGTAAAGGATTCAGTTTGAAATCACAGC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
3UTR-3UTR CCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACCCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 2 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR CCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTCCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 2 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR TCA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTGTTGCGATTTCTTATTaGCGGTTTTTCCAGATTCAA +
Preference number: 2 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLVAISY*RFFQIQ
Trigger: TTGAATCTGGAAAAACCGTCAATAAGAAATCGCAAC...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTTACAACGTTTAACATaGTTCCTCACCTGTATGAAC +
Preference number: 2 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYLQRLT*FLTCMN
Trigger: GTTCATACAGGTGAGGAACCATGTTAAACGTTGTAA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
3UTR-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTTCCTGAAAAGTCTCTaGAATGTCTTTCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYFLKSL*NVFLFW
Trigger: CCAGAAAAGAAAGACATTCCAGAGACTTTTCAGGAA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp CTCAGGACTGACCCGTGGTGGGGGATGCAACCACAGTaGGGACTAAAGCTTCCTTTTCCTCACAACCTGGGG +
Preference number: 3 (lower is better)
Translates to: LRTDPWWGMQPQ*GLKLPFPHNLG
Trigger: CCCCAGGTTGTGAGGAAAAGGAAGCTTTAGTCCTCACTGTGGTTGCATCCCCCACCACGGGTCAGTCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp CTCAGCTCACTGCAACTTCCGCCTCCTAGATTCAAGTaGTTCTCCCGTCCCAGCCTCCCAAGTAGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: LSSLQLPPPRFK*FSRPSLPSSWD
Trigger: ATCCCAGCTACTTGGGAGGCTGGGACGGGAGAATCACTTGAATCTAGGAGGCGGAAGTTGCAGTGAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp TCCATATCTGAAGACTCCTGTAGGGTACACCCACAGTaGCGACCAGTGCACTTTCCGGACCAATCTGGGGCG +
Preference number: 3 (lower is better)
Translates to: SISEDSCRVHPQ*RPVHFPDQSGA
Trigger: CGCCCCAGATTGGTCCGGAAAGTGCACTGGTCGTCACTGTGGGTGTACCCTACAGGAGTCTTCAGATATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 72 bp AAGACTCCTGTAGGGTACACCCACAGTGACGACCAGTaGACTTTCCGGACCAATCTGGGGCGATGTCATCTC +
Preference number: 3 (lower is better)
Translates to: KTPVGYTHSDDQ*TFRTNLGRCHL
Trigger: GAGATGACATCGCCCCAGATTGGTCCGGAAAGTGCACTGGTCGTCACTGTGGGTGTACCCTACAGGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CCA 72 bp CCCACAGTGACGACCAGTGCACTTTCCGGACCAATCTaGGGCGATGTCATCTCACCTTTGGGATACATGGAG +
Preference number: 3 (lower is better)
Translates to: PTVTTSALSGPI*GDVISPLGYME
Trigger: CTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGGTCCGGAAAGTGCACTGGTCGTCACTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACAGGGTCTCCCTATATaGGTCAGGCTTGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: PIWGDVISPLGYMEATGGQGLPI*VRLVSN
Trigger: GTTCGAGACAAGCCTGACCAATATAGGGAGACCCTG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCAGTCCAGGTCAAAGTaGGGGATGAACAGCACCTGT +
Preference number: 3 (lower is better)
Translates to: STCILLTDLWVESTEDQAQSRSK*GMNSTC
Trigger: ACAGGTGCTGTTCATCCCCAACTTTGACCTGGACTG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCAGTGACAAACAGACCTaGCTTCTACTCAGGACCCGG +
Preference number: 3 (lower is better)
Translates to: STCILLTDLWVESTEDQASDKQT*LLLRTR
Trigger: CCGGGTCCTGAGTAGAAGCAAGGTCTGTTTGTCACT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 72 bp GTAAGGAAGGGGTGCAAGCACACACCTTGTCTAGCCTaGTTGCAGTACCTGCATTCTGCTCACAGACCTCTG +
Preference number: 3 (lower is better)
Translates to: VRKGCKHTPCLA*LQYLHSAHRPL
Trigger: CAGAGGTCTGTGAGCAGAATGCAGGTACTGCAAGCAGGCTAGACAAGGTGTGTGCTTGCACCCCTTCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CCA 72 bp CCGAGTAGCTGGGATTACAGGTGTGTGGCCTTGTGCTaGGTTCTCAGCACAATGTTTCTGAGGTTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: PSSWDYRCVALC*VLSTMFLRFLH
Trigger: GTGGAGGAACCTCAGAAACATTGTGCTGAGAACCCAGCACAAGGCCACACACCTGTAATCCCAGCTACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp TGCAGACCAGGAGTCCCTTGGCCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATCCTATCCCATGAACTG +
Preference number: 3 (lower is better)
Translates to: CRPGVPWPKMDS*PWSFLILSHEL
Trigger: CAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCTGACAACTGCATACTaGCTACTCTACTGGCAGTTC +
Preference number: 3 (lower is better)
Translates to: STCILLTDLWVESTEDQALTTAY*LLYWQF
Trigger: GAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp ACAAAACACTGCAACAGTCCAGGTCAAAGTTGGGGATaGACAGCACCTGTGGGATCACCCTGGATCCCAAGA +
Preference number: 3 (lower is better)
Translates to: TKHCNSPGQSWG*TAPVGSPWIPR
Trigger: TCTTGGGATCCAGGGTGATCCCACAGGTGCTGTTCATCCCCAACTTTGACCTGGACTGTTGCAGTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 72 bp CATCACAAAACAGGAAGCACTGACCATCCAACACTGTaGCTAGGTAGTAAGGAAGGGGTGCAAGCACACACC +
Preference number: 3 (lower is better)
Translates to: HHKTGSTDHPTL*LGSKEGVQAHT
Trigger: GGTGTGTGCTTGCACCCCTTCCTTACTACCTAGGCACAGTGTTGGATGGTCAGTGCTTCCTGTTTTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTTGCAGTGGTGCAATCTaGGCTCACTGCAACTGCCAC +
Preference number: 3 (lower is better)
Translates to: LAICLSDSSMSCMASELACSGAI*AHCNCH
Trigger: GTGGCAGTTGCAGTGAGCCAAGATTGCACCACTGCA...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGAAATCGTACCTCTATaGAGGTTTCCACTAGTCATC +
Preference number: 3 (lower is better)
Translates to: STCILLTDLWVESTEDQAEIVPL*RFPLVI
Trigger: GATGACTAGTGGAAACCTCAATAGAGGTACGATTTC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCCTGAGCAGGGCATCTaGAATGGTGGTTCCCTCATG +
Preference number: 3 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEPEQGI*NGGSLM
Trigger: CATGAGGGAACCACCATTCAAGATGCCCTGCTCAGG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAGGCAGTTCCAAACATTaGTTTGTGGTTTATTTTGGG +
Preference number: 3 (lower is better)
Translates to: PIWGDVISPLGYMEATGGGSSKH*FVVYFG
Trigger: CCCAAAATAAACCACAAACAAATGTTTGGAACTGCC...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGATGTCATCTCACCTTaGGGATACATGGAGGCCACA +
Preference number: 3 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKDVISP*GYMEAT
Trigger: TGTGGCCTCCATGTATCCCAAAGGTGAGATGACATC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGTGCAAGCACACACCTaGTCTAGCCTGCTTGCAGTA +
Preference number: 3 (lower is better)
Translates to: LAICLSDSSMSCMASELAVQAHT*SSLLAV
Trigger: TACTGCAAGCAGGCTAGACAAGGTGTGTGCTTGCAC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp AGCAGCTGTCACACATTTCATCCTCCCTCCGACCCTTaGCAACCACCAATATGCTCTCTTTGGATTTACCCA +
Preference number: 3 (lower is better)
Translates to: SSCHTFHPPSDP*QPPICSLWIYP
Trigger: TGGGTAAATCCAAAGAGAGCATATTGGTGGTTGTCAAGGGTCGGAGGGAGGATGAAATGTGTGACAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp CTTGGCCCAAGATGGATTCCTGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGTTTCGTTCTTGGAGAG +
Preference number: 3 (lower is better)
Translates to: LGPRWIPDLGAF*SYPMNCFVLGE
Trigger: CTCTCCAAGAACGAAACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR GCA 72 bp CACTTAGCAATATGCCTATCAGATTCATCCATGTCCTaGATGGCCTCAGAGCTTGCTCTTGCTGAACAGGAC +
Preference number: 3 (lower is better)
Translates to: HLAICLSDSSMS*MASELALAEQD
Trigger: GTCCTGTTCAGCAAGAGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGTCATATCAGAGATATaGTCAGTATCAGAGATACTG +
Preference number: 3 (lower is better)
Translates to: STCILLTDLWVESTEDQAVISEI*SVSEIL
Trigger: CAGTATCTCTGATACTGACAATATCTCTGATATGAC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATCCAATTCATGGCAGTaGTTTCTGCACCCATCCCTA +
Preference number: 3 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKSNSWQ*FLHPSL
Trigger: TAGGGATGGGTGCAGAAACAACTGCCATGAATTGGA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGACTTCCATCCTGTCTaGGGAAACAACCATTTCCAA +
Preference number: 3 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKDFHPV*GNNHFQ
Trigger: TTGGAAATGGTTGTTTCCCAAGACAGGATGGAAGTC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCTTGAGCCCAGGAGTTaGAAACCAGACTGGAAAACA +
Preference number: 3 (lower is better)
Translates to: LAICLSDSSMSCMASELALEPRS*KPDWKT
Trigger: TGTTTTCCAGTCTGGTTTCAAACTCCTGGGCTCAAG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATTGTTCCAGGGAGAGGTaGCAGACCAGGAGTCCCTTG +
Preference number: 3 (lower is better)
Translates to: IQSFLPYFPACLYFPDANCSRER*QTRSPL
Trigger: CAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAACA...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR-3UTR CAA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGAAACCTGCCAGCACCTaGGCTTTGGACTTTCCAGCC +
Preference number: 3 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLKPAST*ALDFPA
Trigger: GGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTT...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588312.2
3UTR CCA 72 bp GTATGTGAGTGCTGTCCTCAATACTGTCAACACTTCTaGCTTCTACCAGGCAAGGCTGCATGTAGATTTGCA +
Preference number: 3 (lower is better)
Translates to: VCECCPQYCQHF*LLPGKAACRFA
Trigger: TGCAAATCTACATGCAGCCTTGCCTGGTAGAAGCCAGAAGTGTTGACAGTATTGAGGACAGCACTCACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCATGGGCCAAGTTTCTaGCTTAAAAGACTTCCATCC +
Preference number: 3 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEHGPSF*LKRLPS
Trigger: GGATGGAAGTCTTTTAAGCAAGAAACTTGGCCCATG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGAAAAGCATTCCCCTCTaGACCACTCCAGAATTCTGT +
Preference number: 3 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEKSIPL*TTPEFC
Trigger: ACAGAATTCTGGAGTGGTCAAGAGGGGAATGCTTTT...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp TCTGAACTTGAAAAACCCATTAACAATGTACAGTTCTaGGCCTCAGCTGACCATAGTGCTCATGCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: SELEKPINNVQF*ASADHSAHAKS
Trigger: GGACTTGGCATGAGCACTATGGTCAGCTGAGGCTCAGAACTGTACATTGTTAATGGGTTTTTCAAGTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATCTCGTTGTTTTAATTaGCTTTTCCCTCATGACAAG +
Preference number: 3 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKSRCFN*LFPHDK
Trigger: CTTGTCATGAGGGAAAAGCAAATTAAAACAACGAGA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGGATGGATTCCTGACCTaGGAGCTTTCTGATCCTATC +
Preference number: 3 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMDGFLT*ELSDPI
Trigger: GATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATC...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR TCA 72 bp CTGCCTACTCCTCTACCACCCATTTCTGAAGCCATCTaGTTTAGTAAGCTGTATGCAAAAGATACACAATGG +
Preference number: 3 (lower is better)
Translates to: LPTPLPPISEAI*FSKLYAKDTQW
Trigger: CCATTGTGTATCTTTTGCATACAGCTTACTAAATCAGATGGCTTCAGAAATGGGTGGTAGAGGAGTAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTAAGCTTTGTTTAGCTTaGGGGAAAAGTCAAACTATC +
Preference number: 3 (lower is better)
Translates to: LAICLSDSSMSCMASELAKLCLA*GKSQTI
Trigger: GATAGTTTGACTTTTCCCCAAAGCTAAACAAAGCTT...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 3 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWSCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR CAA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 3 (lower is better)
Translates to: SQQLHPKGFSPIYICWHISCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR GCA 72 bp CCTAATCAAGTATTATTCTTTCCCACAGTATGTGAGTaGTGTCCTCAATACTGTCAACACTTCTGGCTTCTA +
Preference number: 3 (lower is better)
Translates to: PNQVLFFPTVCE*CPQYCQHFWLL
Trigger: TAGAAGCCAGAAGTGTTGACAGTATTGAGGACAGCACTCACATACTGTGGGAAAGAATAATACTTGATTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR GCA 72 bp GTTCAAGCAATTCTCCTGAGTAGCTTGGATTATAGATaGATGCCACCACAGCTGGCCAATTTTTGTATTTTT +
Preference number: 3 (lower is better)
Translates to: VQAILLSSLDYR*MPPQLANFCIF
Trigger: AAAAATACAAAAATTGGCCAGCTGTGGTGGCATGCATCTATAATCCAAGCTACTCAGGAGAATTGCTTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATTTGTTGGCACATAAGTaGCGATTTCTTATTGACGGT +
Preference number: 3 (lower is better)
Translates to: IQSFLPYFPACLYFPDANLLAHK*RFLIDG
Trigger: ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAA...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR CCA 72 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTaGCACATAAGTTGCGATTTCTTATTGACGGTTTTT +
Preference number: 3 (lower is better)
Translates to: LHPKGFSPIYIC*HISCDFLLTVF
Trigger: AAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR-3UTR CAA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTGCCCATATACATTTGTaGGCACATAAGTTGCGATTT +
Preference number: 3 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGAHIHL*AHKLRF
Trigger: AAATCGCAACTTATGTGCCAACAAATGTATATGGGC...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
3UTR TCA 72 bp ACAAAGCAGAAGGTGTTTCAGAAATATTTGCAGTATTaGATCCGCATATTCCTCCAAGATAGCCCTAATCTA +
Preference number: 3 (lower is better)
Translates to: TKQKVFQKYLQY*IRIFLQDSPNL
Trigger: TAGATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAAACACCTTCTGCTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp CCTTCTGTGAATCATCATTCTTCACCCCAAGTATCTTaGGATTGGATTCTGTATAAGCAGAATACAACAGTT +
Preference number: 3 (lower is better)
Translates to: PSVNHHSSPQVS*DWILYKQNTTV
Trigger: AACTGTTGTATTCTGCTTATACAGAATCCAATCTCAAGATACTTGGGGTGAAGAATGATGATTCACAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGAAGTGTGCCTTATATaGATTACTAAAGAGGTTGCT +
Preference number: 3 (lower is better)
Translates to: FRNICSIESAYSSKIALIEVCLI*ITKEVA
Trigger: AGCAACCTCTTTAGTAATCAATATAAGGCACACTTC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR-3UTR CAA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 3 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLSCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
3UTR TCA 72 bp TGTTTTAATTTGCTTTTCCCTCATGACAAGTGTCACTaGGCATTATTTGGTATGCTTATTTGCCATCTGTAT +
Preference number: 3 (lower is better)
Translates to: CFNLLFPHDKCH*ALFGMLICHLY
Trigger: ATACAGATGGCAAATAAGCATACCAAATAATGCTCAGTGACACTTGTCATGAGGGAAAAGCAAATTAAAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR TCA 72 bp ATGTTTTCAAAGCAGTTATCTAAATACCTAGGAGTGTaGTTGTTGGCTCATATTGTGAAGCTTTGTTTAGCT +
Preference number: 3 (lower is better)
Translates to: MFSKQLSKYLGV*LLAHIVKLCLA
Trigger: AGCTAAACAAAGCTTCACAATATGAGCCAACAATCACACTCCTAGGTATTTAGATAACTGCTTTGAAAACAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAAATCCTGACCTCAAGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGNPDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACTTGAGGTCAGGATT...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCTGGTCTCGCACTCCTaGCCTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQALVSHS*PQVILP
Trigger: TGGGAGGATCACTTGAGGTCAGGAGTGCGAGACCAG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCTCGCCCAGCCTGGAGTaGAGTGGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQASPSLE*SGAILA
Trigger: AGCCAAGATTGCACCACTGCACTCCAGGCTGGGCGA...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCTAGGAGGCGGAGGTTaGAGTGAGCTGAAATGGTGC +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQALGGGG*SELKWC
Trigger: GCACCATTTCAGCTCACTGCAACCTCCGCCTCCTAG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp AGGAAGGGGTGCAAGCACACACCTTGTCTAGCCTGCTaGCAGTACCTGCATTCTGCTCACAGACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RKGCKHTPCLAC*QYLHSAHRPLG
Trigger: ACCCAGAGGTCTGTGAGCAGAATGCAGGTACTGCAAGCAGGCTAGACAAGGTGTGTGCTTGCACCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CAATTTTCCAGACTGTGTCTCCAGAGGATGCAGCAACAAGGCGTCATCTTGGAAGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: QFSRLCLQRMQQQGVILEVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...TTCCAAGATGACGCCTTGTTGCTGCATCCTCTGGAGACACAGTCTGGAAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCACGGTCAGTTTTGTGTaGCTCGCTGGAAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQATVSFV*LAGSDR
Trigger: CCTGTCACTTCCAGCGAGGCACACAAAACTGACCGT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGATCTTCTGCTTCTGCCTaGGTGTTCCAGGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGSSASA*VFQGEV
Trigger: AACCTCTCCCTGGAACACCCAGGCAGAAGCAGAAGA...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACTTGTCTCGAACTCCTaGGTTCCAGCAATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGLVSNS*VPAILQ
Trigger: CTGGAGGATTGCTGGAACCCAGGAGTTCGAGACAAG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGATGAACAGCACCTGTaGGATCACCCTGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQADEQHL*DHPGSQ
Trigger: TTGGGATCCAGGGTGATCCCACAGGTGCTGTTCATC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACAACTCGGCTGGCCCGTTaGCCACGACGGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTTRLAR*PRRAMN
Trigger: GTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGT...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGPKMDS*PWSFLI
Trigger: GATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACCACAAACACATCCATaGATGACAAAGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGPQTHP*MTKVPR
Trigger: CCTGGGGACCTTTGTCATTCATGGATGTGTTTGTGG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACATCACAGTAAAGACTaGGCTGCCTTCTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGHHSKD*AAFSSG
Trigger: TCCTGAGGAGAAGGCAGCTCAGTCTTTACTGTGATG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGGTGGAAGGATCCCTTaGGCCCAGGAGGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAGGRIP*AQEVGA
Trigger: AGCCCCAACCTCCTGGGCTCAAGGGATCCTTCCACC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGATTCATCCATGTCCTaGATGGCCTCAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQADSSMS*MASELA
Trigger: AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACTCCAGACTCGGCTaGCCCGTTGACCACGACGGG +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWHSRLG*PVDHDG
Trigger: CCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTG...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACACCTTTGGGATACATaGAGGCCACAGGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGHLWDT*RPQEEK
Trigger: CTTTTCCTCCTGTGGCCTCCATGTATCCCAAAGGTG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp CACTGCGACAAAACACTGCAACAGTCCAGGTCAAAGTaGGGGATGAACAGCACCTGTGGGATCACCCTGGAT +
Preference number: 4 (lower is better)
Translates to: HCDKTLQQSRSK*GMNSTCGITLD
Trigger: ATCCAGGGTGATCCCACAGGTGCTGTTCATCCCCAACTTTGACCTGGACTGTTGCAGTGTTTTGTCGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp TGCCTAGGTAGTAAGGAAGGGGTGCAAGCACACACCTaGTCTAGCCTGCTTGCAGTACCTGCATTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CLGSKEGVQAHT*SSLLAVPAFCS
Trigger: TGAGCAGAATGCAGGTACTGCAAGCAGGCTAGACAAGGTGTGTGCTTGCACCCCTTCCTTACTACCTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATACTCGGCTGGCCCGTTaGCCACGACGGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: LHPKGFSPIYICWHISCDTRLAR*PRRAMN
Trigger: GTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGT...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGGCAGGTGGACTGCTTaGGCCCAGGAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKGRWTA*AQEFET
Trigger: GGTTTCAAACTCCTGGGCTCAAGCAGTCCACCTGCC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACCTCCACTGGCCAACCTaGGGACCACTGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNLHWPT*GPLWGT
Trigger: TGTGCCCCACAGTGGTCCTCAGGTTGGCCAGTGGAG...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGCATTGCACCAGCAATaGATGAGAGTTCCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQAALHQQ*MRVPVA
Trigger: TGCAACAGGAACTCTCATTCATTGCTGGTGCAATGC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACCATGCACAACATTGTaGAGCCACCACCTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGPCTTL*SHHLLV
Trigger: AACTAAGAGGTGGTGGCTGCACAATGTTGTGCATGG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELALSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCTCGTTCTTGGAGAGGTaGGACCCAAATAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQASFLER*DPNRSC
Trigger: ACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGA...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCAACACCCTGCTCTCCTaGAGTGATAAGTGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQANTLLS*SDKWPF
Trigger: AAAAGGCCACTTATCACTCCAGGAGAGCAGGGTGTT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGATGTGTGGCCTTGTGCTaGGTTCTCAGCACAATGTTT +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGCVALC*VLSTMF
Trigger: AAACATTGTGCTGAGAACCCAGCACAAGGCCACACA...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp GCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: AFKAFCRTSQLVFIFLMPVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...TGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR TCA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: CIQSFLPYFPACLYFPDAVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGTCCCCAGGACTTGGTaGTTTTTGGCTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKVPRTW*FLAALG
Trigger: CCCAAGAGCAGCCAAAAATCACCAAGTCCTGGGGAC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGCTCATGCCAAGTCCTaGGCAGGGCATCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKAHAKS*AGHLEW
Trigger: CCATTCAAGATGCCCTGCTCAGGACTTGGCATGAGC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGCCTCAGTGAGCACATaGTGCCAACAATTCATTTCA +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQAASVST*CQQFIS
Trigger: TGAAATGAATTGTTGGCATCATGTGCTCACTGAGGC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAAAAGCATTCCCCTCTTaGCCACTCCAGAATTCTGTT +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGKAFPS*PLQNSV
Trigger: AACAGAATTCTGGAGTGGTCAAGAGGGGAATGCTTT...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAATGGTTTCGATCTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKMVSIS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAGATCGAAACCAT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACCCACAGTATGTGAGTaGTGTCCTCAATACTGTCAA +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGPTVCE*CPQYCQ
Trigger: TTGACAGTATTGAGGACAGCACTCACATACTGTGGG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAGGAAAAGTGAGGCCTaGACCCTGAGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKRKSEA*TLSAEE
Trigger: CTCCTCAGCACTCAGGGTGCAGGCCTCACTTTTCCT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTCGCCCAGGCTGGAGTaGAGTGGTGAGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNSPRLE*SGEIWA
Trigger: AGCCCAGATCTCACCACTGCACTCCAGCCTGGGCGA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACACTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTLSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAGAACTGTTTCGTTCTTaGAGAGGTGGGACCCAAATA +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGELFRS*RGGTQI
Trigger: TATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTC...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCCTGTGGGATCACCCTaGATCCCAAGAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEPVGSP*IPRGKG
Trigger: GCCCTTCCCTCTTGGGATCCAGGGTGATCCCACAGG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp ATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCTaGCTGAACAGGACTCCATTGCATGGATGTACCCCA +
Preference number: 4 (lower is better)
Translates to: IHPCPAWPQSLL*LNRTPLHGCTP
Trigger: TGGGGTACATCCATGCAATGGAGTCCTGTTCAGCAAGAGCAAGCTCTGAGGCCATGCAGGACATGGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGACCACGACGGGCGATaGACGCTATCTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELADHDGR*TLSEEQ
Trigger: TTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGGGTTGACCCCTGCATaGGTTCGCTCATGTACAATG +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKGLTPA*VRSCTM
Trigger: CATTGTACATGAGCGAACTCATGCAGGGGTCAACCC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGGGGCACAACCACAGTaGAGACTGGAGCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKGAQPQ*RLELVS
Trigger: AGAAACAAGCTCCAGTCTTCACTGTGGTTGTGCCCC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGATTTGCTTTTCCCTCATaGCAAGTGTCACTGAGCATT +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGFAFPS*QVSLSI
Trigger: AATGCTCAGTGACACTTGTCATGAGGGAAAAGCAAA...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTGCCCAGACTGGACTTaGACTCCCAGGCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQECPDWT*TPRLKR
Trigger: TCGCTTGAGCCTGGGAGTTCAAGTCCAGTCTGGGCA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTTCAAGCCATTCTCCTaGCTCCGCCTCCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNFKPFS*LRLRSS
Trigger: GCTACTCCGGAGGCGGAGGCAGGAGAATGGCTTGAA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGATGGCCTTTTTGTTCATaGTGGCATTATACATCCCAG +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGWPFCS*WHYTSQ
Trigger: CTGGGATGTATAATGCCAGCATGAACAAAAAGGCCA...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATCTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LHPKGFSPIYICWHISCDLSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp GCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCACTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: AFKAFCRTSQLVFIFLMPLSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...TGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCTTGTGTGCATTCTCTaGTGTACAAGAAGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQALVCIL*CTRRRN
Trigger: ATTACGCCTTCTTGTACACCAGAGAATGCACACAAG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGCAAGAGGGGGCACATaGCCATCACAAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKARGGT*PSQNRK
Trigger: CTTCCTGTTTTGTGATGGCCATGTGCCCCCTCTTGC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCGACCACGACGGGCGATaGACGCTATCTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGDHDGR*TLSEEQ
Trigger: TTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTC...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGACTCGGCTGGCCCGTTaGCCACGACGGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLTRLAR*PRRAMN
Trigger: GTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGT...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGTGTTTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAVFGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAAACAC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: LHPKGFSPIYICWHISCDGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: CIQSFLPYFPACLYFPDAGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGGTCAAAGTTGGGGATaGACAGCACCTGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAGQSWG*TAPVGS
Trigger: TGATCCCACAGGTGCTGTTCATCCCCAACTTTGACC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGGTTTCTCTTCAGGACTaGCCTAGGGACCCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEVSLQD*PRDPSG
Trigger: CCCACTAGGGTCCCTAGGTCAGTCCTGAAGAGAAAC...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACAAAACAGGAAGCACTaGCCATCCAACACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKQNRKH*PSNTVP
Trigger: AGGCACAGTGTTGGATGGTCAGTGCTTCCTGTTTTG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACATGACAAGTGTCACTaGGCATTATTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGHDKCH*ALFGML
Trigger: AAGCATACCAAATAATGCTCAGTGACACTTGTCATG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGGTTCCAGGGAGAGGTTaGAGACCAGGAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKVPGRG*RPGVPW
Trigger: CCAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAAC...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACACTCCACCTCCAGATCTaGAGCCAGAAGGGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTLHLQI*SQKGSQ
Trigger: TTGCGAACCCTTCTGGCTGCAGATCTGGAGGTGGAG...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCTCCACCTCCAGATCTaGAGCCAGAAGGGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWLHLQI*SQKGSQ
Trigger: TTGCGAACCCTTCTGGCTGCAGATCTGGAGGTGGAG...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATCTCCACCTCCAGATCTaGAGCCAGAAGGGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHLHLQI*SQKGSQ
Trigger: TTGCGAACCCTTCTGGCTGCAGATCTGGAGGTGGAG...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCCTCCACCTCCAGATCTaGAGCCAGAAGGGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGLHLQI*SQKGSQ
Trigger: TTGCGAACCCTTCTGGCTGCAGATCTGGAGGTGGAG...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACTCAGCTTCCTGAGTTaGTGGGATTACAGGCACATG +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKLSFLS*WDYRHM
Trigger: CATGTGCCTGTAATCCCAGCAACTCAGGAAGCTGAG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCCACTCCAGACTCGGCTaGCCCGTTGACCACGACGGG +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIHSRLG*PVDHDG
Trigger: CCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTG...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCACACTCCAGACTCGGCTaGCCCGTTGACCACGACGGG +
Preference number: 4 (lower is better)
Translates to: PIYICWHISCDFLLTVFPHSRLG*PVDHDG
Trigger: CCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTG...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGCTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLLSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR CCA 90 bp AAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATCTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: KAFCRTSQLVFIFLMPIHLSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...ATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR CCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGCAGGGCATCTTGAATaGTGGTTCCCTCATGACTAC +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKAGHLE*WFPHDY
Trigger: GTAGTCATGAGGGAACCACCATTCAAGATGCCCTGC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTATCTCAGGACCAACCTaGGGGATGCATCACACTGAG +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAISGPT*GMHHTE
Trigger: CTCAGTGTGATGCATCCCCCAGGTTGGTCCTGAGAT...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp TATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTaGCTCTTGCTGAACAGGACTCCATTGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: YQIHPCPAWPQS*LLLNRTPLHGC
Trigger: ACATCCATGCAATGGAGTCCTGTTCAGCAAGAGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp AAGCAGCTGTCACACATTTCATCCTCCCTCCGACCCTaGACAACCACCAATATGCTCTCTTTGGATTTACCC +
Preference number: 4 (lower is better)
Translates to: KQLSHISSSLRP*TTTNMLSLDLP
Trigger: GGGTAAATCCAAAGAGAGCATATTGGTGGTTGTCAAGGGTCGGAGGGAGGATGAAATGTGTGACAGCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCAGACCACGACGGGCGATaGACGCTATCTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: QSFLPYFPACLYFPDANPDHDGR*TLSEEQ
Trigger: TTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTC...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATACTCGGCTGGCCCGTTaGCCACGACGGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYTRLAR*PRRAMN
Trigger: GTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000542986.6
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCACTCGGCTGGCCCGTTaGCCACGACGGGCGATGAAC +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEITRLAR*PRRAMN
Trigger: GTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGT...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCAGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: PIYICWHISCDFLLTVFPVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACAGGGTTGACCCCTGCATaGGTTCGCTCATGTACAATG +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTGLTPA*VRSCTM
Trigger: CATTGTACATGAGCGAACTCATGCAGGGGTCAACCC...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACAGTATCAGAGATACTaGAATCTCTGGAAGATGATT +
Preference number: 4 (lower is better)
Translates to: PIWGDVISPLGYMEATGGQYQRY*NLWKMI
Trigger: AATCATCTTCCAGAGATTTCAGTATCTCTGATACTG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATACTCCCAGGACTTGGTaGTTTTTGGCTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHTPRTW*FLAALG
Trigger: CCCAAGAGCAGCCAAAAATCACCAAGTCCTGGGAGT...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542986.6
CDS-3UTR GCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGTTCCAGGGAGAGGTTaGAGACCAGGAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFVPGRG*RPGVPW
Trigger: CCAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAAC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCATGAATACTGACAACTaGATACTTGCTACTCTACTG +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQAMNTDN*ILATLL
Trigger: CAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCAT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCCTGCTTGCAGTACCTaGATTCTGCTCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEPACST*ILLTDL
Trigger: GAGGTCTGTGAGCAGAATGCAGGTACTGCAAGCAGG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAACACCTTGTCTAGCCTaGTTGCAGTACCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKTPCLA*LQYLHS
Trigger: AGAATGCAGGTACTGCAAGCAGGCTAGACAAGGTGT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCCACTCCAGACTCGGCTaGCCCGTTGACCACGACGGG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIHSRLG*PVDHDG
Trigger: CCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTG...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCACTCCAGACTCGGCTaGCCCGTTGACCACGACGGG +
Preference number: 4 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLHSRLG*PVDHDG
Trigger: CCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTG...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGTCAGGTTTGGTGTGTTaGTACCCTAGGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWSGLVC*YPRDTR
Trigger: CCTGGTGTCCCTAGGGTACCAACACACCAAACCTGA...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAGGGTCTCCCTATATTaGTCAGGCTTGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKRVSLY*SGLSRT
Trigger: AGTTCGAGACAAGCCTGACCAATATAGGGAGACCCT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCTTTCCGGACCAATCTaGGGCGATGTCATCTCACCT +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQELSGPI*GDVISP
Trigger: AGGTGAGATGACATCGCCCCAGATTGGTCCGGAAAG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCTGCTCACAGACCTCTaGGTTGAATCCACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQELLTDL*VESTED
Trigger: GTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGTGAGCCACCGTGCCTaGCCACCATCTGTATATCTT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNVSHRA*PPSVYL
Trigger: AAGATATACAGATGGTGGCCAGGCACGGTGGCTCAC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCATATTGGCAAGTATGTaGAGAAATTGGAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQAILASM*RNWKPC
Trigger: ACAAGGCTTCCAATTTCTCCACATACTTGCCAATAT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTAGTTTGAGACTAGCCTaGCCTGGCCAACATGGTGAA +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELASLRLA*PGQHGE
Trigger: TTCACCATGTTGGCCAGGCCAGGCTAGTCTCAAACT...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIVPRWK*QDARDA
Trigger: AGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCAC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCGGGTTGACCCCTGCATaGGTTCGCTCATGTACAATG +
Preference number: 4 (lower is better)
Translates to: CIQSFLPYFPACLYFPDAGLTPA*VRSCTM
Trigger: CATTGTACATGAGCGAACTCATGCAGGGGTCAACCC...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGGGGTTGACCCCTGCATaGGTTCGCTCATGTACAATG +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKGLTPA*VRSCTM
Trigger: CATTGTACATGAGCGAACTCATGCAGGGGTCAACCC...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACATGGTGGTTCCCTCATaGCTACATACACCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNMVVPS*LHTPLG
Trigger: CCCTAACGGTGTATGTAGTCATGAGGGAACCACCAT...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGTCCCTTCCCTTCTGTaGATCATCATTCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNVPSLL*IIILHP
Trigger: GGGGTGAAGAATGATGATTCACAGAAGGGAAGGGAC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATTGAGCCCAGGAGTTTaGAACCAGACTGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKLSPGV*NQTGKH
Trigger: ATGTTTTCCAGTCTGGTTTCAAACTCCTGGGCTCAA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCTATCCTCCTCAGGACTaGCCCGTGGTGGGGGATGCA +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIYPPQD*PVVGDA
Trigger: TGCATCCCCCACCACGGGTCAGTCCTGAGGAGGATA...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAACGGTCAGTTTTGTGTaGCTCGCTGGAAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SQQLHPKGFSPIYICWHITVSFV*LAGSDR
Trigger: CCTGTCACTTCCAGCGAGGCACACAAAACTGACCGT...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATACGGTCAGTTTTGTGTaGCTCGCTGGAAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LHPKGFSPIYICWHISCDTVSFV*LAGSDR
Trigger: CCTGTCACTTCCAGCGAGGCACACAAAACTGACCGT...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CAATCCATAAGATCATCAATTTTCCAGACTGTGTCTCCAGAGGATGCAGCAACAACCAGACACCAAACCTaGCAGCACCTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QSIRSSIFQTVSPEDAATTRHQT*QHLGFG
Trigger: TCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGT...TGTTGCTGCATCCTCTGGAGACACAGTCTGGAAAATTGATGATCTTATGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR GCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGACCAGACACCAAACCTaGCAGCACCTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKTRHQT*QHLGFG
Trigger: TCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGT...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR GCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACAGCTTGGATTATAGATaGATGCCACCACAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNSLDYR*MPPQLA
Trigger: GGCCAGCTGTGGTGGCATGCATCTATAATCCAAGCT...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCTGAGGAGGGAGCTTTaGTGTTTCACTTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQELRREL*CFTLPC
Trigger: ACAGGGCAAAGTGAAACAGCAAAGCTCCCTCCTCAG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGGTGACAAACAGACCTTaGTTCTACTCAGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEVTNRP*FYSGPG
Trigger: TCCGGGTCCTGAGTAGAAGCAAGGTCTGTTTGTCAC...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGGACCATCCAACACTGTaGCTAGGTAGTAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEDHPTL*LGSKEG
Trigger: CCCTTCCTTACTACCTAGGCACAGTGTTGGATGGTC...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCTTTCACTTAGCAATATaGCTATCAGATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQAFHLAI*LSDSSM
Trigger: CATGGATGAATCTGATAGGCATATTGCTAAGTGAAA...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTCTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFLSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACCTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYLSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR CCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATATCTTCTGCTTCTGCCTaGGTGTTCCAGGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQQLHPKGFSPIYICWHISSASA*VFQGEV
Trigger: AACCTCTCCCTGGAACACCCAGGCAGAAGCAGAAGA...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATCAGGTTTGGTGTGTTaGTACCCTAGGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: QSFLPYFPACLYFPDANPSGLVC*YPRDTR
Trigger: CCTGGTGTCCCTAGGGTACCAACACACCAAACCTGA...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGTCAGGTTTGGTGTGTTaGTACCCTAGGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKSGLVC*YPRDTR
Trigger: CCTGGTGTCCCTAGGGTACCAACACACCAAACCTGA...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTGGACAGGTCTGATTTaGAACTTGGGCCTGCACCAT +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEWTGLI*NLGLHH
Trigger: ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATTGGACAGGTCTGATTTaGAACTTGGGCCTGCACCAT +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHWTGLI*NLGLHH
Trigger: ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCA...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGCAAAAGATACACAATaGCTAATGCAATCAAACAAG +
Preference number: 4 (lower is better)
Translates to: STCILLTDLWVESTEDQAAKDTQ*LMQSNK
Trigger: CTTGTTTGATTGCATTAGCCATTGTGTATCTTTTGC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCCTCAGGACTGACCCGTaGTGGGGGATGCAACCACAG +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALILRTDP*WGMQPQ
Trigger: CTGTGGTTGCATCCCCCACCACGGGTCAGTCCTGAG...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCTCCTCAGGACCAACCTaGGGACCCCTGGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALISSGPT*GPLGGR
Trigger: TCTACCTCCCAGGGGTCCCCAGGTTGGTCCTGAGGA...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGAGCTTCCTGAGTTGCTaGGATTACAGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQESFLSC*DYRHMP
Trigger: TGGCATGTGCCTGTAATCCCAGCAACTCAGGAAGCT...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp CATCAATTTTCCAGACTGTGTTTGGACAGGTCTGATTaGGAACTTGGGCCTGCACCATACACAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HQFSRLCLDRSD*ELGPAPYTALL
Trigger: GAGAAGAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAAACACAGTCTGGAAAATTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546126.7
CDS-3UTR TCA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGGCGATGAACGCTATCTaGGGAACAAGGATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLAMNAI*GTRISP
Trigger: TGGCGAGATCCTTGTTCCTCAGATAGCGTTCATCGC...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCGTCCCCAGGACTTGGTaGTTTTTGGCTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NVVHSKLFAVLPSLSLFSVPRTW*FLAALG
Trigger: CCCAAGAGCAGCCAAAAATCACCAAGTCCTGGGGAC...GGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATACCACAAACACATCCATaGATGACAAAGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQQLHPKGFSPIYICWHIPQTHP*MTKVPR
Trigger: CCTGGGGACCTTTGTCATTCATGGATGTGTTTGTGG...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR TCA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTGTGTTTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFVFGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAAACAC...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542711.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAATGAGTTTTCTGGTGTaGAACAAGCTGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKMSFLV*NKLVFP
Trigger: AGGAAAGACCAGCTTGTTTCACACCAGAAAACTCAT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGGGATGCAACCACAGTaGGGACTAAAGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNGMQPQ*GLKLPF
Trigger: AAAAGGAAGCTTTAGTCCTCACTGTGGTTGCATCCC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATTCTGCGACTCTTCTaGTTCTGCCTGGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKILRLF*FCLGVP
Trigger: TGGAACACCCAGGCAGAAGCAGAAGAGTCGCAGAAT...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp AGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTACCAGACACCAAACCTaGCAGCACCTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SFPNVVHSKLFAVLPSLSTRHQT*QHLGFG
Trigger: TCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGT...AGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR GCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTTGCCCAGGATGGAGTaGAGGGGCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFLPRME*RGMIIA
Trigger: AGCTATGATCATGCCCCTGCACTCCATCCTGGGCAA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGACCAACCTGGGGGATaGATCACACTGAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFDQPGG*ITLRTR
Trigger: TCTGGTTCTCAGTGTGATGCATCCCCCAGGTTGGTC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGTAGTAAGGAAGGGGTaGAAGCACACACCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNVVRKG*KHTPCL
Trigger: TAGACAAGGTGTGTGCTTGCACCCCTTCCTTACTAC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTTCAAGCGATCCTCCTaGCTCAGCTTCCTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFFKRSS*LSFLSC
Trigger: GCAACTCAGGAAGCTGAGGCAGGAGGATCGCTTGAA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGGGAATTTTGCTTTCTTaGTCTGTCACCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEGILLS*SVTWAG
Trigger: TCCAGCCCAGGTGACAGAGCAAGAAAGCAAAATTCC...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGCTGGGTCTAGCAGCTaGCACTCCCAGGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIAGSSS*HSQDLV
Trigger: CACCAAGTCCTGGGAGTGGCAGCTGCTAGACCCAGC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542986.6
CDS-3UTR CCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCCTGTCCGGACCCTGGTaGCCATCCCTACGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEILSGPW*PSLRSV
Trigger: AACTGACCGTAGGGATGGCCACCAGGGTCCGGACAG...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTCAGGTTTGGTGTGTTaGTACCCTAGGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFSGLVC*YPRDTR
Trigger: CCTGGTGTCCCTAGGGTACCAACACACCAAACCTGA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTACTGTCAACACTTCTaGCTTCTACCAGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNYCQHF*LLPGKA
Trigger: AGCCTTGCCTGGTAGAAGCCAGAAGTGTTGACAGTA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTTTTAAGATTTATGGCTaGGTGCTTGGCTCACACCTG +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAFKIYG*VLGSHL
Trigger: CAGGTGTGAGCCAAGCACCCAGCCATAAATCTTAAA...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTCTTCTACTCAGGACCTaGGGATCACTAGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFLLLRT*GSLEAA
Trigger: TGCAGCCTCTAGTGATCCCCAGGTCCTGAGTAGAAG...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTGACCACGACGGGCGATaGACGCTATCTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFDHDGR*TLSEEQ
Trigger: TTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTC...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTGACCACGACGGGCGATaGACGCTATCTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGDHDGR*TLSEEQ
Trigger: TTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTC...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWSDPIP*TVSFLE
Trigger: CTCCAAGAACGAAACAGTTCATGGGATAGGATCAGA...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHSDPIP*TVSFLE
Trigger: CTCCAAGAACGAAACAGTTCATGGGATAGGATCAGA...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: CIQSFLPYFPACLYFPDADLGAF*SYPMNC
Trigger: ACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTC...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGGTCCCCAGGACTTGGTaGTTTTTGGCTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLVPRTW*FLAALG
Trigger: CCCAAGAGCAGCCAAAAATCACCAAGTCCTGGGGAC...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR TCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGAAACACATCCATGAATaGCAAAGGTCCCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWKHIHE*QRSPGL
Trigger: AAGTCCTGGGGACCTTTGTCATTCATGGATGTGTTT...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAACACATCCATGAATaGCAAAGGTCCCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHKHIHE*QRSPGL
Trigger: AAGTCCTGGGGACCTTTGTCATTCATGGATGTGTTT...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTAGTGTTTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPNVVHSKLFAVLPSLSLVFGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAAACAC...TAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGGCGTAATTTCCCACTaGAGGATTTCTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNGVISH*RISHID
Trigger: GTCAATGTGAGAAATCCTTCAGTGGGAAATTACGCC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATGGCGTAATTTCCCACTaGAGGATTTCTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHGVISH*RISHID
Trigger: GTCAATGTGAGAAATCCTTCAGTGGGAAATTACGCC...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLGSSKP*RGSRIE
Trigger: CTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCC...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR TCA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAAAATTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CIQSFLPYFPACLYFPDAKIGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTT...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATATGAGCCACGGCGCCTaGCCACACCTGGCTAATCTT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYMSHGA*PHLANL
Trigger: AAGATTAGCCAGGTGTGGTCAGGCGCCGTGGCTCAT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATAGCACTTTGGGAGGCTaGGGGTGGATCACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYSTLGG*GWITRS
Trigger: TGACCTCGTGATCCACCCTCAGCCTCCCAAAGTGCT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCTGCACCCTGAGTGCTaGGGAGGGAGCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYLHPEC*GGSFAV
Trigger: AACAGCAAAGCTCCCTCCTCAGCACTCAGGGTGCAG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATAGGGTACACCCACAGTaGCGACCAGTGCACTTTCCG +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYRVHPQ*RPVHFP
Trigger: CGGAAAGTGCACTGGTCGTCACTGTGGGTGTACCCT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGTCCTCTGCCCATTTTaGTATTGGGTTGTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAVLCPF*YWVVFL
Trigger: CAAAAAGACAACCCAATATCAAAATGGGCAGAGGAC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGTTCCAGGGAGAGGTTaGAGACCAGGAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIVPGRG*RPGVPW
Trigger: CCAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAAC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACAGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp CTGATGCCAATCCATAAGATCATCAATTTTCCAGACTGTGTCTCCAGAGGATGCGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LMPIHKIINFPDCVSRGCAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...GCATCCTCTGGAGACACAGTCTGGAAAATTGATGATCTTATGGATTGGCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQELSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGCTCCACCTCCAGATCTaGAGCCAGAAGGGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLLHLQI*SQKGSQ
Trigger: TTGCGAACCCTTCTGGCTGCAGATCTGGAGGTGGAG...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATACCAGACACCAAACCTaGCAGCACCTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: IQSFLPYFPACLYFPDANTRHQT*QHLGFG
Trigger: TCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGT...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR GCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCTCACCTGGGCTGGAGTaGAGTAGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALISPGLE*SSMISA
Trigger: AGCCGAGATCATGCTACTGCACTCCAGCCCAGGTGA...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGGAACTGTTTCGTTCTTaGAGAGGTGGGACCCAAATA +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWELFRS*RGGTQI
Trigger: TATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTC...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGTGGACAGGTCTGATTTaGAACTTGGGCCTGCACCAT +
Preference number: 4 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLWTGLI*NLGLHH
Trigger: ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCA...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCACCAGCACCTTGGCTTTaGACTTTCCAGCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: QSFLPYFPACLYFPDANPPAPWL*TFQPSK
Trigger: TTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGG...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCCCAGCACCTTGGCTTTaGACTTTCCAGCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CIQSFLPYFPACLYFPDAPAPWL*TFQPSK
Trigger: TTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGG...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGCAGTGGTGCAATCTTaGCTCACTGCAACTGCCACC +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIAVVQS*LTATAT
Trigger: GGTGGCAGTTGCAGTGAGCCAAGATTGCACCACTGC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCCTTTTTGTTCATGCTaGCATTATACATCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAPFCSC*HYTSQA
Trigger: AGCCTGGGATGTATAATGCCAGCATGAACAAAAAGG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTATGTGACCTTTTTGTaGCCAGCCTCTTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNYVTFL*PASFCT
Trigger: TGTGCAGAAAGAGGCTGGCCACAAAAAGGTCACATA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp TCCCTCCGACCCTTGACAACCACCAATATGCTCTCTTaGGATTTACCCATTCTGGGTATTTCATATAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLRPLTTTNMLS*DLPILGISYKW
Trigger: CCACTTATATGAAATACCCAGAATGGGTAAATCCAAAGAGAGCATATTGGTGGTTGTCAAGGGTCGGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTGCGATGAACGCTATCTaGGGAACAAGGATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFAMNAI*GTRISP
Trigger: TGGCGAGATCCTTGTTCCTCAGATAGCGTTCATCGC...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTGCGATGAACGCTATCTaGGGAACAAGGATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGAMNAI*GTRISP
Trigger: TGGCGAGATCCTTGTTCCTCAGATAGCGTTCATCGC...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGACCACGACGGGCGATaGACGCTATCTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIDHDGR*TLSEEQ
Trigger: TTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMDLGAF*SYPMNC
Trigger: ACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTC...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFDLGAF*SYPMNC
Trigger: ACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTC...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCCCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: NVVHSKLFAVLPSLSLFSPKMDS*PWSFLI
Trigger: GATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGG...GGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACAGCTGTGAATGGAAACTaGATGTTTTCCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTAVNGN*MFSCIH
Trigger: GTGAATGCAGGAAAACATTCAGTTTCCATTCACAGC...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATGGCGTAATTTCCCACTaGAGGATTTCTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: LHPKGFSPIYICWHISCDGVISH*RISHID
Trigger: GTCAATGTGAGAAATCCTTCAGTGGGAAATTACGCC...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTACGGTCAGTTTTGTGTaGCTCGCTGGAAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFTVSFV*LAGSDR
Trigger: CCTGTCACTTCCAGCGAGGCACACAAAACTGACCGT...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SQQLHPKGFSPIYICWHIAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATACTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: SQQLHPKGFSPIYICWHILSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCTCCACCTCCAGATCTaGAGCCAGAAGGGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYLHLQI*SQKGSQ
Trigger: TTGCGAACCCTTCTGGCTGCAGATCTGGAGGTGGAG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR GCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCCTCCACCTCCAGATCTaGAGCCAGAAGGGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEILHLQI*SQKGSQ
Trigger: TTGCGAACCCTTCTGGCTGCAGATCTGGAGGTGGAG...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTACCAGACACCAAACCTaGCAGCACCTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFTRHQT*QHLGFG
Trigger: TCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGT...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000542986.6
CDS-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACCAAAGGCCCATTTGTaGCTGTTTCTATCATTATAT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKPKAHL*LFLSLY
Trigger: ATATAATGATAGAAACAGGCACAAATGGGCCTTTGG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp AAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATTCGTTCTTGGAGAGGTaGGACCCAAATAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KAFCRTSQLVFIFLMPIHSFLER*DPNRSC
Trigger: ACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGA...ATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATTGGACAGGTCTGATTTaGAACTTGGGCCTGCACCAT +
Preference number: 4 (lower is better)
Translates to: IQSFLPYFPACLYFPDANWTGLI*NLGLHH
Trigger: ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCA...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCTGGACAGGTCTGATTTaGAACTTGGGCCTGCACCAT +
Preference number: 4 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPWTGLI*NLGLHH
Trigger: ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCA...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTTTCCAGACTGTGTTTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEFPDCV*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAAACACAGTCTGGAAA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTGGTGTGAAACAAGCTaGTCTTTCCTACTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNWCETS*SFLLKT
Trigger: AGTCTTCAGTAGGAAAGACCAGCTTGTTTCACACCA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATGGTGTGAAACAAGCTaGTCTTTCCTACTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTWCETS*SFLLKT
Trigger: AGTCTTCAGTAGGAAAGACCAGCTTGTTTCACACCA...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATTGGTGTGAAACAAGCTaGTCTTTCCTACTGAAGACT +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHWCETS*SFLLKT
Trigger: AGTCTTCAGTAGGAAAGACCAGCTTGTTTCACACCA...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTGGTGTGAAATAAGCTaGTATTTCCGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNWCEIS*YFRLKA
Trigger: AGCCTTCAGTCGGAAATACCAGCTTATTTCACACCA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATCTTGTGTGCATTCTCTaGTGTACAAGAAGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHLVCIL*CTRRRN
Trigger: ATTACGCCTTCTTGTACACCAGAGAATGCACACAAG...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTCCAGCACCTTGGCTTTaGACTTTCCAGCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: SFPNVVHSKLFAVLPSLSPAPWL*TFQPSK
Trigger: TTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGG...AGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTACTTCCATCCTGTCTTaGGAAACAACCATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELATSILS*ETTISK
Trigger: TTTGGAAATGGTTGTTTCCCAAGACAGGATGGAAGT...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGGGATTACAGGTGTGTaGCCTTGTGCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIGITGV*PCAGFS
Trigger: TGAGAACCCAGCACAAGGCCACACACCTGTAATCCC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCCAATATGCTCTCTTTaGATTTACCCATTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAPICSL*IYPFWV
Trigger: TACCCAGAATGGGTAAATCCAAAGAGAGCATATTGG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGCGATGAACGCTATCTaGGGAACAAGGATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYAMNAI*GTRISP
Trigger: TGGCGAGATCCTTGTTCCTCAGATAGCGTTCATCGC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000542986.6
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGCGATGAACGCTATCTaGGGAACAAGGATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIAMNAI*GTRISP
Trigger: TGGCGAGATCCTTGTTCCTCAGATAGCGTTCATCGC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFSDPIP*TVSFLE
Trigger: CTCCAAGAACGAAACAGTTCATGGGATAGGATCAGA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp AAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KAFCRTSQLVFIFLMPIHSDPIP*TVSFLE
Trigger: CTCCAAGAACGAAACAGTTCATGGGATAGGATCAGA...ATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACCCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYPKMDS*PWSFLI
Trigger: GATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGG...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTAAACACATCCATGAATaGCAAAGGTCCCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFKHIHE*QRSPGL
Trigger: AAGTCCTGGGGACCTTTGTCATTCATGGATGTGTTT...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTCCACAAACACATCCATaGATGACAAAGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFPQTHP*MTKVPR
Trigger: CCTGGGGACCTTTGTCATTCATGGATGTGTTTGTGG...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQECVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGTTGCGATTTCTTATTaGCGGTTTTTCCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: LAICLSDSSMSCMASELAVAISY*RFFQIQ
Trigger: TTGAATCTGGAAAAACCGTCAATAAGAAATCGCAAC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGGCTGTGAATGGAAACTaGATGTTTTCCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKAVNGN*MFSCIH
Trigger: GTGAATGCAGGAAAACATTCAGTTTCCATTCACAGC...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAATGAGTTTTCTGGTGTaGAACAAGCTGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQQLHPKGFSPIYICWHIMSFLV*NKLVFP
Trigger: AGGAAAGACCAGCTTGTTTCACACCAGAAAACTCAT...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCAATGAGTTTTCTGGTGTaGAACAAGCTGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QSFLPYFPACLYFPDANPMSFLV*NKLVFP
Trigger: AGGAAAGACCAGCTTGTTTCACACCAGAAAACTCAT...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGCTGTGATTTCAAACTaGATCCTTTACCACACTGAA +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNAVISN*ILYHTE
Trigger: TTCAGTGTGGTAAAGGATTCAGTTTGAAATCACAGC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACAGCTGTGATTTCAAACTaGATCCTTTACCACACTGAA +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTAVISN*ILYHTE
Trigger: TTCAGTGTGGTAAAGGATTCAGTTTGAAATCACAGC...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGGGTTGACCCCTGCATaGGTTCGCTCATGTACAATG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIGLTPA*VRSCTM
Trigger: CATTGTACATGAGCGAACTCATGCAGGGGTCAACCC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTAAAAATTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPNVVHSKLFAVLPSLSLKIGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTT...TAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAAAATTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPKIGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTT...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGGCTACACAAACACATaGAGTGTGCCTTATATTGAT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNGYTNT*SVPYID
Trigger: ATCAATATAAGGCACACTTCATGTGTTTGTGTAGCC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTCACCCCAAGTATCTTaGGATTGGATTCTGTATAAG +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNSPQVS*DWILYK
Trigger: CTTATACAGAATCCAATCTCAAGATACTTGGGGTGA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCACCATCTCAGCCTCCTaGAGTGCTGGGATTATAGGT +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALITISAS*SAGIIG
Trigger: ACCTATAATCCCAGCACTTCAGGAGGCTGAGATGGT...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGTATCATACAGTATGTaGCCTTTTTGTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFVSYSM*PFCGQP
Trigger: AGGCTGGCCACAAAAAGGTCACATACTGTATGATAC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGTGTCCAGGACTTGGTaGTTTTTGGCTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIVSRTW*FLAALG
Trigger: CCCAAGAGCAGCCAAAAATCACCAAGTCCTGGACAC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539248.6
CDS-3UTR TCA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGCCACAAACACATCCATaGATGACAAAGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLPQTHP*MTKVPK
Trigger: TTTGGGGACCTTTGTCATTCATGGATGTGTTTGTGG...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592241.5
CDS-3UTR GCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCACGGTCAGTTTTGTGTaGCTCGCTGGAAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEITVSFV*LAGSDR
Trigger: CCTGTCACTTCCAGCGAGGCACACAAAACTGACCGT...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCATTCTGCGACTCTTCTaGTTCTGCCTGGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIILRLF*FCLGVP
Trigger: TGGAACACCCAGGCAGAAGCAGAAGAGTCGCAGAAT...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFLSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACATGGGCCAAGTTTCTTaGTTAAAAGACTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNMGQVS*LKDFHP
Trigger: AGGATGGAAGTCTTTTAAGCAAGAAACTTGGCCCAT...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATACAATCTCAGCTCACTaGAACCTCCGCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYTISAH*NLRLSS
Trigger: ACTGGAGAGGCGGAGGTTGCAGTGAGCTGAGATTGT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCACAGTGACGACCAGTaGACTTTCCGGACCAATCTG +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYHSDDQ*TFRTNL
Trigger: CAGATTGGTCCGGAAAGTGCACTGGTCGTCACTGTG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACTCGTTGTTTTAATTTaGTTTTCCCTCATGACAAGT +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKLVVLI*FSLMTS
Trigger: ACTTGTCATGAGGGAAAAGCAAATTAAAACAACGAG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATCGTTCTTGGAGAGGTaGGACCCAAATAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FPNVVHSKLFAVLPSLSLSFLER*DPNRSC
Trigger: ACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGA...TAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTCTTCTGCTTCTGCCTaGGTGTTCCAGGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEISSASA*VFQGEV
Trigger: AACCTCTCCCTGGAACACCCAGGCAGAAGCAGAAGA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTCTTCTGCTTCTGCCTaGGTGTTCCAGGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYSSASA*VFQGEV
Trigger: AACCTCTCCCTGGAACACCCAGGCAGAAGCAGAAGA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536435.7
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACTGGACAGGTCTGATTTaGAACTTGGGCCTGCACCAT +
Preference number: 4 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYWTGLI*NLGLHH
Trigger: ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCA...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTTCCAGACTGTGTTTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LHPKGFSPIYICWHISCDFPDCV*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAAACACAGTCTGGAAA...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542711.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAATAACAAGCTGTGAATaGAAACTGAATGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKITSCE*KLNVFL
Trigger: CAGGAAAACATTCAGTTTCCATTCACAGCTTGTTAT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCCTTGTGTGCATTCTCTaGTGTACAAGAAGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: CIQSFLPYFPACLYFPDALVCIL*CTRRRN
Trigger: ATTACGCCTTCTTGTACACCAGAGAATGCACACAAG...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATCCAGCCTTCAAAATTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: QSFLPYFPACLYFPDANPSSLQN*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGA...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCAGCACCTTGGCTTTaGACTTTCCAGCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IQSFLPYFPACLYFPDANPAPWL*TFQPSK
Trigger: TTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGG...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTCTCCATGTTATACATaGGTATCAAAAGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQESPCYT*VSKAFP
Trigger: GGGGAATGCTTTTGATACCCATGTATAACATGGAGA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTCACATCTCCAATTCATaGCAGTTGTTTCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFHISNS*QLFLHP
Trigger: TGGGTGCAGAAACAACTGCCATGAATTGGAGATGTG...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACACAGCCTTTTCACACTaGTCTCTTTCACTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNTAFSH*SLSLSN
Trigger: ATTGCTAAGTGAAAGAGACCAGTGTGAAAAGGCTGT...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp ACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTaGTTGGCACATAAGTTGCGATTTCTTATTGACGGT +
Preference number: 4 (lower is better)
Translates to: TAASKGFFAHIH*LAHKLRFLIDG
Trigger: ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCCCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIPKMDS*PWSFLI
Trigger: GATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGG...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ACTAGTGAAATCTATATATTTCAAACTCTTTCCATGCGTGCCACATTTATGAGGCCCAAGATGGATTCCTaGCCTTGGAGCTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: TSEIYIFQTLSMRATFMRPKMDS*PWSFLI
Trigger: GATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGG...CCTCATAAATGTGGCACGCATGGAAAGAGTTTGAAATATATAGATTTCACTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LHPKGFSPIYICWHISCDCVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QSFLPYFPACLYFPDANPCVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp GCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCATGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: AFKAFCRTSQLVFIFLMPCVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...TGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGGTTGCGATTTCTTATTaGCGGTTTTTCCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWVAISY*RFFQIQ
Trigger: TTGAATCTGGAAAAACCGTCAATAAGAAATCGCAAC...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATGCTGTGAATGGAAACTaGATGTTTTCCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: KAFCRTSQLVFIFLMPIHAVNGN*MFSCIH
Trigger: GTGAATGCAGGAAAACATTCAGTTTCCATTCACAGC...ATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGGCTGTGATTTCAAACTaGATCCTTTACCACACTGAA +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKAVISN*ILYHTE
Trigger: TTCAGTGTGGTAAAGGATTCAGTTTGAAATCACAGC...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGGTGCCAAGAAGTACATaGAAAGATTTTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEVPRST*KDFQHH
Trigger: GTGATGTTGAAAATCTTTTCATGTACTTCTTGGCAC...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCATTCTGCGACTCTTCTaGTTCTGCCTGGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIILRLF*FCLGVP
Trigger: TGGAACACCCAGGCAGAAGCAGAAGAGTCGCAGAAT...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTAGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: FPNVVHSKLFAVLPSLSLAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...TAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR GCA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCCTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPLSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCCTCAGCCTTCCCAAGTaGTGGTATTACATGGATGAG +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALILSLPK*WYYMDE
Trigger: CTCATCCATGTAATACCAGCACTTGGGAAGGCTGAG...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCCCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACACCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATCTGGTGTGAAACAAGCTaGTCTTTCCTACTGAAGACT +
Preference number: 4 (lower is better)
Translates to: FCRTSQLVFIFLMPIHKIWCETS*SFLLKT
Trigger: AGTCTTCAGTAGGAAAGACCAGCTTGTTTCACACCA...GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGTGGTGTGAAACAAGCTaGTCTTTCCTACTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMWCETS*SFLLKT
Trigger: AGTCTTCAGTAGGAAAGACCAGCTTGTTTCACACCA...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGTGGTGTGAAATAAGCTaGTATTTCCGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMWCEIS*YFRLKA
Trigger: AGCCTTCAGTCGGAAATACCAGCTTATTTCACACCA...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATCTGGTGTGAAATAAGCTaGTATTTCCGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FCRTSQLVFIFLMPIHKIWCEIS*YFRLKA
Trigger: AGCCTTCAGTCGGAAATACCAGCTTATTTCACACCA...GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTCCAGCCTTCAAAATTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SFPNVVHSKLFAVLPSLSSSLQN*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGA...AGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTTCCAGCCTTCAAAATTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFSSLQN*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGA...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCAGGACTCCATTGCATaGATGTACCCCAGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYQDSIA*MYPSLV
Trigger: AACTAGGCTGGGGTACATCCATGCAATGGAGTCCTG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYDLGAF*SYPMNC
Trigger: ACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536435.7
ENST00000541009.6
ENST00000542986.6
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIDLGAF*SYPMNC
Trigger: ACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATCTGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: FCRTSQLVFIFLMPIHKICVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGTGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLCVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp AGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SFPNVVHSKLFAVLPSLSCVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...AGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGGTTGCGATTTCTTATTaGCGGTTTTTCCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKVAISY*RFFQIQ
Trigger: TTGAATCTGGAAAAACCGTCAATAAGAAATCGCAAC...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCATGAGTTTTCTGGTGTaGAACAAGCTGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NVVHSKLFAVLPSLSLFSMSFLV*NKLVFP
Trigger: AGGAAAGACCAGCTTGTTTCACACCAGAAAACTCAT...GGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGGCTGTGATTTCAAACTaGATCCTTTACCACACTGAA +
Preference number: 4 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMAVISN*ILYHTE
Trigger: TTCAGTGTGGTAAAGGATTCAGTTTGAAATCACAGC...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTGGCGTAATTTCCCACTaGAGGATTTCTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFGVISH*RISHID
Trigger: GTCAATGTGAGAAATCCTTCAGTGGGAAATTACGCC...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGGGCGTAATTTCCCACTaGAGGATTTCTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLGVISH*RISHID
Trigger: GTCAATGTGAGAAATCCTTCAGTGGGAAATTACGCC...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ACTAGTGAAATCTATATATTTCAAACTCTTTCCATGCGTGCCACATTTATGAGGAAAATTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSEIYIFQTLSMRATFMRKIGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTT...CCTCATAAATGTGGCACGCATGGAAAGAGTTTGAAATATATAGATTTCACTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTAAAATTGGACAGGTCTaGTTTGGAACTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLKIGQV*FGTWAC
Trigger: GCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTT...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR TCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTAGTATTTGTCTGTTATaGAAAGAGCTGCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFSICLL*KELLYV
Trigger: CACGTACAGCAGCTCTTTTCATAACAGACAAATACT...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATCAAACACATCCATGAATaGCAAAGGTCCCCAAATAGA +
Preference number: 4 (lower is better)
Translates to: FCRTSQLVFIFLMPIHKIKHIHE*QRSPNR
Trigger: TCTATTTGGGGACCTTTGTCATTCATGGATGTGTTT...GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592241.5
CDS-3UTR GCA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCAGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PIYICWHISCDFLLTVFPAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR GCA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR GCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTCTTTCTCACAACAGCTaGATCCAAAGGGTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFLSHNS*IQRVFR
Trigger: GCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATAGGGAAGGGCAAATGTaGACCCTATGTGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYREGQM*TLCACF
Trigger: AAAGCAAGCACATAGGGTGCACATTTGCCCTTCCCT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCACTGCGACAAAACACTaGAACAGTCCAGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALITATKH*NSPGQS
Trigger: ACTTTGACCTGGACTGTTGCAGTGTTTTGTCGCAGT...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTTTGCTGTTTCACTTTaGCCTGTAATATCTGAACAA +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEFAVSL*PVISEQ
Trigger: TTGTTCAGATATTACAGGGCAAAGTGAAACAGCAAA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTATGGCCATCTACTTTaGCTTTTATTATCTCTATCC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEYGHLL*LLLSLS
Trigger: GGATAGAGATAATAAAAGGCAAAGTAGATGGCCATA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTCGTTCTTGGAGAGGTaGGACCCAAATAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEISFLER*DPNRSC
Trigger: ACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACGAACTGTTTCGTTCTTaGAGAGGTGGGACCCAAATA +
Preference number: 4 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYELFRS*RGGTQI
Trigger: TATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTC...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATACCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: SQQLHPKGFSPIYICWHIPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp GCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCACCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: AFKAFCRTSQLVFIFLMPPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...TGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGATAACAAGCTGTGAATaGAAACTGAATGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWITSCE*KLNVFL
Trigger: CAGGAAAACATTCAGTTTCCATTCACAGCTTGTTAT...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCTGGTGTGAAATAAGCTaGTATTTCCGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPWCEIS*YFRLKA
Trigger: AGCCTTCAGTCGGAAATACCAGCTTATTTCACACCA...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATTACAACGTTTAACATaGTTCCTCACCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: QSFLPYFPACLYFPDANPLQRLT*FLTCMN
Trigger: GTTCATACAGGTGAGGAACCATGTTAAACGTTGTAA...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCAGCTGTGGTTTATTTaGTACATTCATAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEQLWFI*YIHKMF
Trigger: GAACATCTTATGAATGTACCAAATAAACCACAGCTG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCTTAACAGTCCAGCTGTaGTTTATTTGGTACATTCAT +
Preference number: 4 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGLTVQL*FIWYIH
Trigger: ATGAATGTACCAAATAAACCACAGCTGGACTGTTAA...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATATGTCATCTCACCTTTaGGATACATGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYMSSHL*DTWRPQ
Trigger: CTGTGGCCTCCATGTATCCCAAAGGTGAGATGACAT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACATTCCAATTAAGGCATaGAATGATGGACTCTATTTC +
Preference number: 4 (lower is better)
Translates to: SSMNTDNCILATLLAVPNIPIKA*NDGLYF
Trigger: GAAATAGAGTCCATCATTCCATGCCTTAATTGGAAT...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTGAACTGTTTCGTTCTTaGAGAGGTGGGACCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGELFRS*RGGTCN
Trigger: ATTACAGGTCCCACCTCTCCAAGAACGAAACAGTTC...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546126.7
3UTR CAA 72 bp CCTAGGAGTGTGATTGTTGGCTCATATTGTGAAGCTTaGTTTAGCTTTGGGGAAAAGTCAAACTATCTTCCA +
Preference number: 4 (lower is better)
Translates to: PRSVIVGSYCEA*FSFGEKSNYLP
Trigger: TGGAAGATAGTTTGACTTTTCCCCAAAGCTAAACAAAGCTTCACAATATGAGCCAACAATCACACTCCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp GCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTaGGCACATAAGTTGCGATTTCTTATTGACGGTTTT +
Preference number: 4 (lower is better)
Translates to: AASKGFFAHIHL*AHKLRFLIDGF
Trigger: AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEISDPIP*TVSFLE
Trigger: CTCCAAGAACGAAACAGTTCATGGGATAGGATCAGA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGCATTCAAAGCTTTTTaGCGTACTTCCCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIAFKAF*RTSQLV
Trigger: GACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
CDS-3UTR CCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGAACTGTTTCGTTCTTaGAGAGGTGGGACCCAAATA +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEIELFRS*RGGTQI
Trigger: TATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCATGGTGTGAAATAAGCTaGTATTTCCGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PIYICWHISCDFLLTVFPWCEIS*YFRLKA
Trigger: AGCCTTCAGTCGGAAATACCAGCTTATTTCACACCA...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTCTTGTGTGCATTCTCTaGTGTACAAGAAGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGLVCIL*CTRRRN
Trigger: ATTACGCCTTCTTGTACACCAGAGAATGCACACAAG...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTTTACAACGTTTAACATaGTTCCTCACCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFLQRLT*FLTCMN
Trigger: GTTCATACAGGTGAGGAACCATGTTAAACGTTGTAA...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATCTTACAACGTTTAACATaGTTCCTCACCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: FCRTSQLVFIFLMPIHKILQRLT*FLTCMN
Trigger: GTTCATACAGGTGAGGAACCATGTTAAACGTTGTAA...GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGTTACAACGTTTAACATaGTTCCTCACCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMLQRLT*FLTCMN
Trigger: GTTCATACAGGTGAGGAACCATGTTAAACGTTGTAA...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACTCCAGCCTTCAAAATTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYSSLQN*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGA...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTCCAGCCTTCAAAATTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLSSLQN*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGA...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGGGCATCTTGAATGGTaGTTCCCTCATGACTACATA +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYGHLEW*FPHDYI
Trigger: TATGTAGTCATGAGGGAACCACCATTCAAGATGCCC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCCAGTATTTCCCAGATTaGGGGATACACTTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIQYFPD*GIHFSK
Trigger: CTTGCTAAAGTGTATCCCCCAATCTGGGAAATACTG...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTTCCTGAAAAGTCTCTaGAATGTCTTTCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFFLKSL*NVFLFW
Trigger: CCAGAAAAGAAAGACATTCCAGAGACTTTTCAGGAA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTCCTGGAGTGATAAGTaGCCTTTTTGTTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYSWSDK*PFCSCW
Trigger: CCAGCATGAACAAAAAGGCCACTTATCACTCCAGGA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTTTTTAGTAGAGACGTaGTTTCACCAAGTTAACCAG +
Preference number: 4 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFFLVET*FHQVNQ
Trigger: CTGGTTAACTTGGTGAAACCACGTCTCTACTAAAAA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp CTGCATACTTGCTACTCTACTGGCAGTTCCAAACATTaGTTTGTGGTTTATTTTGGGTTTCCTAATTACACG +
Preference number: 4 (lower is better)
Translates to: LHTCYSTGSSKH*FVVYFGFPNYT
Trigger: CGTGTAATTAGGAAACCCAAAATAAACCACAAACAAATGTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp CTGGCCACCATCTGTATATCTTTGGAAAGTATGTATTaGGATCTGTCCCCATTTTTAATTGGGTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LATICISLESMY*DLSPFLIGLSS
Trigger: AGAAGACAACCCAATTAAAAATGGGGACAGATCCAAATACATACTTTCCAAAGATATACAGATGGTGGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGCVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGCTGTGAATGGAAACTaGATGTTTTCCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYAVNGN*MFSCIH
Trigger: GTGAATGCAGGAAAACATTCAGTTTCCATTCACAGC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR TCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTGCTGTGATTTCAAACTaGATCCTTTACCACACTGAA +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFAVISN*ILYHTE
Trigger: TTCAGTGTGGTAAAGGATTCAGTTTGAAATCACAGC...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCCTCCGCTTCAAGGATaGAAATTTCTTTGGGTATCT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYPPLQG*KFLWVS
Trigger: AGATACCCAAAGAAATTTTCATCCTTGAAGCGGAGG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ACTAGTGAAATCTATATATTTCAAACTCTTTCCATGCGTGCCACATTTATGAGGTTTCCAGACTGTGTTTaGACAGGTCTGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TSEIYIFQTLSMRATFMRFPDCV*TGLIWN
Trigger: GTTCCAAATCAGACCTGTCCAAACACAGTCTGGAAA...CCTCATAAATGTGGCACGCATGGAAAGAGTTTGAAATATATAGATTTCACTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546126.7
CDS-3UTR CCA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCCCCATATACATTTGTTaGCACATAAGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPPIYIC*HISCDF
Trigger: GAAATCGCAACTTATGTGCCAACAAATGTATATGGG...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTATAACAAGCTGTGAATaGAAACTGAATGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFITSCE*KLNVFL
Trigger: CAGGAAAACATTCAGTTTCCATTCACAGCTTGTTAT...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp AGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTCAGCTGTGGTTTATTTaGTACATTCATAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: SFPNVVHSKLFAVLPSLSQLWFI*YIHKMF
Trigger: GAACATCTTATGAATGTACCAAATAAACCACAGCTG...AGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGCATGCCACCACAGCTaGCCAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIACHHS*PIFVFL
Trigger: TAAAAATACAAAAATTGGCCAGCTGTGGTGGCATGC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp CTACTGGCAGTTCCAAACATTTGTTTGTGGTTTATTTaGGGTTTCCTAATTACACGATCACATCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: LLAVPNICLWFI*GFLITRSHLQF
Trigger: GAATTGGAGATGTGATCGTGTAATTAGGAAACCCAAAATAAACCACAAACAAATGTTTGGAACTGCCAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp TCACCTATTGAAGGTTATCCTGATTCCTTAAAGTATTaGTCTGTTATGAAAAGAGCTGCTGTACGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: SPIEGYPDSLKY*SVMKRAAVREY
Trigger: GTACTCACGTACAGCAGCTCTTTTCATAACAGACAAATACTTTAAGGAATCAGGATAACCTTCAATAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp GGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTaGCGATTTCTTATTGACGGTTTTTCCAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: GFFAHIHLLAHK*RFLIDGFSRFN
Trigger: ATTGAATCTGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR TCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTGCGTGCCACATTTATaGGGTTTTTGTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEICVPHL*GFCLER
Trigger: TCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
CDS-3UTR TCA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCAGTTGCGATTTCTTATTaGCGGTTTTTCCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: PIYICWHISCDFLLTVFPVAISY*RFFQIQ
Trigger: TTGAATCTGGAAAAACCGTCAATAAGAAATCGCAAC...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATAATCACAGATATGTTTaGTACCCCTGTAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYNHRYV*YPCSFC
Trigger: GCAGAAACTACAGGGGTAGCAAACATATCTGTGATT...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp ATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCAGCTGTGGTTTATTTaGTACATTCATAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: IQSFLPYFPACLYFPDANQLWFI*YIHKMF
Trigger: GAACATCTTATGAATGTACCAAATAAACCACAGCTG...ATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCCTTGTTTTCACACCTTaGCTAGATGTTACTCATTTC +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALILVFTP*LDVTHF
Trigger: GAAATGAGTAACATCTAGCCAAGGTGTGAAAACAAG...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR TCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGTTGCGATTTCTTATTaGCGGTTTTTCCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYVAISY*RFFQIQ
Trigger: TTGAATCTGGAAAAACCGTCAATAAGAAATCGCAAC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTTCTTTTGTTTCCCATaGTTCTGGTGTCATATCCAA +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYFFCFP*FWCHIQ
Trigger: TTGGATATGACACCAGAAGCATGGGAAACAAAAGAA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTCAGCTGTGGTTTATTTaGTACATTCATAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFQLWFI*YIHKMF
Trigger: GAACATCTTATGAATGTACCAAATAAACCACAGCTG...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCACAGCTGTGGTTTATTTaGTACATTCATAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: PIYICWHISCDFLLTVFPQLWFI*YIHKMF
Trigger: GAACATCTTATGAATGTACCAAATAAACCACAGCTG...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CCA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCTGGATTTACCCATTCTaGGTATTTCATATAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FRNICSIESAYSSKIALIWIYPF*VFHISG
Trigger: ACCACTTATATGAAATACCCAGAATGGGTAAATCCA...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
3UTR CAA 72 bp TTTCATATAAGTGGTATCATACAGTATGTGACCTTTTaGTGGCCAGCCTCTTTCTGCACATTGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: FHISGIIQYVTF*WPASFCTLLLF
Trigger: AAATAAAAGCAATGTGCAGAAAGAGGCTGGCCACAAAAAGGTCACATACTGTATGATACCACTTATATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR GCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTATCCAATAAATCATTaGCAAATCCAGTGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYYPINH*QIQCQE
Trigger: TTCTTGGCACTGGATTTGGCAATGATTTATTGGATA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CCA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTTAACAGTCCAGCTGTaGTTTATTTGGTACATTCAT +
Preference number: 4 (lower is better)
Translates to: SMYLKPIRIISSIITSEILTVQL*FIWYIH
Trigger: ATGAATGTACCAAATAAACCACAGCTGGACTGTTAA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTTAACAGTCCAGCTGTaGTTTATTTGGTACATTCAT +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYLTVQL*FIWYIH
Trigger: ATGAATGTACCAAATAAACCACAGCTGGACTGTTAA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CCA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGTTCTTTATATGTTCTaGATACTAGACCCTTATCAG +
Preference number: 4 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYVLYMF*ILDPYQ
Trigger: CTGATAAGGGTCTAGTATCCAGAACATATAAAGAAC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS TCA 90 bp CGCAACCACTCCAGACTCGGCTGGCCCGTTGACCACGACGGGCGATaGACGCTATCTGAGGAACAAGGATCTCGCCATCGGCGCGGAACA +
Preference number: 5 (lower is better)
Translates to: RNHSRLGWPVDHDGR*TLSEEQGSRHRRGT
Trigger: TGTTCCGCGCCGATGGCGAGATCCTTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTGGTTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000500625.7
ENST00000536435.7
ENST00000537973.5
ENST00000539248.6
ENST00000541211.6
ENST00000542711.6
ENST00000546126.7
CDS CCA 90 bp GAACGCTATCTGAGGAACAAGGATCTCGCCATCGGCGCGGAACAATaGCGGCCGCTACGTATGTCGCACAGGAATTGCGTCATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ERYLRNKDLAIGAEQ*RPLRMSHRNCVMER
Trigger: CCTCTCCATGACGCAATTCCTGTGCGACATACGTAGCGGCCGCCATTGTTCCGCGCCGATGGCGAGATCCTTGTTCCTCAGATAGCGTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416488.5
CDS-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCCAGACCAGGAGTCCCTaGGCCCAAGATGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: STCILLTDLWVESTEDQAQTRSP*AQDGFL
Trigger: CAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTG...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGGCCCTCACCAGACACCAAACCTGCCAGCACCTTGGCTTTGGACTTTCCAGCCGGTCTGATTTGGAACTaGGGCCTGCACCATACACAG +
Preference number: 5 (lower is better)
Translates to: RPSPDTKPASTLALDFPAGLIWN*GLHHTQ
Trigger: CTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACC...GGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGTGAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR CAA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGACTTGAGGACAGGAGTTaGAGACTAGCCTGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PIWGDVISPLGYMEATGGLEDRS*RLAWPG
Trigger: GCCAGGCCAGGCTAGTCTCAAACTCCTGTCCTCAAG...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS TCA 90 bp CAGGAGTCCCTTGGCCCAAGATGGATTCCTGACCTTGGAGCTTTCTaGTCCTATCCCATGAACTGTTTCGTTCTTGGAGAGGTGGGACCC +
Preference number: 5 (lower is better)
Translates to: QESLGPRWIPDLGAF*SYPMNCFVLGEVGP
Trigger: GGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAGGGACTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000536435.7
ENST00000537973.5
ENST00000539248.6
ENST00000541009.6
ENST00000541211.6
ENST00000542986.6
CDS-3UTR CAA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGACTCGGCTGGCCCGTaGACCACGACGGGCGATGAA +
Preference number: 5 (lower is better)
Translates to: SSMNTDNCILATLLAVPNDSAGP*TTTGDE
Trigger: TTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACAGACTCGGCTGGCCCGTaGACCACGACGGGCGATGAA +
Preference number: 5 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTDSAGP*TTTGDE
Trigger: TTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTC...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS CCA 90 bp AAGCACAGAGCAGGCCCTCACCAGACACCAAACCTGCCAGCACCTTaGCTTTGGACTTTCCAGCCTTCAAAATTGGACAGGTCTGATTTG +
Preference number: 5 (lower is better)
Translates to: KHRAGPHQTPNLPAP*LWTFQPSKLDRSDL
Trigger: CAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGTGAGGGCCTGCTCTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS-3UTR CAA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATGACTCGGCTGGCCCGTaGACCACGACGGGCGATGAA +
Preference number: 5 (lower is better)
Translates to: LHPKGFSPIYICWHISCDDSAGP*TTTGDE
Trigger: TTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTC...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS CCA 90 bp CAAACCTGCCAGCACCTTGGCTTTGGACTTTCCAGCCTTCAAAATTaGACAGGTCTGATTTGGAACTTGGGCCTGCACCATACACAGCTC +
Preference number: 5 (lower is better)
Translates to: QTCQHLGFGLSSLQN*TGLIWNLGLHHTQL
Trigger: GAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CCA 90 bp AGAGCAGGCCCTCACCAGACACCAAACCTGCCAGCACCTTGGCTTTaGACTTTCCAGCCTTCAAAATTGGACAGGTCTGATTTGGAACTT +
Preference number: 5 (lower is better)
Translates to: RAGPHQTPNLPAPWL*TFQPSKLDRSDLEL
Trigger: AAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGTGAGGGCCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGATTTTTGGCTGCTCTaGGGAAATAAACAGCCACTC +
Preference number: 5 (lower is better)
Translates to: STCILLTDLWVESTEDQADFWLL*GNKQPL
Trigger: GAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCAAGATGATATCAGGTTaGGTGTGTTGGTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: STCILLTDLWVESTEDQAKMISG*VCWYPR
Trigger: CCTAGGGTACCAACACACCAAACCTGATATCATCTT...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCTGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: STCILLTDLWVESTEDQACIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGATCATCAATTTTCCAGACTGTGTCTCCAGAGGATGCAGCAACAAGGCGTCATTCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: RSSIFQTVSPEDAATRRHSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...ATGACGCCTTGTTGCTGCATCCTCTGGAGACACAGTCTGGAAAATTGATGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR CAA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATCAGACCAGGAGTCCCTaGGCCCAAGATGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHQTRSP*AQDGFL
Trigger: CAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTG...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCTGTTCCAGGGAGAGGTaGCAGACCAGGAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGCSRER*QTRSPL
Trigger: CAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAACA...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AGATCATCAATTTTCCAGACTGTGTCTCCAGAGGATGCAGCAACAAGGCGTCATAAACCTGCCAGCACCTaGGCTTTGGACTTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RSSIFQTVSPEDAATRRHKPAST*ALDFPA
Trigger: GGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTT...ATGACGCCTTGTTGCTGCATCCTCTGGAGACACAGTCTGGAAAATTGATGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACCTTGTCTAGCCTGCTaGCAGTACCTGCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKPCLAC*QYLHSA
Trigger: AGCAGAATGCAGGTACTGCAAGCAGGCTAGACAAGG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTTCCTCCCTCCGACCCTaGACAACCACCAATATGCTC +
Preference number: 5 (lower is better)
Translates to: LAICLSDSSMSCMASELASSLRP*TTTNML
Trigger: GAGCATATTGGTGGTTGTCAAGGGTCGGAGGGAGGA...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS TCA 90 bp GCCCAAGATGGATTCCTGACCTTGGAGCTTTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAGAGGTGGGACCCAAATAGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: AQDGFLTLELSDPIP*TVSFLERWDPNRSC
Trigger: ACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000536435.7
ENST00000537973.5
ENST00000539248.6
ENST00000541009.6
ENST00000541211.6
ENST00000542986.6
CDS TCA 90 bp AGCACCTTGGCTTTGGACTTTCCAGCCTTCAAAATTGGACAGGTCTaGTTTGGAACTTGGGCCTGCACCATACACAGCTCTTCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: STLALDFPAFKIGQV*FGTWACTIHSSSPC
Trigger: ACAAGGAGAAGAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CCA 90 bp TCTAGCAGCTGCCACTCCCAGGACTTGGTGATTTTTGGCTGCTCTTaGGAAATAAACAGCCACTCTAGGACTTTCTCTATTCTGCGACTC +
Preference number: 5 (lower is better)
Translates to: SSSCHSQDLVIFGCS*EINSHSRTFSILRL
Trigger: GAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATCACCAAGTCCTGGGAGTGGCAGCTGCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542986.6
CDS-3UTR CAA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTGACTCGGCTGGCCCGTaGACCACGACGGGCGATGAA +
Preference number: 5 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGDSAGP*TTTGDE
Trigger: TTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTC...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536899.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATTCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGTCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAAAGGTCCCCAGGACTaGGTGATTTTTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKKGPQD*VIFGCS
Trigger: AGAGCAGCCAAAAATCACCAAGTCCTGGGGACCTTT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGTACCTGCATTCTGCTCACAGACCTCTGGGTTGAATCCACAGAGGACCAGGCCGCCCATATACATTTGTaGGCACATAAGTTGCGATTT +
Preference number: 5 (lower is better)
Translates to: STCILLTDLWVESTEDQAAHIHL*AHKLRF
Trigger: AAATCGCAACTTATGTGCCAACAAATGTATATGGGC...GGCCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGAGCAGAATGCAGGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTGCAGTGGTGCAATCTaGGCTCACTGCAACTGCCAC +
Preference number: 5 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQECSGAI*AHCNCH
Trigger: GTGGCAGTTGCAGTGAGCCAAGATTGCACCACTGCA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACTCACAGACCTCTGGGTaGAATCCACAGAGGACCAGG +
Preference number: 5 (lower is better)
Translates to: SSMNTDNCILATLLAVPNSQTSG*NPQRTR
Trigger: CCTGGTCCTCTGTGGATTCAACCCAGAGGTCTGTGA...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGATGGAAAATCGTAAGATaGAATTTCAGGGGTTCACTG +
Preference number: 5 (lower is better)
Translates to: PIWGDVISPLGYMEATGGWKIVR*NFRGSL
Trigger: CAGTGAACCCCTGAAATTCAATCTTACGATTTTCCA...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CCAATCTGGGGCGATGTCATCTCACCTTTGGGATACATGGAGGCCACAGGAGGAAGTCCTCTGCCCATTTaGATATTGGGTTGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: PIWGDVISPLGYMEATGGSPLPI*ILGCLF
Trigger: AAAAAGACAACCCAATATCAAAATGGGCAGAGGACT...TCCTCCTGTGGCCTCCATGTATCCCAAAGGTGAGATGACATCGCCCCAGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGACTCGGCTGGCCCGTaGACCACGACGGGCGATGAA +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEIDSAGP*TTTGDE
Trigger: TTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LHPKGFSPIYICWHISCDSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGTCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
CDS-3UTR CAA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTGTTCCAGGGAGAGGTaGCAGACCAGGAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFCSRER*QTRSPL
Trigger: CAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAACA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGTGTTCCAGGGAGAGGTaGCAGACCAGGAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMCSRER*QTRSPL
Trigger: CAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAACA...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGAAACCTGCCAGCACCTaGGCTTTGGACTTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKKPAST*ALDFPA
Trigger: GGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTT...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACCAGTCCAGGTCAAAGTaGGGGATGAACAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: SSMNTDNCILATLLAVPNQSRSK*GMNSTC
Trigger: ACAGGTGCTGTTCATCCCCAACTTTGACCTGGACTG...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGAGAAATTGGAAGCCTaGTGCACTGCTGGTGGAATG +
Preference number: 5 (lower is better)
Translates to: LAICLSDSSMSCMASELAEKLEA*CTAGGM
Trigger: CATTCCACCAGCAGTGCACAAGGCTTCCAATTTCTC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCAGTATGTGACCTTTTaGTGGCCAGCCTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LAICLSDSSMSCMASELAQYVTF*WPASFC
Trigger: GCAGAAAGAGGCTGGCCACAAAAAGGTCACATACTG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS CCA 90 bp TTTGGTGTGTTGGTACCCCAGGACTTGGTGATTTTTGGCTGCTCTTaGGAAATAAACAGCCACTCTAGGACTTTCTCTATTCTGCGACTC +
Preference number: 5 (lower is better)
Translates to: FGVLVPQDLVIFGCS*EINSHSRTFSILRL
Trigger: GAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATCACCAAGTCCTGGGGTACCAACACACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541211.6
CDS-3UTR CAA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATGGTCTGATTTGGAACTaGGGCCTGCACCATACACAG +
Preference number: 5 (lower is better)
Translates to: LHPKGFSPIYICWHISCDGLIWN*GLHHTQ
Trigger: CTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACC...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATCAAACCTGCCAGCACCTaGGCTTTGGACTTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FCRTSQLVFIFLMPIHKIKPAST*ALDFPA
Trigger: GGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTT...GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAAAAGCATTCCCCTCTaGACCACTCCAGAATTCTGT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKKSIPL*TTPEFC
Trigger: ACAGAATTCTGGAGTGGTCAAGAGGGGAATGCTTTT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAAGTATGTGGAGAAATaGGAAGCCTTGTGCACTGCT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKKYVEK*EALCTA
Trigger: AGCAGTGCACAAGGCTTCCAATTTCTCCACATACTT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGATGGATTCCTGACCTaGGAGCTTTCTGATCCTATC +
Preference number: 5 (lower is better)
Translates to: SSMNTDNCILATLLAVPNDGFLT*ELSDPI
Trigger: GATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTCAGACCAGGAGTCCCTaGGCCCAAGATGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFQTRSP*AQDGFL
Trigger: CAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTG...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTCAGACCAGGAGTCCCTaGGCCCAAGATGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: FFAHIHLLAHKLRFLIDGQTRSP*AQDGFL
Trigger: CAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTG...ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGGGTCTGATTTGGAACTaGGGCCTGCACCATACACAG +
Preference number: 5 (lower is better)
Translates to: SAFKAFCRTSQLVFIFLMGLIWN*GLHHTQ
Trigger: CTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACC...CATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATTTTCCAGACTGTGTTaGGACAGGTCTGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKFSRLC*DRSDLE
Trigger: TTCCAAATCAGACCTGTCCAAACACAGTCTGGAAAA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTCATGGGCCAAGTTTCTaGCTTAAAAGACTTCCATCC +
Preference number: 5 (lower is better)
Translates to: LAICLSDSSMSCMASELAHGPSF*LKRLPS
Trigger: GGATGGAAGTCTTTTAAGCAAGAAACTTGGCCCATG...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGCTTGAGCCCAGGAGTTaGAAACCAGACTGGAAAACA +
Preference number: 5 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQELEPRS*KPDWKT
Trigger: TGTTTTCCAGTCTGGTTTCAAACTCCTGGGCTCAAG...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAACCAATATGCTCTCTTaGGATTTACCCATTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKTNMLS*DLPILG
Trigger: ACCCAGAATGGGTAAATCCAAAGAGAGCATATTGGT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS CCA 90 bp AATTTTCCAGACTGTGTCCAGGACTTGGTGATTTTTGGCTGCTCTTaGGAAATAAACAGCCACTCTAGGACTTTCTCTATTCTGCGACTC +
Preference number: 5 (lower is better)
Translates to: NFPDCVQDLVIFGCS*EINSHSRTFSILRL
Trigger: GAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATCACCAAGTCCTGGACACAGTCTGGAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539248.6
CDS-3UTR CAA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCATCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: PIYICWHISCDFLLTVFPSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCCAGACCAGGAGTCCCTaGGCCCAAGATGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEIQTRSP*AQDGFL
Trigger: CAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTG...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTGTTCCAGGGAGAGGTaGCAGACCAGGAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEICSRER*QTRSPL
Trigger: CAAGGGACTCCTGGTCTGCAACCTCTCCCTGGAACA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATTGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHCIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAATTGTTGGCACATAAGTaGCGATTTCTTATTGACGGT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKLLAHK*RFLIDG
Trigger: ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAA...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGAAACCTGCCAGCACCTaGGCTTTGGACTTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLKPAST*ALDFPA
Trigger: GGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTT...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCCCTGAGCAGGGCATCTaGAATGGTGGTTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: FRNICSIESAYSSKIALIPEQGI*NGGSLM
Trigger: CATGAGGGAACCACCATTCAAGATGCCCTGCTCAGG...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACCTTGTTTTCACACCTaGGCTAGATGTTACTCATTT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKPCFHT*ARCYSF
Trigger: AAATGAGTAACATCTAGCCAAGGTGTGAAAACAAGG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCATCAGGTTTGGTGTGTaGGTACCCCAAATAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGIRFGV*VPQIEA
Trigger: AGCTTCTATTTGGGGTACCAACACACCAAACCTGAT...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542711.6
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYSLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTCCCTACGGTCAGTTTaGTGTGCCTCGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEISLRSV*CASLEV
Trigger: CACTTCCAGCGAGGCACACAAAACTGACCGTAGGGA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATGATGGATTCCTGACCTaGGAGCTTTCTGATCCTATC +
Preference number: 5 (lower is better)
Translates to: KAFCRTSQLVFIFLMPIHDGFLT*ELSDPI
Trigger: GATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATC...ATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAAAGGTCCCCAGGACTaGGTGATTTTTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPKGPQD*VIFGCS
Trigger: AGAGCAGCCAAAAATCACCAAGTCCTGGGGACCTTT...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR CAA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGAAGATGATATCAGGTTaGGTGTGTTGGTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKKMISG*VCWYPR
Trigger: CCTAGGGTACCAACACACCAAACCTGATATCATCTT...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGGTCTGATTTGGAACTaGGGCCTGCACCATACACAG +
Preference number: 5 (lower is better)
Translates to: FRNICSIESAYSSKIALIGLIWN*GLHHTQ
Trigger: CTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACGGTCTGATTTGGAACTaGGGCCTGCACCATACACAG +
Preference number: 5 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYGLIWN*GLHHTQ
Trigger: CTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACC...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp CTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATTTTTCCAGACTGTGTTaGGACAGGTCTGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LTTAASKGFFAHIHLLAHFSRLC*DRSDLE
Trigger: TTCCAAATCAGACCTGTCCAAACACAGTCTGGAAAA...ATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000542711.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: LHPKGFSPIYICWHISCDCIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: QSFLPYFPACLYFPDANPCIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCTGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: CIQSFLPYFPACLYFPDACIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAAAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKSCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTCTGACAACTGCATACTaGCTACTCTACTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFLTTAY*LLYWQF
Trigger: GAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAG...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACGAAATCGTACCTCTATaGAGGTTTCCACTAGTCATC +
Preference number: 5 (lower is better)
Translates to: SSMNTDNCILATLLAVPNEIVPL*RFPLVI
Trigger: GATGACTAGTGGAAACCTCAATAGAGGTACGATTTC...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCAGTGACAAACAGACCTaGCTTCTACTCAGGACCCGG +
Preference number: 5 (lower is better)
Translates to: FRNICSIESAYSSKIALISDKQT*LLLRTR
Trigger: CCGGGTCCTGAGTAGAAGCAAGGTCTGTTTGTCACT...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGTGCAAGCACACACCTaGTCTAGCCTGCTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: FRNICSIESAYSSKIALIVQAHT*SSLLAV
Trigger: TACTGCAAGCAGGCTAGACAAGGTGTGTGCTTGCAC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACTATGGCCATCTACTTaGCCTTTTATTATCTCTATC +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKLWPST*PFIISI
Trigger: GATAGAGATAATAAAAGGCAAAGTAGATGGCCATAG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TTAGCAATATGCCTATCAGATTCATCCATGTCCTGCATGGCCTCAGAGCTTGCTGTCACTGAGCATTATTaGGTATGCTTATTTGCCATC +
Preference number: 5 (lower is better)
Translates to: LAICLSDSSMSCMASELAVTEHY*VCLFAI
Trigger: GATGGCAAATAAGCATACCAAATAATGCTCAGTGAC...AGCAAGCTCTGAGGCCATGCAGGACATGGATGAATCTGATAGGCATATTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CTTCCACACACACCCAGCATAATTTCACCAAGCAGAGGGAGTACACTCTCCAAACTGCCCATTTTGATATaGGGTTGTCTTTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: LPHTPSIISPSRGSTLSKLPILI*GCLFVV
Trigger: AACAACAAAAAGACAACCCAATATCAAAATGGGCAG...TTTGGAGAGTGTACTCCCTCTGCTTGGTGAAATTATGCTGGGTGTGTGTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTACAGGTGTGTGGCCTaGTGCTGGGTTCTCAGCACA +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYYRCVA*CWVLST
Trigger: TGTGCTGAGAACCCAGCACAAGGCCACACACCTGTA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp GCTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGAAGATGATATCAGGTTaGGTGTGTTGGTACCCCAAA +
Preference number: 5 (lower is better)
Translates to: AFSQQLHPKGFSPIYICWKMISG*VCWYPK
Trigger: TTTGGGGTACCAACACACCAAACCTGATATCATCTT...CCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542711.6
CDS TCA 90 bp AAATCACAGACAACCTGGAACAAACAGCTTGAGATTCAGAGATTCTaGAGAACGGGAAAGATTTGGTTTGGAGGTAGCATGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: KSQTTWNKQLEIQRF*RTGKIWFGGSMMKL
Trigger: CAGCTTCATCATGCTACCTCCAAACCAAATCTTTCCCGTTCTTCAGAATCTCTGAATCTCAAGCTGTTTGTTCCAGGTTGTCTGTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534953.1
ENST00000585488.1
CDS-3UTR CAA 90 bp TTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTAGATGGATTCCTGACCTaGGAGCTTTCTGATCCTATC +
Preference number: 5 (lower is better)
Translates to: FPNVVHSKLFAVLPSLSLDGFLT*ELSDPI
Trigger: GATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATC...TAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTGATTTTTGGCTGCTCTaGGGAAATAAACAGCCACTC +
Preference number: 5 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFDFWLL*GNKQPL
Trigger: GAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATC...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTACAAAGGTCCCCAGGACTaGGTGATTTTTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SFHACHIYEVFVLKDTLYKGPQD*VIFGCS
Trigger: AGAGCAGCCAAAAATCACCAAGTCCTGGGGACCTTT...GTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGAAGATGATATCAGGTTaGGTGTGTTGGTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: CSAFKAFCRTSQLVFIFLKMISG*VCWYPR
Trigger: CCTAGGGTACCAACACACCAAACCTGATATCATCTT...CAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGATCAAGATGATATCAGGTTaGGTGTGTTGGTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: FCRTSQLVFIFLMPIHKIKMISG*VCWYPR
Trigger: CCTAGGGTACCAACACACCAAACCTGATATCATCTT...GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGGTCTGATTTGGAACTaGGGCCTGCACCATACACAG +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEIGLIWN*GLHHTQ
Trigger: CTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
CDS-3UTR CAA 90 bp AAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATTGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: KAFCRTSQLVFIFLMPIHCIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...ATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp CTTTCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCTTGTTGGCACATAAGTaGCGATTTCTTATTGACGGT +
Preference number: 5 (lower is better)
Translates to: LSHNSCIQRVFRPYTFVGLLAHK*RFLIDG
Trigger: ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAA...GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TCTCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATTGTTGGCACATAAGTaGCGATTTCTTATTGACGGT +
Preference number: 5 (lower is better)
Translates to: SHNSCIQRVFRPYTFVGTLLAHK*RFLIDG
Trigger: ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAA...TGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCGCCCATATACATTaGTTGGCACATAAGTTGCGA +
Preference number: 5 (lower is better)
Translates to: LHPKGFSPIYICWHISCDFAHIH*LAHKLR
Trigger: TCGCAACTTATGTGCCAACAAATGTATATGGGCGAA...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATTCGCCCATATACATTaGTTGGCACATAAGTTGCGA +
Preference number: 5 (lower is better)
Translates to: QSFLPYFPACLYFPDANPFAHIH*LAHKLR
Trigger: TCGCAACTTATGTGCCAACAAATGTATATGGGCGAA...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCCAGCCTTCAAAATaGGACAGGTCTGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LHPKGFSPIYICWHISCDFQPSK*DRSDLE
Trigger: TTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAA...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CAA 90 bp CAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATTCCAGCCTTCAAAATaGGACAGGTCTGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: QSFLPYFPACLYFPDANPFQPSK*DRSDLE
Trigger: TTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAA...TGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGATGTCATCTCACCTTaGGGATACATGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: FRNICSIESAYSSKIALIDVISP*GYMEAT
Trigger: TGTGGCCTCCATGTATCCCAAAGGTGAGATGACATC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCCTCAGAGCTTGCTCTaGCTGAACAGGACTCCATTG +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYPQSLL*LNRTPL
Trigger: CAATGGAGTCCTGTTCAGCAAGAGCAAGCTCTGAGG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTTGCCACTCCCAGGACTaGGTGATTTTTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLCHSQD*VIFGCS
Trigger: AGAGCAGCCAAAAATCACCAAGTCCTGGGAGTGGCA...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542986.6
CDS-3UTR CAA 90 bp GCTTTTTGCCGTACTTCCCAGCTTGTCTTTATTTTCCTGATGCCAATCCATAAGAAGATGATATCAGGTTaGGTGTGTTGGTACCCCAAA +
Preference number: 5 (lower is better)
Translates to: AFCRTSQLVFIFLMPIHKKMISG*VCWYPK
Trigger: TTTGGGGTACCAACACACCAAACCTGATATCATCTT...CTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR CAA 90 bp TTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTAAAGATGATATCAGGTTaGGTGTGTTGGTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: FPNVVHSKLFAVLPSLSLKMISG*VCWYPR
Trigger: CCTAGGGTACCAACACACCAAACCTGATATCATCTT...TAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TCACAACAGCTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAGCCCATATACATTTGTaGGCACATAAGTTGCGATTT +
Preference number: 5 (lower is better)
Translates to: SQQLHPKGFSPIYICWHIAHIHL*AHKLRF
Trigger: AAATCGCAACTTATGTGCCAACAAATGTATATGGGC...TATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp GCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTTTCGCCCATATACATTaGTTGGCACATAAGTTGCGA +
Preference number: 5 (lower is better)
Translates to: ASKGFFAHIHLLAHKLRFFAHIH*LAHKLR
Trigger: TCGCAACTTATGTGCCAACAAATGTATATGGGCGAA...AAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTTTCGCCCATATACATTaGTTGGCACATAAGTTGCGA +
Preference number: 5 (lower is better)
Translates to: SFPNVVHSKLFAVLPSLSFAHIH*LAHKLR
Trigger: TCGCAACTTATGTGCCAACAAATGTATATGGGCGAA...AGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTCTCGTTGTTTTAATTaGCTTTTCCCTCATGACAAG +
Preference number: 5 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQESRCFN*LFPHDK
Trigger: CTTGTCATGAGGGAAAAGCAAATTAAAACAACGAGA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGAAGCTTTGTTTAGCTTaGGGGAAAAGTCAAACTATC +
Preference number: 5 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQEKLCLA*GKSQTI
Trigger: GATAGTTTGACTTTTCCCCAAAGCTAAACAAAGCTT...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ATGGCATGGAAAATCGTAAGATTGAATTTCAGGGGTTCACTGGGACTGCAAGAGTCATATTGTGAAGCTTaGTTTAGCTTTGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: MAWKIVRLNFRGSLGLQESYCEA*FSFGEK
Trigger: CTTTTCCCCAAAGCTAAACAAAGCTTCACAATATGA...CTCTTGCAGTCCCAGTGAACCCCTGAAATTCAATCTTACGATTTTCCATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTGGAATTTTGCTTTCTaGCTCTGTCACCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYWNFAF*LCHLGW
Trigger: CCAGCCCAGGTGACAGAGCAAGAAAGCAAAATTCCA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCCTCCATGAATACTGACAACTGCATACTTGCTACTCTACTGGCAGTTCCAAACCATTTCTCCACTTCTTaGTCAATACTTGTTTCTGGT +
Preference number: 5 (lower is better)
Translates to: SSMNTDNCILATLLAVPNHFSTS*SILVSG
Trigger: ACCAGAAACAAGTATTGACAAAGAAGTGGAGAAATG...GTTTGGAACTGCCAGTAGAGTAGCAAGTATGCAGTTGTCAGTATTCATGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCATCAGGTTTGGTGTGTaGGTACCCCAAATAGAAGCT +
Preference number: 5 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPIRFGV*VPQIEA
Trigger: AGCTTCTATTTGGGGTACCAACACACCAAACCTGAT...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588312.2
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGATGGATTCCTGACCTaGGAGCTTTCTGATCCTATC +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEIDGFLT*ELSDPI
Trigger: GATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp ACTAGTGAAATCTATATATTTCAAACTCTTTCCATGCGTGCCACATTTATGAGGGATGGATTCCTGACCTaGGAGCTTTCTGATCCTATC +
Preference number: 5 (lower is better)
Translates to: TSEIYIFQTLSMRATFMRDGFLT*ELSDPI
Trigger: GATAGGATCAGAAAGCTCCAAGGTCAGGAATCCATC...CCTCATAAATGTGGCACGCATGGAAAGAGTTTGAAATATATAGATTTCACTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTGATTTTTGGCTGCTCTaGGGAAATAAACAGCCACTC +
Preference number: 5 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFDFWLL*GNKQPL
Trigger: GAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATC...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CTGCATCCAAAGGGTTTTTCGCCCATATACATTTGTTGGCACATAAGTTGCGATAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: LHPKGFSPIYICWHISCDSCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...ATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGCTTGTCTGCCCATATACATTTGTaGGCACATAAGTTGCGATTT +
Preference number: 5 (lower is better)
Translates to: SFPNVVHSKLFAVLPSLSAHIHL*AHKLRF
Trigger: AAATCGCAACTTATGTGCCAACAAATGTATATGGGC...AGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCTTCGCCCATATACATTaGTTGGCACATAAGTTGCGA +
Preference number: 5 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPFAHIH*LAHKLR
Trigger: TCGCAACTTATGTGCCAACAAATGTATATGGGCGAA...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGACTTCCATCCTGTCTaGGGAAACAACCATTTCCAA +
Preference number: 5 (lower is better)
Translates to: FRNICSIESAYSSKIALIDFHPV*GNNHFQ
Trigger: TTGGAAATGGTTGTTTCCCAAGACAGGATGGAAGTC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGGCAGTTCCAAACATTaGTTTGTGGTTTATTTTGGG +
Preference number: 5 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFGSSKH*FVVYFG
Trigger: CCCAAAATAAACCACAAACAAATGTTTGGAACTGCC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS TCA 90 bp TACCCTATAAATAGAAAAATCACAGACAACCTGGAACAAACAGCTTaGGATTCAGAGATTCTGAAGAACGGGAAAGATTTGGTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: YPINRKITDNLEQTA*DSEILKNGKDLVWR
Trigger: CCTCCAAACCAAATCTTTCCCGTTCTTCAGAATCTCTGAATCTCAAGCTGTTTGTTCCAGGTTGTCTGTGATTTTTCTATTTATAGGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534953.1
ENST00000585488.1
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCGATTTTTGGCTGCTCTaGGGAAATAAACAGCCACTC +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEIDFWLL*GNKQPL
Trigger: GAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATC...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539248.6
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGATTTTTGGCTGCTCTaGGGAAATAAACAGCCACTC +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYDFWLL*GNKQPL
Trigger: GAGTGGCTGTTTATTTCCCAAGAGCAGCCAAAAATC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536435.7
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCAAGATGATATCAGGTTaGGTGTGTTGGTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEIKMISG*VCWYPR
Trigger: CCTAGGGTACCAACACACCAAACCTGATATCATCTT...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEICIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536899.6
ENST00000539248.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000591951.1
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTGCATTCAAAGCTTTTaGCCGTACTTCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYCIQSF*PYFPAC
Trigger: ACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CAA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGTTCCAGCCTTCAAAATaGGACAGGTCTGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLFQPSK*DRSDLE
Trigger: TTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAA...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTGAAGTGTGCCTTATATaGATTACTAAAGAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFEVCLI*ITKEVA
Trigger: AGCAACCTCTTTAGTAATCAATATAAGGCACACTTC...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATCTCCTTTTCACTTTCTaGATAGTGTCCACTGATGCC +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYLLFTF*IVSTDA
Trigger: GGCATCAGTGGACACTATCAAGAAAGTGAAAAGGAG...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp CGTACCTCTATTGAGGTTTCCACTAGTCATCTTTATAGCAAGCCCAACTACTTTTATTGGGTTGTCTTTTaGTTGTTGGGTTGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: RTSIEVSTSHLYSKPNYFYWVVF*LLGCKS
Trigger: ACTCTTACAACCCAACAACAAAAAGACAACCCAATA...AAAGTAGTTGGGCTTGCTATAAAGATGACTAGTGGAAACCTCAATAGAGGTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS-3UTR CAA 90 bp TCCATGTACCTGAAACCCATTAGGATTATTTCTAGCATAATCACTAGTGAAATCTTTTCCAGACTGTGTTaGGACAGGTCTGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: SMYLKPIRIISSIITSEIFSRLC*DRSDLE
Trigger: TTCCAAATCAGACCTGTCCAAACACAGTCTGGAAAA...GATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542711.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTCCCAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: RRHSFPNVVHSKLFAVLPSCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...GGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTTGTTGGCACATAAGTaGCGATTTCTTATTGACGGT +
Preference number: 5 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFLLAHK*RFLIDG
Trigger: ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAA...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp CCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTTCCATTGTTGGCACATAAGTaGCGATTTCTTATTGACGGT +
Preference number: 5 (lower is better)
Translates to: PIYICWHISCDFLLTVFPLLAHK*RFLIDG
Trigger: ACCGTCAATAAGAAATCGCAACTTATGTGCCAACAA...TGGAAAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTGCCCATATACATTTGTaGGCACATAAGTTGCGATTT +
Preference number: 5 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFAHIHL*AHKLRF
Trigger: AAATCGCAACTTATGTGCCAACAAATGTATATGGGC...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATTTCGCCCATATACATTaGTTGGCACATAAGTTGCGA +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYFAHIH*LAHKLR
Trigger: TCGCAACTTATGTGCCAACAAATGTATATGGGCGAA...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CAA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTTTCCAGCCTTCAAAATaGGACAGGTCTGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLFQPSK*DRSDLE
Trigger: TTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAA...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
CDS-3UTR CAA 90 bp TTCGCCCATATACATTTGTTGGCACATAAGTTGCGATTTCTTATTGACGGTTTTAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: FAHIHLLAHKLRFLIDGFSCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...AAAACCGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536899.6
ENST00000541009.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp AACTCTTTCCATGCGTGCCACATTTATGAGGTTTTTGTCTTGAAAGATACTTTGAGTTGCGATTTCTTATaGACGGTTTTTCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: NSFHACHIYEVFVLKDTLSCDFL*TVFPDS
Trigger: TGAATCTGGAAAAACCGTCAATAAGAAATCGCAACT...CAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp ACAGTCCAGCTGTGGTTTATTTGGTACATTCATAAGATGTTCACTCCTATATATGCCCATATACATTTGTaGGCACATAAGTTGCGATTT +
Preference number: 5 (lower is better)
Translates to: TVQLWFIWYIHKMFTPIYAHIHL*AHKLRF
Trigger: AAATCGCAACTTATGTGCCAACAAATGTATATGGGC...ATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536435.7
ENST00000536899.6
ENST00000541009.6
ENST00000542986.6
CDS-3UTR CAA 90 bp CTAAGAAGACATAGTTTTCCAAATGTAGTGCATTCAAAGCTTTTTGCCGTACTTGCCCATATACATTTGTaGGCACATAAGTTGCGATTT +
Preference number: 5 (lower is better)
Translates to: LRRHSFPNVVHSKLFAVLAHIHL*AHKLRF
Trigger: AAATCGCAACTTATGTGCCAACAAATGTATATGGGC...AAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACTATGTCTTCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541009.6
ENST00000542986.6
ENST00000546126.7
CDS-3UTR CAA 90 bp TTCAGAAATATTTGCAGTATTGAATCCGCATATTCCTCCAAGATAGCCCTAATCGTCATATCAGAGATATaGTCAGTATCAGAGATACTG +
Preference number: 5 (lower is better)
Translates to: FRNICSIESAYSSKIALIVISEI*SVSEIL
Trigger: CAGTATCTCTGATACTGACAATATCTCTGATATGAC...GATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536435.7
CDS GCA 72 bp CGGACCCTGGTGGCCATCCCTACGGTCAGTTTTGTGTaGCTCGCTGGAAGTGACAGGACGCGAGGGATGCTC +
Preference number: 6 (lower is better)
Translates to: RTLVAIPTVSFV*LAGSDRTRGML
Trigger: GAGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCACACAAAACTGACCGTAGGGATGGCCACCAGGGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000500625.7
ENST00000536435.7
ENST00000536899.6
ENST00000537973.5
ENST00000539248.6
ENST00000541009.6
ENST00000541211.6
ENST00000541975.2
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
ENST00000611984.4
CDS TCA 72 bp TCCAGACTCGGCTGGCCCGTTGACCACGACGGGCGATaGACGCTATCTGAGGAACAAGGATCTCGCCATCGG +
Preference number: 6 (lower is better)
Translates to: SRLGWPVDHDGR*TLSEEQGSRHR
Trigger: CCGATGGCGAGATCCTTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000500625.7
ENST00000536435.7
ENST00000536899.6
ENST00000537973.5
ENST00000539248.6
ENST00000541211.6
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000611984.4
CDS TCA 72 bp ACAGGACGCGAGGGATGCTCCGGCTCCTCCAAACCCTaGAGGGGCAGCAGAATAGAGTCCAGGGTACTGCCT +
Preference number: 6 (lower is better)
Translates to: TGREGCSGSSKP*RGSRIESRVLP
Trigger: AGGCAGTACCCTGGACTCTATTCTGCTGCCCCTTCAGGGTTTGGAGGAGCCGGAGCATCCCTCGCGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000416488.5
ENST00000536435.7
ENST00000536899.6
ENST00000537973.5
ENST00000539248.6
ENST00000541009.6
ENST00000541211.6
ENST00000541975.2
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
ENST00000611984.4
CDS CAA 72 bp GAAGGGTTCGCAACCACTCCAGACTCGGCTGGCCCGTaGACCACGACGGGCGATGAACGCTATCTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: EGFATTPDSAGP*TTTGDERYLRN
Trigger: GTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTGGTTGCGAACCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000500625.7
ENST00000536435.7
ENST00000536899.6
ENST00000537973.5
ENST00000539248.6
ENST00000541211.6
ENST00000541975.2
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000611984.4
CDS CAA 90 bp CTGCAGCCAGAAGGGTTCGCAACCACTCCAGACTCGGCTGGCCCGTaGACCACGACGGGCGATGAACGCTATCTGAGGAACAAGGATCTC +
Preference number: 6 (lower is better)
Translates to: LQPEGFATTPDSAGP*TTTGDERYLRNKDL
Trigger: GAGATCCTTGTTCCTCAGATAGCGTTCATCGCCCGTCGTGGTCAACGGGCCAGCCGAGTCTGGAGTGGTTGCGAACCCTTCTGGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000500625.7
ENST00000536435.7
ENST00000536899.6
ENST00000537973.5
ENST00000539248.6
ENST00000541211.6
ENST00000541975.2
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000611984.4
CDS TCA 72 bp CATCCCTACGGTCAGTTTTGTGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCTCCGGCTCCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: HPYGQFCVPRWK*QDARDAPAPPN
Trigger: GTTTGGAGGAGCCGGAGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCACACAAAACTGACCGTAGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000416488.5
ENST00000536435.7
ENST00000536899.6
ENST00000537973.5
ENST00000539248.6
ENST00000541009.6
ENST00000541211.6
ENST00000541975.2
ENST00000542711.6
ENST00000542986.6
ENST00000546126.7
ENST00000588312.2
ENST00000592241.5
ENST00000611984.4
CDS CCA 72 bp CTGAGGAACAAGGATCTCGCCATCGGCGCGGAACAATaGCGGCCGCTACGTATGTCGCACAGGAATTGCGTC +
Preference number: 6 (lower is better)
Translates to: LRNKDLAIGAEQ*RPLRMSHRNCV
Trigger: GACGCAATTCCTGTGCGACATACGTAGCGGCCGCCATTGTTCCGCGCCGATGGCGAGATCCTTGTTCCTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228289.9
ENST00000416488.5
CDS TCA 72 bp CATCCCTACGGTCAGTTTTGTGTGCCTCGCTGGAAGTaGCAGGACGCGAGGGATGCTCCAGATCTGCAGCCA +
Preference number: 6 (lower is better)
Translates to: HPYGQFCVPRWK*QDARDAPDLQP
Trigger: TGGCTGCAGATCTGGAGCATCCCTCGCGTCCTGTCACTTCCAGCGAGGCACACAAAACTGACCGTAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228289.9
ENST00000500625.7
CDS GCA 72 bp GGAAGCACAGAGCAGGCCCTCACCAGACACCAAACCTaGCAGCACCTTGGCTTTGGACTTTCCAGCCTTCAA +
Preference number: 6 (lower is better)
Translates to: GSTEQALTRHQT*QHLGFGLSSLQ
Trigger: TTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGTGAGGGCCTGCTCTGTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CCA 72 bp GCAGGCCCTCACCAGACACCAAACCTGCCAGCACCTTaGCTTTGGACTTTCCAGCCTTCAAAATTGGACAGG +
Preference number: 6 (lower is better)
Translates to: AGPHQTPNLPAP*LWTFQPSKLDR
Trigger: CCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGTGAGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CCA 72 bp AGAAGCCCTCCAGTTTTCAGCAACCAAGAAGAAGCCTaGAGATCGAGCACACTCCTCCTCAGGGAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: RSPPVFSNQEEA*RSSTLLLREAA
Trigger: TGCTGCCTCCCTGAGGAGGAGTGTGCTCGATCTCCAGGCTTCTTCTTGGTTGCTGAAAACTGGAGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585488.1
CDS CAA 90 bp CCAAACCTGCCAGCACCTTGGCTTTGGACTTTCCAGCCTTCAAAATaGGACAGGTCTGATTTGGAACTTGGGCCTGCACCATACACAGCT +
Preference number: 6 (lower is better)
Translates to: PNLPAPWLWTFQPSK*DRSDLELGPAPYTA
Trigger: AGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS TCA 72 bp GGATTCCTGACCTTGGAGCTTTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAGAGGTGGGACCTGTGG +
Preference number: 6 (lower is better)
Translates to: GFLTLELSDPIP*TVSFLERWDLW
Trigger: CCACAGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500625.7
ENST00000541975.2
CDS CCA 72 bp CCTCACCAGACACCAAACCTGCCAGCACCTTGGCTTTaGACTTTCCAGCCTTCAAAATTGGACAGGTCTGAT +
Preference number: 6 (lower is better)
Translates to: PHQTPNLPAPWL*TFQPSKLDRSD
Trigger: ATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTGGCAGGTTTGGTGTCTGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CCA 72 bp GGACTTTCCAGCCTTCAAAATTGGACAGGTCTGATTTaGAACTTGGGCCTGCACCATACACAGCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GLSSLQNWTGLI*NLGLHHTQLFS
Trigger: GGAGAAGAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CCA 72 bp CAGCACCTTGGCTTTGGACTTTCCAGCCTTCAAAATTaGACAGGTCTGATTTGGAACTTGGGCCTGCACCAT +
Preference number: 6 (lower is better)
Translates to: QHLGFGLSSLQN*TGLIWNLGLHH
Trigger: ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CAA 90 bp CCTTGGCTTTGGACTTTCCAGCCTTCAAAATTGGACAGGTCTGATTaGGAACTTGGGCCTGCACCATACACAGCTCTTCTCCTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: PWLWTFQPSKLDRSD*ELGPAPYTALLLVP
Trigger: TGGAACAAGGAGAAGAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS TCA 72 bp GGATTCCTGACCTTGGAGCTTTCTGATCCTATCCCATaGACTGTTTCGTTCTTGGAGAGGTGGGACCCAAAT +
Preference number: 6 (lower is better)
Translates to: GFLTLELSDPIP*TVSFLERWDPN
Trigger: ATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATAGGATCAGAAAGCTCCAAGGTCAGGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228289.9
ENST00000416488.5
ENST00000536435.7
ENST00000537973.5
ENST00000539248.6
ENST00000541009.6
ENST00000541211.6
ENST00000542986.6
CDS TCA 72 bp GCTTTGGACTTTCCAGCCTTCAAAATTGGACAGGTCTaGTTTGGAACTTGGGCCTGCACCATACACAGCTCT +
Preference number: 6 (lower is better)
Translates to: ALDFPAFKIGQV*FGTWACTIHSS
Trigger: AGAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS CAA 72 bp TGGACTTTCCAGCCTTCAAAATTGGACAGGTCTGATTaGGAACTTGGGCCTGCACCATACACAGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: WTFQPSKLDRSD*ELGPAPYTALL
Trigger: GAGAAGAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416488.5
ENST00000534953.1
ENST00000541009.6
ENST00000542986.6
ENST00000588312.2
ENST00000591951.1
ENST00000592241.5
ENST00000611984.4
CDS TCA 72 bp ACAACCTGGAACAAACAGCTTGAGATTCAGAGATTCTaGAGAACGGGAAAGATTTGGTTTGGAGGTAGCATG +
Preference number: 6 (lower is better)
Translates to: TTWNKQLEIQRF*RTGKIWFGGSM
Trigger: CATGCTACCTCCAAACCAAATCTTTCCCGTTCTTCAGAATCTCTGAATCTCAAGCTGTTTGTTCCAGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534953.1
ENST00000585488.1