RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF248 (Homo sapiens)

Ensembl gene IDs: ENSG00000198105

Ensembl transcript IDs: ENST00000357328.8, ENST00000374648.7, ENST00000395867.8, ENST00000395873.7, ENST00000485560.5, ENST00000494133.1, ENST00000611278.4

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTaGCTGCCCCTTGCTCATGCTGGCAGCCTAATTCTTCCTGAAAGC +
Preference number: 1 (lower is better)
Translates to: SSQSSQWAVTCPLLC*LPLAHAGSLILPES
Trigger: GCTTTCAGGAAGAATTAGGCTGCCAGCATGAGCAAGGGGCAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR GCA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTaGTGCCTGCCCCTTGCTCATGCTGGCAGCCTAATTCTTCCTGAA +
Preference number: 1 (lower is better)
Translates to: VSSQSSQWAVTCPLL*CLPLAHAGSLILPE
Trigger: TTCAGGAAGAATTAGGCTGCCAGCATGAGCAAGGGGCAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR TCA 90 bp TTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGCTaGTACAAGTCTCTGGGTGTTTCACTGTCCCTTGTTTCTGGCCCA +
Preference number: 1 (lower is better)
Translates to: FPPCPSRLRMAMASC*YKSLGVSLSLVSGP
Trigger: TGGGCCAGAAACAAGGGACAGTGAAACACCCAGAGACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 90 bp AACAGGTATAGAGAGCAGAGTAGCTCGGCAACGTCACCTCTGAGCTaGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTGCCCT +
Preference number: 1 (lower is better)
Translates to: NRYREQSSSATSPLS*LFPPCALLSSGYCP
Trigger: AGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCGAGCTACTCTGCTCTCTATACCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR TCA 90 bp GACATGCTCTTTCCTGGCCTTTTCCACTCTGCTCTGAGGCTCTGCTaGAAGGTCTCAGATCAGAAGTGTGACCTTCCACGTGGGTTCTTA +
Preference number: 1 (lower is better)
Translates to: DMLFPGLFHSALRLC*KVSDQKCDLPRGFL
Trigger: TAAGAACCCACGTGGAAGGTCACACTTCTGATCTGAGACCTTTCAGCAGAGCCTCAGAGCAGAGTGGAAAAGGCCAGGAAAGAGCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR TCA 90 bp CCACTCTGCTCTGAGGCTCTGCTGAAAGGTCTCAGATCAGAAGTGTaGCCTTCCACGTGGGTTCTTAGGGACTACTCCTTATTACCTCAA +
Preference number: 1 (lower is better)
Translates to: PLCSEALLKGLRSEV*PSTWVLRDYSLLPQ
Trigger: TTGAGGTAATAAGGAGTAGTCCCTAAGAACCCACGTGGAAGGTCACACTTCTGATCTGAGACCTTTCAGCAGAGCCTCAGAGCAGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR CCA 90 bp CTTCAAGGCTCAGAATGGCAATGGCTTCCTGCTGATACAAGTCTCTaGGTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATC +
Preference number: 1 (lower is better)
Translates to: LQGSEWQWLPADTSL*VFHCPLFLAHTTVI
Trigger: GATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACACCCAGAGACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 90 bp CAATTTGGCACCACAGTTCTGGTAGTAATGATGTCTCTTACAAGGTaGCCCCTCCTTCATGACAGCAGTTCTTACTGGGCTCTGGTAACA +
Preference number: 1 (lower is better)
Translates to: QFGTTVLVVMMSLTR*PLLHDSSSYWALVT
Trigger: TGTTACCAGAGCCCAGTAAGAACTGCTGTCATGAAGGAGGGGCCACCTTGTAAGAGACATCATTACTACCAGAACTGTGGTGCCAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 90 bp GCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTaGCACCACAGTTCTGGTAGTAATGATGTCTCTTACAAGGTGGCC +
Preference number: 1 (lower is better)
Translates to: ADVSGWFLQRETPAI*HHSSGSNDVSYKVA
Trigger: GGCCACCTTGTAAGAGACATCATTACTACCAGAACTGTGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR GCA 90 bp CTGAGCTGGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTaGCCTTCAGAGATAAAAACGATAAGCCAATACCATGTTACAGAC +
Preference number: 1 (lower is better)
Translates to: LSWLFPPCALLSSGY*PSEIKTISQYHVTD
Trigger: GTCTGTAACATGGTATTGGCTTATCGTTTTTATCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR TCA 90 bp ACTTTATTCCAAGGATGCTGGCTTAGAAACTTCAATCATACTGCCTaGCCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACAC +
Preference number: 1 (lower is better)
Translates to: TLFQGCWLRNFNHTA*PWSSEETSRILETH
Trigger: GTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGGCAGTATGATTGAAGTTTCTAAGCCAGCATCCTTGGAATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR TCA 90 bp ACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCCTCACAGCCTCACAGTGGGCAGTaGCGTGTCCTCTCCTGTGCT +
Preference number: 2 (lower is better)
Translates to: TGTSSPSRRCLPQTVSSQPHSGQ*RVLSCA
Trigger: AGCACAGGAGAGGACACGTCACTGCCCACTGTGAGG...CTGTGAGGACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR GCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCCTGCCCCTTGCTCATaGTGGCAGCCTAATTCTTCC +
Preference number: 2 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCPAPCS*WQPNSS
Trigger: GGAAGAATTAGGCTGCCAGCATGAGCAAGGGGCAGG...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR GCA 90 bp GCCTTGAACTCCTGGGCTGAAGCTCAAGTAATCCTCCAGTCTCGGCCTCTTAAGCTCTCCTGTGCTGCCTaGCCCTTGCTCATGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ALNSWAEAQVILQSRPLKLSCAA*PLLMLA
Trigger: TGCCAGCATGAGCAAGGGGCAGGCAGCACAGGAGAG...CTTAAGAGGCCGAGACTGGAGGATTACTTGAGCTTCAGCCCAGGAGTTCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR TCA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACCGGCAACGTCACCTCTaGGCTGGCTTTTCCCACCTT +
Preference number: 2 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDRQRHL*AGFSHL
Trigger: AAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCG...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCAGCCTAATTCTTCCTaGAAGCCCATCCACTGGACA +
Preference number: 2 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCQPNSS*KPIHWT
Trigger: TGTCCAGTGGATGGGCTTTCAGGAAGAATTAGGCTG...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR GCA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGTGGCCTTTTCCACTCTaGTCTGAGGCTCTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLWPFPL*SEALLK
Trigger: TTTCAGCAGAGCCTCAGAGCAGAGTGGAAAAGGCCA...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR GCA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGAGGCAGTTCCAGACATaGTCTTTCCTGGCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLRQFQT*SFLAFS
Trigger: GGAAAAGGCCAGGAAAGAGCATGTCTGGAACTGCCT...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR CCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCTGGACAGTCTGCCATaGTTTCTGCATGTGCTGACA +
Preference number: 2 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCLDSLP*FLHVLT
Trigger: TGTCAGCACATGCAGAAACCATGGCAGACTGTCCAG...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR TCA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCCTGGGTTTCTGCATGTGCTaGCATCACCAAGTGTTATTT +
Preference number: 2 (lower is better)
Translates to: VSSQSSQWAVTCPLLCCLGFCMC*HHQVLF
Trigger: AAATAACACTTGGTGATGTCAGCACATGCAGAAACC...CAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR GCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTAAACTTCAATCATACTaGCTGACCCTGGAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCKLQSY*LTLELR
Trigger: TCTGAGCTCCAGGGTCAGGCAGTATGATTGAAGTTT...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR GCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGTCCCAAACATCTCATTaGTCCCAAGTTCACCCCAAC +
Preference number: 2 (lower is better)
Translates to: SVPTWALQQMYLVGFSKESQTSH*SQVHPN
Trigger: GTTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGA...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAACATACCGCCACTTTTTaGGGAGTGCAGTGTTACTGC +
Preference number: 2 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKHTATF*GVQCYC
Trigger: GCAGTAACACTGCACTCCTCAAAAAGTGGCGGTATG...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGTTCCTCTGTGTCAGCTaGAATGCCTTCAGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLFLCVS*NAFSSK
Trigger: CTTAGAGCTGAAGGCATTCCAGCTGACACAGAGGAA...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGACCATGTTACAGACATaGAAAAGCCCAGCAGAGTCT +
Preference number: 2 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLTMLQT*KSPAES
Trigger: AGACTCTGCTGGGCTTTTTCATGTCTGTAACATGGT...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACGGGAAGAGACAGATGTaGAGTGCACACTATTATACA +
Preference number: 2 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDGKRQM*SAHYYT
Trigger: TGTATAATAGTGTGCACTGCACATCTGTCTCTTCCC...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGGCTTTTCCCACCTTGTaGACTGTTATCTTCAGGCTA +
Preference number: 2 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLAFPTL*TVIFRL
Trigger: TAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGC...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGTCTTTCTTGAAGACGTaGTTCAGCTGTAAATGGCCA +
Preference number: 2 (lower is better)
Translates to: SVPTWALQQMYLVGFSKESFLKT*FSCKWP
Trigger: TGGCCATTTACAGCTGAACCACGTCTTCAAGAAAGA...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGTCTCTTCTCATGTCATaGCAATGTTGTATCAAGGAG +
Preference number: 2 (lower is better)
Translates to: SVPTWALQQMYLVGFSKESLLMS*QCCIKE
Trigger: CTCCTTGATACAACATTGTCATGACATGAGAAGAGA...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCATCCCAAACATCTCATTaGTCCCAAGTTCACCCCAAC +
Preference number: 2 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPSQTSH*SQVHPN
Trigger: GTTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGA...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CAA 90 bp CAATGGCTTCCTGCTGATACAAGTCTCTGGGTGTTTCACTGTCCCTaGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAAAATAT +
Preference number: 2 (lower is better)
Translates to: QWLPADTSLWVFHCP*FLAHTTVISLPLKY
Trigger: ATATTTTAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACACCCAGAGACTTGTATCAGCAGGAAGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp GCTGGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTGCCCTTCAGAGAGGAAGTGATGAGTGCTaGGTATTTATTACCTTTGTT +
Preference number: 2 (lower is better)
Translates to: AGFSHLVHCYLQATALQRGSDEC*VFITFV
Trigger: AACAAAGGTAATAAATACTCAGCACTCATCACTTCC...TCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCAGCTTTTCCCACCTTGTaGACTGTTATCTTCAGGCTA +
Preference number: 2 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPAFPTL*TVIFRL
Trigger: TAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGC...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp GCCTTGAACTCCTGGGCTGAAGCTCAAGTAATCCTCCAGTCTCGGCCTCTTAAGTTATTCCAAGGATGCTaGCTTAGAAACTTCAATCAT +
Preference number: 2 (lower is better)
Translates to: ALNSWAEAQVILQSRPLKLFQGC*LRNFNH
Trigger: ATGATTGAAGTTTCTAAGCCAGCATCCTTGGAATAA...CTTAAGAGGCCGAGACTGGAGGATTACTTGAGCTTCAGCCCAGGAGTTCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR GCA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAATATTCATGCATATATaGCAGGAAACAGTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKIFMHI*QETVRG
Trigger: TCCTCTGACTGTTTCCTGGCATATATGCATGAATAT...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAACTAAAAACATATACTaGCCAACCTACAAAGAGACT +
Preference number: 2 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKTKNIY*PTYKET
Trigger: AGTCTCTTTGTAGGTTGGCCAGTATATGTTTTTAGT...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CAA 90 bp GACATGAAAAAGCCCAGCAGAGTCTCTTCTCATGTCATGACAATGTaGTATCAAGGAGATCTTTCCCAGAAGTACTACACAATACTTCCC +
Preference number: 2 (lower is better)
Translates to: DMKKPSRVSSHVMTM*YQGDLSQKYYTILP
Trigger: GGGAAGTATTGTGTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACTCTGCTGGGCTTTTTCATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAAGCTTTTCCCACCTTGTaGACTGTTATCTTCAGGCTA +
Preference number: 2 (lower is better)
Translates to: HQKEPWLIQTAIPILTCEAFPTL*TVIFRL
Trigger: TAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGC...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAATTTTGGCTTCTTTCTTaGAGACGTGGTTCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: HQKEPWLIQTAIPILTCEFWLLS*RRGSAV
Trigger: TACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAA...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGTTTTGGCTTCTTTCTTaGAGACGTGGTTCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: IMSASHMLKERHTCVVPKFWLLS*RRGSAV
Trigger: TACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAA...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGGAAGAGACAGATGTaGAGTGCACACTATTATACA +
Preference number: 2 (lower is better)
Translates to: IMSASHMLKERHTCVVPKGKRQM*SAHYYT
Trigger: TGTATAATAGTGTGCACTGCACATCTGTCTCTTCCC...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACAGTGTTACATAGACCGTaGCCAAACAGATACACAATG +
Preference number: 2 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTVLHRP*PNRYTM
Trigger: CATTGTGTATCTGTTTGGGCACGGTCTATGTAACAC...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp TTAGCTTTGACTAATCTGGACTTACCACCTAAGTCATCTGGGAGAAGGATGCACAATAGAAGGGGTATGTaGTTTGTATTGCCAAATACG +
Preference number: 2 (lower is better)
Translates to: LALTNLDLPPKSSGRRMHNRRGM*FVLPNT
Trigger: CGTATTTGGCAATACAAACCACATACCCCTTCTATT...GTGCATCCTTCTCCCAGATGACTTAGGTGGTAAGTCCAGATTAGTCAAAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp CATGAAAAAGCCCAGCAGAGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGATATTCATGCATATATaGCAGGAAACAGTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: HEKAQQSLFSCHDNVVSRIFMHI*QETVRG
Trigger: TCCTCTGACTGTTTCCTGGCATATATGCATGAATAT...CCTTGATACAACATTGTCATGACATGAGAAGAGACTCTGCTGGGCTTTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR GCA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACATTATCTTCAGGCTACTaGCCTTCAGAGATAAAAACG +
Preference number: 2 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTLSSGY*PSEIKT
Trigger: CGTTTTTATCTCTGAAGGGCAGTAGCCTGAAGATAA...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACTCTTTCTTGAAGACGTaGTTCAGCTGTAAATGGCCA +
Preference number: 2 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYSFLKT*FSCKWP
Trigger: TGGCCATTTACAGCTGAACCACGTCTTCAAGAAAGA...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACAAATAGAAGGGGTATGTaGTTTGTATTGCCAAATACG +
Preference number: 2 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTNRRGM*FVLPNT
Trigger: CGTATTTGGCAATACAAACCACATACCCCTTCTATT...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR TCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACGGAAGTGATGAGTGCTaGGTATTTATTACCTTTGTT +
Preference number: 2 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYGSDEC*VFITFV
Trigger: AACAAAGGTAATAAATACTCAGCACTCATCACTTCC...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACAATAGAAGGGGTATGTaGTTTGTATTGCCAAATACG +
Preference number: 2 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYNRRGM*FVLPNT
Trigger: CGTATTTGGCAATACAAACCACATACCCCTTCTATT...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CAA 90 bp AAATCAAGGATATCAAAAGGGCCTTTCATTACATACCGCCACTTTTaGAGGAGTGCAGTGTTACTGCTTGTTAACCTTTGCATAATTTAT +
Preference number: 2 (lower is better)
Translates to: KSRISKGPFITYRHF*RSAVLLLVNLCIIY
Trigger: ATAAATTATGCAAAGGTTAACAAGCAGTAACACTGCACTCCTCAAAAAGTGGCGGTATGTAATGAAAGGCCCTTTTGATATCCTTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACACTAAAAACATATACTaGCCAACCTACAAAGAGACT +
Preference number: 2 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYTKNIY*PTYKET
Trigger: AGTCTCTTTGTAGGTTGGCCAGTATATGTTTTTAGT...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR TCA 72 bp CCTGCCCCTTGCTCATGCTGGCAGCCTAATTCTTCCTaGAAGCCCATCCACTGGACAGTCTGCCATGGTTTC +
Preference number: 3 (lower is better)
Translates to: PAPCSCWQPNSS*KPIHWTVCHGF
Trigger: GAAACCATGGCAGACTGTCCAGTGGATGGGCTTTCAGGAAGAATTAGGCTGCCAGCATGAGCAAGGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR CCA 72 bp AGAGAGCAGAGTAGCTCGGCAACGTCACCTCTGAGCTaGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGC +
Preference number: 3 (lower is better)
Translates to: REQSSSATSPLS*LFPPCALLSSG
Trigger: GCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCGAGCTACTCTGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR GCA 72 bp GGCAACGTCACCTCTGAGCTGGCTTTTCCCACCTTGTaGACTGTTATCTTCAGGCTACTGCCCTTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: GNVTSELAFPTL*TVIFRLLPFRD
Trigger: ATCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 72 bp TGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTaGTTTCTCCAAAGAGAGACACCAGCAATTTGGCAC +
Preference number: 3 (lower is better)
Translates to: CAHLGSPADVSG*FLQRETPAIWH
Trigger: GTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACATACCGCCACTTTTaGAGGAGTGCAGTGTTACTG +
Preference number: 3 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDTYRHF*RSAVLL
Trigger: CAGTAACACTGCACTCCTCAAAAAGTGGCGGTATGT...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACTTCCCAAACATCTCATaGCTCCCAAGTTCACCCCAA +
Preference number: 3 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDFPNIS*LPSSPQ
Trigger: TTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGAA...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR TCA 72 bp GGTATAGAGAGCAGAGTAGCTCGGCAACGTCACCTCTaGGCTGGCTTTTCCCACCTTGTGCACTGTTATCTT +
Preference number: 3 (lower is better)
Translates to: GIESRVARQRHL*AGFSHLVHCYL
Trigger: AAGATAACAGTGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCGAGCTACTCTGCTCTCTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 72 bp GTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATaGCTTCCTGCTGATACAAGTCTCTGGGTGTTTCAC +
Preference number: 3 (lower is better)
Translates to: VSLLALQGSEWQ*LPADTSLWVFH
Trigger: GTGAAACACCCAGAGACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 72 bp AACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATaGCAATGGCTTCCTGCTGATACAAGTCTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: NTVSLLALQGSE*QWLPADTSLWV
Trigger: CACCCAGAGACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 72 bp TCTCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTaGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTG +
Preference number: 3 (lower is better)
Translates to: SLCPPGLSSRCI*LVSPKRDTSNL
Trigger: CAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CCA 72 bp CCTGACCCTGGAGCTCAGAAGAAACATCAAGAATCCTaGAAACACACGGGCCAAGTTTCCTGTGAAGGCACA +
Preference number: 3 (lower is better)
Translates to: PDPGAQKKHQES*KHTGQVSCEGT
Trigger: TGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR CAA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGACATACCGCCACTTTTaGAGGAGTGCAGTGTTACTG +
Preference number: 3 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLTYRHF*RSAVLL
Trigger: CAGTAACACTGCACTCCTCAAAAAGTGGCGGTATGT...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR TCA 72 bp TGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGCTaGTACAAGTCTCTGGGTGTTTCACTGTCCCTTGTT +
Preference number: 3 (lower is better)
Translates to: CPSRLRMAMASC*YKSLGVSLSLV
Trigger: AACAAGGGACAGTGAAACACCCAGAGACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR TCA 72 bp TCTGAGGCTCTGCTGAAAGGTCTCAGATCAGAAGTGTaGCCTTCCACGTGGGTTCTTAGGGACTACTCCTTA +
Preference number: 3 (lower is better)
Translates to: SEALLKGLRSEV*PSTWVLRDYSL
Trigger: TAAGGAGTAGTCCCTAAGAACCCACGTGGAAGGTCACACTTCTGATCTGAGACCTTTCAGCAGAGCCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR-3UTR CAA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCAGTGTTTCACTGTCCCTaGTTTCTGGCCCACACCACT +
Preference number: 3 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPVFHCP*FLAHTT
Trigger: AGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACCTCACGGAAATATTTTaGGCTTCTTTCTTGAAGACG +
Preference number: 3 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDLTEIF*ASFLKT
Trigger: CGTCTTCAAGAAAGAAGCCAAAAATATTTCCGTGAG...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTATTCCCAAACATCTCATaGCTCCCAAGTTCACCCCAA +
Preference number: 3 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLFPNIS*LPSSPQ
Trigger: TTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGAA...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCACTGGCTTTTCCCACCTaGTGCACTGTTATCTTCAGG +
Preference number: 3 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPLAFPT*CTVIFR
Trigger: CCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAG...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGCATGTCATGACAATGTaGTATCAAGGAGATCTTTCC +
Preference number: 3 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLHVMTM*YQGDLS
Trigger: GGAAAGATCTCCTTGATACAACATTGTCATGACATG...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTAGTGTTTCACTGTCCCTaGTTTCTGGCCCACACCACT +
Preference number: 3 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVVFHCP*FLAHTT
Trigger: AGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR TCA 72 bp TATTTAACTGTACAGGAGTGCCAAGAATGTCTTCAGTaGACAGGCAGTTCCAGACATGCTCTTTCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: YLTVQECQECLQ*TGSSRHALSWP
Trigger: AGGCCAGGAAAGAGCATGTCTGGAACTGCCTGTTCACTGAAGACATTCTTGGCACTCCTGTACAGTTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR CCA 72 bp TCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTaGCACCACAGTTCTGGTAGTAATGATGTCTCTTAC +
Preference number: 3 (lower is better)
Translates to: SGWFLQRETPAI*HHSSGSNDVSY
Trigger: GTAAGAGACATCATTACTACCAGAACTGTGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCAATGTGCTGTAAATATTaGACAGCAGGTTCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPMCCKY*TAGSLR
Trigger: TCTCAGAGAACCTGCTGTCAAATATTTACAGCACAT...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp TTAGCTTTGACTAATCTGGACTTACCACCTAAGTCATCTGGGAGAAGGATGCACTTTTTGGCTTCTTTCTaGAAGACGTGGTTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: LALTNLDLPPKSSGRRMHFLASF*KTWFSC
Trigger: ACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAAA...GTGCATCCTTCTCCCAGATGACTTAGGTGGTAAGTCCAGATTAGTCAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCACTCACGGAAATATTTTaGGCTTCTTTCTTGAAGACG +
Preference number: 3 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPLTEIF*ASFLKT
Trigger: CGTCTTCAAGAAAGAAGCCAAAAATATTTCCGTGAG...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAATTCCCAAACATCTCATaGCTCCCAAGTTCACCCCAA +
Preference number: 3 (lower is better)
Translates to: HQKEPWLIQTAIPILTCEFPNIS*LPSSPQ
Trigger: TTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGAA...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR GCA 72 bp CTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTaGCCTTCAGAGATAAAAACGATAAGCCAATACCAT +
Preference number: 3 (lower is better)
Translates to: LFPPCALLSSGY*PSEIKTISQYH
Trigger: ATGGTATTGGCTTATCGTTTTTATCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp TTAGCTTTGACTAATCTGGACTTACCACCTAAGTCATCTGGGAGAAGGATGCACATGTGCTGTAAATATTaGACAGCAGGTTCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: LALTNLDLPPKSSGRRMHMCCKY*TAGSLR
Trigger: TCTCAGAGAACCTGCTGTCAAATATTTACAGCACAT...GTGCATCCTTCTCCCAGATGACTTAGGTGGTAAGTCCAGATTAGTCAAAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp CATGAAAAAGCCCAGCAGAGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGTTTTTGGCTTCTTTCTaGAAGACGTGGTTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: HEKAQQSLFSCHDNVVSRFLASF*KTWFSC
Trigger: ACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAAA...CCTTGATACAACATTGTCATGACATGAGAAGAGACTCTGCTGGGCTTTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAAATGTGCTGTAAATATTaGACAGCAGGTTCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: HQKEPWLIQTAIPILTCEMCCKY*TAGSLR
Trigger: TCTCAGAGAACCTGCTGTCAAATATTTACAGCACAT...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR GCA 72 bp GGGACAACTGGCTATTTATTTGGAAGAATACAGAGCTaGTTACCTTACACCACATACAATAAGAAACACCAC +
Preference number: 3 (lower is better)
Translates to: GTTGYLFGRIQS*LPYTTYNKKHH
Trigger: GTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTATTCTTCCAAATAAATAGCCAGTTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR-3UTR CAA 90 bp AGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTCACGGAAATATTTTaGGCTTCTTTCTTGAAGACG +
Preference number: 3 (lower is better)
Translates to: SLFSCHDNVVSRRSFPEVLTEIF*ASFLKT
Trigger: CGTCTTCAAGAAAGAAGCCAAAAATATTTCCGTGAG...TACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTGGCCCTTGGGGCCGGTaGAGGAGCCGTCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCGPWGR*RSRLPR
Trigger: CCGAGGGAGACGGCTCCTGCACCGGCCCCAAGGGCC...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCCTGAGCCAGCAGGGGCCCTaGTGGTCAGCTAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSSQSSQWAVTCPLLCCLSQQGP*WSARPA
Trigger: GGCTGGCCTAGCTGACCACCAGGGCCCCTGCTGGCT...CAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACGGCCCTTGGGGCCGGTaGAGGAGCCGTCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDGPWGR*RSRLPR
Trigger: CCGAGGGAGACGGCTCCTGCACCGGCCCCAAGGGCC...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGGGCCCTTGGGGCCGGTaGAGGAGCCGTCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SVPTWALQQMYLVGFSKEGPWGR*RSRLPR
Trigger: CCGAGGGAGACGGCTCCTGCACCGGCCCCAAGGGCC...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCAGCCCCTTCGCTCCTaGACTCCACGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLQPLRS*TPRAER
Trigger: CCTCTCTGCCCGTGGAGTGCAGGAGCGAAGGGGCTG...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp AGGAAGGGAGCAGGCTTATGGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGACCTCACAGTGGGCAGTaGCGTGTCCTCTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RKGAGLWRSTGTSSPSRRPHSGQ*RVLSCA
Trigger: AGCACAGGAGAGGACACGTCACTGCCCACTGTGAGG...TCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCCATAAGCCTGCTCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGAGGGTCTGGCTCTGTTaGCTGGGCTGTACCACAGTG +
Preference number: 4 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLRVWLC*LGCTTV
Trigger: CACTGTGGTACAGCCCAGGCAACAGAGCCAGACCCT...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGAGCCAGCAGGGGCCCTaGTGGTCAGCTAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLSQQGP*WSARPA
Trigger: GGCTGGCCTAGCTGACCACCAGGGCCCCTGCTGGCT...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCCTGTCACAGTCCTCACAGTaGGCAGTGACGTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VSSQSSQWAVTCPLLCCLSQSSQ*AVTCPL
Trigger: GAGAGGACACGTCACTGCCCACTGTGAGGACTGTGA...CAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCCTGGCTCTGAGGCTCTGCTaGAAGGTCTCAGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSSQSSQWAVTCPLLCCLALRLC*KVSDQK
Trigger: CTTCTGATCTGAGACCTTTCAGCAGAGCCTCAGAGC...CAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp GCTGGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTGCCCTTCAGAGACAGCCCCTTCGCTCCTaGACTCCACGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AGFSHLVHCYLQATALQRQPLRS*TPRAER
Trigger: CCTCTCTGCCCGTGGAGTGCAGGAGCGAAGGGGCTG...TCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACCAGCTCATCTGGATGTaGCCGGTGTTCGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDQLIWM*PVFAEG
Trigger: CCCCTCCGCGAACACCGGGCACATCCAGATGAGCTG...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CCA 90 bp CATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGCACATCAGTTGGGCAGAGAGGCCCTTaGGGCCGGTGCAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: HQESWKHTGQVSCEGTSVGQRGP*GRCRSR
Trigger: ACGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCC...AACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCCTGCTTGAACTCCTGGGCTaGAGCTCAAGTAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSSQSSQWAVTCPLLCCLLELLG*SSSNPP
Trigger: TGGAGGATTACTTGAGCTTCAGCCCAGGAGTTCAAG...CAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACCAGCCCCTTCGCTCCTaGACTCCACGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNQPLRS*TPRAER
Trigger: CCTCTCTGCCCGTGGAGTGCAGGAGCGAAGGGGCTG...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTAAGGGAGCAGGCTTATaGAGGAGCACAGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCKGAGL*RSTGTS
Trigger: ACTTGTCCCTGTGCTCCTCCATAAGCCTGCTCCCTT...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGTCTGGCTCTGTTGCCTaGGCTGTACCACAGTGGTAT +
Preference number: 4 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLSGSVA*AVPQWY
Trigger: ATACCACTGTGGTACAGCCCAGGCAACAGAGCCAGA...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGGCTCAGCAGCTCATCTaGATGTGCCCGGTGTTCGCG +
Preference number: 4 (lower is better)
Translates to: SVPTWALQQMYLVGFSKEAQQLI*MCPVFA
Trigger: CGCGAACACCGGGCACATCCAGATGAGCTGCTGAGC...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR TCA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCAGCCTAATTCTTCCTaGAAGCCCATCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLQPNSS*KPIHWT
Trigger: TGTCCAGTGGATGGGCTTTCAGGAAGAATTAGGCTG...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp GCCTTGAACTCCTGGGCTGAAGCTCAAGTAATCCTCCAGTCTCGGCCTCTTAAGAGCTCACTGCAGCCTTaGACTCCTGGGCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ALNSWAEAQVILQSRPLKSSLQP*TPGLKL
Trigger: GAGCTTCAGCCCAGGAGTTCAAGGCTGCAGTGAGCT...CTTAAGAGGCCGAGACTGGAGGATTACTTGAGCTTCAGCCCAGGAGTTCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTATCCACTGGACAGTCTaGCATGGTTTCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCIHWTV*HGFCMC
Trigger: GCACATGCAGAAACCATGGCAGACTGTCCAGTGGAT...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCCTGAGACATGCTCTTTCCTaGCCTTTTCCACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VSSQSSQWAVTCPLLCCLRHALS*PFPLCS
Trigger: AGAGCAGAGTGGAAAAGGCCAGGAAAGAGCATGTCT...CAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCACATTTGTCGCGGACCTaGCGCAGTCGCTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPHLSRT*RSRSPP
Trigger: CGGGGGAGAGCGACTGCGCCAGGTCCGCGACAAATG...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCTGGTCTTGAATTCCTaGATTCAAGCAGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GGAQGQVPHLGDAFPRLCLVLNS*IQAVLP
Trigger: TGGGAGGACTGCTTGAATCCAGGAATTCAAGACCAG...ACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR CAA 72 bp CTCGGCAACGTCACCTCTGAGCTGGCTTTTCCCACCTaGTGCACTGTTATCTTCAGGCTACTGCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LGNVTSELAFPT*CTVIFRLLPFR
Trigger: TCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGATTTGTCCCAGACCTTaGACCAGCACACAGACTCCG +
Preference number: 4 (lower is better)
Translates to: SVPTWALQQMYLVGFSKEICPRP*TSTQTP
Trigger: CGGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAAT...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp ACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCTCTCCTGTGCTGCCTaGCCCTTGCTCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TLELRRNIKNPGNTRAKFLSCAA*PLLMLA
Trigger: TGCCAGCATGAGCAAGGGGCAGGCAGCACAGGAGAG...AAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCAACGTTCCTGTTAGCCTaGGCGCCCACCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPTFLLA*APTPQL
Trigger: GAGCTGAGGGGTGGGCGCGCAGGCTAACAGGAACGT...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGGCAGAGAGGCCCTTaGGGCCGGTGCAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKGQRGP*GRCRSR
Trigger: ACGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCC...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp ACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCCTCACAGCAAGAATGTCTTCAGTaGACAGGCAGTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: TGTSSPSRRCLPQTVSSQQECLQ*TGSSRH
Trigger: ATGTCTGGAACTGCCTGTTCACTGAAGACATTCTTG...CTGTGAGGACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAGGCCCTTGGGGCCGGTaGAGGAGCCGTCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAGPWGR*RSRLPR
Trigger: CCGAGGGAGACGGCTCCTGCACCGGCCCCAAGGGCC...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGCAAAATGGGCAGCAGTaGCTCGGGAAACTGCAGACT +
Preference number: 4 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLQNGQQ*LGKLQT
Trigger: AGTCTGCAGTTTCCCGAGCCACTGCTGCCCATTTTG...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR TCA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACTTAGCTCAGCAAGGATaGAGTAGGGAATGGCCATCA +
Preference number: 4 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDLAQQG*SREWPS
Trigger: TGATGGCCATTCCCTACTTCATCCTTGCTGAGCTAA...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCACGGCAACGTCACCTCTaGGCTGGCTTTTCCCACCTT +
Preference number: 4 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPRQRHL*AGFSHL
Trigger: AAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCG...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAAACCCAAGTATGACCTaGCTGCACTACCATCCGGCG +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLNPSMT*LHYHPA
Trigger: CGCCGGATGGTAGTGCAGTCAGGTCATACTTGGGTT...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR GCA 90 bp CCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCATTTGTCCCAGACCTTaGACCAGCACACAGACTCCG +
Preference number: 4 (lower is better)
Translates to: PWSSEETSRILETHGPSFICPRP*TSTQTP
Trigger: CGGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAAT...GAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp ATCATACTGCCTGACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACGTGCTGCCTGCCCCTTaGTCATGCTGGCAGCCTAAT +
Preference number: 4 (lower is better)
Translates to: IILPDPGAQKKHQESWKHVLPAP*SCWQPN
Trigger: ATTAGGCTGCCAGCATGAGCAAGGGGCAGGCAGCAC...GTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGGCAGTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp ATCATACTGCCTGACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACTCCCCATCTAGGCGATaGCTTCCCCAGACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: IILPDPGAQKKHQESWKHSPSRR*LPQTVS
Trigger: GGACACAGTCTGGGGAAGGCATCGCCTAGATGGGGA...GTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGGCAGTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GCCTTGAACTCCTGGGCTGAAGCTCAAGTAATCCTCCAGTCTCGGCCTCTTAAGTTTCCATTTCCTTTCTaGGTGGCACTGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ALNSWAEAQVILQSRPLKFPFPF*VALAWE
Trigger: TTCCCAAGCCAGTGCCACCCAGAAAGGAAATGGAAA...CTTAAGAGGCCGAGACTGGAGGATTACTTGAGCTTCAGCCCAGGAGTTCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp ACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCCTCACAGTCATCTTCATTTTCCTaGCTGCTCTCTAACACGTCA +
Preference number: 4 (lower is better)
Translates to: TGTSSPSRRCLPQTVSSQSSSFS*LLSNTS
Trigger: TGACGTGTTAGAGAGCAGCCAGGAAAATGAAGATGA...CTGTGAGGACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAGGGCAGAGAGGCCCTTaGGGCCGGTGCAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAGQRGP*GRCRSR
Trigger: ACGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCC...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACACATTTGTCGCGGACCTaGCGCAGTCGCTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTHLSRT*RSRSPP
Trigger: CGGGGGAGAGCGACTGCGCCAGGTCCGCGACAAATG...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCCTCACAGAAACATCAAGAATCCTaGAAACACACGGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: TGTSSPSRRCLPQTVSSQKHQES*KHTGQV
Trigger: AACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTT...CTGTGAGGACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR CAA 72 bp AGTTCTTACTGGGCTCTGGTAACACTGTTTCCCTCCTaGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSYWALVTLFPS*PFKAQNGNGFL
Trigger: CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTACCAGAGCCCAGTAAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGTTAGCTCAGCAAGGATaGAGTAGGGAATGGCCATCA +
Preference number: 4 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLLAQQG*SREWPS
Trigger: TGATGGCCATTCCCTACTTCATCCTTGCTGAGCTAA...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGGCTTTTCCCACCTTGTaGACTGTTATCTTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: SVPTWALQQMYLVGFSKEAFPTL*TVIFRL
Trigger: TAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGC...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAACTCCACCCTTCTCTGTaGCCACCTGGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HQKEPWLIQTAIPILTCELHPSL*PPGLSS
Trigger: GCTGGAGAGCCCAGGTGGGCACAGAGAAGGGTGGAG...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp CCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCTGGCCTTTTCCACTCTaGTCTGAGGCTCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PWSSEETSRILETHGPSFWPFPL*SEALLK
Trigger: TTTCAGCAGAGCCTCAGAGCAGAGTGGAAAAGGCCA...GAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp CCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCAGGCAGTTCCAGACATaGTCTTTCCTGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PWSSEETSRILETHGPSFRQFQT*SFLAFS
Trigger: GGAAAAGGCCAGGAAAGAGCATGTCTGGAACTGCCT...GAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp GCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAACCTGCCCCTTGCTCATaGTGGCAGCCTAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: AQKKHQESWKHTGQVSCEPAPCS*WQPNSS
Trigger: GGAAGAATTAGGCTGCCAGCATGAGCAAGGGGCAGG...TTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAAGCCAGCAGGGGCCCTaGTGGTCAGCTAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQASQQGP*WSARPA
Trigger: GGCTGGCCTAGCTGACCACCAGGGCCCCTGCTGGCT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATAGCCAGCAGGGGCCCTaGTGGTCAGCTAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYSQQGP*WSARPA
Trigger: GGCTGGCCTAGCTGACCACCAGGGCCCCTGCTGGCT...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp CCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCGCAGCCTTGAACTCCTaGGCTGAAGCTCAAGTAATC +
Preference number: 4 (lower is better)
Translates to: PWSSEETSRILETHGPSFAALNS*AEAQVI
Trigger: GATTACTTGAGCTTCAGCCCAGGAGTTCAAGGCTGC...GAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACCTGCTTCACACATGTTaGAGGAGAGACATACCTGTG +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNLLHTC*RRDIPV
Trigger: CACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAG...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp CCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCTTCAATCATACTGCCTaGCCCTGGAGCTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PWSSEETSRILETHGPSFFNHTA*PWSSEE
Trigger: TTCTTCTGAGCTCCAGGGTCAGGCAGTATGATTGAA...GAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp CATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGCACATCAGTTCTCAGATCAGAAGTGTaGCCTTCCACGTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: HQESWKHTGQVSCEGTSVLRSEV*PSTWVL
Trigger: AAGAACCCACGTGGAAGGTCACACTTCTGATCTGAG...AACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAACAGATAACCCAAGTATaGCCTGACTGCACTACCATC +
Preference number: 4 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKQITQV*PDCTTI
Trigger: GATGGTAGTGCAGTCAGGTCATACTTGGGTTATCTG...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR TCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGTCTGCCTCTAAGGAATaGCAAGATCTGAACTACTCA +
Preference number: 4 (lower is better)
Translates to: SVPTWALQQMYLVGFSKESASKE*QDLNYS
Trigger: TGAGTAGTTCAGATCTTGTCATTCCTTAGAGGCAGA...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR GCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGGTGTTACATAGACCGTaGCCAAACAGATACACAATG +
Preference number: 4 (lower is better)
Translates to: SVPTWALQQMYLVGFSKEVLHRP*PNRYTM
Trigger: CATTGTGTATCTGTTTGGGCACGGTCTATGTAACAC...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GCAGAACTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAACTCCACCCTTCTCTGTaGCCACCTGGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AELVLHRPCPNRYTMKNQLHPSL*PPGLSS
Trigger: GCTGGAGAGCCCAGGTGGGCACAGAGAAGGGTGGAG...TTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAGTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCACAGCCCCTTCGCTCCTaGACTCCACGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAQPLRS*TPRAER
Trigger: CCTCTCTGCCCGTGGAGTGCAGGAGCGAAGGGGCTG...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACTTTCCATTTCCTTTCTaGGTGGCACTGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNFPFPF*VALAWE
Trigger: TTCCCAAGCCAGTGCCACCCAGAAAGGAAATGGAAA...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TCTGTGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGTCATCTTCATTTTCCTaGCTGCTCTCTAACACGTCA +
Preference number: 4 (lower is better)
Translates to: SVPTWALQQMYLVGFSKESSSFS*LLSNTS
Trigger: TGACGTGTTAGAGAGCAGCCAGGAAAATGAAGATGA...CTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAATTCCTCTGTGTCAGCTaGAATGCCTTCAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKFLCVS*NAFSSK
Trigger: CTTAGAGCTGAAGGCATTCCAGCTGACACAGAGGAA...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGTTTTGGCTTCTTTCTTaGAGACGTGGTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLFWLLS*RRGSAV
Trigger: TACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAA...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAACGGCAACGTCACCTCTaGGCTGGCTTTTCCCACCTT +
Preference number: 4 (lower is better)
Translates to: HQKEPWLIQTAIPILTCERQRHL*AGFSHL
Trigger: AAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCG...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTACTGCTTCACACATGTTaGAGGAGAGACATACCTGTG +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLLLHTC*RRDIPV
Trigger: CACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAG...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGGCCAAGTTTCCTGTaGAGGCACATCAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: AQKKHQESWKHTGQVSCEGPSFL*RHISSQ
Trigger: TTGAGAACTGATGTGCCTTCACAGGAAACTTGGCCC...TTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCACTTTCGCTGTGGCCGTaGGCCTTTCACCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQALSLWP*AFHPSL
Trigger: CAGGGACGGGTGAAAGGCTCACGGCCACAGCGAAAG...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR GCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATCTCCACCCTTCTCTGTaGCCACCTGGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYLHPSL*PPGLSS
Trigger: GCTGGAGAGCCCAGGTGGGCACAGAGAAGGGTGGAG...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ATCATACTGCCTGACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACCTGGACAGTCTGCCATaGTTTCTGCATGTGCTGACA +
Preference number: 4 (lower is better)
Translates to: IILPDPGAQKKHQESWKHLDSLP*FLHVLT
Trigger: TGTCAGCACATGCAGAAACCATGGCAGACTGTCCAG...GTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGGCAGTATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACTATAGAGTAACAAAATaGGCAGCAGTGGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNYRVTK*AAVARE
Trigger: TTCCCGAGCCACTGCTGCCCATTTTGTTACTCTATA...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR TCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACTTTTGGCTTCTTTCTTaGAGACGTGGTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNFWLLS*RRGSAV
Trigger: TACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAA...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGTCTCTTCTCATGTCATaGCAATGTTGTATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLSLLMS*QCCIKE
Trigger: CTCCTTGATACAACATTGTCATGACATGAGAAGAGA...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp ACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCAGGGCTCTTCTCCTTaGTCGATCTTAAAGATCACT +
Preference number: 4 (lower is better)
Translates to: TLELRRNIKNPGNTRAKFQGSSP*SILKIT
Trigger: AGTGATCTTTAAGATCGAGCAAGGAGAAGAGCCCTG...AAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp GCTGGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTGCCCTTCAGAGACAAACCTTAAATTCATaGAGAAGGACTTCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: AGFSHLVHCYLQATALQRQTLNS*RRTSRK
Trigger: TTTGCGGGAAGTCCTTCTGCATGAATTTAAGGTTTG...TCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR GCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACGGAAGAATACAGAGCTaGTTACCTTACACCACATAC +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNGRIQS*LPYTTY
Trigger: GTATGTGGTGTAAGGTAAGCAGCTCTGTATTCTTCC...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp CATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGCACATCAGTTAAACTTCAATCATACTaGCTGACCCTGGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: HQESWKHTGQVSCEGTSVKLQSY*LTLELR
Trigger: TCTGAGCTCCAGGGTCAGGCAGTATGATTGAAGTTT...AACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCATTTCCATTTCCTTTCTaGGTGGCACTGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPFPFPF*VALAWE
Trigger: TTCCCAAGCCAGTGCCACCCAGAAAGGAAATGGAAA...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACTCATCTTCATTTTCCTaGCTGCTCTCTAACACGTCA +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNSSSFS*LLSNTS
Trigger: TGACGTGTTAGAGAGCAGCCAGGAAAATGAAGATGA...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCAAGATTGGCCAAAACTTaGCTGACTGAGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPRLAKT*LTEILV
Trigger: CACCAGGATCTCAGTCAGCCAAGTTTTGGCCAATCT...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CCA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAATCTTTCTTGAAGACGTaGTTCAGCTGTAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKSFLKT*FSCKWP
Trigger: TGGCCATTTACAGCTGAACCACGTCTTCAAGAAAGA...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCACGTCACCTCTGAGCTaGCTTTTCCCACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: WSWEETDVQCTLLYSIFITSPLS*LFPPCA
Trigger: TGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGT...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACACCTGTATGTGTTCGCTaGTGGTTGGTCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTPVCVR*WLVRCG
Trigger: ACCACACCTGACCAACCATCAGCGAACACATACAGG...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR TCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATCGGCAACGTCACCTCTaGGCTGGCTTTTCCCACCTT +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYRQRHL*AGFSHL
Trigger: AAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCCG...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCCACTGTTTCCCTCCTTaGCCTTCAAGGCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: WSWEETDVQCTLLYSIFIHCFPP*PSRLRM
Trigger: CATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTG...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAGGAAGAATACAGAGCTaGTTACCTTACACCACATAC +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLGRIQS*LPYTTY
Trigger: GTATGTGGTGTAAGGTAAGCAGCTCTGTATTCTTCC...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACAATTTGTCCCAGACCTTaGACCAGCACACAGACTCCG +
Preference number: 4 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTICPRP*TSTQTP
Trigger: CGGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAAT...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTAGCCTTCGCCGGCCTTaGAGTTCGGAGATTCACCTG +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLSLRRP*SSEIHL
Trigger: CAGGTGAATCTCCGAACTGCAAGGCCGGCGAAGGCT...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACTTTCCCACAAGGGACTaGAGTCCAGGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYFPTRD*SPGKDS
Trigger: CGAGTCCTTCCCTGGACTCCAGTCCCTTGTGGGAAA...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357328.8
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCAGAGGTGTCCATGTGTaGCTCCGATATATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WSWEETDVQCTLLYSIFIRGVHV*LRYMLS
Trigger: GCTCAGCATATATCGGAGCCACACATGGACACCTCT...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTATCATCTTCATTTTCCTaGCTGCTCTCTAACACGTCA +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLSSSFS*LLSNTS
Trigger: TGACGTGTTAGAGAGCAGCCAGGAAAATGAAGATGA...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTATCTTTCTTGAAGACGTaGTTCAGCTGTAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLSFLKT*FSCKWP
Trigger: TGGCCATTTACAGCTGAACCACGTCTTCAAGAAAGA...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TGCCCACCTGGGCTCTCCAGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACTAAAAACATATACTaGCCAACCTACAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: CPPGLSSRCIWLVSPKRDTKNIY*PTYKET
Trigger: AGTCTCTTTGTAGGTTGGCCAGTATATGTTTTTAGT...GTCTCTCTTTGGAGAAACCAACCAGATACATCTGCTGGAGAGCCCAGGTGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TTAGCTTTGACTAATCTGGACTTACCACCTAAGTCATCTGGGAGAAGGATGCACTTCCTCTGTGTCAGCTaGAATGCCTTCAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: LALTNLDLPPKSSGRRMHFLCVS*NAFSSK
Trigger: CTTAGAGCTGAAGGCATTCCAGCTGACACAGAGGAA...GTGCATCCTTCTCCCAGATGACTTAGGTGGTAAGTCCAGATTAGTCAAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp AGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACCTGTATGTGTTCGCTaGTGGTTGGTCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SLFSCHDNVVSRRSFPEVPVCVR*WLVRCG
Trigger: ACCACACCTGACCAACCATCAGCGAACACATACAGG...TACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR TCA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACACATACCGCCACTTTTTaGGGAGTGCAGTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTHTATF*GVQCYC
Trigger: GCAGTAACACTGCACTCCTCAAAAAGTGGCGGTATG...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp ATCATACTGCCTGACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACACAGCACCTAAACAATaGAAGTGCTCAAAACAACCC +
Preference number: 4 (lower is better)
Translates to: IILPDPGAQKKHQESWKHTAPKQ*KCSKQP
Trigger: GGGTTGTTTTGAGCACTTTCATTGTTTAGGTGCTGT...GTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGGCAGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR TCA 90 bp GCTCAGAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGTTTCTGCATGTGCTaGCATCACCAAGTGTTATTT +
Preference number: 4 (lower is better)
Translates to: AQKKHQESWKHTGQVSCEGFCMC*HHQVLF
Trigger: AAATAACACTTGGTGATGTCAGCACATGCAGAAACC...TTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTCTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR GCA 90 bp TTAGCTTTGACTAATCTGGACTTACCACCTAAGTCATCTGGGAGAAGGATGCACCAGGGCTCTTCTCCTTaGTCGATCTTAAAGATCACT +
Preference number: 4 (lower is better)
Translates to: LALTNLDLPPKSSGRRMHQGSSP*SILKIT
Trigger: AGTGATCTTTAAGATCGAGCAAGGAGAAGAGCCCTG...GTGCATCCTTCTCCCAGATGACTTAGGTGGTAAGTCCAGATTAGTCAAAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACATATTCATGCATATATaGCAGGAAACAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNIFMHI*QETVRG
Trigger: TCCTCTGACTGTTTCCTGGCATATATGCATGAATAT...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTATCCCAAACATCTCATTaGTCCCAAGTTCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVSQTSH*SQVHPN
Trigger: GTTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGA...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGCACTGTTTCCCTCCTTaGCCTTCAAGGCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKHCFPP*PSRLRM
Trigger: CATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTG...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAAGTTCGGAGATTCACCTaGCTATACAGGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: HQKEPWLIQTAIPILTCEVRRFT*LYRSTH
Trigger: GTGTGTGGACCTGTATAGGCAGGTGAATCTCCGAAC...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCTTTCCATTTCCTTTCTaGGTGGCACTGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: WSWEETDVQCTLLYSIFIFPFPF*VALAWE
Trigger: TTCCCAAGCCAGTGCCACCCAGAAAGGAAATGGAAA...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GCTGGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTGCCCTTCAGAGAACTAAAAACATATACTaGCCAACCTACAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: AGFSHLVHCYLQATALQRTKNIY*PTYKET
Trigger: AGTCTCTTTGTAGGTTGGCCAGTATATGTTTTTAGT...TCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACACGTCACCTCTGAGCTaGCTTTTCCCACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYTSPLS*LFPPCA
Trigger: TGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGT...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTATTCCTCTGTGTCAGCTaGAATGCCTTCAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVFLCVS*NAFSSK
Trigger: CTTAGAGCTGAAGGCATTCCAGCTGACACAGAGGAA...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTAGGCTCAGAATGGCAATaGCTTCCTGCTGATACAAGT +
Preference number: 4 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVGSEWQ*LPADTS
Trigger: ACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCC...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAGGAAGTGATGAGTGCTaGGTATTTATTACCTTTGTT +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLGSDEC*VFITFV
Trigger: AACAAAGGTAATAAATACTCAGCACTCATCACTTCC...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGCTGCTTCACACATGTTaGAGGAGAGACATACCTGTG +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKLLHTC*RRDIPV
Trigger: CACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAG...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAATATTCATGCATATATaGCAGGAAACAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLIFMHI*QETVRG
Trigger: TCCTCTGACTGTTTCCTGGCATATATGCATGAATAT...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGTCCCAAACATCTCATTaGTCCCAAGTTCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKSQTSH*SQVHPN
Trigger: GTTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGA...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GCAGAACTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAACACTGTTTCCCTCCTTaGCCTTCAAGGCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: AELVLHRPCPNRYTMKNQHCFPP*PSRLRM
Trigger: CATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTG...TTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAATTTGTCCCAGACCTTaGACCAGCACACAGACTCCG +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAICPRP*TSTQTP
Trigger: CGGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAAT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCAAATGACACTTGTTCCTaGGATTTGTTCATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPNDTCS*DLFIFR
Trigger: GCGGAAAATGAACAAATCCCAGGAACAAGTGTCATT...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAAATAGAAGGGGTATGTaGTTTGTATTGCCAAATACG +
Preference number: 4 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLNRRGM*FVLPNT
Trigger: CGTATTTGGCAATACAAACCACATACCCCTTCTATT...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTACGTCACCTCTGAGCTaGCTTTTCCCACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLTSPLS*LFPPCA
Trigger: TGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGT...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGCTCAGAATGGCAATaGCTTCCTGCTGATACAAGT +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKGSEWQ*LPADTS
Trigger: ACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCC...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
3UTR CAA 72 bp AAGCCCAGCAGAGTCTCTTCTCATGTCATGACAATGTaGTATCAAGGAGATCTTTCCCAGAAGTACTACACA +
Preference number: 4 (lower is better)
Translates to: KPSRVSSHVMTM*YQGDLSQKYYT
Trigger: TGTGTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACTCTGCTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATCATACCGCCACTTTTTaGGGAGTGCAGTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYHTATF*GVQCYC
Trigger: GCAGTAACACTGCACTCCTCAAAAAGTGGCGGTATG...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACTTAGCTCAGCAAGGATaGAGTAGGGAATGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYLAQQG*SREWPS
Trigger: TGATGGCCATTCCCTACTTCATCCTTGCTGAGCTAA...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGACCATGTTACAGACATaGAAAAGCCCAGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKTMLQT*KSPAES
Trigger: AGACTCTGCTGGGCTTTTTCATGTCTGTAACATGGT...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACTCCCAAACATCTCATTaGTCCCAAGTTCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYSQTSH*SQVHPN
Trigger: GTTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGA...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTAGGAAGAATACAGAGCTaGTTACCTTACACCACATAC +
Preference number: 4 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVGRIQS*LPYTTY
Trigger: GTATGTGGTGTAAGGTAAGCAGCTCTGTATTCTTCC...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAAGAGGTGTCCATGTGTaGCTCCGATATATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQARGVHV*LRYMLS
Trigger: GCTCAGCATATATCGGAGCCACACATGGACACCTCT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000374648.7
ENST00000395867.8
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCTCTTTCTTGAAGACGTaGTTCAGCTGTAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: WSWEETDVQCTLLYSIFISFLKT*FSCKWP
Trigger: TGGCCATTTACAGCTGAACCACGTCTTCAAGAAAGA...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GCAGAACTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGCTCAGAATGGCAATaGCTTCCTGCTGATACAAGT +
Preference number: 4 (lower is better)
Translates to: AELVLHRPCPNRYTMKNQGSEWQ*LPADTS
Trigger: ACTTGTATCAGCAGGAAGCCATTGCCATTCTGAGCC...TTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAGTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCGCAGATGTATCTGGTTaGTTTCTCCAAAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: WSWEETDVQCTLLYSIFIADVSG*FLQRET
Trigger: TGTCTCTCTTTGGAGAAACCAACCAGATACATCTGC...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp CATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGCACATCAGTTTTATTCCAAGGATGCTaGCTTAGAAACTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: HQESWKHTGQVSCEGTSVLFQGC*LRNFNH
Trigger: ATGATTGAAGTTTCTAAGCCAGCATCCTTGGAATAA...AACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
3UTR CAA 72 bp ATATCAAAAGGGCCTTTCATTACATACCGCCACTTTTaGAGGAGTGCAGTGTTACTGCTTGTTAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ISKGPFITYRHF*RSAVLLLVNLC
Trigger: GCAAAGGTTAACAAGCAGTAACACTGCACTCCTCAAAAAGTGGCGGTATGTAATGAAAGGCCCTTTTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp TTAGCTTTGACTAATCTGGACTTACCACCTAAGTCATCTGGGAGAAGGATGCACTTTGTAAGAGCTCTCTaGTGTCCAAACCTTAAATTC +
Preference number: 4 (lower is better)
Translates to: LALTNLDLPPKSSGRRMHFVRAL*CPNLKF
Trigger: GAATTTAAGGTTTGGACATCAGAGAGCTCTTACAAA...GTGCATCCTTCTCCCAGATGACTTAGGTGGTAAGTCCAGATTAGTCAAAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR TCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACACCATGTTACAGACATaGAAAAGCCCAGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYTMLQT*KSPAES
Trigger: AGACTCTGCTGGGCTTTTTCATGTCTGTAACATGGT...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAAACAGCACCTAAACAATaGAAGTGCTCAAAACAACCC +
Preference number: 4 (lower is better)
Translates to: HQKEPWLIQTAIPILTCETAPKQ*KCSKQP
Trigger: GGGTTGTTTTGAGCACTTTCATTGTTTAGGTGCTGT...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAAAGGAATGACAAGATCTaGACTACTCACCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: HQKEPWLIQTAIPILTCERNDKI*TTHLLK
Trigger: TTTGAGGAGGTGAGTAGTTCAGATCTTGTCATTCCT...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR GCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACCAGGGCTCTTCTCCTTaGTCGATCTTAAAGATCACT +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYQGSSP*SILKIT
Trigger: AGTGATCTTTAAGATCGAGCAAGGAGAAGAGCCCTG...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCCAAACCTTAAATTCATaGAGAAGGACTTCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: WSWEETDVQCTLLYSIFIQTLNS*RRTSRK
Trigger: TTTGCGGGAAGTCCTTCTGCATGAATTTAAGGTTTG...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR GCA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTATTATCTTCAGGCTACTaGCCTTCAGAGATAAAAACG +
Preference number: 4 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVLSSGY*PSEIKT
Trigger: CGTTTTTATCTCTGAAGGGCAGTAGCCTGAAGATAA...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCATTTCCATTTCCTTTCTaGGTGGCACTGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAFPFPF*VALAWE
Trigger: TTCCCAAGCCAGTGCCACCCAGAAAGGAAATGGAAA...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357328.8
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAAGATTGGCCAAAACTTaGCTGACTGAGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQARLAKT*LTEILV
Trigger: CACCAGGATCTCAGTCAGCCAAGTTTTGGCCAATCT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CCA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCAAACTGGCTATTTATTTaGAAGAATACAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPNWLFI*KNTELL
Trigger: AAGCAGCTCTGTATTCTTCCAAATAAATAGCCAGTT...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTACCATGTTACAGACATaGAAAAGCCCAGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLTMLQT*KSPAES
Trigger: AGACTCTGCTGGGCTTTTTCATGTCTGTAACATGGT...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTGGGAAACTGCAGACTTaGCTTCTAATCTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLGKLQT*LLISVL
Trigger: CAGAACTGAGATTAGAAGTCAAGTCTGCAGTTTCCC...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR GCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCACAGGGCTCTTCTCCTTaGTCGATCTTAAAGATCACT +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAQGSSP*SILKIT
Trigger: AGTGATCTTTAAGATCGAGCAAGGAGAAGAGCCCTG...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357328.8
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTACTTCCCGCAAATACTaGATCCATACGGCTCCATTT +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLTSRKY*IHTAPF
Trigger: AAATGGAGCCGTATGGATGCAGTATTTGCGGGAAGT...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR GCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACGGGAAGAGACAGATGTaGAGTGCACACTATTATACA +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYGKRQM*SAHYYT
Trigger: TGTATAATAGTGTGCACTGCACATCTGTCTCTTCCC...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp AGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTAGTGTTACATAGACCGTaGCCAAACAGATACACAATG +
Preference number: 4 (lower is better)
Translates to: SLFSCHDNVVSRRSFPEVVLHRP*PNRYTM
Trigger: CATTGTGTATCTGTTTGGGCACGGTCTATGTAACAC...TACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAATTATCTTCAGGCTACTaGCCTTCAGAGATAAAAACG +
Preference number: 4 (lower is better)
Translates to: HQKEPWLIQTAIPILTCELSSGY*PSEIKT
Trigger: CGTTTTTATCTCTGAAGGGCAGTAGCCTGAAGATAA...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAGCTTTTCCCACCTTGTaGACTGTTATCTTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAAFPTL*TVIFRL
Trigger: TAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGC...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGAAACCGAGTCTCCCGTaGATAATTGTGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKKPSLP*IIVSNS
Trigger: TGAATTAGACACAATTATCCACGGGAGACTCGGTTT...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATTTTTGGCTTCTTTCTTaGAGACGTGGTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYFWLLS*RRGSAV
Trigger: TACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAA...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACTCTCTTCTCATGTCATaGCAATGTTGTATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYSLLMS*QCCIKE
Trigger: CTCCTTGATACAACATTGTCATGACATGAGAAGAGA...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GCAGAACTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAATCTCTTCTCATGTCATaGCAATGTTGTATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: AELVLHRPCPNRYTMKNQSLLMS*QCCIKE
Trigger: CTCCTTGATACAACATTGTCATGACATGAGAAGAGA...TTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAGTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAACAGCACCTAAACAATaGAAGTGCTCAAAACAACCC +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQATAPKQ*KCSKQP
Trigger: GGGTTGTTTTGAGCACTTTCATTGTTTAGGTGCTGT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTACAGCACCTAAACAATaGAAGTGCTCAAAACAACCC +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLTAPKQ*KCSKQP
Trigger: GGGTTGTTTTGAGCACTTTCATTGTTTAGGTGCTGT...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATGGGAAGAGACAGATGTaGAGTGCACACTATTATACA +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYGKRQM*SAHYYT
Trigger: TGTATAATAGTGTGCACTGCACATCTGTCTCTTCCC...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR GCA 90 bp AGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTATTATCTTCAGGCTACTaGCCTTCAGAGATAAAAACG +
Preference number: 4 (lower is better)
Translates to: SLFSCHDNVVSRRSFPEVLSSGY*PSEIKT
Trigger: CGTTTTTATCTCTGAAGGGCAGTAGCCTGAAGATAA...TACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCATCATCTTCATTTTCCTaGCTGCTCTCTAACACGTCA +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQASSSFS*LLSNTS
Trigger: TGACGTGTTAGAGAGCAGCCAGGAAAATGAAGATGA...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357328.8
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTAACTAAAAACATATACTaGCCAACCTACAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVTKNIY*PTYKET
Trigger: AGTCTCTTTGTAGGTTGGCCAGTATATGTTTTTAGT...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAGCAGATGTATCTGGTTaGTTTCTCCAAAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAADVSG*FLQRET
Trigger: TGTCTCTCTTTGGAGAAACCAACCAGATACATCTGC...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTGCAGATGTATCTGGTTaGTTTCTCCAAAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLADVSG*FLQRET
Trigger: TGTCTCTCTTTGGAGAAACCAACCAGATACATCTGC...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAAATGACACTTGTTCCTaGGATTTGTTCATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQANDTCS*DLFIFR
Trigger: GCGGAAAATGAACAAATCCCAGGAACAAGTGTCATT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357328.8
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGAACTGGCTATTTATTTaGAAGAATACAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IMSASHMLKERHTCVVPKNWLFI*KNTELL
Trigger: AAGCAGCTCTGTATTCTTCCAAATAAATAGCCAGTT...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTAAACCGAGTCTCCCGTaGATAATTGTGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: FQREFTYANRKAEQTETLKPSLP*IIVSNS
Trigger: TGAATTAGACACAATTATCCACGGGAGACTCGGTTT...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR TCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATTTTGTAAGAGCTCTCTaGTGTCCAAACCTTAAATTC +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYFVRAL*CPNLKF
Trigger: GAATTTAAGGTTTGGACATCAGAGAGCTCTTACAAA...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR GCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAATATTCATGCATATATaGCAGGAAACAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAIFMHI*QETVRG
Trigger: TCCTCTGACTGTTTCCTGGCATATATGCATGAATAT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp CTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAAGGATATAATAGAAGGGGTATGTaGTTTGTATTGCCAAATACG +
Preference number: 4 (lower is better)
Translates to: LVLHRPCPNRYTMKNQGYNRRGM*FVLPNT
Trigger: CGTATTTGGCAATACAAACCACATACCCCTTCTATT...ATATCCTTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CCA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAAACTGGCTATTTATTTaGAAGAATACAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQANWLFI*KNTELL
Trigger: AAGCAGCTCTGTATTCTTCCAAATAAATAGCCAGTT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp ATCATACTGCCTGACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACCGGGCAGAGAGGCCCTaGGGGCCGGTGCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: IILPDPGAQKKHQESWKHRAERP*GPVQEP
Trigger: CGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCCG...GTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGGCAGTATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp ACAGGGACAAGTTCCCCATCTAGGCGATGCCTTCCCCAGACTGTGTCCTCACAGCAGGGTCTGGCTCTGTaGCCTGGGCTGTACCACAGT +
Preference number: 5 (lower is better)
Translates to: TGTSSPSRRCLPQTVSSQQGLAL*PGLYHS
Trigger: ACTGTGGTACAGCCCAGGCAACAGAGCCAGACCCTG...CTGTGAGGACACAGTCTGGGGAAGGCATCGCCTAGATGGGGAACTTGTCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGAATTTGTCCCAGACCTaGCACCAGCACACAGACTCC +
Preference number: 5 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLNLSQT*HQHTDS
Trigger: GGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAATT...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp GTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCCTGTTGCCCAAGCTGGTCTaGAATTCCTGGATTCAAGCA +
Preference number: 5 (lower is better)
Translates to: VSSQSSQWAVTCPLLCCLLPKLV*NSWIQA
Trigger: TGCTTGAATCCAGGAATTCAAGACCAGCTTGGGCAA...CAGGCAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp GACTGTGTCCTCACAGTCCTCACAGTGGGCAGTGACGTGTCCTCTCCTGTGCTGCTGGGTGGCACTGGCTaGGGAATCCTTTTTCTAATA +
Preference number: 5 (lower is better)
Translates to: DCVLTVLTVGSDVSSPVLLGGTG*GILFLI
Trigger: TATTAGAAAAAGGATTCCCAAGCCAGTGCCACCCAG...CAGCACAGGAGAGGACACGTCACTGCCCACTGTGAGGACTGTGAGGACACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp AGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACGGGCAGAGAGGCCCTaGGGGCCGGTGCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SLFSCHDNVVSRRSFPEVRAERP*GPVQEP
Trigger: CGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCCG...TACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCACGGGCAGAGAGGCCCTaGGGGCCGGTGCAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQARAERP*GPVQEP
Trigger: CGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCCG...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS GCA 90 bp AATGTCAGGAGAGCCTTCGCCGGCCTTGCAGTTCGGAGATTCACCTaGCTATACAGGTCCACACACAAGATACTTACGTGTCCATGTGTG +
Preference number: 5 (lower is better)
Translates to: NVRRAFAGLAVRRFT*LYRSTHKILTCPCV
Trigger: CACACATGGACACGTAAGTATCTTGTGTGTGGACCTGTATAGGCAGGTGAATCTCCGAACTGCAAGGCCGGCGAAGGCTCTCCTGACATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CAA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGAATTTGTCCCAGACCTaGCACCAGCACACAGACTCC +
Preference number: 5 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLNLSQT*HQHTDS
Trigger: GGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAATT...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp AGGAAGGGAGCAGGCTTATGGAGGAGCACAGGGACAAGTTCCCCATCTAGGCGATCTCTCTTCTTAAATTaGTCCCAGACCTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: RKGAGLWRSTGTSSPSRRSLFLN*SQTLHQ
Trigger: CTGGTGCAAGGTCTGGGACAAATTTAAGAAGAGAGA...TCGCCTAGATGGGGAACTTGTCCCTGTGCTCCTCCATAAGCCTGCTCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACCTGGCTTTTCCCACCTaGTGCACTGTTATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNLAFPT*CTVIFR
Trigger: CCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAG...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACACACTGTTTCCCTCCTaGCCCTTCAAGGCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNTLFPS*PFKAQN
Trigger: ATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGT...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAACACTGTTTCCCTCCTaGCCCTTCAAGGCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKTLFPS*PFKAQN
Trigger: ATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGT...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAACTGGGTGGCACTGGCTaGGGAATCCTTTTTCTAATA +
Preference number: 5 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKLGGTG*GILFLI
Trigger: TATTAGAAAAAGGATTCCCAAGCCAGTGCCACCCAG...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAACACTGTTTCCCTCCTaGCCCTTCAAGGCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLTLFPS*PFKAQN
Trigger: ATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGT...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS TCA 90 bp TTCCATCTTTCAAATAAGGTCAAAACAGATAACCCAAGTATGACCTaGCTGCACTACCATCCGGCGGGGATATCAGGCCAAGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: FHLSNKVKTDNPSMT*LHYHPAGISGQERR
Trigger: CCTCCTCTCTTGGCCTGATATCCCCGCCGGATGGTAGTGCAGTCAGGTCATACTTGGGTTATCTGTTTTGACCTTATTTGAAAGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CAA 90 bp GCAGAACTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAATCCGGAGGCGAGGGATaGTTTCCCACAAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: AELVLHRPCPNRYTMKNQSGGEG*FPTRDW
Trigger: CCAGTCCCTTGTGGGAAACAATCCCTCGCCTCCGGA...TTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAGTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357328.8
CDS-3UTR CAA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCATTGTGTCTAATTCATTaGTCGCGGACCTGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPLCLIH*SRTWRS
Trigger: ACTGCGCCAGGTCCGCGACAAATGAATTAGACACAA...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGATGTGCTGTAAATATTaGACAGCAGGTTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLMCCKY*TAGSLR
Trigger: TCTCAGAGAACCTGCTGTCAAATATTTACAGCACAT...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCGTGTTTCACTGTCCCTaGTTTCTGGCCCACACCACT +
Preference number: 5 (lower is better)
Translates to: WSWEETDVQCTLLYSIFIVFHCP*FLAHTT
Trigger: AGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GTAACACTGTTTCCCTCCTTGCCCTTCAAGGCTCAGAATGGCAATGGCTTCCTGTTCCATGTTTTGTTGTaGTGGAATAGAAGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: VTLFPSLPFKAQNGNGFLFHVLL*WNRSSQ
Trigger: TTGGGAGCTTCTATTCCACAACAACAAAACATGGAA...CAGGAAGCCATTGCCATTCTGAGCCTTGAAGGGCAAGGAGGGAAACAGTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAGAGCCTTCGCCGGCCTaGCAGTTCGGAGATTCACCT +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAEPSPA*QFGDSP
Trigger: AGGTGAATCTCCGAACTGCAAGGCCGGCGAAGGCTC...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CAA 90 bp TCATGTGGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAACACTTACTGTTTTGTaGTTGTGGAATAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SCGQCLLELLTNVFQGGKTLTVL*LWNRSS
Trigger: GGAGCTTCTATTCCACAACAACAAAACAGTAAGTGT...TTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCCACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GCTGGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTGCCCTTCAGAGACCCAAATTGAAAGTTTaGCTTCCTCTATCTCCATTT +
Preference number: 5 (lower is better)
Translates to: AGFSHLVHCYLQATALQRPKLKV*LPLSPF
Trigger: AAATGGAGATAGAGGAAGCAAAACTTTCAATTTGGG...TCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GGGCAGTGTCTCTTAGAACTGCTGACCAATGTGTTCCAAGGGGGCAAAAGAAACACTATACTCAAAAGATaGGCCAAAACTTGGCTGACT +
Preference number: 5 (lower is better)
Translates to: GQCLLELLTNVFQGGKRNTILKR*AKTWLT
Trigger: AGTCAGCCAAGTTTTGGCCAATCTTTTGAGTATAGT...GTTTCTTTTGCCCCCTTGGAACACATTGGTCAGCAGTTCTAAGAGACACTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTATTTTTGGCTTCTTTCTaGAAGACGTGGTTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLFLASF*KTWFSC
Trigger: ACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAAA...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCCTGGCTTTTCCCACCTaGTGCACTGTTATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WSWEETDVQCTLLYSIFILAFPT*CTVIFR
Trigger: CCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAG...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGTGTTTCACTGTCCCTaGTTTCTGGCCCACACCACT +
Preference number: 5 (lower is better)
Translates to: IMSASHMLKERHTCVVPKVFHCP*FLAHTT
Trigger: AGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGAATTTGTCCCAGACCTaGCACCAGCACACAGACTCC +
Preference number: 5 (lower is better)
Translates to: IMSASHMLKERHTCVVPKNLSQT*HQHTDS
Trigger: GGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAATT...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GCTGGCTTTTCCCACCTTGTGCACTGTTATCTTCAGGCTACTGCCCTTCAGAGATTCAGATTCCATGTTTaGTTGTTGTGGAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: AGFSHLVHCYLQATALQRFRFHV*LLWNRS
Trigger: GCTTCTATTCCACAACAACAAAACATGGAATCTGAA...TCTCTGAAGGGCAGTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CAA 90 bp CATGAAAAAGCCCAGCAGAGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGCTGGGTGGCACTGGCTaGGGAATCCTTTTTCTAATA +
Preference number: 5 (lower is better)
Translates to: HEKAQQSLFSCHDNVVSRLGGTG*GILFLI
Trigger: TATTAGAAAAAGGATTCCCAAGCCAGTGCCACCCAG...CCTTGATACAACATTGTCATGACATGAGAAGAGACTCTGCTGGGCTTTTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp AGCAGATGTATCTGGTTGGTTTCTCCAAAGAGAGACACCAGCAATTTGGCACCATTTTTGGCTTCTTTCTaGAAGACGTGGTTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SRCIWLVSPKRDTSNLAPFLASF*KTWFSC
Trigger: ACAGCTGAACCACGTCTTCAAGAAAGAAGCCAAAAA...TGGTGCCAAATTGCTGGTGTCTCTCTTTGGAGAAACCAACCAGATACATCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp CATGAAAAAGCCCAGCAGAGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGACATACCGCCACTTTTaGAGGAGTGCAGTGTTACTG +
Preference number: 5 (lower is better)
Translates to: HEKAQQSLFSCHDNVVSRTYRHF*RSAVLL
Trigger: CAGTAACACTGCACTCCTCAAAAAGTGGCGGTATGT...CCTTGATACAACATTGTCATGACATGAGAAGAGACTCTGCTGGGCTTTTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCACATACCGCCACTTTTaGAGGAGTGCAGTGTTACTG +
Preference number: 5 (lower is better)
Translates to: WSWEETDVQCTLLYSIFITYRHF*RSAVLL
Trigger: CAGTAACACTGCACTCCTCAAAAAGTGGCGGTATGT...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp CACCAGAAAGAACCATGGCTGATACAAACAGCCATCCCTATATTAACTTGTGAACTGGCTTTTCCCACCTaGTGCACTGTTATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HQKEPWLIQTAIPILTCELAFPT*CTVIFR
Trigger: CCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAG...TTCACAAGTTAATATAGGGATGGCTGTTTGTATCAGCCATGGTTCTTTCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TTAGCTTTGACTAATCTGGACTTACCACCTAAGTCATCTGGGAGAAGGATGCACTCTCTCTTCTTAAATTaGTCCCAGACCTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: LALTNLDLPPKSSGRRMHSLFLN*SQTLHQ
Trigger: CTGGTGCAAGGTCTGGGACAAATTTAAGAAGAGAGA...GTGCATCCTTCTCCCAGATGACTTAGGTGGTAAGTCCAGATTAGTCAAAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACATTGTGTCTAATTCATTaGTCGCGGACCTGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTLCLIH*SRTWRS
Trigger: ACTGCGCCAGGTCCGCGACAAATGAATTAGACACAA...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp CATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGCACATCAGTTTCTCAATGTGTTTTGTaGTTGTGGAATAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: HQESWKHTGQVSCEGTSVSQCVL*LWNRSS
Trigger: GGAGCTTCTATTCCACAACAACAAAACACATTGAGA...AACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTATCTACACTTACTGTTTaGTTGTTGTGGAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLSTLTV*LLWNRS
Trigger: GCTTCTATTCCACAACAACAAAACAGTAAGTGTAGA...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAGTAAGATGTGACTTCTaGCTGAAATTACTCCCATTT +
Preference number: 5 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLVRCDF*LKLLPF
Trigger: AAATGGGAGTAATTTCAGCAAGAAGTCACATCTTAC...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAAATTTGTCCCAGACCTaGCACCAGCACACAGACTCC +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQANLSQT*HQHTDS
Trigger: GGAGTCTGTGTGCTGGTGCAAGGTCTGGGACAAATT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp ATCATACTGCCTGACCCTGGAGCTCAGAAGAAACATCAAGAATCCTGGAAACACCAATGTGTTTTGTTGTaGTGGAATAGAAGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: IILPDPGAQKKHQESWKHQCVLL*WNRSSQ
Trigger: TTGGGAGCTTCTATTCCACAACAACAAAACACATTG...GTGTTTCCAGGATTCTTGATGTTTCTTCTGAGCTCCAGGGTCAGGCAGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp CATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTGAAGGCACATCAGTTAGTTCTCAATGTGTTTaGTTGTTGTGGAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: HQESWKHTGQVSCEGTSVSSQCV*LLWNRS
Trigger: GCTTCTATTCCACAACAACAAAACACATTGAGAACT...AACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp GTGTTTCACTGTCCCTTGTTTCTGGCCCACACCACTGTAATCAGTCTGCCATTAAAAAACACTATGGGTTaGTCAAAATTCCTTGTAGGG +
Preference number: 5 (lower is better)
Translates to: VFHCPLFLAHTTVISLPLKNTMG*SKFLVG
Trigger: CCCTACAAGGAATTTTGACAAACCCATAGTGTTTTT...TAATGGCAGACTGATTACAGTGGTGTGGGCCAGAAACAAGGGACAGTGAAACAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS TCA 90 bp GAAGAAACATCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTaGAGGCACATCAGTTCTCAATGTGTTTTGTTGTTGTGGAATAGA +
Preference number: 5 (lower is better)
Translates to: EETSRILETHGPSFL*RHISSQCVLLLWNR
Trigger: TCTATTCCACAACAACAAAACACATTGAGAACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGATGTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCACTGGGTGGCACTGGCTaGGGAATCCTTTTTCTAATA +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQALGGTG*GILFLI
Trigger: TATTAGAAAAAGGATTCCCAAGCCAGTGCCACCCAG...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357328.8
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp CATGAAAAAGCCCAGCAGAGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGCTCACGGAAATATTTTaGGCTTCTTTCTTGAAGACG +
Preference number: 5 (lower is better)
Translates to: HEKAQQSLFSCHDNVVSRLTEIF*ASFLKT
Trigger: CGTCTTCAAGAAAGAAGCCAAAAATATTTCCGTGAG...CCTTGATACAACATTGTCATGACATGAGAAGAGACTCTGCTGGGCTTTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTTTCCCAAACATCTCATaGCTCCCAAGTTCACCCCAA +
Preference number: 5 (lower is better)
Translates to: FQREFTYANRKAEQTETLFPNIS*LPSSPQ
Trigger: TTGGGGTGAACTTGGGAGCAATGAGATGTTTGGGAA...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACAACACTTACTGTTTTGTaGTTGTGGAATAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTTLTVL*LWNRSS
Trigger: GGAGCTTCTATTCCACAACAACAAAACAGTAAGTGT...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp TGGAGCTGGGAAGAGACAGATGTGCAGTGCACACTATTATACAGTATTTTCATCGACTTTTCCCAGGTTTaGTCACTCACTTTATATTCA +
Preference number: 5 (lower is better)
Translates to: WSWEETDVQCTLLYSIFIDFSQV*SLTLYS
Trigger: TGAATATAAAGTGAGTGACAAAACCTGGGAAAAGTC...GATGAAAATACTGTATAATAGTGTGCACTGCACATCTGTCTCTTCCCAGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp ATACAGAGCTGCTTACCTTACACCACATACAATAAGAAACACCACAGGGAGGTAGTAAGATGTGACTTCTaGCTGAAATTACTCCCATTT +
Preference number: 5 (lower is better)
Translates to: IQSCLPYTTYNKKHHREVVRCDF*LKLLPF
Trigger: AAATGGGAGTAATTTCAGCAAGAAGTCACATCTTAC...TACCTCCCTGTGGTGTTTCTTATTGTATGTGGTGTAAGGTAAGCAGCTCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGCTCACGGAAATATTTTaGGCTTCTTTCTTGAAGACG +
Preference number: 5 (lower is better)
Translates to: IMSASHMLKERHTCVVPKLTEIF*ASFLKT
Trigger: CGTCTTCAAGAAAGAAGCCAAAAATATTTCCGTGAG...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGCATGTCATGACAATGTaGTATCAAGGAGATCTTTCC +
Preference number: 5 (lower is better)
Translates to: IMSASHMLKERHTCVVPKHVMTM*YQGDLS
Trigger: GGAAAGATCTCCTTGATACAACATTGTCATGACATG...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACACAACTGGCTATTTATTaGGAAGAATACAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTQLAIY*EEYRAA
Trigger: AGCAGCTCTGTATTCTTCCAAATAAATAGCCAGTTG...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCATCTCTCTTCTTAAATTaGTCCCAGACCTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQASLFLN*SQTLHQ
Trigger: CTGGTGCAAGGTCTGGGACAAATTTAAGAAGAGAGA...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGGAGTTTACTTATGCTAACAAGATTCCATGTTTTGTaGTTGTGGAATAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VEGETYLCSSKGSLLMLTRFHVL*LWNRSS
Trigger: GGAGCTTCTATTCCACAACAACAAAACATGGAATCT...TGTTAGCATAAGTAAACTCCCTTTGGAACTACACAGGTATGTCTCTCCTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS-3UTR CAA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACACTATACTCAAAAGATaGGCCAAAACTTGGCTGACT +
Preference number: 5 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYTILKR*AKTWLT
Trigger: AGTCAGCCAAGTTTTGGCCAATCTTTTGAGTATAGT...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp ATAATGTCTGCTTCACACATGTTGAAGGAGAGACATACCTGTGTAGTTCCAAAGGACTTTTCCCAGGTTTaGTCACTCACTTTATATTCA +
Preference number: 5 (lower is better)
Translates to: IMSASHMLKERHTCVVPKDFSQV*SLTLYS
Trigger: TGAATATAAAGTGAGTGACAAAACCTGGGAAAAGTC...CTTTGGAACTACACAGGTATGTCTCTCCTTCAACATGTGTGAAGCAGACATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GCAGAACTAGTGTTACATAGACCGTGCCCAAACAGATACACAATGAAAAATCAACATGTCATGACAATGTaGTATCAAGGAGATCTTTCC +
Preference number: 5 (lower is better)
Translates to: AELVLHRPCPNRYTMKNQHVMTM*YQGDLS
Trigger: GGAAAGATCTCCTTGATACAACATTGTCATGACATG...TTGATTTTTCATTGTGTATCTGTTTGGGCACGGTCTATGTAACACTAGTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACTACCATGTCATGACAATGTaGTATCAAGGAGATCTTTCC +
Preference number: 5 (lower is better)
Translates to: SSHVMTMLYQGDLSQKYYHVMTM*YQGDLS
Trigger: GGAAAGATCTCCTTGATACAACATTGTCATGACATG...GTAGTACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp AGTCTCTTCTCATGTCATGACAATGTTGTATCAAGGAGATCTTTCCCAGAAGTACCCAAATTGAAAGTTTaGCTTCCTCTATCTCCATTT +
Preference number: 5 (lower is better)
Translates to: SLFSCHDNVVSRRSFPEVPKLKV*LPLSPF
Trigger: AAATGGAGATAGAGGAAGCAAAACTTTCAATTTGGG...TACTTCTGGGAAAGATCTCCTTGATACAACATTGTCATGACATGAGAAGAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAATGTGCTGTAAATATTaGACAGCAGGTTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAMCCKY*TAGSLR
Trigger: TCTCAGAGAACCTGCTGTCAAATATTTACAGCACAT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp TTCCAAAGGGAGTTTACTTATGCTAACAGGAAAGCAGAACAAACAGAAACACTTCAACTGGCTATTTATTaGGAAGAATACAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: FQREFTYANRKAEQTETLQLAIY*EEYRAA
Trigger: AGCAGCTCTGTATTCTTCCAAATAAATAGCCAGTTG...AAGTGTTTCTGTTTGTTCTGCTTTCCTGTTAGCATAAGTAAACTCCCTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357328.8
ENST00000395867.8
ENST00000611278.4
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCATTCCATGTTTTGTTGTaGTGGAATAGAAGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAFHVLL*WNRSSQ
Trigger: TTGGGAGCTTCTATTCCACAACAACAAAACATGGAA...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374648.7
ENST00000611278.4
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCAAGATTCCATGTTTTGTaGTTGTGGAATAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQARFHVL*LWNRSS
Trigger: GGAGCTTCTATTCCACAACAACAAAACATGGAATCT...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374648.7
ENST00000611278.4
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCATCTACACTTACTGTTTaGTTGTTGTGGAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQASTLTV*LLWNRS
Trigger: GCTTCTATTCCACAACAACAAAACAGTAAGTGTAGA...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357328.8
ENST00000395867.8
CDS-3UTR CAA 90 bp GGGTACGTATCTTCTCCTTATGATCATGTTGAGTTCCAATATACAAATCAAGCATTCAGATTCCATGTTTaGTTGTTGTGGAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: GYVSSPYDHVEFQYTNQAFRFHV*LLWNRS
Trigger: GCTTCTATTCCACAACAACAAAACATGGAATCTGAA...TGCTTGATTTGTATATTGGAACTCAACATGATCATAAGGAGAAGATACGTACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374648.7
ENST00000611278.4
CDS CCA 72 bp CCCTTCGCTCCTGCACTCCACGGGCAGAGAGGCCCTTaGGGCCGGTGCAGGAGCCGTCTCCCTCGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: PFAPALHGQRGP*GRCRSRLPRAL
Trigger: GAGAGCCCGAGGGAGACGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCCGTGGAGTGCAGGAGCGAAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000485560.5
ENST00000611278.4
CDS CAA 72 bp CCCCTTCGCTCCTGCACTCCACGGGCAGAGAGGCCCTaGGGGCCGGTGCAGGAGCCGTCTCCCTCGGGCTCT +
Preference number: 6 (lower is better)
Translates to: PLRSCTPRAERP*GPVQEPSPSGS
Trigger: AGAGCCCGAGGGAGACGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCCGTGGAGTGCAGGAGCGAAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000485560.5
ENST00000611278.4
CDS CAA 90 bp CTAGGCCAGCCCCTTCGCTCCTGCACTCCACGGGCAGAGAGGCCCTaGGGGCCGGTGCAGGAGCCGTCTCCCTCGGGCTCTCCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: LGQPLRSCTPRAERP*GPVQEPSPSGSPRE
Trigger: TTCCCTGGGAGAGCCCGAGGGAGACGGCTCCTGCACCGGCCCCAAGGGCCTCTCTGCCCGTGGAGTGCAGGAGCGAAGGGGCTGGCCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000485560.5
ENST00000611278.4
CDS CCA 72 bp TGCTACAGGACTTCGCTGAGCGCCAGGCGCAGGGACTaGACGCATACGGACCCCCGGGAGCCCCGGAACTCG +
Preference number: 6 (lower is better)
Translates to: CYRTSLSARRRD*THTDPREPRNS
Trigger: CGAGTTCCGGGGCTCCCGGGGGTCCGTATGCGTCCAGTCCCTGCGCCTGGCGCTCAGCGAAGTCCTGTAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395873.7
CDS TCA 72 bp GGAACTCGCGTTCCCACGCCAGACCTCATCCCCTTCTaGCAGAGACGCCCTCGTCCCACCGTCGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: GTRVPTPDLIPF*QRRPRPTVAAG
Trigger: GCCTGCGGCGACGGTGGGACGAGGGCGTCTCTGTCAGAAGGGGATGAGGTCTGGCGTGGGAACGCGAGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395873.7
CDS TCA 72 bp ATTACCAATTTAGGTTCCCGTGCTACAGGACTTCGCTaGGCGCCAGGCGCAGGGACTGGACGCATACGGACC +
Preference number: 6 (lower is better)
Translates to: ITNLGSRATGLR*APGAGTGRIRT
Trigger: GGTCCGTATGCGTCCAGTCCCTGCGCCTGGCGCTCAGCGAAGTCCTGTAGCACGGGAACCTAAATTGGTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395873.7
CDS TCA 72 bp GGAGGGGTGATAACAGCATTTCTTTCGCTGTGGCCGTaGGCCTTTCACCCGTCCCTGCCCTCAGACTCTCCA +
Preference number: 6 (lower is better)
Translates to: GGVITAFLSLWP*AFHPSLPSDSP
Trigger: TGGAGAGTCTGAGGGCAGGGACGGGTGAAAGGCTCACGGCCACAGCGAAAGAAATGCTGTTATCACCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS GCA 72 bp AGAAAGGAAGAATGTCAGGAGAGCCTTCGCCGGCCTTaGAGTTCGGAGATTCACCTGCCTATACAGGTCCAC +
Preference number: 6 (lower is better)
Translates to: RKEECQESLRRP*SSEIHLPIQVH
Trigger: GTGGACCTGTATAGGCAGGTGAATCTCCGAACTGCAAGGCCGGCGAAGGCTCTCCTGACATTCTTCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS GCA 72 bp AGAGCCTTCGCCGGCCTTGCAGTTCGGAGATTCACCTaGCTATACAGGTCCACACACAAGATACTTACGTGT +
Preference number: 6 (lower is better)
Translates to: RAFAGLAVRRFT*LYRSTHKILTC
Trigger: ACACGTAAGTATCTTGTGTGTGGACCTGTATAGGCAGGTGAATCTCCGAACTGCAAGGCCGGCGAAGGCTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS TCA 72 bp GCACACAGACTCCGACGGCTTCAGGATACTGTGCCATaGTTACACATAATACATAAGCGAACGCGAAACGTG +
Preference number: 6 (lower is better)
Translates to: AHRLRRLQDTVP*LHIIHKRTRNV
Trigger: CACGTTTCGCGTTCGCTTATGTATTATGTGTAATCATGGCACAGTATCCTGAAGCCGTCGGAGTCTGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374648.7
ENST00000395867.8
ENST00000485560.5
ENST00000611278.4
CDS TCA 72 bp CAAAATGGGCAGCAGTGGCTCGGGAAACTGCAGACTTaGCTTCTAATCTCAGTTCTGCCTCTAAGGAATGAC +
Preference number: 6 (lower is better)
Translates to: QNGQQWLGKLQT*LLISVLPLRND
Trigger: GTCATTCCTTAGAGGCAGAACTGAGATTAGAAGTCAAGTCTGCAGTTTCCCGAGCCACTGCTGCCCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS GCA 72 bp GGCAACGTCACCTCTGAGCTGGCTTTTCCCACCTTGTaGACTGTTATCTTCAGGCTAATAAGGTCTACAAAC +
Preference number: 6 (lower is better)
Translates to: GNVTSELAFPTL*TVIFRLIRSTN
Trigger: GTTTGTAGACCTTATTAGCCTGAAGATAACAGTGCACAAGGTGGGAAAAGCCAGCTCAGAGGTGACGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494133.1
CDS TCA 72 bp TCAAATAAGGTCAAAACAGATAACCCAAGTATGACCTaGCTGCACTACCATCCGGCGGGGATATCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: SNKVKTDNPSMT*LHYHPAGISGQ
Trigger: TTGGCCTGATATCCCCGCCGGATGGTAGTGCAGTCAGGTCATACTTGGGTTATCTGTTTTGACCTTATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS CCA 72 bp ACAGGTCCACACACAAGATACTTACGTGTCCATGTGTaGCTCCGATATATGCTGAGCTCAGACATGACACTT +
Preference number: 6 (lower is better)
Translates to: TGPHTRYLRVHV*LRYMLSSDMTL
Trigger: AAGTGTCATGTCTGAGCTCAGCATATATCGGAGCCACACATGGACACGTAAGTATCTTGTGTGTGGACCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS TCA 72 bp TCAAGAATCCTGGAAACACACGGGCCAAGTTTCCTGTaGAGGCACATCAGTTCTCAATGTGTTTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: SRILETHGPSFL*RHISSQCVLLL
Trigger: CAACAACAAAACACATTGAGAACTGATGTGCCTTCACAGGAAACTTGGCCCGTGTGTTTCCAGGATTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485560.5
CDS TCA 72 bp ATCTTTCAAATAAGGTCAAAACAGATAACCCAAGTATaGCCTGACTGCACTACCATCCGGCGGGGATATCAG +
Preference number: 6 (lower is better)
Translates to: IFQIRSKQITQV*PDCTTIRRGYQ
Trigger: CTGATATCCCCGCCGGATGGTAGTGCAGTCAGGTCATACTTGGGTTATCTGTTTTGACCTTATTTGAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611278.4
CDS CCA 72 bp ATCCGTAATTTACAGAGAGGAAAACCGAGTCTCCCGTaGATAATTGTGTCTAATTCATTTGTCGCGGACCTG +
Preference number: 6 (lower is better)
Translates to: IRNLQRGKPSLP*IIVSNSFVADL
Trigger: CAGGTCCGCGACAAATGAATTAGACACAATTATCCACGGGAGACTCGGTTTTCCTCTCTGTAAATTACGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395867.8
ENST00000611278.4
CDS TCA 72 bp CTAATCTCAGTTCTGCCTCTAAGGAATGACAAGATCTaGACTACTCACCTCCTCAAACTCAATTTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: LISVLPLRNDKI*TTHLLKLNFVF
Trigger: AAAAACAAAATTGAGTTTGAGGAGGTGAGTAGTTCAGATCTTGTCATTCCTTAGAGGCAGAACTGAGATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611278.4