RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF26 (Homo sapiens)

Ensembl gene IDs: ENSG00000198393

Ensembl transcript IDs: ENST00000328654.10, ENST00000534834.1, ENST00000537956.1, ENST00000540238.5, ENST00000544181.5, ENST00000545101.1, ENST00000627376.1

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTCCTGTTTGTCAGGGATTCAGGAGAGGTCTGACTGAGCCGTTCTaGGTCAGAATTTCTCATGGAGCCAGAAAGGCATGGAACGGGAGC +
Preference number: 1 (lower is better)
Translates to: VPVCQGFRRGLTEPF*VRISHGARKAWNGS
Trigger: GCTCCCGTTCCATGCCTTTCTGGCTCCATGAGAAATTCTGACCCAGAACGGCTCAGTCAGACCTCTCCTGAATCCCTGACAAACAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 90 bp ACAGATATGAGGTCTTGCCCTGTCATCCAGGCTGAAACACAATCATaGCTCACTGCATCCTCAACCTTCTGGGCTGAAGCGACACTCCTG +
Preference number: 1 (lower is better)
Translates to: TDMRSCPVIQAETQS*LTASSTFWAEATLL
Trigger: CAGGAGTGTCGCTTCAGCCCAGAAGGTTGAGGATGCAGTGAGCCATGATTGTGTTTCAGCCTGGATGACAGGGCAAGACCTCATATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 90 bp GTCTCAGGTCAAGAGTTCCTTTTGGCCTCCAGCCTGATCTCAGACTaGACTTTCCTCTTTGGGAACTCCTATGCCCTCTACTCAGAAGAC +
Preference number: 1 (lower is better)
Translates to: VSGQEFLLASSLISD*TFLFGNSYALYSED
Trigger: GTCTTCTGAGTAGAGGGCATAGGAGTTCCCAAAGAGGAAAGTCCAGTCTGAGATCAGGCTGGAGGCCAAAAGGAACTCTTGACCTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 90 bp TCCTACTGGGTACCCATTACCAGTTCGGTGATTAGGGTTTGGTTCTaGTTTCTTGGACTTCTCCTCCATGGCTCTTTGCTCTACCCTCTG +
Preference number: 1 (lower is better)
Translates to: SYWVPITSSVIRVWF*FLGLLLHGSLLYPL
Trigger: CAGAGGGTAGAGCAAAGAGCCATGGAGGAGAAGTCCAAGAAAGCAGAACCAAACCCTAATCACCGAACTGGTAATGGGTACCCAGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 90 bp AGGAATCACTACCAGATAAAAGTCTGTGATTCCAGGACTGCATCTTaGAGGACGGTGCCCTGTGCTTGTCAAGTACTGCCACTAAGCTGG +
Preference number: 1 (lower is better)
Translates to: RNHYQIKVCDSRTAS*RTVPCACQVLPLSW
Trigger: CCAGCTTAGTGGCAGTACTTGACAAGCACAGGGCACCGTCCTCCAAGATGCAGTCCTGGAATCACAGACTTTTATCTGGTAGTGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp CTGTGTACACTCCCTATTGAGGAATCACTACCAGATAAAAGTCTGTaGTTCCAGGACTGCATCTTGGAGGACGGTGCCCTGTGCTTGTCA +
Preference number: 1 (lower is better)
Translates to: LCTLPIEESLPDKSL*FQDCILEDGALCLS
Trigger: TGACAAGCACAGGGCACCGTCCTCCAAGATGCAGTCCTGGAATCACAGACTTTTATCTGGTAGTGATTCCTCAATAGGGAGTGTACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp ATTTCTGATGGTTCCTGTTTGTCAGGGATTCAGGAGAGGTCTGACTaGGCCGTTCTGGGTCAGAATTTCTCATGGAGCCAGAAAGGCATG +
Preference number: 1 (lower is better)
Translates to: ISDGSCLSGIQERSD*AVLGQNFSWSQKGM
Trigger: CATGCCTTTCTGGCTCCATGAGAAATTCTGACCCAGAACGGCTCAGTCAGACCTCTCCTGAATCCCTGACAAACAGGAACCATCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 90 bp CTCCAGCCTGATCTCAGACTGGACTTTCCTCTTTGGGAACTCCTATaGCCTCTACTCAGAAGACTGTCCTCTTGGCTTCTTTTGGCTTTT +
Preference number: 1 (lower is better)
Translates to: LQPDLRLDFPLWELL*PLLRRLSSWLLLAF
Trigger: AAAAGCCAAAAGAAGCCAAGAGGACAGTCTTCTGAGTAGAGGGCATAGGAGTTCCCAAAGAGGAAAGTCCAGTCTGAGATCAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 90 bp TCACTGGAAATGATGTTAAGTGGAGCTGATCCCGTTCCCACTCCTTaGCTCTTGGACCTGTGTACACTCCCTATTGAGGAATCACTACCA +
Preference number: 1 (lower is better)
Translates to: SLEMMLSGADPVPTP*LLDLCTLPIEESLP
Trigger: TGGTAGTGATTCCTCAATAGGGAGTGTACACAGGTCCAAGAGCCAAGGAGTGGGAACGGGATCAGCTCCACTTAACATCATTTCCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 90 bp GCCAACAAAACTCAAAGGATGGGGCAAGACTATAAGTGGGAGGAGTaGCAAGATCACACTGTAGAAGAGGAGATGAGATGGAAGCTACTG +
Preference number: 1 (lower is better)
Translates to: ANKTQRMGQDYKWEE*QDHTVEEEMRWKLL
Trigger: CAGTAGCTTCCATCTCATCTCCTCTTCTACAGTGTGATCTTGCCACTCCTCCCACTTATAGTCTTGCCCCATCCTTTGAGTTTTGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 90 bp GACTCACAAGCCAACAAAACTCAAAGGATGGGGCAAGACTATAAGTaGGAGGAGTGGCAAGATCACACTGTAGAAGAGGAGATGAGATGG +
Preference number: 1 (lower is better)
Translates to: DSQANKTQRMGQDYK*EEWQDHTVEEEMRW
Trigger: CCATCTCATCTCCTCTTCTACAGTGTGATCTTGCCACTCCTCCCACTTATAGTCTTGCCCCATCCTTTGAGTTTTGTTGGCTTGTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp AACTTTTTCAGCAATGTCAAAGTTGCCAAGTCTGACACTCCACCCTaGGGTGAGATTTCAGGGCTTCAGGCCTGTCATTCTCATGGTCTA +
Preference number: 1 (lower is better)
Translates to: NFFSNVKVAKSDTPP*GEISGLQACHSHGL
Trigger: TAGACCATGAGAATGACAGGCCTGAAGCCCTGAAATCTCACCTCAGGGTGGAGTGTCAGACTTGGCAACTTTGACATTGCTGAAAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp ATTTCTCATGGAGCCAGAAAGGCATGGAACGGGAGCATATGGGGCTaGACAAGCATCTCTTTATGTAATCTCAGAGCCTCTCTATGTGGT +
Preference number: 1 (lower is better)
Translates to: ISHGARKAWNGSIWG*TSISLCNLRASLCG
Trigger: ACCACATAGAGAGGCTCTGAGATTACATAAAGAGATGCTTGTTCAGCCCCATATGCTCCCGTTCCATGCCTTTCTGGCTCCATGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 90 bp GTACTGCAGCTTCAAGGACTGCTTACATGGCAAATGAAGGATCTCTaGAATCAAGGCAGAAGCCGCATGGCTTTTTATATCCTGCGAAGT +
Preference number: 1 (lower is better)
Translates to: VLQLQGLLTWQMKDL*NQGRSRMAFYILRS
Trigger: ACTTCGCAGGATATAAAAAGCCATGCGGCTTCTGCCTTGATTGCAGAGATCCTTCATTTGCCATGTAAGCAGTCCTTGAAGCTGCAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 90 bp CATCACTGCTGGGTGTCAGTGCACCAAGTATATGCTGTAAGTAATTaGCCTTCACTGAACACCCTCAAAGGATTTCACAAGTATCTACCC +
Preference number: 1 (lower is better)
Translates to: HHCWVSVHQVYAVSN*PSLNTLKGFHKYLP
Trigger: GGGTAGATACTTGTGAAATCCTTTGAGGGTGTTCAGTGAAGGGCAATTACTTACAGCATATACTTGGTGCACTGACACCCAGCAGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 90 bp CAGATCCTTCCCTCAGAGCCCTCAGAAGGAACCAAAACCTGTCAATaGCTTGATTTCAAACATGGAGGCTCCAGAACAGTAAGACAATAT +
Preference number: 1 (lower is better)
Translates to: QILPSEPSEGTKTCQ*LDFKHGGSRTVRQY
Trigger: ATATTGTCTTACTGTTCTGGAGCCTCCATGTTTGAAATCAAGGCATTGACAGGTTTTGGTTCCTTCTGAGGGCTCTGAGGGAAGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp CAACTCAAAGAGATATGTTGGGGTCCTAATTTCCATACCTCAGAGTaGGGCCTTATTTGGAGAGAGGGTCTGTACAGAGTTAACAATGTT +
Preference number: 1 (lower is better)
Translates to: QLKEICWGPNFHTSE*GLIWREGLYRVNNV
Trigger: AACATTGTTAACTCTGTACAGACCCTCTCTCCAAATAAGGCCTCACTCTGAGGTATGGAAATTAGGACCCCAACATATCTCTTTGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp GGGACTCTTGAGGATGCAGTTCCTGAGGTGCTATTTCTCCCAATCTaGATGCCTGTGAAATATGAGACAAGTTATTTTCATCTTACACAC +
Preference number: 1 (lower is better)
Translates to: GTLEDAVPEVLFLPI*MPVKYETSYFHLTH
Trigger: GTGTGTAAGATGAAAATAACTTGTCTCATATTTCACAGGCATTCAGATTGGGAGAAATAGCACCTCAGGAACTGCATCCTCAAGAGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp ATCTTAGTTCTGCTCTCTGAGTCATCCATGGTTTTTCATAAAATGTaGCCATGTTTGCAAGTGAGTATCCTTCTCAACCTCCTTCCTGAG +
Preference number: 1 (lower is better)
Translates to: ILVLLSESSMVFHKM*PCLQVSILLNLLPE
Trigger: CTCAGGAAGGAGGTTGAGAAGGATACTCACTTGCAAACATGGTCACATTTTATGAAAAACCATGGATGACTCAGAGAGCAGAACTAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp AGGATGCAGTTCCTGAGGTGCTATTTCTCCCAATCTGAATGCCTGTaGAATATGAGACAAGTTATTTTCATCTTACACACCCAGAACGTA +
Preference number: 1 (lower is better)
Translates to: RMQFLRCYFSQSECL*NMRQVIFILHTQNV
Trigger: TACGTTCTGGGTGTGTAAGATGAAAATAACTTGTCTCATATTTCACAGGCATTCAGATTGGGAGAAATAGCACCTCAGGAACTGCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 90 bp ATGTTTAGTGTAGATTATTGTTACCAAACTGGTAAAAATAAGCCATaGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCAC +
Preference number: 1 (lower is better)
Translates to: MFSVDYCYQTGKNKP*GTGRISFLLQGKFH
Trigger: GTGGAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTTACCAGTTTGGTAACAATAATCTACACTAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp CAGAATGAATGGATGTTCTCAACAGAATTCTGGGACAAGAATGAATaGGTTCCCACATTTTCTGGTTCATGTACAAATGAATTACAGACT +
Preference number: 1 (lower is better)
Translates to: QNEWMFSTEFWDKNE*VPTFSGSCTNELQT
Trigger: AGTCTGTAATTCATTTGTACATGAACCAGAAAATGTGGGAACTCATTCATTCTTGTCCCAGAATTCTGTTGAGAACATCCATTCATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 90 bp TACTCATTCCTGCAATGCTCTATGAATTCTACATATTTTCCTAAATaGGCAATCCCATCCCAGGGCATGTTTAGTGTAGATTATTGTTAC +
Preference number: 1 (lower is better)
Translates to: YSFLQCSMNSTYFPK*AIPSQGMFSVDYCY
Trigger: GTAACAATAATCTACACTAAACATGCCCTGGGATGGGATTGCTCATTTAGGAAAATATGTAGAATTCATAGAGCATTGCAGGAATGAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGGGATTACAGGTGCCTaGCACCACGCCTGGGTAATT +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLGITGA*HHAWVI
Trigger: AATTACCCAGGCGTGGTGGCAGGCACCTGTAATCCC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACCCTGTCATCCAGGCTaGAACACAATCATGGCTCAC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLPCHPG*NTIMAH
Trigger: GTGAGCCATGATTGTGTTTCAGCCTGGATGACAGGG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGCACTTCAACCTTGGTaGCAGAGTGAGATTCCGTCT +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLALQPW*QSEIPS
Trigger: AGACGGAATCTCACTCTGTCACCAAGGTTGAAGTGC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGTGAGCTGAGATCATaGCATTGCATTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSELRS*HCIPAW
Trigger: CCAGGCTGGAATGCAATGGCATGATCTCAGCTCACT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGCCTCCCAAGTAGCTaGGACCATAGGAAAGCATCT +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSLPSS*DHRKAS
Trigger: AGATGCTTTCCTATGGTCCCAGCTACTTGGGAGGCT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGGGGTTTCACCATGTTaGCCAGGTTGTTCTCAAACG +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLGVSPC*PGCSQT
Trigger: CGTTTGAGAACAACCTGGCCAACATGGTGAAACCCC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGAAGTTGCAGTGAGCTaGGATCATGCCATTGCATTC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLEVAVS*DHAIAF
Trigger: GAATGCAATGGCATGATCTCAGCTCACTGCAACTTC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCTGGGATTGCAGGTGTaGACCGCTGTAACCAGCTTT +
Preference number: 2 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELGLQV*TAVTSF
Trigger: AAAGCTGGTTACAGCGGTGCACACCTGCAATCCCAG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTGATCCCGGCTCACTaGAACCTCTGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVIPAH*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTGAGCCGGGATCAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACAAATGAAGGATCTCTaGAATCAAGGCAGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLQMKDL*NQGRSR
Trigger: GCGGCTTCTGCCTTGATTGCAGAGATCCTTCATTTG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAACCATCATCACTGCTaGGTGTCAGTGCACCAAGTA +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLNHHHC*VSVHQV
Trigger: TACTTGGTGCACTGACACCCAGCAGTGATGATGGTT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATTGGTTCTGCTTTCTTaGACTTCTCCTCCATGGCTC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLVLLS*TSPPWL
Trigger: GAGCCATGGAGGAGAAGTCCAAGAAAGCAGAACCAA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 90 bp CCAGGATCTCATCGTCAAACTCTGCTACAGGTGCAGATGGGACTCTaGAGGATGCAGTTCCTGAGGTGCTATTTCTCCCAATCTGAATGC +
Preference number: 2 (lower is better)
Translates to: PGSHRQTLLQVQMGL*RMQFLRCYFSQSEC
Trigger: GCATTCAGATTGGGAGAAATAGCACCTCAGGAACTGCATCCTCAAGAGTCCCATCTGCACCTGTAGCAGAGTTTGACGATGAGATCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGCCAAATATACTATTTaGTTCCCACCACCTCACTCC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLAKYTI*FPPPHS
Trigger: GGAGTGAGGTGGTGGGAATCAAATAGTATATTTGGC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAACATATTTTCCTAAATaGGCAATCCCATCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLTYFPK*AIPSQG
Trigger: GCCCTGGGATGGGATTGCTCATTTAGGAAAATATGT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACACTCATCCCAAATATaGTTGGTCTCTCTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLHSSQI*LVSLLS
Trigger: AGAGAGGAGAGAGACCAACCATATTTGGGATGAGTG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGCCATAAGCCAGTGTTaGATCTGGTCTTGCCTTAGC +
Preference number: 2 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEAISQC*IWSCLS
Trigger: GCTAAGGCAAGACCAGATCCAACACTGGCTTATGGC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGCAGTGGTACAAATATaGCTTACTGCAGCTTCAACC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLAVVQI*LTAAST
Trigger: GGTTGAAGCTGCAGTAAGCCATATTTGTACCACTGC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCAGGCTGAAGTGCGGTaGCGTGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMQAEVR*RDLGSL
Trigger: CAGTGAGCCGAGATCACGCCACCGCACTTCAGCCTG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACTTTGCTCTACCCTCTaGATCTTAGTTCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLCSTL*ILVLLS
Trigger: AGAGAGCAGAACTAAGATCCAGAGGGTAGAGCAAAG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAATAGCAGGCACACTGTaGAAGAGAATGTGTGATAGG +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLIAGTL*KRMCDR
Trigger: CCTATCACACATTCTCTTCCACAGTGTGCCTGCTAT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 90 bp ATCCCGTTCCCACTCCTTGGCTCTTGGACCTGTGTACACTCCCTATaGAGGAATCACTACCAGATAAAAGTCTGTGATTCCAGGACTGCA +
Preference number: 2 (lower is better)
Translates to: IPFPLLGSWTCVHSL*RNHYQIKVCDSRTA
Trigger: TGCAGTCCTGGAATCACAGACTTTTATCTGGTAGTGATTCCTCAATAGGGAGTGTACACAGGTCCAAGAGCCAAGGAGTGGGAACGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCCAGAGGCGGAAGTTaGAGTGAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPRGGS*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACTTCCGCCTCTGGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACATCCCAAATATGGTTaGTCTCTCTCCTCTCTGATT +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLHPKYG*SLSSLI
Trigger: AATCAGAGAGGAGAGAGACCAACCATATTTGGGATG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAATAACACACTTTTATTaGGTCTTGGTGGAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLITHFY*VLVEGE
Trigger: CTCTCCCTCCACCAAGACCCAATAAAAGTGTGTTAT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATCCTCCACATTCTTTTaGCTACAAGTGACTCACAAG +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSSTFF*LQVTHK
Trigger: CTTGTGAGTCACTTGTAGCCAAAAGAATGTGGAGGA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCTGCCTCAACCTCCTaGGTAGCTGGGATTGCAGGT +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPASTS*VAGIAG
Trigger: ACCTGCAATCCCAGCTACTCAGGAGGTTGAGGCAGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGTAATCCTAGCCACTTaGGAGGCTGAGGCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLVILAT*EAEARK
Trigger: TTTCCTTGCCTCAGCCTCCCAAGTGGCTAGGATTAC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTTAAAACCATCATCATaGTCAGGCATGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELKPSS*SGMVAH
Trigger: GTGAGCCACCATGCCTGACCATGATGATGGTTTTAA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAAGCCTCCAGAGTAGCTaGGACCACAGCCCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESLQSS*DHSPKP
Trigger: TGGCTTAGGGCTGTGGTCCCAGCTACTCTGGAGGCT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 90 bp CCAGTAGAAGTAATATTTCCAACTGTCTCAGGTCAAGAGTTCCTTTaGGCCTCCAGCCTGATCTCAGACTGGACTTTCCTCTTTGGGAAC +
Preference number: 2 (lower is better)
Translates to: PVEVIFPTVSGQEFL*ASSLISDWTFLFGN
Trigger: GTTCCCAAAGAGGAAAGTCCAGTCTGAGATCAGGCTGGAGGCCAAAAGGAACTCTTGACCTGAGACAGTTGGAAATATTACTTCTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 90 bp CTCCTCCCCCAAGATCCCAATGTCTCATCCCGTTATAATATCAGATaGAAGACCAGGATCTCATCGTCAAACTCTGCTACAGGTGCAGAT +
Preference number: 2 (lower is better)
Translates to: LLPQDPNVSSRYNIR*KTRISSSNSATGAD
Trigger: ATCTGCACCTGTAGCAGAGTTTGACGATGAGATCCTGGTCTTCAATCTGATATTATAACGGGATGAGACATTGGGATCTTGGGGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCATATTGGCCAGGCTaGACTCGAACTCCCGACCTT +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPYWPG*TRTPDL
Trigger: AAGGTCGGGAGTTCGAGTTCAGCCTGGCCAATATGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGATGTTAAGTGGAGCTaGTCCCGTTCCCACTCCTTG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMDVKWS*SRSHSL
Trigger: CAAGGAGTGGGAACGGGATCAGCTCCACTTAACATC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGTCTCTTTGATGTACTaGTTTCCTTTCTTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLVSLMY*FPFFWL
Trigger: AAGCCAAAAGAAAGGAAATCAGTACATCAAAGAGAC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGTGCAGGTGTCTCTTTaGTGTACTGATTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEVQVSL*CTDFLS
Trigger: AGAAAGGAAATCAGTACATCAAAGAGACACCTGCAC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGATTCAGGAGAGGTCTaGCTGAGCCGTTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEDSGEV*LSRSGS
Trigger: TGACCCAGAACGGCTCAGTCAGACCTCTCCTGAATC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCTGAGGCAAGGAAATTaGTTGAACCCAGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFLRQGN*LNPGGG
Trigger: TCCACCTCCTGGGTTCAAGCAATTTCCTTGCCTCAG...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTTTTGTTCTTCCCCTTaGCATAAGCCAGTGTTGGAT +
Preference number: 2 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEFCSSP*HKPVLD
Trigger: ATCCAACACTGGCTTATGGCAAGGGGAAGAACAAAA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCTTGTGGCTTTAAGTTaGCATCTAGAGCCATTTCCT +
Preference number: 2 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELVALS*HLEPFP
Trigger: AGGAAATGGCTCTAGATGGCAACTTAAAGCCACAAG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCCACTCCTTGGCTCTTaGACCTGTGTACACTCCCTA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMPLLGS*TCVHSL
Trigger: TAGGGAGTGTACACAGGTCCAAGAGCCAAGGAGTGG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 90 bp TGGGCCTTTTGTGGGACCTCACCCTTAAAATTCTTAGCAGTTCTGTaGCTTATGAGAGAGGGCTCACAGAAGCATTCTCTCAAGTCCTTA +
Preference number: 2 (lower is better)
Translates to: WAFCGTSPLKFLAVL*LMREGSQKHSLKSL
Trigger: TAAGGACTTGAGAGAATGCTTCTGTGAGCCCTCTCTCATAAGCAACAGAACTGCTAAGAATTTTAAGGGTGAGGTCCCACAAAAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCAGTGGAACGGATACCTaGAAGACACTACCACAGGAA +
Preference number: 2 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFSGTDT*KTLPQE
Trigger: TTCCTGTGGTAGTGTCTTTCAGGTATCCGTTCCACT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGATTCTGGGACAAGAATaGATGAGTTCCCACATTTTC +
Preference number: 2 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEILGQE*MSSHIF
Trigger: GAAAATGTGGGAACTCATTCATTCTTGTCCCAGAAT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCTTTCGAGTTCAAGTaGTACTCCCGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPFEFK*YSRLSL
Trigger: GAGGCTGAGACGGGAGTATCACTTGAACTCGAAAGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAAGTGAGCCGAGATTGTaGAATTCACTCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESEPRL*NSLQPG
Trigger: CCCAGGCTGGAGTGAATTGCACAATCTCGGCTCACT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACCAATGCTAACATTTTaGAACACTACAGTATATCAC +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLPMLTF*NTTVYH
Trigger: GTGATATACTGTAGTGTTGCAAAATGTTAGCATTGG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTCAAGCAATTTTCCTaGCTTGGCCTCCTGAAGCTC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLKQFS*LGLLKL
Trigger: GAGCTTCAGGAGGCCAAGGCAGGAAAATTGCTTGAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACACTGTTGCCCAGACTaGAGTACAGTGCAGCTCACT +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEHCCPD*STVQLT
Trigger: AGTGAGCTGCACTGTACTCCAGTCTGGGCAACAGTG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGAGCCAGTGTTGGATCTaGTCTTGCCTTAGCTGCTAC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMSQCWI*SCLSCY
Trigger: GTAGCAGCTAAGGCAAGACCAGATCCAACACTGGCT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATTGCTAAAATTTTATTaGACATCCATCTGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLLKFY*TSIWAL
Trigger: CAAAGCCCAGATGGATGTCCAATAAAATTTTAGCAA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGACCATGTTTGCAAGTaGGTATCCTTCTCAACCTCC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMDHVCK*VSFSTS
Trigger: GGAGGTTGAGAAGGATACTCACTTGCAAACATGGTC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAACAATCATGGCTCACTaGATCCTCAACCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLETIMAH*ILNLLG
Trigger: GCCCAGAAGGTTGAGGATGCAGTGAGCCATGATTGT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGAAATTAAGGATGCTCTaGCCGGGTACGATGGCTCAT +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMKLRML*PGTMAH
Trigger: ATGAGCCATCGTACCCGGCCAGAGCATCCTTAATTT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGAATATAAAAACTAGCTaGGCGTGGTGGTGGGCACCT +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMNIKTS*AWWWAP
Trigger: AGGTGCCCACCACCACGCCCAGCTAGTTTTTATATT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTGGGACAAGAATGAATaGGTTCCCACATTTTCTGGT +
Preference number: 2 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFWDKNE*VPTFSG
Trigger: ACCAGAAAATGTGGGAACTCATTCATTCTTGTCCCA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTACCAAGGCAACAACTaGTCAGTTAAAGCCCTTAGG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMYQGNN*SVKALR
Trigger: CCTAAGGGCTTTAACTGATCAGTTGTTGCCTTGGTA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTAATTGCCCTTCACTaGACACCCTCAAAGGATTTC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVIALH*TPSKDF
Trigger: GAAATCCTTTGAGGGTGTTCAGTGAAGGGCAATTAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGGCTGCAGTGAGCTATaGTCATGCAACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFGCSEL*SCNCTP
Trigger: TGGAGTGCAGTTGCATGATCATAGCTCACTGCAGCC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGGGAGCATATGGGGCTaGACAAGCATCTCTTTATGT +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEGSIWG*TSISLC
Trigger: ACATAAAGAGATGCTTGTTCAGCCCCATATGCTCCC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTTTTTGTTTATTCATTaGAGGGGGTCAGGAGGCACC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMFLFIH*RGSGGT
Trigger: GGTGCCTCCTGACCCCCTTCAATGAATAAACAAAAA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCAACAATGGGTAAAATaGTCACCTGTAGCTAGTGGA +
Preference number: 2 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFQQWVK*SPVASG
Trigger: TCCACTAGCTACAGGTGAGCATTTTACCCATTGTTG...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACTTTGGGAACTCCTATaGCCTCTACTCAGAAGACTG +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLELWELL*PLLRRL
Trigger: CAGTCTTCTGAGTAGAGGGCATAGGAGTTCCCAAAG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACACCTGGCCTATTTCTaGTGCATTCTGTTGGCTACA +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEHLAYF*CILLAT
Trigger: TGTAGCCAACAGAATGCAGCAGAAATAGGCCAGGTG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGAATGTGACTTTCCATaGAACACACTTTCAATGGGA +
Preference number: 2 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLECDFP*NTLSMG
Trigger: TCCCATTGAAAGTGTGTTCCATGGAAAGTCACATTC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGCTCATGTCAATCAATaGACAACAGGCATGGAACTG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMAHVNQ*TTGMEL
Trigger: CAGTTCCATGCCTGTTGTCCATTGATTGACATGAGC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTACTCAACTGTGCCATaGCTGTGCAAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMYSTVP*LCKSSQ
Trigger: TTGACTGCTTTTGCACAGCCATGGCACAGTTGAGTA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGGTCAGAATTTCTCATaGAGCCAGAAAGGCATGGAA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMGQNFS*SQKGME
Trigger: TTCCATGCCTTTCTGGCTCCATGAGAAATTCTGACC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGACTCCTATTCAAAAATaGGGACAAGAGGAGGCACAG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMTPIQK*GQEEAQ
Trigger: CTGTGCCTCCTCTTGTCCCCATTTTTGAATAGGAGT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCTCCTCTCTGATTTTTaGCATGAGTGTAATTTTAGG +
Preference number: 2 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLLSDF*HECNFR
Trigger: CCTAAAATTACACTCATGTCAAAAATCAGAGAGGAG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTAGGTGGAAGTTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFRWKLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAACTTCCACCT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATCTCAACCTCCTTCCTaGGCAAAAAGGTTGAGAGTT +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESQPPS*AKRLRV
Trigger: AACTCTCAACCTTTTTGCTCAGGAAGGAGGTTGAGA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTATGCTGTAAGTAATTaGCCTTCACTGAACACCCTC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMYAVSN*PSLNTL
Trigger: GAGGGTGTTCAGTGAAGGGCAATTACTTACAGCATA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTACTTTTATTGGGTCTTaGTGGAGGGAGAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFTFIGS*WRERAE
Trigger: CTCAGCCCTCTCCCTCCACCAAGACCCAATAAAAGT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTCGAGAGACCAGAATaGGAGGATTGCTTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFFERPE*EDCLSP
Trigger: AGGGCTCAAGCAATCCTCCCATTCTGGTCTCTCGAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTGAGTCACCACACCTaGCCTCTTTTTAATGATTTG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVSHHT*PLFNDL
Trigger: CAAATCATTAAAAAGAGGCCAGGTGTGGTGACTCAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTATAAGTGGGAGGAGTaGCAAGATCACACTGTAGAA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMYKWEE*QDHTVE
Trigger: TTCTACAGTGTGATCTTGCCACTCCTCCCACTTATA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTCTGCTGCATTCTGTTaGCTACAGGCAAATTACAAG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMSAAFC*LQANYK
Trigger: CTTGTAATTTGCCTGTAGCCAACAGAATGCAGCAGA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTTCAAATCTGGAATGTaGCTTTCCATGGAACACACT +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMFKSGM*LSMEHT
Trigger: AGTGTGTTCCATGGAAAGTCACATTCCAGATTTGAA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTTTATACTCCACCATaGAGTCAACTGTTCATACCA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLYTPP*SQLFIP
Trigger: TGGTATGAACAGTTGACTTCATGGTGGAGTATAAAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTATTTCTCCCAATCTaGATGCCTGTGAAATATGAG +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLFLPI*MPVKYE
Trigger: CTCATATTTCACAGGCATTCAGATTGGGAGAAATAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGACTGTGCCATGGCTGTaGAAAAGCAGTCAAATAATA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMTVPWL*KSSQII
Trigger: TATTATTTGACTGCTTTTGCACAGCCATGGCACAGT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGGGAGGTGGGAGAATTaGTTGAAGCCAAGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFGRWEN*LKPRVQ
Trigger: TTGAACTCTTGGCTTCAAGCAATTCTCCCACCTCCC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTAGCCTGATCTCAGACTaGACTTTCCTCTTTGGGAAC +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFSLISD*TFLFGN
Trigger: GTTCCCAAAGAGGAAAGTCCAGTCTGAGATCAGGCT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCAGGCTGGAGTGCAGTaGTACAAATATGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFQAGVQ*YKYGLL
Trigger: CAGTAAGCCATATTTGTACCACTGCACTCCAGCCTG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGAAATGTATAAGCATTaGCAGGGCACAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFEMYKH*QGTVAH
Trigger: GTGAGCCACTGTGCCCTGCCAATGCTTATACATTTC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATCGGTGATTAGGGTTTaGTTCTGCTTTCTTGGACTT +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESVIRV*FCFLGL
Trigger: AAGTCCAAGAAAGCAGAACCAAACCCTAATCACCGA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCCAGATAAAAGTCTGTaGTTCCAGGACTGCATCTTG +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFPDKSL*FQDCIL
Trigger: CAAGATGCAGTCCTGGAATCACAGACTTTTATCTGG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTACTGTCTCTATCCTaGTTTGGTGTAAAGGTTATA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLLSLS*FGVKVI
Trigger: TATAACCTTTACACCAAATCAGGATAGAGACAGTAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCAGAGAAAACAGGGGTaGTCATGTCAATCAATGGAC +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFQRKQG*SCQSMD
Trigger: GTCCATTGATTGACATGAGCACCCCTGTTTTCTCTG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTACCTGTTAGACATTTaGATGTCTTCTCTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMYLLDI*MSSLRN
Trigger: GTTTCTCAGAGAAGACATGCAAATGTCTAACAGGTA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAAGTTCTATTTTCAGTTaGTTTGAGGAGCCTCCATAC +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESSIFS*FEEPPY
Trigger: GTATGGAGGCTCCTCAAAGCAACTGAAAATAGAACT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAACACAGCTTCAAATCTaGAATGTGACTTTCCATGGA +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLETQLQI*NVTFHG
Trigger: TCCATGGAAAGTCACATTCCAGATTTGAAGCTGTGT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACTCAAAGAGATATGTTaGGGTCCTAATTTCCATACC +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLELKEIC*GPNFHT
Trigger: GGTATGGAAATTAGGACCCCAACATATCTCTTTGAG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGATGGCGAAAGAGACCTaGATTTCATTTACTCAGAAA +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMMAKET*ISFTQK
Trigger: TTTCTGAGTAAATGAAATCCAGGTCTCTTTCGCCAT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTCTATAGCCTTAAATaGAGCATCTGCAGTGCAAAG +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLYSLK*SICSAK
Trigger: CTTTGCACTGCAGATGCTTCATTTAAGGCTATAGAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAACCATTATCCAACAATaGGTAAAATGCTCACCTGTA +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLETIIQQ*VKCSPV
Trigger: TACAGGTGAGCATTTTACCCATTGTTGGATAATGGT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACAGAGCCTCTCTATGTaGTTTCTCTATATGGATTAT +
Preference number: 2 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEQSLSM*FLYMDY
Trigger: ATAATCCATATAGAGAAACCACATAGAGAGGCTCTG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTCTCTGAGTCATCCATaGTTTTTCATAAAATGTGAC +
Preference number: 2 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMSLSHP*FFIKCD
Trigger: GTCACATTTTATGAAAAACCATGGATGACTCAGAGA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTATCCGAAGTCTCCTaGACATCAGTTTCTCACATT +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLSEVS*TSVSHI
Trigger: AATGTGAGAAACTGATGTTCAGGAGACTTCGGATAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTATGAAGCATCTGCAGTaGAAAGTCTATCAGAAGAGT +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFMKHLQ*KVYQKS
Trigger: ACTCTTCTGATAGACTTTGCACTGCAGATGCTTCAT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTACTGAGGGAAGCTTTTaGTACTCCAATTCAATTTTG +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFTEGSF*YSNSIL
Trigger: CAAAATTGAATTGGAGTATCAAAAGCTTCCCTCAGT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTTGCTATATTTCACTaGGGGAAGCTTTTGATACTC +
Preference number: 2 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFFAIFH*GKLLIL
Trigger: GAGTATCAAAAGCTTCCCTCAGTGAAATATAGCAAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp AGGTCTTGCCCTGTCATCCAGGCTGAAACACAATCATaGCTCACTGCATCCTCAACCTTCTGGGCTGAAGCG +
Preference number: 3 (lower is better)
Translates to: RSCPVIQAETQS*LTASSTFWAEA
Trigger: CGCTTCAGCCCAGAAGGTTGAGGATGCAGTGAGCCATGATTGTGTTTCAGCCTGGATGACAGGGCAAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp GGTTCCTGTTTGTCAGGGATTCAGGAGAGGTCTGACTaGGCCGTTCTGGGTCAGAATTTCTCATGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: GSCLSGIQERSD*AVLGQNFSWSQ
Trigger: CTGGCTCCATGAGAAATTCTGACCCAGAACGGCTCAGTCAGACCTCTCCTGAATCCCTGACAAACAGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp TGTCAGGGATTCAGGAGAGGTCTGACTGAGCCGTTCTaGGTCAGAATTTCTCATGGAGCCAGAAAGGCATGG +
Preference number: 3 (lower is better)
Translates to: CQGFRRGLTEPF*VRISHGARKAW
Trigger: CCATGCCTTTCTGGCTCCATGAGAAATTCTGACCCAGAACGGCTCAGTCAGACCTCTCCTGAATCCCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGGCAAGGAAATTGCTaGAACCCAGGAGGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLRQGNC*NPGGGS
Trigger: ACTTCCACCTCCTGGGTTCAAGCAATTTCCTTGCCT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATCTGATGGTTCCTGTTaGTCAGGGATTCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSDGSC*SGIQER
Trigger: CCTCTCCTGAATCCCTGACAAACAGGAACCATCAGA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp GTAAAATGCTCACCTGTAGCTAGTGGAACGGATACCTaGAAGACACTACCACAGGAAGCACCCCAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: VKCSPVASGTDT*KTLPQEAPQRG
Trigger: CCCTCTCTGGGGTGCTTCCTGTGGTAGTGTCTTTCAGGTATCCGTTCCACTAGCTACAGGTGAGCATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp AGCAATGTCAAAGTTGCCAAGTCTGACACTCCACCCTaGGGTGAGATTTCAGGGCTTCAGGCCTGTCATTCT +
Preference number: 3 (lower is better)
Translates to: SNVKVAKSDTPP*GEISGLQACHS
Trigger: AGAATGACAGGCCTGAAGCCCTGAAATCTCACCTCAGGGTGGAGTGTCAGACTTGGCAACTTTGACATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 72 bp GGTTCTGCTTTCTTGGACTTCTCCTCCATGGCTCTTTaGTCTACCCTCTGGATCTTAGTTCTGCTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: GSAFLDFSSMAL*STLWILVLLSE
Trigger: CTCAGAGAGCAGAACTAAGATCCAGAGGGTAGAGCAAAGAGCCATGGAGGAGAAGTCCAAGAAAGCAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp TACCAGATAAAAGTCTGTGATTCCAGGACTGCATCTTaGAGGACGGTGCCCTGTGCTTGTCAAGTACTGCCA +
Preference number: 3 (lower is better)
Translates to: YQIKVCDSRTAS*RTVPCACQVLP
Trigger: TGGCAGTACTTGACAAGCACAGGGCACCGTCCTCCAAGATGCAGTCCTGGAATCACAGACTTTTATCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp ATGATGTTAAGTGGAGCTGATCCCGTTCCCACTCCTTaGCTCTTGGACCTGTGTACACTCCCTATTGAGGAA +
Preference number: 3 (lower is better)
Translates to: MMLSGADPVPTP*LLDLCTLPIEE
Trigger: TTCCTCAATAGGGAGTGTACACAGGTCCAAGAGCCAAGGAGTGGGAACGGGATCAGCTCCACTTAACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp CCAGGTTCAAGGAGCTGGTGTCGACCTCAACTCTCATaGGAGAAATATATAGCAGGCACACTGTGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: PGSRSWCRPQLS*EKYIAGTLWKR
Trigger: TCTCTTCCACAGTGTGCCTGCTATATATTTCTCCCATGAGAGTTGAGGTCGACACCAGCTCCTTGAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATTCCAGGACTGCATCTaGGAGGACGGTGCCCTGTGC +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEFQDCI*EDGALC
Trigger: GCACAGGGCACCGTCCTCCAAGATGCAGTCCTGGAA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 72 bp GATCTCAGACTGGACTTTCCTCTTTGGGAACTCCTATaGCCTCTACTCAGAAGACTGTCCTCTTGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: DLRLDFPLWELL*PLLRRLSSWLL
Trigger: AAGAAGCCAAGAGGACAGTCTTCTGAGTAGAGGGCATAGGAGTTCCCAAAGAGGAAAGTCCAGTCTGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp ACTCAAAGGATGGGGCAAGACTATAAGTGGGAGGAGTaGCAAGATCACACTGTAGAAGAGGAGATGAGATGG +
Preference number: 3 (lower is better)
Translates to: TQRMGQDYKWEE*QDHTVEEEMRW
Trigger: CCATCTCATCTCCTCTTCTACAGTGTGATCTTGCCACTCCTCCCACTTATAGTCTTGCCCCATCCTTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp GCCAACAAAACTCAAAGGATGGGGCAAGACTATAAGTaGGAGGAGTGGCAAGATCACACTGTAGAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: ANKTQRMGQDYK*EEWQDHTVEEE
Trigger: CTCCTCTTCTACAGTGTGATCTTGCCACTCCTCCCACTTATAGTCTTGCCCCATCCTTTGAGTTTTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp TTGGACTTCTCCTCCATGGCTCTTTGCTCTACCCTCTaGATCTTAGTTCTGCTCTCTGAGTCATCCATGGTT +
Preference number: 3 (lower is better)
Translates to: LDFSSMALCSTL*ILVLLSESSMV
Trigger: AACCATGGATGACTCAGAGAGCAGAACTAAGATCCAGAGGGTAGAGCAAAGAGCCATGGAGGAGAAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp TACTGGGTACCCATTACCAGTTCGGTGATTAGGGTTTaGTTCTGCTTTCTTGGACTTCTCCTCCATGGCTCT +
Preference number: 3 (lower is better)
Translates to: YWVPITSSVIRV*FCFLGLLLHGS
Trigger: AGAGCCATGGAGGAGAAGTCCAAGAAAGCAGAACCAAACCCTAATCACCGAACTGGTAATGGGTACCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGCTGAGATCATGCCATaGCATTCCAGCCTGGAGGAC +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMAEIMP*HSSLED
Trigger: GTCCTCCAGGCTGGAATGCAATGGCATGATCTCAGC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGCTGAGGCAAGGAAATaGCTTGAACCCAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMAEARK*LEPRRW
Trigger: CCACCTCCTGGGTTCAAGCAATTTCCTTGCCTCAGC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTCAGTTCCATCCCAGTaGCTGCAAATGACAGGATTT +
Preference number: 3 (lower is better)
Translates to: SFPLFPASGNHHQLYLHESVPSQ*LQMTGF
Trigger: AAATCCTGTCATTTGCAGCAACTGGGATGGAACTGA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGGTCAAGAGTTCCTTTaGGCCTCCAGCCTGATCTCA +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMGQEFL*ASSLIS
Trigger: TGAGATCAGGCTGGAGGCCAAAAGGAACTCTTGACC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGGTTGTCTCTTTATTTaGTTATTTCCTCGGCAGTAT +
Preference number: 3 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLGCLFI*LFPRQY
Trigger: ATACTGCCGAGGAAATAACAAAATAAAGAGACAACC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACTGATTGTGGTTAATTaGCATTTCTCTGATAAGTGG +
Preference number: 3 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLIVVN*HFSDKW
Trigger: CCACTTATCAGAGAAATGCAAATTAACCACAATCAG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGTGCAGATGGGACTCTaGAGGATGCAGTTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEVQMGL*RMQFLR
Trigger: CCTCAGGAACTGCATCCTCAAGAGTCCCATCTGCAC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp CTACAAGTGACTCACAAGCCAACAAAACTCAAAGGATaGGGCAAGACTATAAGTGGGAGGAGTGGCAAGATC +
Preference number: 3 (lower is better)
Translates to: LQVTHKPTKLKG*GKTISGRSGKI
Trigger: GATCTTGCCACTCCTCCCACTTATAGTCTTGCCCCATCCTTTGAGTTTTGTTGGCTTGTGAGTCACTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp TTCCTCCTAGTACTGCAGCTTCAAGGACTGCTTACATaGCAAATGAAGGATCTCTGCAATCAAGGCAGAAGC +
Preference number: 3 (lower is better)
Translates to: FLLVLQLQGLLT*QMKDLCNQGRS
Trigger: GCTTCTGCCTTGATTGCAGAGATCCTTCATTTGCCATGTAAGCAGTCCTTGAAGCTGCAGTACTAGGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp GCTCAGGGCCATTGGACTGCTTATATGGCTGCTGAATaGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAA +
Preference number: 3 (lower is better)
Translates to: AQGHWTAYMAAE*FKSVNSSDKME
Trigger: TTCCATCTTGTCACTGGAATTCACACTCTTGAACCATTCAGCAGCCATATAAGCAGTCCAATGGCCCTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTCAGCAATGTCAAAGTaGCCAAGTCTGACACTCCAC +
Preference number: 3 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFSAMSK*PSLTLH
Trigger: GTGGAGTGTCAGACTTGGCAACTTTGACATTGCTGA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCTGAGGTCAGGAGTTaGAGACCATCCTGGCCAAAA +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPEVRS*RPSWPK
Trigger: TTTTGGCCAGGATGGTCTCAAACTCCTGACCTCAGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp CTTGATGCTTCGAGAGACCAGAATGGGAGGATTGCTTaGGCCCTGGAGTTTGATACCTCCATCTCTATAAAT +
Preference number: 3 (lower is better)
Translates to: LDASRDQNGRIA*ALEFDTSISIN
Trigger: ATTTATAGAGATGGAGGTATCAAACTCCAGGGCTCAAGCAATCCTCCCATTCTGGTCTCTCGAAGCATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp AGAGCCCTCAGAAGGAACCAAAACCTGTCAATGCCTTaGTTTCAAACATGGAGGCTCCAGAACAGTAAGACA +
Preference number: 3 (lower is better)
Translates to: RALRRNQNLSMP*FQTWRLQNSKT
Trigger: TGTCTTACTGTTCTGGAGCCTCCATGTTTGAAATCAAGGCATTGACAGGTTTTGGTTCCTTCTGAGGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp TCCATAAATCCTACTGGGTACCCATTACCAGTTCGGTaGTTAGGGTTTGGTTCTGCTTTCTTGGACTTCTCC +
Preference number: 3 (lower is better)
Translates to: SINPTGYPLPVR*LGFGSAFLDFS
Trigger: GGAGAAGTCCAAGAAAGCAGAACCAAACCCTAATCACCGAACTGGTAATGGGTACCCAGTAGGATTTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp GGACTGCTTATATGGCTGCTGAATGGTTCAAGAGTGTaGATTCCAGTGACAAGATGGAAGCTGCATCACCTT +
Preference number: 3 (lower is better)
Translates to: GLLIWLLNGSRV*IPVTRWKLHHL
Trigger: AAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCATTCAGCAGCCATATAAGCAGTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp ACAGGCAAATTACAAGTCCACCCAGGTTCAAGGAGCTaGTGTCGACCTCAACTCTCATGGGAGAAATATATA +
Preference number: 3 (lower is better)
Translates to: TGKLQVHPGSRS*CRPQLSWEKYI
Trigger: TATATATTTCTCCCATGAGAGTTGAGGTCGACACCAGCTCCTTGAACCTGGGTGGACTTGTAATTTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGATACCTGTTAGACATTaGCATGTCTTCTCTGAGAAA +
Preference number: 3 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEIPVRH*HVFSEK
Trigger: TTTCTCAGAGAAGACATGCAAATGTCTAACAGGTAT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 72 bp TGGGTGTCAGTGCACCAAGTATATGCTGTAAGTAATTaGCCTTCACTGAACACCCTCAAAGGATTTCACAAG +
Preference number: 3 (lower is better)
Translates to: WVSVHQVYAVSN*PSLNTLKGFHK
Trigger: CTTGTGAAATCCTTTGAGGGTGTTCAGTGAAGGGCAATTACTTACAGCATATACTTGGTGCACTGACACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR GCA 72 bp CTTCAAGGACTGCTTACATGGCAAATGAAGGATCTCTaGAATCAAGGCAGAAGCCGCATGGCTTTTTATATC +
Preference number: 3 (lower is better)
Translates to: LQGLLTWQMKDL*NQGRSRMAFYI
Trigger: GATATAAAAAGCCATGCGGCTTCTGCCTTGATTGCAGAGATCCTTCATTTGCCATGTAAGCAGTCCTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTCATCCCAAATATGGTaGGTCTCTCTCCTCTCTGAT +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMSSQIW*VSLLSD
Trigger: ATCAGAGAGGAGAGAGACCAACCATATTTGGGATGA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATCACCAGCAACCTCCTaGATGACTTTTAGACTCTGC +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESPATS*MTFRLC
Trigger: GCAGAGTCTAAAAGTCATCAAGGAGGTTGCTGGTGA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTTGTAGACAGGGTTTaGTCACGTTGCCCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFFVDRV*SRCPGC
Trigger: ACACCCAGGGCAACGTGACAAAACCCTGTCTACAAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTGATTTCCTTTCTTTaGGCTTTTCACCCAGTAGTG +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLISFL*AFHPVV
Trigger: CACTACTGGGTGAAAAGCCAAAAGAAAGGAAATCAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGAAACCTGTCAATGCCTaGATTTCAAACATGGAGGCT +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMKPVNA*ISNMEA
Trigger: AGCCTCCATGTTTGAAATCAAGGCATTGACAGGTTT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp AGAGCCTCTCTATGTGGTTTCTCTATATGGATTATTTaGGATTTCCTCCTAGTACTGCAGCTTCAAGGACTG +
Preference number: 3 (lower is better)
Translates to: RASLCGFSIWII*DFLLVLQLQGL
Trigger: CAGTCCTTGAAGCTGCAGTACTAGGAGGAAATCTCAAATAATCCATATAGAGAAACCACATAGAGAGGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp CTGCTCTCTGAGTCATCCATGGTTTTTCATAAAATGTaGCCATGTTTGCAAGTGAGTATCCTTCTCAACCTC +
Preference number: 3 (lower is better)
Translates to: LLSESSMVFHKM*PCLQVSILLNL
Trigger: GAGGTTGAGAAGGATACTCACTTGCAAACATGGTCACATTTTATGAAAAACCATGGATGACTCAGAGAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp AAGATCCCAATGTCTCATCCCGTTATAATATCAGATTaGAGACCAGGATCTCATCGTCAAACTCTGCTACAG +
Preference number: 3 (lower is better)
Translates to: KIPMSHPVIISD*RPGSHRQTLLQ
Trigger: CTGTAGCAGAGTTTGACGATGAGATCCTGGTCTTCAATCTGATATTATAACGGGATGAGACATTGGGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp CTGCGAAGTTACATGATCACTTCCTCCACATTCTTTTaGCTACAAGTGACTCACAAGCCAACAAAACTCAAA +
Preference number: 3 (lower is better)
Translates to: LRSYMITSSTFF*LQVTHKPTKLK
Trigger: TTTGAGTTTTGTTGGCTTGTGAGTCACTTGTAGCCAAAAGAATGTGGAGGAAGTGATCATGTAACTTCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp TCTCTTAATAAGACTTTCTCTACTATGGGCTCTCAGTaGGCCTTTTGTGGGACCTCACCCTTAAAATTCTTA +
Preference number: 3 (lower is better)
Translates to: SLNKTFSTMGSQ*AFCGTSPLKFL
Trigger: TAAGAATTTTAAGGGTGAGGTCCCACAAAAGGCCCACTGAGAGCCCATAGTAGAGAAAGTCTTATTAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAAATAACACACTTTTATaGGGTCTTGGTGGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLENNTLL*GLGGGR
Trigger: TCTCCCTCCACCAAGACCCAATAAAAGTGTGTTATT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATGTGTACACTCCCTATaGAGGAATCACTACCAGATA +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLECVHSL*RNHYQI
Trigger: TATCTGGTAGTGATTCCTCAATAGGGAGTGTACACA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGATCATATACCCCACTTaGTTAACTACATGCTACCAA +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMIIYPT*LTTCYQ
Trigger: TTGGTAGCATGTAGTTAACAAAGTGGGGTATATGAT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGAGAACATGCAATATTaGTCTTTCTGTGCTTGGCTT +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEENMQY*SFCAWL
Trigger: AAGCCAAGCACAGAAAGACAAATATTGCATGTTCTC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGACTAGTATTGTTGAGTaGTCTCTCTTCATTTCTGTC +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMTSIVE*SLFISV
Trigger: GACAGAAATGAAGAGAGACAACTCAACAATACTAGT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTGCTTTGGTCAGTTTaGATAATGTGCAGTATTCTA +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLLWSV*IMCSIL
Trigger: TAGAATACTGCACATTATCAAAACTGACCAAAGCAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTTGCTTTTTCTGCTTaGGTCAGTTTTGATAATGTG +
Preference number: 3 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLAFSA*VSFDNV
Trigger: CACATTATCAAAACTGACCAAAGCAGAAAAAGCAAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTACATCCATCTGGGCTTaGCTATATTTCACTGAGGGA +
Preference number: 3 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFTSIWA*LYFTEG
Trigger: TCCCTCAGTGAAATATAGCAAAGCCCAGATGGATGT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp GAGGATGCAGTTCCTGAGGTGCTATTTCTCCCAATCTaGATGCCTGTGAAATATGAGACAAGTTATTTTCAT +
Preference number: 3 (lower is better)
Translates to: EDAVPEVLFLPI*MPVKYETSYFH
Trigger: ATGAAAATAACTTGTCTCATATTTCACAGGCATTCAGATTGGGAGAAATAGCACCTCAGGAACTGCATCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACTCCCAATCTGTGGGTaGTCTCTTTATTTTGTTATT +
Preference number: 3 (lower is better)
Translates to: QKFKIGSARQLFLRLDLELPICG*SLYFVI
Trigger: AATAACAAAATAAAGAGACAACCCACAGATTGGGAG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTCTCACGAATGCTCTaGAATCTTTCACCCAAACAG +
Preference number: 3 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFFSRML*NLSPKQ
Trigger: CTGTTTGGGTGAAAGATTCAAGAGCATTCGTGAGAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp CTGCAATGCTCTATGAATTCTACATATTTTCCTAAATaGGCAATCCCATCCCAGGGCATGTTTAGTGTAGAT +
Preference number: 3 (lower is better)
Translates to: LQCSMNSTYFPK*AIPSQGMFSVD
Trigger: ATCTACACTAAACATGCCCTGGGATGGGATTGCTCATTTAGGAAAATATGTAGAATTCATAGAGCATTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp TGGATGTTCTCAACAGAATTCTGGGACAAGAATGAATaGGTTCCCACATTTTCTGGTTCATGTACAAATGAA +
Preference number: 3 (lower is better)
Translates to: WMFSTEFWDKNE*VPTFSGSCTNE
Trigger: TTCATTTGTACATGAACCAGAAAATGTGGGAACTCATTCATTCTTGTCCCAGAATTCTGTTGAGAACATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp ATTTCTGAAAGCTTTTACACTCATCCCAAATATGGTTaGTCTCTCTCCTCTCTGATTTTTGACATGAGTGTA +
Preference number: 3 (lower is better)
Translates to: ISESFYTHPKYG*SLSSLIFDMSV
Trigger: TACACTCATGTCAAAAATCAGAGAGGAGAGAGACCAACCATATTTGGGATGAGTGTAAAAGCTTTCAGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CCA 72 bp GACAATATATCTGTGTTGTTTAAGCCATCCAGTTTGTaGTTCTTTGTTACGACAGTCCTAGACAACTTATAC +
Preference number: 3 (lower is better)
Translates to: DNISVLFKPSSL*FFVTTVLDNLY
Trigger: GTATAAGTTGTCTAGGACTGTCGTAACAAAGAACCACAAACTGGATGGCTTAAACAACACAGATATATTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTAATGACTTTAATTTTTaGTGTGTGACAGGGTCTCAC +
Preference number: 3 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFNDFNF*CVTGSH
Trigger: GTGAGACCCTGTCACACACAAAAAATTAAAGTCATT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp TTGTTATTTCCTCGGCAGTATGGAAGCTTCCCAGCTTaGTGTAATCCCAATTGTCTATTTATAATTGTTACA +
Preference number: 3 (lower is better)
Translates to: LLFPRQYGSFPA*CNPNCLFIIVT
Trigger: TGTAACAATTATAAATAGACAATTGGGATTACATCAAGCTGGGAAGCTTCCATACTGCCGAGGAAATAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR TCA 72 bp TTTATATATTGCCAACATCTACTCTATAGCCTTAAATaGAGCATCTGCAGTGCAAAGTCTATCAGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: FIYCQHLLYSLK*SICSAKSIRRV
Trigger: AACTCTTCTGATAGACTTTGCACTGCAGATGCTTCATTTAAGGCTATAGAGTAGATGTTGGCAATATATAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGCCTTTCCGTGGCCCTaGCTCGGGAGAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLAFPWP*LGRAGG
Trigger: GCCTCCTGCTCTCCCGAGTCAGGGCCACGGAAAGGC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATGGAGTGCAGTGATGTaGTCCCGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLWSAVM*SRLTAT
Trigger: GGTTGCAGTGAGCCGGGATCACATCACTGCACTCCA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAGCAGGAGGCTGATCTaGCCCCGTCCACGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLSRRLI*PRPRPG
Trigger: TCCGGGGCGTGGACGGGGCCAGATCAGCCTCCTGCT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCAGGCTGAAGTGCGGTaGCGTGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEQAEVR*RDLGSL
Trigger: CAGTGAGCCGAGATCACGCCACCGCACTTCAGCCTG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACTGGTGTATCTGAAGTaGTGCCTTCCTAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLVYLK*CLPRVG
Trigger: GCCTACCCTAGGAAGGCATCACTTCAGATACACCAG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCCTGCCTCAACCTCCTaGGTAGCTGGGATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEPASTS*VAGIAG
Trigger: ACCTGCAATCCCAGCTACTCAGGAGGTTGAGGCAGG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATTTTGGCCTCCAGCCTaGTCTCAGACTGGACTTTCC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLFWPPA*SQTGLS
Trigger: GGAAAGTCCAGTCTGAGATCAGGCTGGAGGCCAAAA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGACCTCCAGACCTTGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFDLQTL*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACAAGGTCTGGAGGTC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCTGAAGCGACACTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELKRHS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGTGTCGCTTCAG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp TTCCAGGACTGCATCTTGGAGGACGGTGCCCTGTGCTaGTCAAGTACTGCCACTAAGCTGGTACTTCAAACC +
Preference number: 4 (lower is better)
Translates to: FQDCILEDGALC*SSTATKLVLQT
Trigger: GGTTTGAAGTACCAGCTTAGTGGCAGTACTTGACAAGCACAGGGCACCGTCCTCCAAGATGCAGTCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAACACAGACCGCGCGTaGCTAGACAACCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLNTDRA*LDNLPV
Trigger: GACCGGGAGGTTGTCTAGTCACGCGCGGTCTGTGTT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATCAGGCTTGGTACCATaGTACCCCACTGATATCAGG +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSGLVP*YPTDIR
Trigger: CCTGATATCAGTGGGGTATCATGGTACCAAGCCTGA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAATGGGAGGATTGCTTaGGCCCTGGAGTTTGATACC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLNGRIA*ALEFDT
Trigger: GGTATCAAACTCCAGGGCTCAAGCAATCCTCCCATT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACAGTTCTGTTGCTTATaGGAGAGGGCTCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLQFCCL*ERAHRS
Trigger: GCTTCTGTGAGCCCTCTCTCATAAGCAACAGAACTG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGCACGGATGGATTTGTaGCTTTCCGTGGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEARMDL*LSVALT
Trigger: AGTCAGGGCCACGGAAAGGCACAAATCCATCCGTGC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCCGCCCGAAGACAGGTaGGGGACCAGGGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFPPEDR*GTRAPG
Trigger: GCCTGGGGCCCTGGTCCCGCACCTGTCTTCGGGCGG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACTCAAGCAATTTTCCTaGCTTGGCCTCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLKQFS*LGLLKL
Trigger: GAGCTTCAGGAGGCCAAGGCAGGAAAATTGCTTGAG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGCCAGGTACACCCGCTaGCCAGATTCCGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFARYTR*PDSGPL
Trigger: CAGTGGACCGGAATCTGGCCAGCGGGTGTACCTGGC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCCGGGGCCGAGTCGTTaGCAGGGACGCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFPGPSR*QGRRLL
Trigger: GAGGAGCCGGCGTCCCTGCCAACGACTCGGCCCCGG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCTGTCCGGAAACTGGTaGCCATCCCCACGCCCACGT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFLSGNW*PSPRPR
Trigger: ACGTGGGCGTGGGGATGGCCACCAGTTTCCGGACAG...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCCCGTTCCCACTCCTTaGCTCTTGGACCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEPVPTP*LLDLCT
Trigger: TGTACACAGGTCCAAGAGCCAAGGAGTGGGAACGGG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGGGAGAGCAGGAGGCTaGTCTGGCCCCGTCCACGCC +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFGRAGG*SGPVHA
Trigger: GGCGTGGACGGGGCCAGATCAGCCTCCTGCTCTCCC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGAACTCCCGACCTTGTaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFELPTL*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCACAAGGTCGGGAGTTC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACAAAACCATCATCACTaGTGGGTGTCAGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLQNHHH*WVSVHQ
Trigger: TTGGTGCACTGACACCCAGCAGTGATGATGGTTTTG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGAGTGAGCCGAGATTGTaGAATTCACTCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHESEPRL*NSLQPG
Trigger: CCCAGGCTGGAGTGAATTGCACAATCTCGGCTCACT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCCCAGAGGCGGAAGTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFPRGGS*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACTTCCGCCTCTGGG...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATCCTCCATGGCTCTTTaGTCTACCCTCTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSSMAL*STLWIL
Trigger: TAAGATCCAGAGGGTAGAGCAAAGAGCCATGGAGGA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAGCCTCCAGAGTAGCTaGGACCACAGCCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLSLQSS*DHSPKP
Trigger: TGGCTTAGGGCTGTGGTCCCAGCTACTCTGGAGGCT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGCAGCTCAGGGCCATTaGACTGCTTATATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEAAQGH*TAYMAA
Trigger: AGCAGCCATATAAGCAGTCCAATGGCCCTGAGCTGC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGCTGCGGAGAGACCGTaGGGGATGCGTCCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFAAERP*GMRPPE
Trigger: TTCGGGCGGACGCATCCCTCACGGTCTCTCCGCAGC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGGTTTGACTTGGCACTaGAGGCTCTTTCACATTTAC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLGLTWH*RLFHIY
Trigger: GTAAATGTGAAAGAGCCTTCAGTGCCAAGTCAAACC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAGTGGGCAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLSGQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGCCCACT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGTAATTGCCCTTCACTaGACACCCTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLVIALH*TPSKDF
Trigger: GAAATCCTTTGAGGGTGTTCAGTGAAGGGCAATTAC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACCAGATAAAAGTCTGTaGTTCCAGGACTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLPDKSL*FQDCIL
Trigger: CAAGATGCAGTCCTGGAATCACAGACTTTTATCTGG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCAGGCTGGAGTGCAGTaGTGTGATCCCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMQAGVQ*CDPGSL
Trigger: CAGTGAGCCGGGATCACATCACTGCACTCCAGCCTG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGTGGAAACAAATTACTaGCTGGGGTCATTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLVETNY*LGSFLR
Trigger: TCTGAGGAATGACCCCAGGCAGTAATTTGTTTCCAC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGGATTACAGGTGCCTaGCACCACGCCTGGGTAATT +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGITGA*HHAWVI
Trigger: AATTACCCAGGCGTGGTGGCAGGCACCTGTAATCCC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGCTCATGTCAATCAATaGACAACAGGCATGGAACTG +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLAHVNQ*TTGMEL
Trigger: CAGTTCCATGCCTGTTGTCCATTGATTGACATGAGC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGACTTTTATTGGGTCTTaGTGGAGGGAGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHETFIGS*WRERAE
Trigger: CTCAGCCCTCTCCCTCCACCAAGACCCAATAAAAGT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGACTTTCTCTACTATaGGCTCTCAGTGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLRLSLL*ALSGPF
Trigger: AAAAGGCCCACTGAGAGCCCATAGTAGAGAAAGTCT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATGGGACAAGAATGAATaGGTTCCCACATTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLWDKNE*VPTFSG
Trigger: ACCAGAAAATGTGGGAACTCATTCATTCTTGTCCCA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGAAGTTGCAGTGAGCTaGGATCATGCCATTGCATTC +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEEVAVS*DHAIAF
Trigger: GAATGCAATGGCATGATCTCAGCTCACTGCAACTTC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGCAGGTGGATTACCTaGGGTCAGGAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGRWIT*GQEFKT
Trigger: GGTCTTGAATTCCTGACCTCAGGTAATCCACCTGCC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCCCTGTCATCCAGGCTaGAACACAATCATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLPCHPG*NTIMAH
Trigger: GTGAGCCATGATTGTGTTTCAGCCTGGATGACAGGG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGCTGCAGTGAGCTATaGTCATGCAACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGCSEL*SCNCTP
Trigger: TGGAGTGCAGTTGCATGATCATAGCTCACTGCAGCC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATATTTTCAGTTGCTTTaGGGAGCCTCCATACTGTTC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLYFQLL*GASILF
Trigger: GAACAGTATGGAGGCTCCTCAAAGCAACTGAAAATA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGGGAGCATATGGGGCTaGACAAGCATCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEGSIWG*TSISLC
Trigger: ACATAAAGAGATGCTTGTTCAGCCCCATATGCTCCC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGATTCAGGAGAGGTCTaGCTGAGCCGTTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFDSGEV*LSRSGS
Trigger: TGACCCAGAACGGCTCAGTCAGACCTCTCCTGAATC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTCACCCAGGCTGGAGTaGAATGGCGCAATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFSPRLE*NGAISA
Trigger: AGCAGAGATTGCGCCATTGCACTCCAGCCTGGGTGA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCTTTGGGAACTCCTATaGCCTCTACTCAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELWELL*PLLRRL
Trigger: CAGTCTTCTGAGTAGAGGGCATAGGAGTTCCCAAAG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACTTGTGGCTTTAAGTTaGCATCTAGAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLVALS*HLEPFP
Trigger: AGGAAATGGCTCTAGATGGCAACTTAAAGCCACAAG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGGGAGGTGGGAGAATTaGTTGAAGCCAAGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEGRWEN*LKPRVQ
Trigger: TTGAACTCTTGGCTTCAAGCAATTCTCCCACCTCCC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAATTAGGGTTTGGTTCTaGTTTCTTGGACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLIRVWF*FLGLLL
Trigger: GAGGAGAAGTCCAAGAAAGCAGAACCAAACCCTAAT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAGCTGGTCAAGTCTCTaGTCTGCCCAGGATAATCCG +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLSWSSL*SAQDNP
Trigger: CGGATTATCCTGGGCAGACCAGAGACTTGACCAGCT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGCATCCTTGACCTCCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFASLTS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGGAGGTCAAGGATGC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCAGGCTGGAGTGCAGTaGTACAAATATGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEQAGVQ*YKYGLL
Trigger: CAGTAAGCCATATTTGTACCACTGCACTCCAGCCTG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAATAAAATAGCCAGGTaGGAGGTGGGAGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLNKIAR*EVGELL
Trigger: AAGCAATTCTCCCACCTCCCACCTGGCTATTTTATT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATCGGTGATTAGGGTTTaGTTCTGCTTTCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSVIRV*FCFLGL
Trigger: AAGTCCAAGAAAGCAGAACCAAACCCTAATCACCGA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAACTTCTGCTTGGAGCTaGGTTTTGTGTCAAACTTTT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLTSAWS*VLCQTF
Trigger: AAAAGTTTGACACAAAACTCAGCTCCAAGCAGAAGT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCTCTCAGATGTGCAGTaGGCTGTTCCTTCCTACCAA +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLSDVQ*AVPSYQ
Trigger: TTGGTAGGAAGGAACAGCTCACTGCACATCTGAGAG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTACCAAGGCAACAACTaGTCAGTTAAAGCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEYQGNN*SVKALR
Trigger: CCTAAGGGCTTTAACTGATCAGTTGTTGCCTTGGTA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGACGTTATTATTTCTaGTGGTTCCTGTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLRRYYF*WFLFVR
Trigger: CCTGACAAACAGGAACCATCAGAAATAATAACGTCT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCCCACTGGGTTTTACTaGTATTTTACTCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEPTGFY*YFTQGP
Trigger: AGGCCCTTGAGTAAAATATCAGTAAAACCCAGTGGG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGCATCTCTCACTCTTaGTGTAGTCTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGISHS*CSLCVS
Trigger: GCTCACACACAGACTACATCAAGAGTGAGAGATGCC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTAGGAGGAGGCTGCAGTaGGCCAGGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFRRRLQ*ARIVPL
Trigger: CAGTGGCACGATCCTGGCTCACTGCAGCCTCCTCCT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCCATCTGGACAGCTCTaGCTGGAAATTTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEPSGQL*LEILAF
Trigger: AAATGCCAAAATTTCCAGGCAGAGCTGTCCAGATGG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAGTGAGCTGAGATCATaGCATTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLSELRS*HCIPAW
Trigger: CCAGGCTGGAATGCAATGGCATGATCTCAGCTCACT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAACTGTGCCATGGCTGTaGAAAAGCAGTCAAATAATA +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLTVPWL*KSSQII
Trigger: TATTATTTGACTGCTTTTGCACAGCCATGGCACAGT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGGGACTACAGGTGTCTaGCACCACACCCCGCTAACT +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEGTTGV*HHTPLT
Trigger: AGTTAGCGGGGTGTGGTGGCAGACACCTGTAGTCCC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGTGATCCCGGCTCACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFVIPAH*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTGAGCCGGGATCAC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGGCCTTTCAGATTCTaGTCATCATCCAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGPFRF*SSSSAK
Trigger: CTTGGCACTGGATGATGAGCAGAATCTGAAAGGCCC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCTGGCCTATTTCTGCTaGATTCTGTTGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLAYFC*ILLATG
Trigger: GCCTGTAGCCAACAGAATGCAGCAGAAATAGGCCAG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCAGGATCGTGCCACTaGACTCCAGCCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPGSCH*TPAWER
Trigger: TCTTTCCCAGGCTGGAGTGCAGTGGCACGATCCTGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGACGGAAGTGTTTAGCTaGTCAAGTCTCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLTEVFS*SSLWSA
Trigger: GGCAGACCAGAGACTTGACCAGCTAAACACTTCCGT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGACAACCTCCCGGTCTaGGTACCAGGAGTCGCACGG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFDNLPV*VPGVAR
Trigger: CCGTGCGACTCCTGGTACCCAGACCGGGAGGTTGTC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGTTCTTCCCAGCCATCTaGACAGCTCTGCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLFFPAI*TALPGN
Trigger: ATTTCCAGGCAGAGCTGTCCAGATGGCTGGGAAGAA...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGAATGTGACTTTCCATaGAACACACTTTCAATGGGA +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLECDFP*NTLSMG
Trigger: TCCCATTGAAAGTGTGTTCCATGGAAAGTCACATTC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGTTCGAGAGACCAGAATaGGAGGATTGCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLFERPE*EDCLSP
Trigger: AGGGCTCAAGCAATCCTCCCATTCTGGTCTCTCGAA...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAAGTTGTCCTTTTTATaGGTTGGTCCAGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLKLSFL*VGPVTL
Trigger: AAGAGTGACTGGACCAACCCATAAAAAGGACAACTT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAATGTATAATCAGCTGTaGTTTTCCACAAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLMYNQL*FSTKGS
Trigger: AGAGCCTTTTGTGGAAAATCACAGCTGATTATACAT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGATGTTCACTGAGAGATaGCTTCTGAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEMFTER*LLSEGF
Trigger: AAAGCCTTCACTCAGAAGTCATCTCTCAGTGAACAT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACTCCTCTCTGATTTTTaGCATGAGTGTAATTTTAGG +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLLSDF*HECNFR
Trigger: CCTAAAATTACACTCATGTCAAAAATCAGAGAGGAG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCAGGTGGAAGTTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFRWKLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAACTTCCACCT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATTTTACTGTTGCTATTaGGAAGTCAACCTAAGCATG +
Preference number: 4 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLFYCCY*EVNLSM
Trigger: CATGCTTAGGTTGACTTCTCAATAGCAACAGTAAAA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGAATGGTTCAAGAGTGTaGATTCCAGTGACAAGATGG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHENGSRV*IPVTRW
Trigger: CCATCTTGTCACTGGAATTCACACTCTTGAACCATT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTAGAGACCGTGAGGGATaGGTCCGCCCGAAGACAGGT +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFRDREG*VRPKTG
Trigger: ACCTGTCTTCGGGCGGACGCATCCCTCACGGTCTCT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTATGCTGTAAGTAATTaGCCTTCACTGAACACCCTC +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEYAVSN*PSLNTL
Trigger: GAGGGTGTTCAGTGAAGGGCAATTACTTACAGCATA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGATTGCTTGAGCCCTaGAGTTTGATACCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGLLEP*SLIPPS
Trigger: AGATGGAGGTATCAAACTCCAGGGCTCAAGCAATCC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGAAATGTATAAGCATTaGCAGGGCACAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLEMYKH*QGTVAH
Trigger: GTGAGCCACTGTGCCCTGCCAATGCTTATACATTTC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGGGGTTTCACCATGTTaGCCAGGTTGTTCTCAAACG +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFGVSPC*PGCSQT
Trigger: CGTTTGAGAACAACCTGGCCAACATGGTGAAACCCC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTCCTCCACATTCTTTTaGCTACAAGTGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHESSTFF*LQVTHK
Trigger: CTTGTGAGTCACTTGTAGCCAAAAGAATGTGGAGGA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGTTGGTTCTGCTTTCTTaGACTTCTCCTCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLVLLS*TSPPWL
Trigger: GAGCCATGGAGGAGAAGTCCAAGAAAGCAGAACCAA...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp CCACTCCTTGGCTCTTGGACCTGTGTACACTCCCTATaGAGGAATCACTACCAGATAAAAGTCTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: PLLGSWTCVHSL*RNHYQIKVCDS
Trigger: GGAATCACAGACTTTTATCTGGTAGTGATTCCTCAATAGGGAGTGTACACAGGTCCAAGAGCCAAGGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGATGTATAACAAGGTATaGCTTGCTGCTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEMYNKV*LAAESL
Trigger: AAGGCTTTCAGCAGCAAGTCATACCTTGTTATACAT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTTATCCGAAGTCTCCTaGACATCAGTTTCTCACATT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELSEVS*TSVSHI
Trigger: AATGTGAGAAACTGATGTTCAGGAGACTTCGGATAA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGATGAAGCATCTGCAGTaGAAAGTCTATCAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEMKHLQ*KVYQKS
Trigger: ACTCTTCTGATAGACTTTGCACTGCAGATGCTTCAT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCACAAATATGGCTTACTaGAGCTTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFTNMAY*SFNLLG
Trigger: GCCCAGGAGGTTGAAGCTGCAGTAAGCCATATTTGT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTAATCCTAGCCACTTaGGAGGCTGAGGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVILAT*EAEARK
Trigger: TTTCCTTGCCTCAGCCTCCCAAGTGGCTAGGATTAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGTTAAAACCATCATCATaGTCAGGCATGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLKPSS*SGMVAH
Trigger: GTGAGCCACCATGCCTGACCATGATGATGGTTTTAA...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGCCATAAGCCAGTGTTaGATCTGGTCTTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMAISQC*IWSCLS
Trigger: GCTAAGGCAAGACCAGATCCAACACTGGCTTATGGC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCACTCCTTGGCTCTTaGACCTGTGTACACTCCCTA +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPLLGS*TCVHSL
Trigger: TAGGGAGTGTACACAGGTCCAAGAGCCAAGGAGTGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTGTATGAGCATAGGTTaGAGGCATAATTTCTCGACA +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHECMSIG*RHNFST
Trigger: TGTCGAGAAATTATGCCTCCAACCTATGCTCATACA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCTGACTGAGCCGTTCTaGGTCAGAATTTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFLTEPF*VRISHG
Trigger: TCCATGAGAAATTCTGACCCAGAACGGCTCAGTCAG...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGACTCCTATTCAAAAATaGGGACAAGAGGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLTPIQK*GQEEAQ
Trigger: CTGTGCCTCCTCTTGTCCCCATTTTTGAATAGGAGT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCATGGACAATGAGCTGTaGCCTGAAAGAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFMDNEL*PEREDL
Trigger: AAGGTCTTCTCTTTCAGGTCACAGCTCATTGTCCAT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCTGATTTCTCATTTATaGGTCTTCCGATGTATACGA +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELISHL*VFRCIR
Trigger: TCGTATACATCGGAAGACTCATAAATGAGAAATCAG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCTCTATAGCCTTAAATaGAGCATCTGCAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLYSLK*SICSAK
Trigger: CTTTGCACTGCAGATGCTTCATTTAAGGCTATAGAG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCACATATTTTCCTAAATaGGCAATCCCATCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFTYFPK*AIPSQG
Trigger: GCCCTGGGATGGGATTGCTCATTTAGGAAAATATGT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGCACTTCAACCTTGGTaGCAGAGTGAGATTCCGTCT +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEALQPW*QSEIPS
Trigger: AGACGGAATCTCACTCTGTCACCAAGGTTGAAGTGC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTTTTTGTTTATTCATTaGAGGGGGTCAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFFLFIH*RGSGGT
Trigger: GGTGCCTCCTGACCCCCTTCAATGAATAAACAAAAA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGTTATAATATCAGATTaGAGACCAGGATCTCATCGT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEVIISD*RPGSHR
Trigger: ACGATGAGATCCTGGTCTTCAATCTGATATTATAAC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGAGGTTGCCATGAGCTaGAATTATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEEVAMS*NYATAL
Trigger: GAGTGCAGTGGCATAATTTCAGCTCATGGCAACCTC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCAACAATGGGTAAAATaGTCACCTGTAGCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLQQWVK*SPVASG
Trigger: TCCACTAGCTACAGGTGAGCATTTTACCCATTGTTG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCAAATGAAGGATCTCTaGAATCAAGGCAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMQMKDL*NQGRSR
Trigger: GCGGCTTCTGCCTTGATTGCAGAGATCCTTCATTTG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCACCTGGCCTATTTCTaGTGCATTCTGTTGGCTACA +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMHLAYF*CILLAT
Trigger: TGTAGCCAACAGAATGCAGCAGAAATAGGCCAGGTG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCAGGAGTCGCACGGATaGATTTGTGCCTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFQESHG*ICAFPW
Trigger: CCACGGAAAGGCACAAATCCATCCGTGCGACTCCTG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGACCATTATCCAACAATaGGTAAAATGCTCACCTGTA +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHETIIQQ*VKCSPV
Trigger: TACAGGTGAGCATTTTACCCATTGTTGGATAATGGT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGAACCATCATCACTGCTaGGTGTCAGTGCACCAAGTA +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMNHHHC*VSVHQV
Trigger: TACTTGGTGCACTGACACCCAGCAGTGATGATGGTT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAAGCCAGTGTTGGATCTaGTCTTGCCTTAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESQCWI*SCLSCY
Trigger: GTAGCAGCTAAGGCAAGACCAGATCCAACACTGGCT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCAGAGCCTCTCTATGTaGTTTCTCTATATGGATTAT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEQSLSM*FLYMDY
Trigger: ATAATCCATATAGAGAAACCACATAGAGAGGCTCTG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGGTCAGAATTTCTCATaGAGCCAGAAAGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFGQNFS*SQKGME
Trigger: TTCCATGCCTTTCTGGCTCCATGAGAAATTCTGACC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTCAGTGGGCCTTTTGTaGGACCTCACCCTTAAAATT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFSVGLL*DLTLKI
Trigger: AATTTTAAGGGTGAGGTCCCACAAAAGGCCCACTGA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCGACCTCAACTCTCATaGGAGAAATATATAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFRPQLS*EKYIAG
Trigger: GCCTGCTATATATTTCTCCCATGAGAGTTGAGGTCG...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAAAATTAGCCAAGTATaGTGGCGAGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLKISQV*WRAPVI
Trigger: GATTACAGGTGCTCGCCACCATACTTGGCTAATTTT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp TTTCTGGTTCTCTCAGCTTATTCTTGTGGCTTTAAGTaGCCATCTAGAGCCATTTCCTTACCCCAACACGAC +
Preference number: 4 (lower is better)
Translates to: FLVLSAYSCGFK*PSRAISLPQHD
Trigger: GTCGTGTTGGGGTAAGGAAATGGCTCTAGATGGCAACTTAAAGCCACAAGAATAAGCTGAGAGAACCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp TCTCTCAAGTCCTTAGAAGTCCTTTTTGTTTATTCATaGAAGGGGGTCAGGAGGCACCGCTTCAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: SLKSLEVLFVYS*KGVRRHRFRSF
Trigger: GAAAGATCTGAAGCGGTGCCTCCTGACCCCCTTCAATGAATAAACAAAAAGGACTTCTAAGGACTTGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCCTCTCAAGCTCATCTTaGTTGTTCTGGTACCATTCT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFLSSSS*LFWYHS
Trigger: AGAATGGTACCAGAACAATCAAGATGAGCTTGAGAG...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGATAGAGTCTCTGTCTTaGAGAATCATGGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLIESLS*RIMGFA
Trigger: AGCAAAACCCATGATTCTTCAAGACAGAGACTCTAT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGTTTTCTGGTGTATCTaGAGTGATGCCTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEVFWCI*SDAFLG
Trigger: CCCTAGGAAGGCATCACTTCAGATACACCAGAAAAC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTATTCCTGAGCTCAAGTaGTCCTCCTGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFIPELK*SSCLPK
Trigger: CTTTGGGAGGCAGGAGGATCACTTGAGCTCAGGAAT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGATGTTAAGTGGAGCTaGTCCCGTTCCCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFDVKWS*SRSHSL
Trigger: CAAGGAGTGGGAACGGGATCAGCTCCACTTAACATC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAAGTTCAAGGCTGCAGTaGGCTATGATCATGCAACTG +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESSRLQ*AMIMQL
Trigger: CAGTTGCATGATCATAGCTCACTGCAGCCTTGAACT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGTGCAGGTGTCTCTTTaGTGTACTGATTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFVQVSL*CTDFLS
Trigger: AGAAAGGAAATCAGTACATCAAAGAGACACCTGCAC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCTATCACTGAGGTCATaGGGTACATCTTCTATTTTC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLSLRS*GTSSIF
Trigger: GAAAATAGAAGATGTACCTCATGACCTCAGTGATAG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTCTCAACCTCCTTCCTaGGCAAAAAGGTTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMSQPPS*AKRLRV
Trigger: AACTCTCAACCTTTTTGCTCAGGAAGGAGGTTGAGA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACCATTACCAGTTCGGTaGTTAGGGTTTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEPLPVR*LGFGSA
Trigger: AGCAGAACCAAACCCTAATCACCGAACTGGTAATGG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGATGTAGTCTGTGTGTaGGCTAGTTTGGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMDVVCV*ASLGFL
Trigger: AAGAAAGCCCAAACTAGCTCACACACAGACTACATC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTGGGATTGCAGGTGTaGACCGCTGTAACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLGLQV*TAVTSF
Trigger: AAAGCTGGTTACAGCGGTGCACACCTGCAATCCCAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTAGCTGGAATTACAGGTaGACGTCACCACCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFSWNYR*TSPPWL
Trigger: TAGCCAGGGTGGTGACGTGCACCTGTAATTCCAGCT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCACTCATCCCAAATATaGTTGGTCTCTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMHSSQI*LVSLLS
Trigger: AGAGAGGAGAGAGACCAACCATATTTGGGATGAGTG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCACTGTTGCCCAGACTaGAGTACAGTGCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFHCCPD*STVQLT
Trigger: AGTGAGCTGCACTGTACTCCAGTCTGGGCAACAGTG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGCAGTGGTACAAATATaGCTTACTGCAGCTTCAACC +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMAVVQI*LTAAST
Trigger: GGTTGAAGCTGCAGTAAGCCATATTTGTACCACTGC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTGAGCCACCACGCCTaGCCTATAATTATTAATCAG +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVSHHA*PIIINQ
Trigger: CTGATTAATAATTATAGGCCAGGCGTGGTGGCTCAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGTCATATACAAATGTATaGCGAAAGAGACCTGGATTT +
Preference number: 4 (lower is better)
Translates to: SFPLFPASGNHHQLYLHESYTNV*RKRPGF
Trigger: AAATCCAGGTCTCTTTCGCCATACATTTGTATATGA...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTATTATCCAGGCGTGGTaGCAGGTGCCCGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFIIQAW*QVPVIS
Trigger: TGAGATTACGGGCACCTGCCACCACGCCTGGATAAT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCACCATGATACCCCACTaGTATCAGGTTATGATAGTT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFTMIPH*YQVMIV
Trigger: AACTATCATAACCTGATATCAGTGGGGTATCATGGT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAATGAGCATTAAGGTTTaGCTTGGCACTGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEMSIKV*LGTEGS
Trigger: AGAGCCTTCAGTGCCAAGTCAAACCTTAATGCTCAT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTTCAAATCTGGAATGTaGCTTTCCATGGAACACACT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFFKSGM*LSMEHT
Trigger: AGTGTGTTCCATGGAAAGTCACATTCCAGATTTGAA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGACTGAGGGAAGCTTTTaGTACTCCAATTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLTEGSF*YSNSIL
Trigger: CAAAATTGAATTGGAGTATCAAAAGCTTCCCTCAGT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACAGAGAAAACAGGGGTaGTCATGTCAATCAATGGAC +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEQRKQG*SCQSMD
Trigger: GTCCATTGATTGACATGAGCACCCCTGTTTTCTCTG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGTACCTGTTAGACATTTaGATGTCTTCTCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLYLLDI*MSSLRN
Trigger: GTTTCTCAGAGAAGACATGCAAATGTCTAACAGGTA...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCATCCATCTGGGCTTTaGTATATTTCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMHPSGL*YISLRE
Trigger: TTCCCTCAGTGAAATATAGCAAAGCCCAGATGGATG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCATGAGCTGAAATTATaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFHELKL*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATAATTTCAGCTCATG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATACTCAACTGTGCCATaGCTGTGCAAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEYSTVP*LCKSSQ
Trigger: TTGACTGCTTTTGCACAGCCATGGCACAGTTGAGTA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGATAACACACTTTTATTaGGTCTTGGTGGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMITHFY*VLVEGE
Trigger: CTCTCCCTCCACCAAGACCCAATAAAAGTGTGTTAT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGTATTGGACATCCATCTaGGCTTTGCTATATTTCACT +
Preference number: 4 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLYWTSI*ALLYFT
Trigger: AGTGAAATATAGCAAAGCCCAGATGGATGTCCAATA...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTCCTTTTTATGGGTTaGTCCAGTCACTCTTCTACA +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVLFMG*SSHSST
Trigger: TGTAGAAGAGTGACTGGACCAACCCATAAAAAGGAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp CAGAGCCTCTCTATGTGGTTTCTCTATATGGATTATTaGAGATTTCCTCCTAGTACTGCAGCTTCAAGGACT +
Preference number: 4 (lower is better)
Translates to: QSLSMWFLYMDY*RFPPSTAASRT
Trigger: AGTCCTTGAAGCTGCAGTACTAGGAGGAAATCTCAAATAATCCATATAGAGAAACCACATAGAGAGGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp CAAGATCCCAATGTCTCATCCCGTTATAATATCAGATaGAAGACCAGGATCTCATCGTCAAACTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: QDPNVSSRYNIR*KTRISSSNSAT
Trigger: TGTAGCAGAGTTTGACGATGAGATCCTGGTCTTCAATCTGATATTATAACGGGATGAGACATTGGGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCATGTACAATGAGCTGTaGCTTACAACGAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFMYNEL*LTTKSF
Trigger: AAAGCTTTTCGTTGTAAGTCACAGCTCATTGTACAT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGATTCTGGGACAAGAATaGATGAGTTCCCACATTTTC +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMILGQE*MSSHIF
Trigger: GAAAATGTGGGAACTCATTCATTCTTGTCCCAGAAT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACTTAGTTCTGCTCTCTaGGTCATCCATGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLELSSAL*VIHGFS
Trigger: TGAAAAACCATGGATGACTCAGAGAGCAGAACTAAG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGAGTTCTATTTTCAGTTaGTTTGAGGAGCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMSSIFS*FEEPPY
Trigger: GTATGGAGGCTCCTCAAAGCAACTGAAAATAGAACT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAACATCCCAAATATGGTTaGTCTCTCTCCTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEHPKYG*SLSSLI
Trigger: AATCAGAGAGGAGAGAGACCAACCATATTTGGGATG...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGGTAAAAATAAGCCATaGGGAACTGGCAGAATAAGC +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEGKNKP*GTGRIS
Trigger: GCTTATTCTGCCAGTTCCCCATGGCTTATTTTTACC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGCTCAAAGAGATATGTTaGGGTCCTAATTTCCATACC +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMLKEIC*GPNFHT
Trigger: GGTATGGAAATTAGGACCCCAACATATCTCTTTGAG...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAATGTATACGAAGCCCTaGATTCCAACAGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEMYTKP*IPTEGF
Trigger: AAATCCTTCTGTTGGAATTCAGGGCTTCGTATACAT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGCCAAATATACTATTTaGTTCCCACCACCTCACTCC +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFAKYTI*FPPPHS
Trigger: GGAGTGAGGTGGTGGGAATCAAATAGTATATTTGGC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTAGATTAAGTCAGGCTTaGTACCATGATACCCCACTG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFRLSQA*YHDTPL
Trigger: CAGTGGGGTATCATGGTACCAAGCCTGACTTAATCT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGACATTATTTCACCCTaGTTTGTGAATAACCCTTCT +
Preference number: 4 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMDIISP*FVNNPS
Trigger: AGAAGGGTTATTCACAAACCAGGGTGAAATAATGTC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTTTGCTCTACCCTCTaGATCTTAGTTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLCSTL*ILVLLS
Trigger: AGAGAGCAGAACTAAGATCCAGAGGGTAGAGCAAAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTATAGCAGGCACACTGTaGAAGAGAATGTGTGATAGG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFIAGTL*KRMCDR
Trigger: CCTATCACACATTCTCTTCCACAGTGTGCCTGCTAT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAATTCCAGTGACAAGATaGAAGCTGCATCACCTTTTA +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEIPVTR*KLHHLL
Trigger: TAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAAT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTTCACCCTGGTTTGTaGATAACCCTTCTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFFHPGL*ITLLGR
Trigger: TCTACCTAGAAGGGTTATTCACAAACCAGGGTGAAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATTTGCTATATTTCACTaGGGGAAGCTTTTGATACTC +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEFAIFH*GKLLIL
Trigger: GAGTATCAAAAGCTTCCCTCAGTGAAATATAGCAAA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTTTGTTCTTCCCCTTaGCATAAGCCAGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFFCSSP*HKPVLD
Trigger: ATCCAACACTGGCTTATGGCAAGGGGAAGAACAAAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGTGAGTCACCACACCTaGCCTCTTTTTAATGATTTG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFVSHHT*PLFNDL
Trigger: CAAATCATTAAAAAGAGGCCAGGTGTGGTGACTCAC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTATAAGTGGGAGGAGTaGCAAGATCACACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFYKWEE*QDHTVE
Trigger: TTCTACAGTGTGATCTTGCCACTCCTCCCACTTATA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTCTGCTGCATTCTGTTaGCTACAGGCAAATTACAAG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFSAAFC*LQANYK
Trigger: CTTGTAATTTGCCTGTAGCCAACAGAATGCAGCAGA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp TTGGATTACATCTTTTCCCTGAGGAGCTTTCGTACTTaGAGAATGCTTTACAAGCTGAAAAGACTGTTTACC +
Preference number: 4 (lower is better)
Translates to: LDYIFSLRSFRT*RMLYKLKRLFT
Trigger: GGTAAACAGTCTTTTCAGCTTGTAAAGCATTCTCAAAGTACGAAAGCTCCTCAGGGAAAAGATGTAATCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTTTATACTCCACCATaGAGTCAACTGTTCATACCA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLYTPP*SQLFIP
Trigger: TGGTATGAACAGTTGACTTCATGGTGGAGTATAAAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTGGGTGTTGTCATGCTaGGAAGTTTTGATACATTAC +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFWVLSC*EVLIHY
Trigger: GTAATGTATCAAAACTTCTCAGCATGACAACACCCA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTATTTCTCCCAATCTaGATGCCTGTGAAATATGAG +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLFLPI*MPVKYE
Trigger: CTCATATTTCACAGGCATTCAGATTGGGAGAAATAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTGGACAGCTCTGCCTaGAAATTTTGGCATTTATTA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLDSSA*KFWHLL
Trigger: TAATAAATGCCAAAATTTCCAGGCAGAGCTGTCCAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTACACAGCTTCAAATCTaGAATGTGACTTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFTQLQI*NVTFHG
Trigger: TCCATGGAAAGTCACATTCCAGATTTGAAGCTGTGT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATTGCTTTTTCTGCTTTaGTCAGTTTTGATAATGTGC +
Preference number: 4 (lower is better)
Translates to: QKFKIGSARQLFLRLDLELLFLL*SVLIMC
Trigger: GCACATTATCAAAACTGACCAAAGCAGAAAAAGCAA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR TCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGTCTCTTTGATGTACTaGTTTCCTTTCTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFVSLMY*FPFFWL
Trigger: AAGCCAAAAGAAAGGAAATCAGTACATCAAAGAGAC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR GCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTACCAAAACCTGTCAATaGCTTGATTTCAAACATGGA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFTKTCQ*LDFKHG
Trigger: TCCATGTTTGAAATCAAGGCATTGACAGGTTTTGGT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CCA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTATGGCGAAAGAGACCTaGATTTCATTTACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFMAKET*ISFTQK
Trigger: TTTCTGAGTAAATGAAATCCAGGTCTCTTTCGCCAT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
3UTR CAA 72 bp ATTGAAAGTGGGATATTAAGTCTCCAACTAGTATTGTaGAGTTGTCTCTCTTCATTTCTGTCAGATTTTGCT +
Preference number: 4 (lower is better)
Translates to: IESGILSLQLVL*SCLSSFLSDFA
Trigger: AGCAAAATCTGACAGAAATGAAGAGAGACAACTCAACAATACTAGTTGGAGACTTAATATCCCACTTTCAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS GCA 90 bp GCCTGCGGGGGCAGGACCCGCGGGCTGCGGAGAGACCGTGAGGGATaGGTCCGCCCGAAGACAGGTGCGGGACCAGGGCCCCAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ACGGRTRGLRRDREG*VRPKTGAGPGPQAP
Trigger: AGGAGCCTGGGGCCCTGGTCCCGCACCTGTCTTCGGGCGGACGCATCCCTCACGGTCTCTCCGCAGCCCGCGGGTCCTGCCCCCGCAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS GCA 90 bp CACGCCCACGTTCGCGCGCTGCCTGCGGGGGCAGGACCCGCGGGCTaGGGAGAGACCGTGAGGGATGCGTCCGCCCGAAGACAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: HAHVRALPAGAGPAG*GETVRDASARRQVR
Trigger: CCGCACCTGTCTTCGGGCGGACGCATCCCTCACGGTCTCTCCGCAGCCCGCGGGTCCTGCCCCCGCAGGCAGCGCGCGAACGTGGGCGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS TCA 90 bp GCAGGGACGCCGGCTCCTCAGCTCTCGCCCAACACAGACCGCGCGTaGCTAGACAACCTCCCGGTCTGGGTACCAGGAGTCGCACGGATG +
Preference number: 5 (lower is better)
Translates to: AGTPAPQLSPNTDRA*LDNLPVWVPGVARM
Trigger: CATCCGTGCGACTCCTGGTACCCAGACCGGGAGGTTGTCTAGTCACGCGCGGTCTGTGTTGGGCGAGAGCTGAGGAGCCGGCGTCCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CCA 90 bp GCTCCGCGCCTCCGCGGCCACAGAGACTCAGCCAGGTACACCCGCTaGCCAGATTCCGGTCCACTGAGTCTAAGCCGGAAACAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: APRLRGHRDSARYTR*PDSGPLSLSRKQPC
Trigger: GCAGGGCTGTTTCCGGCTTAGACTCAGTGGACCGGAATCTGGCCAGCGGGTGTACCTGGCTGAGTCTCTGTGGCCGCGGAGGCGCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328654.10
ENST00000537956.1
CDS GCA 90 bp GACAACCTCCCGGTCTGGGTACCAGGAGTCGCACGGATGGATTTGTaGCTTTCCGTGGCCCTGACTCGGGAGAGCAGGAGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: DNLPVWVPGVARMDL*LSVALTRESRRLIW
Trigger: CCAGATCAGCCTCCTGCTCTCCCGAGTCAGGGCCACGGAAAGGCACAAATCCATCCGTGCGACTCCTGGTACCCAGACCGGGAGGTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS GCA 90 bp AAAGTGCTGGTGTGCTGGGCACTGGGCATTGGAGTTGGGGATGGCTaGCCCAGCCTCTGTACACGACACCTGGCCTGGTGGATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: KVLVCWALGIGVGDG*PSLCTRHLAWWIQS
Trigger: ACTCTGGATCCACCAGGCCAGGTGTCGTGTACAGAGGCTGGGGCAGCCATCCCCAACTCCAATGCCCAGTGCCCAGCACACCAGCACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627376.1
CDS CCA 90 bp GCATTGGAGTTGGGGATGGCTGCCCCAGCCTCTGTACACGACACCTaGCCTGGTGGATCCAGAGTTAGTCTTGCTGCCCAGCTGCCACTC +
Preference number: 5 (lower is better)
Translates to: ALELGMAAPASVHDT*PGGSRVSLAAQLPL
Trigger: GAGTGGCAGCTGGGCAGCAAGACTAACTCTGGATCCACCAGGCCAGGTGTCGTGTACAGAGGCTGGGGCAGCCATCCCCAACTCCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627376.1
CDS TCA 90 bp CCAGGCGTGGGGGTGGGCACCTGCAATCCTAGCTACTCAGAAGGCTaGGGCAGGAGAATCGCTGGAACCAGAGAGGCAGAAGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PGVGVGTCNPSYSEG*GRRIAGTREAEVAV
Trigger: CACTGCAACTTCTGCCTCTCTGGTTCCAGCGATTCTCCTGCCTCAGCCTTCTGAGTAGCTAGGATTGCAGGTGCCCACCCCCACGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS-3UTR CAA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGTCGCACGGATGGATTaGTGCCTTTCCGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEVARMD*CLSVAL
Trigger: CAGGGCCACGGAAAGGCACAAATCCATCCGTGCGAC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGCTGAGGCAAGGAAATaGCTTGAACCCAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLAEARK*LEPRRW
Trigger: CCACCTCCTGGGTTCAAGCAATTTCCTTGCCTCAGC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGGTCAAGAGTTCCTTTaGGCCTCCAGCCTGATCTCA +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLGQEFL*ASSLIS
Trigger: TGAGATCAGGCTGGAGGCCAAAAGGAACTCTTGACC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAACCAGAATGGGAGGATaGCTTGAGCCCTGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLTRMGG*LEPWSL
Trigger: CAAACTCCAGGGCTCAAGCAATCCTCCCATTCTGGT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAACCATGTTGGCCAGGTaGTTCTCAAACGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLTMLAR*FSNAQP
Trigger: AGGTTGGGCGTTTGAGAACAACCTGGCCAACATGGT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGGCATGATAATCACTaGAACCTTGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLRHDNH*NLGGGG
Trigger: ACCTCCGCCTCCAAGGTTCAAGTGATTATCATGCCT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS TCA 90 bp GGTTCTGGAGGCCAGGAAGTCCATAAGCATGGTGCTGGCATCTGGTaGGGGCCTTCTTGCTATGTCATAACTTGGTGGAAGGCAATACAT +
Preference number: 5 (lower is better)
Translates to: GSGGQEVHKHGAGIW*GPSCYVITWWKAIH
Trigger: ATGTATTGCCTTCCACCAAGTTATGACATAGCAAGAAGGCCCTCACCAGATGCCAGCACCATGCTTATGGACTTCCTGGCCTCCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGTTCCAGGACTGCATCTaGGAGGACGGTGCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMFQDCI*EDGALC
Trigger: GCACAGGGCACCGTCCTCCAAGATGCAGTCCTGGAA...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS CCA 90 bp GATGGCTCTAGTCATCACATCTGCATTCTAAGCAACAGCAAAGAGTaGGGGCTGGGAGGGAACAGCAGGGAAATTCAGAAATGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: DGSSHHICILSNSKE*GLGGNSREIQKWSF
Trigger: GAAACTCCATTTCTGAATTTCCCTGCTGTTCCCTCCCAGCCCCCACTCTTTGCTGTTGCTTAGAATGCAGATGTGATGACTAGAGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534834.1
ENST00000537956.1
ENST00000545101.1
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAACTCTCAAGCTCATCTaGATTGTTCTGGTACCATTC +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLTLKLI*IVLVPF
Trigger: GAATGGTACCAGAACAATCAAGATGAGCTTGAGAGT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGCCAAATATACTATTaGATTCCCACCACCTCACTC +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLSQIYY*IPTTSL
Trigger: GAGTGAGGTGGTGGGAATCAAATAGTATATTTGGCT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGTGCAGTGAGCCGAGATaGTGCAATTCACTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLCSEPR*CNSLQP
Trigger: AGGCTGGAGTGAATTGCACAATCTCGGCTCACTGCA...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAATAACACACTTTTATaGGGTCTTGGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLNNTLL*GLGGGR
Trigger: TCTCCCTCCACCAAGACCCAATAAAAGTGTGTTATT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTATGTGTACACTCCCTATaGAGGAATCACTACCAGATA +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLCVHSL*RNHYQI
Trigger: TATCTGGTAGTGATTCCTCAATAGGGAGTGTACACA...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGGGGTTTCACCATGTaGGCCAGGTTGTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGGFTM*ARLFSN
Trigger: GTTTGAGAACAACCTGGCCAACATGGTGAAACCCCC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAAGGAGCTTTCGTACTTaGAGAATGCTTTACAAGCTG +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLRSFRT*RMLYKL
Trigger: CAGCTTGTAAAGCATTCTCAAAGTACGAAAGCTCCT...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS TCA 90 bp TGGGGTAGAAAGGGCAATTCAGGAGGTGTTTGGACGAGGTTCAGCTaGGAACAGGGGGATAAACAAGAGAGTTTATCCTTCTACTTGCAG +
Preference number: 5 (lower is better)
Translates to: WGRKGNSGGVWTRFS*EQGDKQESLSFYLQ
Trigger: CTGCAAGTAGAAGGATAAACTCTCTTGTTTATCCCCCTGTTCTCAGCTGAACCTCGTCCAAACACCTCCTGAATTGCCCTTTCTACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS GCA 90 bp TCAGCTGAGAACAGGGGGATAAACAAGAGAGTTTATCCTTCTACTTaGAGGAGTCTGAAGGCAATTGGTCTGGGGCTTCCATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: SAENRGINKRVYPST*RSLKAIGLGLPSLA
Trigger: AGCAAGAGATGGAAGCCCCAGACCAATTGCCTTCAGACTCCTGCAAGTAGAAGGATAAACTCTCTTGTTTATCCCCCTGTTCTCAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS CCA 90 bp AAACAAGAGAGTTTATCCTTCTACTTGCAGGAGTCTGAAGGCAATTaGTCTGGGGCTTCCATCTCTTGCTCCACCTTACATGGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: KQESLSFYLQESEGN*SGASISCSTLHGFH
Trigger: GTGGAAGCCATGTAAGGTGGAGCAAGAGATGGAAGCCCCAGACCAATTGCCTTCAGACTCCTGCAAGTAGAAGGATAAACTCTCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATCCCGTTCCCACTCCTaGGCTCTTGGACCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESRSHS*ALGPVY
Trigger: GTACACAGGTCCAAGAGCCAAGGAGTGGGAACGGGA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAGGTGGGAGAATTGCTaGAAGCCAAGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLRWENC*KPRVQG
Trigger: GCCTTGAACTCTTGGCTTCAAGCAATTCTCCCACCT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTGCAGATGGGACTCTaGAGGATGCAGTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVQMGL*RMQFLR
Trigger: CCTCAGGAACTGCATCCTCAAGAGTCCCATCTGCAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAGCTGAGATCATGCCATaGCATTCCAGCCTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEAEIMP*HSSLED
Trigger: GTCCTCCAGGCTGGAATGCAATGGCATGATCTCAGC...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTTTGTAGACAGGGTTTaGTCACGTTGCCCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFFVDRV*SRCPGC
Trigger: ACACCCAGGGCAACGTGACAAAACCCTGTCTACAAA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTAGGCTTTTCAGCAACATaGACATTTGTCTTCTGTATT +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLGFSAT*TFVFCI
Trigger: AATACAGAAGACAAATGTCAATGTTGCTGAAAAGCC...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCACTGGACTTTCCTCTTaGGGAACTCCTATGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFTGLSS*GTPMPS
Trigger: AGAGGGCATAGGAGTTCCCAAAGAGGAAAGTCCAGT...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GAGCTAGTTTGGGCTTTCTTACTGCAGGGCAGCTCAGGGCCATTGGACTGCTTACTCCAACTAGTATTGTaGAGTTGTCTCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: ELVWAFLLQGSSGPLDCLLQLVL*SCLSSF
Trigger: AAATGAAGAGAGACAACTCAACAATACTAGTTGGAG...TAAGCAGTCCAATGGCCCTGAGCTGCCCTGCAGTAAGAAAGCCCAAACTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTCTGATGGTTCCTGTTaGTCAGGGATTCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFSDGSC*SGIQER
Trigger: CCTCTCCTGAATCCCTGACAAACAGGAACCATCAGA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGAGAACATGCAATATTaGTCTTTCTGTGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEENMQY*SFCAWL
Trigger: AAGCCAAGCACAGAAAGACAAATATTGCATGTTCTC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTGAGGCAGAGAACTGCTaGAACCCAGTAGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFEAENC*NPVGGG
Trigger: GCCTCCTCCTACTGGGTTCAAGCAGTTCTCTGCCTC...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS CCA 90 bp GAGGCACAGAGTAGTCACTGTTCCATAGAAATCCATAAATCCTACTaGGTACCCATTACCAGTTCGGTGATTAGGGTTTGGTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: EAQSSHCSIEIHKSY*VPITSSVIRVWFCF
Trigger: AAAGCAGAACCAAACCCTAATCACCGAACTGGTAATGGGTACCCAGTAGGATTTATGGATTTCTATGGAACAGTGACTACTCTGTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCGCATTAAGGTTTGACTaGGCACTGAAGGCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFALRFD*ALKALS
Trigger: TGAAAGAGCCTTCAGTGCCAAGTCAAACCTTAATGC...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTCATCCCAAATATGGTaGGTCTCTCTCCTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFSSQIW*VSLLSD
Trigger: ATCAGAGAGGAGAGAGACCAACCATATTTGGGATGA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCTGATTTCCTTTCTTTaGGCTTTTCACCCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLLISFL*AFHPVV
Trigger: CACTACTGGGTGAAAAGCCAAAAGAAAGGAAATCAG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGACTAGTATTGTTGAGTaGTCTCTCTTCATTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SFPLFPASGNHHQLYLHETSIVE*SLFISV
Trigger: GACAGAAATGAAGAGAGACAACTCAACAATACTAGT...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGGACAATATATCTGTGTaGTTTAAGCCATCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SFPLFPASGNHHQLYLHEDNISV*FKPSSL
Trigger: CAAACTGGATGGCTTAAACAACACAGATATATTGTC...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGAAACCTGTCAATGCCTaGATTTCAAACATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLKPVNA*ISNMEA
Trigger: AGCCTCCATGTTTGAAATCAAGGCATTGACAGGTTT...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TCCTTCCCCCTCTTCCCAGCTTCTGGTAACCACCATCAACTCTATCTTCATGAGCTTGCTTTTTCTGCTTaGGTCAGTTTTGATAATGTG +
Preference number: 5 (lower is better)
Translates to: SFPLFPASGNHHQLYLHELAFSA*VSFDNV
Trigger: CACATTATCAAAACTGACCAAAGCAGAAAAAGCAAG...CTCATGAAGATAGAGTTGATGGTGGTTACCAGAAGCTGGGAAGAGGGGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS CCA 90 bp TCCCTGTACCAGAAGCAAGCATCACACAGAACACATGGTAGAGCCTaGTCAATTCAAGGAACAACAAATATTTCAGACACCGAAAAGACT +
Preference number: 5 (lower is better)
Translates to: SLYQKQASHRTHGRA*SIQGTTNISDTEKT
Trigger: AGTCTTTTCGGTGTCTGAAATATTTGTTGTTCCTTGAATTGACCAGGCTCTACCATGTGTTCTGTGTGATGCTTGCTTCTGGTACAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS CCA 90 bp TTGGATGCAATTACATTAGGTGACATGGAAAAGATGCAGAGGAACTaGGAAGGGATAAATGTTCCTCTACCAACTATTTCCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LDAITLGDMEKMQRN*EGINVPLPTISCGW
Trigger: CCAGCCACAGGAAATAGTTGGTAGAGGAACATTTATCCCTTCCCAGTTCCTCTGCATCTTTTCCATGTCACCTAATGTAATTGCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAATCAGCAATGTCAAAGTaGCCAAGTCTGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: QKFKIGSARQLFLRLDLESAMSK*PSLTLH
Trigger: GTGGAGTGTCAGACTTGGCAACTTTGACATTGCTGA...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTTCTCACGAATGCTCTaGAATCTTTCACCCAAACAG +
Preference number: 5 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFFSRML*NLSPKQ
Trigger: CTGTTTGGGTGAAAGATTCAAGAGCATTCGTGAGAA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGCGTTATAATATCAGATaGAAGACCAGGATCTCATCG +
Preference number: 5 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLRYNIR*KTRISS
Trigger: CGATGAGATCCTGGTCTTCAATCTGATATTATAACG...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp AAAAATAAGCCATGGGGAACTGGCAGAATAAGCTTCCTCCTGCAAGGCAAATTCTTCTGCTGCATTCTGTaGGCTACAGGCAAATTACAA +
Preference number: 5 (lower is better)
Translates to: KNKPWGTGRISFLLQGKFFCCIL*ATGKLQ
Trigger: TTGTAATTTGCCTGTAGCCAACAGAATGCAGCAGAA...GAATTTGCCTTGCAGGAGGAAGCTTATTCTGCCAGTTCCCCATGGCTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGAAGAATCATGGGTTTaGCTCAGATTAAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMEESWV*LRLSLP
Trigger: GGGAAGACTTAATCTGAGCAAAACCCATGATTCTTC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GGCCTGTCATTCTCATGGTCTAAGATCCAGCAAGATCAAAATCAGCCATCTCTGGGTTGTCTCTTTATTTaGTTATTTCCTCGGCAGTAT +
Preference number: 5 (lower is better)
Translates to: GLSFSWSKIQQDQNQPSLGCLFI*LFPRQY
Trigger: ATACTGCCGAGGAAATAACAAAATAAAGAGACAACC...CAGAGATGGCTGATTTTGATCTTGCTGGATCTTAGACCATGAGAATGACAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAACATCCATCTGGGCTTaGCTATATTTCACTGAGGGA +
Preference number: 5 (lower is better)
Translates to: QKFKIGSARQLFLRLDLETSIWA*LYFTEG
Trigger: TCCCTCAGTGAAATATAGCAAAGCCCAGATGGATGT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGATGCCACAGTTAGGATaGTGTCATATACACAGAACA +
Preference number: 5 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMMPQLG*CHIHRT
Trigger: TGTTCTGTGTATATGACACAATCCTAACTGTGGCAT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTCACCAGCAACCTCCTaGATGACTTTTAGACTCTGC +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFSPATS*MTFRLC
Trigger: GCAGAGTCTAAAAGTCATCAAGGAGGTTGCTGGTGA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGGTTTTTGCTATAGAGTaGTTTGAGCTCCCTGTATAT +
Preference number: 5 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMVFAIE*FELPVY
Trigger: ATATACAGGGAGCTCAAACAACTCTATAGCAAAAAC...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTCAGTTCCATCCCAGTaGCTGCAAATGACAGGATTT +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFSVPSQ*LQMTGF
Trigger: AAATCCTGTCATTTGCAGCAACTGGGATGGAACTGA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp TGGTTCAAGAGTGTGAATTCCAGTGACAAGATGGAAGCTGCATCACCTTTTATGAATGACTTTAATTTTTaGTGTGTGACAGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: WFKSVNSSDKMEAASPFMNDFNF*CVTGSH
Trigger: GTGAGACCCTGTCACACACAAAAAATTAAAGTCATT...CATAAAAGGTGATGCAGCTTCCATCTTGTCACTGGAATTCACACTCTTGAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTGTCCTTTTTATGGGTaGGTCCAGTCACTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFCPFYG*VQSLFY
Trigger: GTAGAAGAGTGACTGGACCAACCCATAAAAAGGACA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp CAGAAATTCAAGATAGGCTCAGCTAGGCAGCTTTTTCTAAGGCTAGATCTAGAAATACCTGTTAGACATTaGCATGTCTTCTCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: QKFKIGSARQLFLRLDLEIPVRH*HVFSEK
Trigger: TTTCTCAGAGAAGACATGCAAATGTCTAACAGGTAT...TTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTTTCCTCCACATTCTTTaGGCTACAAGTGACTCACAA +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFFLHIL*ATSDSQ
Trigger: TTGTGAGTCACTTGTAGCCAAAAGAATGTGGAGGAA...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTATCATATACCCCACTTaGTTAACTACATGCTACCAA +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFIIYPT*LTTCYQ
Trigger: TTGGTAGCATGTAGTTAACAAAGTGGGGTATATGAT...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTCCCAATCTGTGGGTaGTCTCTTTATTTTGTTATT +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLPICG*SLYFVI
Trigger: AATAACAAAATAAAGAGACAACCCACAGATTGGGAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS-3UTR CAA 90 bp GCTTTACAAGCTGAAAAGACTGTTTACCATTTCCTCCATGGAATGGTTCATTTTCTGATTGTGGTTAATTaGCATTTCTCTGATAAGTGG +
Preference number: 5 (lower is better)
Translates to: ALQAEKTVYHFLHGMVHFLIVVN*HFSDKW
Trigger: CCACTTATCAGAGAAATGCAAATTAACCACAATCAG...AAAATGAACCATTCCATGGAGGAAATGGTAAACAGTCTTTTCAGCTTGTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328654.10
CDS TCA 72 bp CTGCGGGGGCAGGACCCGCGGGCTGCGGAGAGACCGTaGGGGATGCGTCCGCCCGAAGACAGGTGCGGGACC +
Preference number: 6 (lower is better)
Translates to: LRGQDPRAAERP*GMRPPEDRCGT
Trigger: GGTCCCGCACCTGTCTTCGGGCGGACGCATCCCTCACGGTCTCTCCGCAGCCCGCGGGTCCTGCCCCCGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS GCA 72 bp GGCAGGACCCGCGGGCTGCGGAGAGACCGTGAGGGATaGGTCCGCCCGAAGACAGGTGCGGGACCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: GRTRGLRRDREG*VRPKTGAGPGP
Trigger: GGGCCCTGGTCCCGCACCTGTCTTCGGGCGGACGCATCCCTCACGGTCTCTCCGCAGCCCGCGGGTCCTGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS GCA 72 bp GTTCGCGCGCTGCCTGCGGGGGCAGGACCCGCGGGCTaGGGAGAGACCGTGAGGGATGCGTCCGCCCGAAGA +
Preference number: 6 (lower is better)
Translates to: VRALPAGAGPAG*GETVRDASARR
Trigger: TCTTCGGGCGGACGCATCCCTCACGGTCTCTCCGCAGCCCGCGGGTCCTGCCCCCGCAGGCAGCGCGCGAAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CAA 72 bp GGGCCCCAGGCTCCTGACCGTCCCGGGGCCGAGTCGTaGGCAGGGACGCCGGCTCCTCAGCTCTCGCCCAAC +
Preference number: 6 (lower is better)
Translates to: GPQAPDRPGAES*AGTPAPQLSPN
Trigger: GTTGGGCGAGAGCTGAGGAGCCGGCGTCCCTGCCAACGACTCGGCCCCGGGACGGTCAGGAGCCTGGGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS GCA 72 bp AAACTGGTGGCCATCCCCACGCCCACGTTCGCGCGCTaGCTGCGGGGGCAGGACCCGCGGGCTGCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: KLVAIPTPTFAR*LRGQDPRAAER
Trigger: TCTCTCCGCAGCCCGCGGGTCCTGCCCCCGCAGGCAGCGCGCGAACGTGGGCGTGGGGATGGCCACCAGTTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CCA 72 bp GGCCCCAGGCTCCTGACCGTCCCGGGGCCGAGTCGTTaGCAGGGACGCCGGCTCCTCAGCTCTCGCCCAACA +
Preference number: 6 (lower is better)
Translates to: GPRLLTVPGPSR*QGRRLLSSRPT
Trigger: TGTTGGGCGAGAGCTGAGGAGCCGGCGTCCCTGCCAACGACTCGGCCCCGGGACGGTCAGGAGCCTGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CCA 72 bp TCCGTGGCCCTGACTCGGGAGAGCAGGAGGCTGATCTaGCCCCGTCCACGCCCCGGACCGACGGAAGTGTTT +
Preference number: 6 (lower is better)
Translates to: SVALTRESRRLI*PRPRPGPTEVF
Trigger: AAACACTTCCGTCGGTCCGGGGCGTGGACGGGGCCAGATCAGCCTCCTGCTCTCCCGAGTCAGGGCCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS TCA 72 bp CCGGCTCCTCAGCTCTCGCCCAACACAGACCGCGCGTaGCTAGACAACCTCCCGGTCTGGGTACCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: PAPQLSPNTDRA*LDNLPVWVPGV
Trigger: GACTCCTGGTACCCAGACCGGGAGGTTGTCTAGTCACGCGCGGTCTGTGTTGGGCGAGAGCTGAGGAGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS GCA 72 bp CCGGTCTGGGTACCAGGAGTCGCACGGATGGATTTGTaGCTTTCCGTGGCCCTGACTCGGGAGAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PVWVPGVARMDL*LSVALTRESRR
Trigger: CCTCCTGCTCTCCCGAGTCAGGGCCACGGAAAGGCACAAATCCATCCGTGCGACTCCTGGTACCCAGACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CAA 72 bp CTCCCGGTCTGGGTACCAGGAGTCGCACGGATGGATTaGTGCCTTTCCGTGGCCCTGACTCGGGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LPVWVPGVARMD*CLSVALTRESR
Trigger: CCTGCTCTCCCGAGTCAGGGCCACGGAAAGGCACAAATCCATCCGTGCGACTCCTGGTACCCAGACCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CCA 72 bp CTCCGCGGCCACAGAGACTCAGCCAGGTACACCCGCTaGCCAGATTCCGGTCCACTGAGTCTAAGCCGGAAA +
Preference number: 6 (lower is better)
Translates to: LRGHRDSARYTR*PDSGPLSLSRK
Trigger: TTTCCGGCTTAGACTCAGTGGACCGGAATCTGGCCAGCGGGTGTACCTGGCTGAGTCTCTGTGGCCGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328654.10
ENST00000537956.1
CDS CCA 72 bp CCCCGTCCACGCCCCGGACCGACGGAAGTGTTTAGCTaGTCAAGTCTCTGGTCTGCCCAGGATAATCCGAGC +
Preference number: 6 (lower is better)
Translates to: PRPRPGPTEVFS*SSLWSAQDNPS
Trigger: GCTCGGATTATCCTGGGCAGACCAGAGACTTGACCAGCTAAACACTTCCGTCGGTCCGGGGCGTGGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CAA 90 bp CTAGACAACCTCCCGGTCTGGGTACCAGGAGTCGCACGGATGGATTaGTGCCTTTCCGTGGCCCTGACTCGGGAGAGCAGGAGGCTGATC +
Preference number: 6 (lower is better)
Translates to: LDNLPVWVPGVARMD*CLSVALTRESRRLI
Trigger: GATCAGCCTCCTGCTCTCCCGAGTCAGGGCCACGGAAAGGCACAAATCCATCCGTGCGACTCCTGGTACCCAGACCGGGAGGTTGTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CCA 72 bp CCCGGACCGACGGAAGTGTTTAGCTGGTCAAGTCTCTaGTCTGCCCAGGATAATCCGAGCCGCTTAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PGPTEVFSWSSL*SAQDNPSRLAP
Trigger: CGGAGCTAAGCGGCTCGGATTATCCTGGGCAGACCAGAGACTTGACCAGCTAAACACTTCCGTCGGTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328654.10
ENST00000537956.1
ENST00000540238.5
ENST00000544181.5
ENST00000545101.1
CDS CAA 72 bp TACACGACACCTGGCCTGGTGGATCCAGAGTTAGTCTaGCTGCCCAGCTGCCACTCCAGCCACTCCCTAGAC +
Preference number: 6 (lower is better)
Translates to: YTTPGLVDPELV*LPSCHSSHSLD
Trigger: GTCTAGGGAGTGGCTGGAGTGGCAGCTGGGCAGCAAGACTAACTCTGGATCCACCAGGCCAGGTGTCGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627376.1
CDS CAA 90 bp CAGCCTCTGTACACGACACCTGGCCTGGTGGATCCAGAGTTAGTCTaGCTGCCCAGCTGCCACTCCAGCCACTCCCTAGACACAATTTTA +
Preference number: 6 (lower is better)
Translates to: QPLYTTPGLVDPELV*LPSCHSSHSLDTIL
Trigger: TAAAATTGTGTCTAGGGAGTGGCTGGAGTGGCAGCTGGGCAGCAAGACTAACTCTGGATCCACCAGGCCAGGTGTCGTGTACAGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627376.1
CDS TCA 72 bp GGCCAGGAAGTCCATAAGCATGGTGCTGGCATCTGGTaGGGGCCTTCTTGCTATGTCATAACTTGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: GQEVHKHGAGIW*GPSCYVITWWK
Trigger: CTTCCACCAAGTTATGACATAGCAAGAAGGCCCTCACCAGATGCCAGCACCATGCTTATGGACTTCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS GCA 72 bp GGCCTGGTGGATCCAGAGTTAGTCTTGCTGCCCAGCTaGCACTCCAGCCACTCCCTAGACACAATTTTAAAT +
Preference number: 6 (lower is better)
Translates to: GLVDPELVLLPS*HSSHSLDTILN
Trigger: ATTTAAAATTGTGTCTAGGGAGTGGCTGGAGTGGCAGCTGGGCAGCAAGACTAACTCTGGATCCACCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627376.1
CDS CAA 72 bp GAACAGGGGGATAAACAAGAGAGTTTATCCTTCTACTaGCAGGAGTCTGAAGGCAATTGGTCTGGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: EQGDKQESLSFY*QESEGNWSGAS
Trigger: GGAAGCCCCAGACCAATTGCCTTCAGACTCCTGCAAGTAGAAGGATAAACTCTCTTGTTTATCCCCCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS TCA 72 bp AAGGGCAATTCAGGAGGTGTTTGGACGAGGTTCAGCTaGGAACAGGGGGATAAACAAGAGAGTTTATCCTTC +
Preference number: 6 (lower is better)
Translates to: KGNSGGVWTRFS*EQGDKQESLSF
Trigger: GAAGGATAAACTCTCTTGTTTATCCCCCTGTTCTCAGCTGAACCTCGTCCAAACACCTCCTGAATTGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS TCA 72 bp GGAAATTCAGAAATGGAGTTTCTGTATATGCCCAACTaGAAAACTGGCAAATCCAGCACGAAGCTGTCCGGA +
Preference number: 6 (lower is better)
Translates to: GNSEMEFLYMPN*KTGKSSTKLSG
Trigger: TCCGGACAGCTTCGTGCTGGATTTGCCAGTTTTTCAGTTGGGCATATACAGAAACTCCATTTCTGAATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545101.1
CDS CCA 72 bp CAGAAGCAAGCATCACACAGAACACATGGTAGAGCCTaGTCAATTCAAGGAACAACAAATATTTCAGACACC +
Preference number: 6 (lower is better)
Translates to: QKQASHRTHGRA*SIQGTTNISDT
Trigger: GGTGTCTGAAATATTTGTTGTTCCTTGAATTGACCAGGCTCTACCATGTGTTCTGTGTGATGCTTGCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS CAA 72 bp AAATCAATCAAGGAGCTTCTATTTGCCGGTACTCTCTaGGGTCCTGAAGATTTCAGGATGAATAAAATCCAG +
Preference number: 6 (lower is better)
Translates to: KSIKELLFAGTL*GPEDFRMNKIQ
Trigger: CTGGATTTTATTCATCCTGAAATCTTCAGGACCCAAGAGAGTACCGGCAAATAGAAGCTCCTTGATTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534834.1
CDS CAA 90 bp TCCTGTCTATATTATCCGAAGTCTCCTGAACATCAGTTTCTCACATaGCATCATTCTGATTTCTCATTTATGAGTCTTCCGATGTATACG +
Preference number: 6 (lower is better)
Translates to: SCLYYPKSPEHQFLT*HHSDFSFMSLPMYT
Trigger: CGTATACATCGGAAGACTCATAAATGAGAAATCAGAATGATGCAATGTGAGAAACTGATGTTCAGGAGACTTCGGATAATATAGACAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328654.10
ENST00000534834.1
CDS CCA 72 bp GGGATAAATGTTCCTCTACCAACTATTTCCTGTGGCTaGTTCAGCATTTACTTTGTGAGAGAATTAAAAATC +
Preference number: 6 (lower is better)
Translates to: GINVPLPTISCG*FSIYFVRELKI
Trigger: GATTTTTAATTCTCTCACAAAGTAAATGCTGAACCAGCCACAGGAAATAGTTGGTAGAGGAACATTTATCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534834.1