RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF267 (Homo sapiens)

Ensembl gene IDs: ENSG00000185947

Ensembl transcript IDs: ENST00000394846.7, ENST00000561814.1, ENST00000566541.5, ENST00000575471.2

Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCTTGTTATAATGCGAAAACACATCTGTGGTGAGAAAACGAAATaGAATAACAGGGAACTTCAATGTCCTGGCTGGATGGCTACTGTC +
Preference number: 1 (lower is better)
Translates to: VLVIMRKHICGEKTK*NNRELQCPGWMATV
Trigger: GACAGTAGCCATCCAGCCAGGACATTGAAGTTCCCTGTTATTGCATTTCGTTTTCTCACCACAGATGTGTTTTCGCATTATAACAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566541.5
3UTR-3UTR TCA 90 bp CCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGCTGACAGTCACTAAACACGAGGTGACCTGGGGCTaGCAGTCACTAAACACTCCA +
Preference number: 2 (lower is better)
Translates to: PLGGPLTGGDLGLTVTKHEVTWG*QSLNTP
Trigger: TGGAGTGTTTAGTGACTGTCAGCCCCAGGTCACCTC...GTGTTTAGTGACTGTCAGCCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561814.1
ENST00000566541.5
3UTR-3UTR GCA 90 bp AATGTCAACAGTCCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGCTGACAGGAATGAAGCTTCTGTaGAGTGCTCTGTCAACAGGT +
Preference number: 2 (lower is better)
Translates to: NVNSPLGGPLTGGDLGLTGMKLL*SALSTG
Trigger: ACCTGTTGACAGAGCACTGCACAGAAGCTTCATTCC...TGTCAGCCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGGACTGTTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566541.5
3UTR-3UTR TCA 90 bp AGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGGCTGGATGGGAGGTGACCTGGGGCTaGCAGTCACTAAACACTCCA +
Preference number: 2 (lower is better)
Translates to: SALSTGPCYNAKTHLAGWEVTWG*QSLNTP
Trigger: TGGAGTGTTTAGTGACTGTCAGCCCCAGGTCACCTC...CCATCCAGCCAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561814.1
3UTR-3UTR GCA 90 bp CTTCTGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGGAAGCTTCTGTGCAGTaGTCTGTCAACAGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: LLCSALSTGPCYNAKTHLEASVQ*SVNRSL
Trigger: CAAGGACCTGTTGACAGAGCACTGCACAGAAGCTTC...CAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
3UTR-3UTR CCA 90 bp GTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTGAGAAACTTCAATGTCCTGGCTaGATGGCTACTGTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: VLCQQVLVIMRKHICGEKLQCPG*MATVSS
Trigger: TGAGGAGACAGTAGCCATCCAGCCAGGACATTGAAG...TTTCTCACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566541.5
3UTR-3UTR TCA 90 bp TGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTTATCACTTTTTGGAATaGAGCTTCTGTGCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: CAVLCQQVLVIMRKHICGYHFLE*SFCAVL
Trigger: GAGCACTGCACAGAAGCTTCATTCCAAAAAGTGATA...ACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
3UTR-3UTR TCA 90 bp CTTCTGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTATCACTTTTTGGAATaGAGCTTCTGTGCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: LLCSALSTGPCYNAKTHLYHFLE*SFCAVL
Trigger: GAGCACTGCACAGAAGCTTCATTCCAAAAAGTGATA...CAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
3UTR-3UTR CAA 90 bp TGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTAATGTCAACAGTCCCTaGGGCGGTCCTCTAACAGGA +
Preference number: 3 (lower is better)
Translates to: CAVLCQQVLVIMRKHICGNVNSP*GGPLTG
Trigger: TCCTGTTAGAGGACCGCCCAAGGGACTGTTGACATT...ACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566541.5
3UTR GCA 72 bp ATAATGCGAAAACACATCTGTGGTGAGAAAACGAAATaGAATAACAGGGAACTTCAATGTCCTGGCTGGATG +
Preference number: 3 (lower is better)
Translates to: IMRKHICGEKTK*NNRELQCPGWM
Trigger: CATCCAGCCAGGACATTGAAGTTCCCTGTTATTGCATTTCGTTTTCTCACCACAGATGTGTTTTCGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566541.5
CDS-3UTR GCA 90 bp CCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGCTGACAGTCACTAAACACGAATCTCCCAGTGCCTaGAAGTCGCAGAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: PLGGPLTGGDLGLTVTKHESPSA*KSQSNR
Trigger: TCTGTTGCTCTGCGACTTGCAGGCACTGGGAGATTC...GTGTTTAGTGACTGTCAGCCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561814.1
ENST00000566541.5
CDS-3UTR GCA 90 bp AATGTCAACAGTCCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGCTGACAGAATCTCCCAGTGCCTaGAAGTCGCAGAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: NVNSPLGGPLTGGDLGLTESPSA*KSQSNR
Trigger: TCTGTTGCTCTGCGACTTGCAGGCACTGGGAGATTC...TGTCAGCCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGGACTGTTGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561814.1
ENST00000566541.5
CDS-3UTR GCA 90 bp CCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGCTGACAGTCACTAAACACGGAATGAAGCTTCTGTaGAGTGCTCTGTCAACAGGT +
Preference number: 4 (lower is better)
Translates to: PLGGPLTGGDLGLTVTKHGMKLL*SALSTG
Trigger: ACCTGTTGACAGAGCACTGCACAGAAGCTTCATTCC...GTGTTTAGTGACTGTCAGCCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566541.5
CDS-3UTR CCA 90 bp TCCCTGAATGTCAACAGTCCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGGAAAACACATCTGGCTaGATGGCTACTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLNVNSPLGGPLTGGDLGENTSG*MATVSS
Trigger: TGAGGAGACAGTAGCCATCCAGCCAGATGTGTTTTC...CCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGGACTGTTGACATTCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561814.1
CDS-3UTR CCA 90 bp TCCCTGAATGTCAACAGTCCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGGGAACAGGAAAAGACTaGATAGAGGGTGGCTATACA +
Preference number: 4 (lower is better)
Translates to: SLNVNSPLGGPLTGGDLGGTGKD*IEGGYT
Trigger: TGTATAGCCACCCTCTATCCAGTCTTTTCCTGTTCC...CCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGGACTGTTGACATTCAGGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561814.1
CDS-3UTR CCA 90 bp CCTCTAACAGGAGGTGACCTGGGGCTGACAGTCACTAAACACTCCAGGAGACATCTTCAATGTCCTGGCTaGATGGCTACTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PLTGGDLGLTVTKHSRRHLQCPG*MATVSS
Trigger: TGAGGAGACAGTAGCCATCCAGCCAGGACATTGAAG...ATGTCTCCTGGAGTGTTTAGTGACTGTCAGCCCCAGGTCACCTCCTGTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566541.5
CDS-3UTR TCA 90 bp CTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGGCTGGATGGCTACTGGAGGTGACCTGGGGCTaGCAGTCACTAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: LSTGPCYNAKTHLAGWLLEVTWG*QSLNTP
Trigger: TGGAGTGTTTAGTGACTGTCAGCCCCAGGTCACCTC...CAGTAGCCATCCAGCCAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561814.1
CDS-3UTR CCA 90 bp TGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTAAAGACTCGGAGCTGTaGCGAGGAGACCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CAVLCQQVLVIMRKHICGKDSEL*RGDPSS
Trigger: AGAGCTCGGGTCTCCTCGCCACAGCTCCGAGTCTTT...ACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394846.7
CDS-3UTR TCA 90 bp CTTCTGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGGAGGTGACCTGGGGCTaGCAGTCACTAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: LLCSALSTGPCYNAKTHLEVTWG*QSLNTP
Trigger: TGGAGTGTTTAGTGACTGTCAGCCCCAGGTCACCTC...CAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561814.1
ENST00000566541.5
CDS-3UTR CCA 90 bp CTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGGCTGGATGGCTACTGAGACTGGATAGAGGGTaGCTATACAGGGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LSTGPCYNAKTHLAGWLLRLDRG*LYRAHF
Trigger: GAAATGGGCCCTGTATAGCCACCCTCTATCCAGTCT...CAGTAGCCATCCAGCCAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561814.1
CDS-3UTR CCA 90 bp CTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGGCTGGATGGCTACTGATGCGAAAACACATCTaGCTGGATGGCTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSTGPCYNAKTHLAGWLLMRKHI*LDGYCL
Trigger: GAGACAGTAGCCATCCAGCCAGATGTGTTTTCGCAT...CAGTAGCCATCCAGCCAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561814.1
CDS-3UTR CCA 90 bp TGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTGGAACTTCAATGTCCTaGCTGGATGGCTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: CAVLCQQVLVIMRKHICGGTSMS*LDGYCL
Trigger: GAGACAGTAGCCATCCAGCCAGGACATTGAAGTTCC...ACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
CDS-3UTR GCA 90 bp GTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTGAGAAAGAAGCTTCTGTGCAGTaGTCTGTCAACAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VLCQQVLVIMRKHICGEKEASVQ*SVNRSL
Trigger: CAAGGACCTGTTGACAGAGCACTGCACAGAAGCTTC...TTTCTCACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
CDS-3UTR CCA 90 bp GTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTGAGAAAGGAACTTCAATGTCCTaGCTGGATGGCTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: VLCQQVLVIMRKHICGEKGTSMS*LDGYCL
Trigger: GAGACAGTAGCCATCCAGCCAGGACATTGAAGTTCC...TTTCTCACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
CDS-3UTR GCA 90 bp TTCTGTGCAGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGAATGAAGCTTCTGTaGAGTGCTCTGTCAACAGGT +
Preference number: 4 (lower is better)
Translates to: FCAVLCQQVLVIMRKHICGMKLL*SALSTG
Trigger: ACCTGTTGACAGAGCACTGCACAGAAGCTTCATTCC...ACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACTGCACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
CDS-3UTR GCA 90 bp GTCCTTGTTATAATGCGAAAACACATCTGTGGTGAGAAAACGAAATGCAATAACGAATCTCCCAGTGCCTaGAAGTCGCAGAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: VLVIMRKHICGEKTKCNNESPSA*KSQSNR
Trigger: TCTGTTGCTCTGCGACTTGCAGGCACTGGGAGATTC...GTTATTGCATTTCGTTTTCTCACCACAGATGTGTTTTCGCATTATAACAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
CDS-3UTR TCA 90 bp GTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGTGGTGAGAAATATCACTTTTTGGAATaGAGCTTCTGTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: VLCQQVLVIMRKHICGEKYHFLE*SFCAVL
Trigger: GAGCACTGCACAGAAGCTTCATTCCAAAAAGTGATA...TTTCTCACCACAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
CDS-3UTR CCA 90 bp GTCCTTGTTATAATGCGAAAACACATCTGTGGTGAGAAAACGAAATGCAATAACCTTCAATGTCCTGGCTaGATGGCTACTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VLVIMRKHICGEKTKCNNLQCPG*MATVSS
Trigger: TGAGGAGACAGTAGCCATCCAGCCAGGACATTGAAG...GTTATTGCATTTCGTTTTCTCACCACAGATGTGTTTTCGCATTATAACAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394846.7
ENST00000566541.5
CDS CCA 90 bp AACATCAGTGATAGCCCAGTGGAAACCCCTGTGGGCTGGTGGTGGTaGCAGACACATTGTGAGGCTCCTCTGCCTGCAGAAAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: NISDSPVETPVGWWW*QTHCEAPLPAERGG
Trigger: CCCTCCCCTTTCTGCAGGCAGAGGAGCCTCACAATGTGTCTGCCACCACCACCAGCCCACAGGGGTTTCCACTGGGCTATCACTGATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 90 bp GTGAACATCAGTGATAGCCCAGTGGAAACCCCTGTGGGCTGGTGGTaGTGGCAGACACATTGTGAGGCTCCTCTGCCTGCAGAAAGGGGA +
Preference number: 5 (lower is better)
Translates to: VNISDSPVETPVGWW*WQTHCEAPLPAERG
Trigger: TCCCCTTTCTGCAGGCAGAGGAGCCTCACAATGTGTCTGCCACCACCACCAGCCCACAGGGGTTTCCACTGGGCTATCACTGATGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS-3UTR CAA 90 bp CCCTTGGGCGGTCCTCTAACAGGAGGTGACCTGGGGCTGACAGTCACTAAACACAATGTCAACAGTCCCTaGGGCGGTCCTCTAACAGGA +
Preference number: 5 (lower is better)
Translates to: PLGGPLTGGDLGLTVTKHNVNSP*GGPLTG
Trigger: TCCTGTTAGAGGACCGCCCAAGGGACTGTTGACATT...GTGTTTAGTGACTGTCAGCCCCAGGTCACCTCCTGTTAGAGGACCGCCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561814.1
ENST00000566541.5
CDS TCA 90 bp GCATGGCGGGGAGAAATCTGTTCATTTGGGAGACGGAGAGCACAGTaGCTAGGGGACTACAATGAACCCAGTGCTGCCCTATCACAGCAG +
Preference number: 5 (lower is better)
Translates to: AWRGEICSFGRRRAQ*LGDYNEPSAALSQQ
Trigger: CTGCTGTGATAGGGCAGCACTGGGTTCATTGTAGTCCCCTAGTCACTGTGCTCTCCGTCTCCCAAATGAACAGATTTCTCCCCGCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS GCA 90 bp GACACCAACAGTGAAGGAAAGGGAGTGCTTGTGCCACCTTGCCCTTaGCCCTCAGCAGCATCTGCATGGCGGGGAGAAATCTGTTCATTT +
Preference number: 5 (lower is better)
Translates to: DTNSEGKGVLVPPCP*PSAASAWRGEICSF
Trigger: AAATGAACAGATTTCTCCCCGCCATGCAGATGCTGCTGAGGGGCAAGGGCAAGGTGGCACAAGCACTCCCTTTCCTTCACTGTTGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 90 bp CAGTGCTGTGCTCACTTCAAGTCTAAATTAGCACAGTCCCAGTGGTaGGGGCAACAGGGAAGCTTATGTCATCCCACCCCAGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QCCAHFKSKLAQSQW*GQQGSLCHPTPAPG
Trigger: ACCTGGAGCTGGGGTGGGATGACATAAGCTTCCCTGTTGCCCCCACCACTGGGACTGTGCTAATTTAGACTTGAAGTGAGCACAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 90 bp TCTGACTTCAATACCTGGCTCCCACACAATATCTCTGAACCTACCTaGGGCCAAAGGGAACTCACTGCCCTGAGGAGACACAAACCTGGC +
Preference number: 5 (lower is better)
Translates to: SDFNTWLPHNISEPT*GQRELTALRRHKPG
Trigger: GCCAGGTTTGTGTCTCCTCAGGGCAGTGAGTTCCCTTTGGCCCCAGGTAGGTTCAGAGATATTGTGTGGGAGCCAGGTATTGAAGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS-3UTR CAA 90 bp AGTGCTCTGTCAACAGGTCCTTGTTATAATGCGAAAACACATCTGGCTGGATGGAATGTCAACAGTCCCTaGGGCGGTCCTCTAACAGGA +
Preference number: 5 (lower is better)
Translates to: SALSTGPCYNAKTHLAGWNVNSP*GGPLTG
Trigger: TCCTGTTAGAGGACCGCCCAAGGGACTGTTGACATT...CCATCCAGCCAGATGTGTTTTCGCATTATAACAAGGACCTGTTGACAGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561814.1
CDS CCA 90 bp AGTGAAAGACACCTTCTGTTTGAGCAAAGCAGAGGAAAAAGTAAATaGGATTCTGTCTTGCACCTGAGGTACCAGCTTGGCCACAGTGGG +
Preference number: 5 (lower is better)
Translates to: SERHLLFEQSRGKSK*DSVLHLRYQLGHSG
Trigger: CCCACTGTGGCCAAGCTGGTACCTCAGGTGCAAGACAGAATCCCATTTACTTTTTCCTCTGCTTTGCTCAAACAGAAGGTGTCTTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS GCA 90 bp AATTCTGGAAAGCCTTCCCAACAAGGGTGGACACAAAGCCCAGACTaGGAAGGCTACAATAAATGCCTAACTCTTCAATGCCAAGACACA +
Preference number: 5 (lower is better)
Translates to: NSGKPSQQGWTQSPD*EGYNKCLTLQCQDT
Trigger: TGTGTCTTGGCATTGAAGAGTTAGGCATTTATTGTAGCCTTCGCAGTCTGGGCTTTGTGTCCACCCTTGTTGGGAAGGCTTTCCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 90 bp AGTAGAATAGAACACGAGATAAATAAGGCTTCTGACTTCAATACCTaGCTCCCACACAATATCTCTGAACCTACCTGGGGCCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SRIEHEINKASDFNT*LPHNISEPTWGQRE
Trigger: TTCCCTTTGGCCCCAGGTAGGTTCAGAGATATTGTGTGGGAGCCAGGTATTGAAGTCAGAAGCCTTATTTATCTCGTGTTCTATTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS TCA 90 bp GATAATTCATCGATTTTAACCAAGACCAACCACATGGTACCTCTATaGGTCTGCAAGAACAACGTTATTGAGTTTGAGATCCAAGTACCT +
Preference number: 5 (lower is better)
Translates to: DNSSILTKTNHMVPL*VCKNNVIEFEIQVP
Trigger: AGGTACTTGGATCTCAAACTCAATAACGTTGTTCTTGCAGACTCATAGAGGTACCATGTGGTTGGTCTTGGTTAAAATCGATGAATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp GATAGCCCAGTGGAAACCCCTGTGGGCTGGTGGTGGTaGCAGACACATTGTGAGGCTCCTCTGCCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: DSPVETPVGWWW*QTHCEAPLPAE
Trigger: TTCTGCAGGCAGAGGAGCCTCACAATGTGTCTGCCACCACCACCAGCCCACAGGGGTTTCCACTGGGCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp AGTGATAGCCCAGTGGAAACCCCTGTGGGCTGGTGGTaGTGGCAGACACATTGTGAGGCTCCTCTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SDSPVETPVGWW*WQTHCEAPLPA
Trigger: TGCAGGCAGAGGAGCCTCACAATGTGTCTGCCACCACCACCAGCCCACAGGGGTTTCCACTGGGCTATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS TCA 72 bp CTGAACCTACCTGGGGCCAAAGGGAACTCACTGCCCTaGGGAGACACAAACCTGGCTGGTTACCACCTGCTG +
Preference number: 6 (lower is better)
Translates to: LNLPGAKGNSLP*GDTNLAGYHLL
Trigger: CAGCAGGTGGTAACCAGCCAGGTTTGTGTCTCCTCAGGGCAGTGAGTTCCCTTTGGCCCCAGGTAGGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS GCA 72 bp GCTTGTGCCACCTTGCCCTTGCCCCTCAGCAGCATCTaGATGGCGGGGAGAAATCTGTTCATTTGGGAGACG +
Preference number: 6 (lower is better)
Translates to: ACATLPLPLSSI*MAGRNLFIWET
Trigger: CGTCTCCCAAATGAACAGATTTCTCCCCGCCATGCAGATGCTGCTGAGGGGCAAGGGCAAGGTGGCACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp GTGCCACCTTGCCCTTGCCCCTCAGCAGCATCTGCATaGCGGGGAGAAATCTGTTCATTTGGGAGACGGAGA +
Preference number: 6 (lower is better)
Translates to: VPPCPCPSAASA*RGEICSFGRRR
Trigger: TCTCCGTCTCCCAAATGAACAGATTTCTCCCCGCCATGCAGATGCTGCTGAGGGGCAAGGGCAAGGTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS TCA 72 bp TGGGAGACGGAGAGCACAGTGACTAGGGGACTACAATaGACCCAGTGCTGCCCTATCACAGCAGAGACCTGG +
Preference number: 6 (lower is better)
Translates to: WETESTVTRGLQ*TQCCPITAETW
Trigger: CCAGGTCTCTGCTGTGATAGGGCAGCACTGGGTTCATTGTAGTCCCCTAGTCACTGTGCTCTCCGTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp AACATCAGTGATAGCCCAGTGGAAACCCCTGTGGGCTaGTGGTGGTGGCAGACACATTGTGAGGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: NISDSPVETPVG*WWWQTHCEAPL
Trigger: CAGAGGAGCCTCACAATGTGTCTGCCACCACCACCAGCCCACAGGGGTTTCCACTGGGCTATCACTGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp TTCTGTCTTGCACCTGAGGTACCAGCTTGGCCACAGTaGGGTAGAGCACCAAGCAGACTCTTAGGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: FCLAPEVPAWPQ*GRAPSRLLGSL
Trigger: CAGGGACCCTAAGAGTCTGCTTGGTGCTCTACCCCACTGTGGCCAAGCTGGTACCTCAGGTGCAAGACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS GCA 72 bp ACTAAGACACCAACAGTGAAGGAAAGGGAGTGCTTGTaGCACCTTGCCCTTGCCCCTCAGCAGCATCTGCAT +
Preference number: 6 (lower is better)
Translates to: TKTPTVKERECL*HLALAPQQHLH
Trigger: ATGCAGATGCTGCTGAGGGGCAAGGGCAAGGTGGCACAAGCACTCCCTTTCCTTCACTGTTGGTGTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp AATACCTGGCTCCCACACAATATCTCTGAACCTACCTaGGGCCAAAGGGAACTCACTGCCCTGAGGAGACAC +
Preference number: 6 (lower is better)
Translates to: NTWLPHNISEPT*GQRELTALRRH
Trigger: GTGTCTCCTCAGGGCAGTGAGTTCCCTTTGGCCCCAGGTAGGTTCAGAGATATTGTGTGGGAGCCAGGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp AGCAGCATCTGCATGGCGGGGAGAAATCTGTTCATTTaGGAGACGGAGAGCACAGTGACTAGGGGACTACAA +
Preference number: 6 (lower is better)
Translates to: SSICMAGRNLFI*ETESTVTRGLQ
Trigger: TTGTAGTCCCCTAGTCACTGTGCTCTCCGTCTCCCAAATGAACAGATTTCTCCCCGCCATGCAGATGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp TGTGCTCACTTCAAGTCTAAATTAGCACAGTCCCAGTaGTGGGGGCAACAGGGAAGCTTATGTCATCCCACC +
Preference number: 6 (lower is better)
Translates to: CAHFKSKLAQSQ*WGQQGSLCHPT
Trigger: GGTGGGATGACATAAGCTTCCCTGTTGCCCCCACCACTGGGACTGTGCTAATTTAGACTTGAAGTGAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp ACCTACAGTGGTACCCCAATAACACATCATGAACATTaGACTCCGAGATGTGCTGGCTTCAGGTGTGACCCA +
Preference number: 6 (lower is better)
Translates to: TYSGTPITHHEH*TPRCAGFRCDP
Trigger: TGGGTCACACCTGAAGCCAGCACATCTCGGAGTCCAATGTTCATGATGTGTTATTGGGGTACCACTGTAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS TCA 72 bp TATCACAGCAGAGACCTGGCAGGATTCATCACCTTCTaGCTTAGGAGCTGCTGGTCTCTGAATAACCTACAG +
Preference number: 6 (lower is better)
Translates to: YHSRDLAGFITF*LRSCWSLNNLQ
Trigger: CTGTAGGTTATTCAGAGACCAGCAGCTCCTAAGTCAGAAGGTGATGAATCCTGCCAGGTCTCTGCTGTGATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS TCA 72 bp CTGAATAACCTACAGTGGTACCCCAATAACACATCATaGACATTGGACTCCGAGATGTGCTGGCTTCAGGTG +
Preference number: 6 (lower is better)
Translates to: LNNLQWYPNNTS*TLDSEMCWLQV
Trigger: CACCTGAAGCCAGCACATCTCGGAGTCCAATGTTCATGATGTGTTATTGGGGTACCACTGTAGGTTATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CAA 90 bp AGAACATTTCCCACTGTGGTGGGTATAGTGAAAGACACCTTCTGTTaGAGCAAAGCAGAGGAAAAAGTAAATGGGATTCTGTCTTGCACC +
Preference number: 6 (lower is better)
Translates to: RTFPTVVGIVKDTFC*SKAEEKVNGILSCT
Trigger: GGTGCAAGACAGAATCCCATTTACTTTTTCCTCTGCTTTGCTCAAACAGAAGGTGTCTTTCACTATACCCACCACAGTGGGAAATGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS TCA 72 bp AGACCATCCAGTAAAATATGGCCTCACCTAACAAACTaGATAAGGCATAAGAGGCCAATCCTGGAGAAACAA +
Preference number: 6 (lower is better)
Translates to: RPSSKIWPHLTN*IRHKRPILEKQ
Trigger: TTGTTTCTCCAGGATTGGCCTCTTATGCCTTATTCAGTTTGTTAGGTGAGGCCATATTTTACTGGATGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS GCA 72 bp GACTGCGAAGGCTACAATAAATGCCTAACTCTTCAATaGCAAGACACAGATGAACATCTACACATTAAGACC +
Preference number: 6 (lower is better)
Translates to: DCEGYNKCLTLQ*QDTDEHLHIKT
Trigger: GGTCTTAATGTGTAGATGTTCATCTGTGTCTTGGCATTGAAGAGTTAGGCATTTATTGTAGCCTTCGCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CCA 72 bp AAAAAGAAACAGCATACAATGAAACTCCAGTACGTCTaGCAGCAGATTTTCAGTGGAAATCTTACAGGCCAG +
Preference number: 6 (lower is better)
Translates to: KKKQHTMKLQYV*QQIFSGNLTGQ
Trigger: CTGGCCTGTAAGATTTCCACTGAAAATCTGCTGCCAGACGTACTGGAGTTTCATTGTATGCTGTTTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS TCA 72 bp TCGATTTTAACCAAGACCAACCACATGGTACCTCTATaGGTCTGCAAGAACAACGTTATTGAGTTTGAGATC +
Preference number: 6 (lower is better)
Translates to: SILTKTNHMVPL*VCKNNVIEFEI
Trigger: GATCTCAAACTCAATAACGTTGTTCTTGCAGACTCATAGAGGTACCATGTGGTTGGTCTTGGTTAAAATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CAA 72 bp ATCCAAGTACAACCAGGTTACAGAACACAAAGCAGATaGAACCCAAAGACGACTACCTCAAGACATTTAATA +
Preference number: 6 (lower is better)
Translates to: IQVQPGYRTQSR*NPKTTTSRHLI
Trigger: TATTAAATGTCTTGAGGTAGTCGTCTTTGGGTTCAATCTGCTTTGTGTTCTGTAACCTGGTTGTACTTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CAA 72 bp TACCTCTATGAGTCTGCAAGAACAACGTTATTGAGTTaGAGATCCAAGTACCTTCAAATTCTGGAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: YLYESARTTLLS*RSKYLQILESL
Trigger: AAGGCTTTCCAGAATTTGAAGGTACTTGGATCTCAAACTCAATAACGTTGTTCTTGCAGACTCATAGAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2
CDS CAA 72 bp ACATGGTACCTCTATGAGTCTGCAAGAACAACGTTATaGAGTTTGAGATCCAAGTACCTTCAAATTCTGGAA +
Preference number: 6 (lower is better)
Translates to: TWYLYESARTTL*SLRSKYLQILE
Trigger: TTCCAGAATTTGAAGGTACTTGGATCTCAAACTCAATAACGTTGTTCTTGCAGACTCATAGAGGTACCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575471.2