RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF24 (Homo sapiens)

Ensembl gene IDs: ENSG00000172466

Ensembl transcript IDs: ENST00000261332.11, ENST00000399061.3, ENST00000589539.1, ENST00000589881.5, ENST00000590140.1, ENST00000593130.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTAAGTTATATACCCATTCTTTTATCACTGTGGCTAGGAAGCTGTaGGACTCAGGAGGCCAGGCCTGGTCACATGCTCACCTAAGCCAC +
Preference number: 1 (lower is better)
Translates to: LKLYTHSFITVARKL*DSGGQAWSHAHLSH
Trigger: GTGGCTTAGGTGAGCATGTGACCAGGCCTGGCCTCCTGAGTCCCACAGCTTCCTAGCCACAGTGATAAAAGAATGGGTATATAACTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR TCA 90 bp TTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTaGACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGAGTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: FTNFQIVVRVSWTHL*TLESQLALLSRVLL
Trigger: GAGGAGGACTCGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR GCA 90 bp AGAGTGCCAGGAACTTCATGGGATTCTAATGCTGAAGGAAGCTCCTaGTTTGGAGCTAGTGCTCCATTTTCAGTCCTACCATCATCATCT +
Preference number: 1 (lower is better)
Translates to: RVPGTSWDSNAEGSS*FGASAPFSVLPSSS
Trigger: AGATGATGATGGTAGGACTGAAAATGGAGCACTAGCTCCAAAGCAGGAGCTTCCTTCAGCATTAGAATCCCATGAAGTTCCTGGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR CCA 90 bp TCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTaGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTT +
Preference number: 1 (lower is better)
Translates to: SLHMAQIQAYMVLGS*DLHKAFFPVVPAEV
Trigger: AACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 90 bp AGTGAGGCTTGGAGACTTGAAAAACAGAGGAGCGTGAAGATTAAGTaGAGACAAACGGCACACAGGAAACAGAAATTCCCAAGTGTGGAA +
Preference number: 1 (lower is better)
Translates to: SEAWRLEKQRSVKIK*RQTAHRKQKFPSVE
Trigger: TTCCACACTTGGGAATTTCTGTTTCCTGTGTGCCGTTTGTCTCCACTTAATCTTCACGCTCCTCTGTTTTTCAAGTCTCCAAGCCTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR TCA 90 bp CATGACATAATAGCCATTGAGAGGTTGCTCCCTTCTTACCTACTCTaGTACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCAC +
Preference number: 1 (lower is better)
Translates to: HDIIAIERLLPSYLL*YKNSVIPAVFQICH
Trigger: GTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTATTATGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 90 bp TCGTACGGAAAGGTGACTAGAGGATGTATGTTAAACTGTGGTAAGTaGAATGTGATTGGTAGCATTGGAGAAAAGGGTCTCTCTATTCAA +
Preference number: 1 (lower is better)
Translates to: SYGKVTRGCMLNCGK*NVIGSIGEKGLSIQ
Trigger: TTGAATAGAGAGACCCTTTTCTCCAATGCTACCAATCACATTCCACTTACCACAGTTTAACATACATCCTCTAGTCACCTTTCCGTACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 90 bp GAAGAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTaGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAGC +
Preference number: 1 (lower is better)
Translates to: EEANSHKTANPYDLQ*KKYLPTYGRITVPS
Trigger: GCTAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGGGCGATGCCACTGCTTaGCACTGCCATATCACCACT +
Preference number: 2 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPGDATA*HCHITT
Trigger: AGTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCC...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTACAGGTGACCTCCCCTaGGGAATGCTCAGACAAGGG +
Preference number: 2 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTTGDLP*GMLRQG
Trigger: CCCTTGTCTGAGCATTCCTCAGGGGAGGTCACCTGT...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCACCTCCCCTGAGGAATaGTCAGACAAGGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGITSPEE*SDKGKR
Trigger: CCTCTTCCCCTTGTCTGAGCATTCCTCAGGGGAGGT...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGGGCTGAAGATAAGCTaGGGGCCTCCTGTGTTAACC +
Preference number: 2 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTGLKIS*GPPVLT
Trigger: GGTTAACACAGGAGGCCCCCAGCTTATCTTCAGCCC...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGAGCTTTATTGGACACTaGCTTGTTTCCCCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPSFIGH*LVSPQP
Trigger: TGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCT...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATTCGTGGACTCACCTCTaGACACTGGAGAGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSWTHL*TLESQL
Trigger: TAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGA...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATACAGACTCTCTCCACATaGCACAAATTCAGGCTTACA +
Preference number: 2 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIQTLST*HKFRLT
Trigger: TGTAAGCCTGAATTTGTGCCATGTGGAGAGAGTCTG...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGTGGGAACCTCACAGGTaGCCTCCCCTGAGGAATGCT +
Preference number: 2 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKWEPHR*PPLRNA
Trigger: AGCATTCCTCAGGGGAGGTCACCTGTGAGGTTCCCA...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATACCTTATGTTTACATTTaGCTTCAACACTGCCATCCG +
Preference number: 2 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIPYVYI*LQHCHP
Trigger: CGGATGGCAGTGTTGAAGGCAAATGTAAACATAAGG...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCACAGTACCTAGCACAGTaGCTTGTCGGTAGAAAATGT +
Preference number: 2 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPQYLAQ*LVGRKC
Trigger: ACATTTTCTACCGACAAGGCACTGTGCTAGGTACTG...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATACGGTGTCTAAGCCAATaGCTAGCATGCAGATTATTT +
Preference number: 2 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIRCLSQ*LACRLF
Trigger: AAATAATCTGCATGCTAGGCATTGGCTTAGACACCG...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTGTGGCTAGGAAGCTGTaGGACTCAGGAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILVARKL*DSGGQA
Trigger: GGCCTGGCCTCCTGAGTCCCACAGCTTCCTAGCCAC...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCCACCCATGGCATGGTaGATATGTCCCTGGAGTCTA +
Preference number: 2 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRPPMAW*ICPWSL
Trigger: TAGACTCCAGGGACATATTCACCATGCCATGGGTGG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATATCTCCATACACTTGGTaGAAATACAGTTATGAAGGC +
Preference number: 2 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQISPYTW*KYSYEG
Trigger: GCCTTCATAACTGTATTTTCACCAAGTGTATGGAGA...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGTCCACCAGCTGGCCTTaGATTTATTACTATGCTTTT +
Preference number: 2 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPSTSWP*IYYYAF
Trigger: AAAAGCATAGTAATAAATGCAAGGCCAGCTGGTGGA...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACGCCGTCTTCCAAATATaGCACCTGAAAACCTACTTG +
Preference number: 2 (lower is better)
Translates to: LLTKQILWRCHCLALPYHAVFQI*HLKTYL
Trigger: CAAGTAGGTTTTCAGGTGGCATATTTGGAAGACGGC...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGCTCTGGCGATGCCACTaGTTGGCACTGCCATATCAC +
Preference number: 2 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKLWRCH*LALPYH
Trigger: GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAG...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGCAGATACTCTGGCGATaGCACTGCTTGGCACTGCCA +
Preference number: 2 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKQILWR*HCLALP
Trigger: TGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTG...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGTGCCAGGAACTTCATaGGATTCTAATGCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTVPGTS*DSNAEG
Trigger: TCCTTCAGCATTAGAATCCCATGAAGTTCCTGGCAC...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCCACATGCAAGTCACATaGTCTCTGAATCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIHMQVT*SLNLAF
Trigger: GAAAGCAAGATTCAGAGATCATGTGACTTGCATGTG...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAGTGAAACGTGTCCAATaGAAGAAAAGCCTGAATTAC +
Preference number: 2 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPVKRVQ*KKSLNY
Trigger: GTAATTCAGGCTTTTCTTTCATTGGACACGTTTCAC...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAATTTCTAAGCCTCAGTaGAACGTGTCCAATGAAAGA +
Preference number: 2 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPISKPQ*NVSNER
Trigger: TCTTTCATTGGACACGTTTCACTGAGGCTTAGAAAT...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR GCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAACCTCCCCTGAGGAATaGTCAGACAAGGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVTSPEE*SDKGKR
Trigger: CCTCTTCCCCTTGTCTGAGCATTCCTCAGGGGAGGT...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGATGATCTCTGAATCTTaGTTTCCTAGTCCACAAATC +
Preference number: 2 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPMISES*FPSPQI
Trigger: GATTTGTGGACTAGGAAAGCAAGATTCAGAGATCAT...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCATTCTTTTATCACTGTaGCTAGGAAGCTGTGGGACT +
Preference number: 2 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIILLSL*LGSCGT
Trigger: AGTCCCACAGCTTCCTAGCCACAGTGATAAAAGAAT...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATAGCGTGAAGATTAAGTaGAGACAAACGGCACACAGG +
Preference number: 2 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSVKIK*RQTAHR
Trigger: CCTGTGTGCCGTTTGTCTCCACTTAATCTTCACGCT...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTTCGTGGACTCACCTCTaGACACTGGAGAGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: LAKIFKDSGLADYRQTGISWTHL*TLESQL
Trigger: TAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGA...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGAGCTTTATTGGACACTaGCTTGTTTCCCCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRSFIGH*LVSPQP
Trigger: TGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCT...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCCTCAGAATCCTTTCTaGACAATGCAGATATTAGAG +
Preference number: 2 (lower is better)
Translates to: LLTKQILWRCHCLALPYHPQNPF*TMQILE
Trigger: CTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGG...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACCTGTCCCCTCAGATGTaGAGAAAACCTGCTCAGACC +
Preference number: 2 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNLSPQM*RKPAQT
Trigger: GGTCTGAGCAGGTTTTCTTCACATCTGAGGGGACAG...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTAGAACACAGGAGTCTTaGCAAGAAGGGGCTGAAGAT +
Preference number: 2 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPRTQES*QEGAED
Trigger: ATCTTCAGCCCCTTCTTGTCAAGACTCCTGTGTTCT...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAGAGGAACACCCATATTaGGAGTGCCAGGAACTTCAT +
Preference number: 2 (lower is better)
Translates to: RSLQLYWTLTCFPSATKREEHPY*ECQELH
Trigger: ATGAAGTTCCTGGCACTCTCAATATGGGTGTTCCTC...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR GCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATGCCGTCTTCCAAATATaGCACCTGAAAACCTACTTG +
Preference number: 2 (lower is better)
Translates to: STSNSACHSNHRCQLLTHAVFQI*HLKTYL
Trigger: CAAGTAGGTTTTCAGGTGGCATATTTGGAAGACGGC...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTCTCTGGCGATGCCACTaGTTGGCACTGCCATATCAC +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILLWRCH*LALPYH
Trigger: GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAG...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCAGATACTCTGGCGATaGCACTGCTTGGCACTGCCA +
Preference number: 2 (lower is better)
Translates to: LAKIFKDSGLADYRQTGIQILWR*HCLALP
Trigger: TGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTG...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGACCAAACAGATACTCTaGCGATGCCACTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKTKQIL*RCHCLA
Trigger: TGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGT...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAAATAGCCACCACCCATaGCATGGTGAATATGTCCCT +
Preference number: 2 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRNSHHP*HGEYVP
Trigger: AGGGACATATTCACCATGCCATGGGTGGTGGCTATT...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATACAGGTGACCTCCCCTaGGGAATGCTCAGACAAGGG +
Preference number: 2 (lower is better)
Translates to: DQSICISSPIKVFHSLFDTGDLP*GMLRQG
Trigger: CCCTTGTCTGAGCATTCCTCAGGGGAGGTCACCTGT...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATTGGGAACCTCACAGGTaGCCTCCCCTGAGGAATGCT +
Preference number: 2 (lower is better)
Translates to: DQSICISSPIKVFHSLFDWEPHR*PPLRNA
Trigger: AGCATTCCTCAGGGGAGGTCACCTGTGAGGTTCCCA...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCATGCACAAAGACATCTaGATAGGATGTTTACTTTGG +
Preference number: 2 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIMHKDI*IGCLLW
Trigger: CCAAAGTAAACATCCTATTCAGATGTCTTTGTGCAT...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTAAACAAGCTCCATTCTaGCTCACTTTTCCACCAGCT +
Preference number: 2 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPKQAPF*LTFPPA
Trigger: AGCTGGTGGAAAAGTGAGGCAGAATGGAGCTTGTTT...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATCTCTGGCGATGCCACTaGTTGGCACTGCCATATCAC +
Preference number: 2 (lower is better)
Translates to: IFKDSGLADYRQTGILTNLWRCH*LALPYH
Trigger: GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAG...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCAGACTCTCTCCACATaGCACAAATTCAGGCTTACA +
Preference number: 2 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRQTLST*HKFRLT
Trigger: TGTAAGCCTGAATTTGTGCCATGTGGAGAGAGTCTG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACTCAGACCTCATTCAGTaGCATACCAGCACCATCTCC +
Preference number: 2 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNSDLIQ*HTSTIS
Trigger: GGAGATGGTGCTGGTATGCCACTGAATGAGGTCTGA...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATCAAACGAAATTATCATaGCTTCTCGGTAACACTGTG +
Preference number: 2 (lower is better)
Translates to: STSNSACHSNHRCQLLTHQTKLS*LLGNTV
Trigger: CACAGTGTTACCGAGAAGTCATGATAATTTCGTTTG...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAACCTCCCCTGAGGAATaGTCAGACAAGGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLTSPEE*SDKGKR
Trigger: CCTCTTCCCCTTGTCTGAGCATTCCTCAGGGGAGGT...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTGCCACTGCTTGGCACTaGCATATCACCACTTCATCA +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILATAWH*HITTSS
Trigger: TGATGAAGTGGTGATATGGCAGTGCCAAGCAGTGGC...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTGTTTCTAGGCAGGTATaGCACCATTTCTTTCAAGAT +
Preference number: 2 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPVSRQV*HHFFQD
Trigger: ATCTTGAAAGAAATGGTGTCATACCTGCCTAGAAAC...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCAGGATGAGTAGCTTTTaGATTTTCCTGCAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: TYSDTRILSFQPSSKYATRMSSF*IFLQAK
Trigger: TTTTGCCTGCAGGAAAATTCAAAAGCTACTCATCCT...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAAAAAACAGAGGAGCGTaGAGATTAAGTGGAGACAAA +
Preference number: 2 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRKNRGA*RLSGDK
Trigger: TTTGTCTCCACTTAATCTTCACGCTCCTCTGTTTTT...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGTGGCTATTTCTGAAATaGACAAGCCAAGTCAGGTCA +
Preference number: 2 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKWLFLK*TSQVRS
Trigger: TGACCTGACTTGGCTTGTTCATTTCAGAAATAGCCA...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR GCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGCCTTATGTTTACATTTaGCTTCAACACTGCCATCCG +
Preference number: 2 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKPYVYI*LQHCHP
Trigger: CGGATGGCAGTGTTGAAGGCAAATGTAAACATAAGG...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGATCCACCAGCTGGCCTTaGATTTATTACTATGCTTTT +
Preference number: 2 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRSTSWP*IYYYAF
Trigger: AAAAGCATAGTAATAAATGCAAGGCCAGCTGGTGGA...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAGCTGAAGGAAGCTCCTaGTTTGGAGCTAGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLAEGSS*FGASAP
Trigger: TGGAGCACTAGCTCCAAAGCAGGAGCTTCCTTCAGC...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATCCCTATGATTTACAGTaGAAGAAATACCTACCTACT +
Preference number: 2 (lower is better)
Translates to: STSNSACHSNHRCQLLTHPYDLQ*KKYLPT
Trigger: AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGG...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGGCAGCTTCTCCCATGTaGTATTTGTCATGGTACTTA +
Preference number: 2 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKAASPM*YLSWYL
Trigger: TAAGTACCATGACAAATACCACATGGGAGAAGCTGC...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGAGGATGAGTAGCTTTTaGATTTTCCTGCAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKRMSSF*IFLQAK
Trigger: TTTTGCCTGCAGGAAAATTCAAAAGCTACTCATCCT...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACATGAAGAATAAGGGCTaGGCCCTGACTGAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: EANSHKTANPYDLQWKKYMKNKG*ALTEVF
Trigger: AAACACTTCAGTCAGGGCTCAGCCCTTATTCTTCAT...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR GCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTATTTGCCTTCAACACTaGCATCCGCTACAAATTTTT +
Preference number: 2 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPICLQH*HPLQIF
Trigger: AAAAATTTGTAGCGGATGGCAGTGTTGAAGGCAAAT...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCATTTGCCTTCAACACTaGCATCCGCTACAAATTTTT +
Preference number: 2 (lower is better)
Translates to: TYSDTRILSFQPSSKYATICLQH*HPLQIF
Trigger: AAAAATTTGTAGCGGATGGCAGTGTTGAAGGCAAAT...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTTTTCCCACAGAGCTTTaGCTTAGCCTCAGAATCCTT +
Preference number: 2 (lower is better)
Translates to: LAKIFKDSGLADYRQTGIFPTEL*LSLRIL
Trigger: AAGGATTCTGAGGCTAAGGCAAAGCTCTGTGGGAAA...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACGATGTGAAGAAAACCTaGTCAGACCTCATTCAGTGG +
Preference number: 2 (lower is better)
Translates to: EANSHKTANPYDLQWKKYDVKKT*SDLIQW
Trigger: CCACTGAATGAGGTCTGAGCAGGTTTTCTTCACATC...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR GCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATTGGACTCTCTGGTGTTaGACAAGAATGGAACTTCGG +
Preference number: 2 (lower is better)
Translates to: IFKDSGLADYRQTGILTNWTLWC*TRMELR
Trigger: CCGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCA...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCCCTATGATTTACAGTaGAAGAAATACCTACCTACT +
Preference number: 2 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRPYDLQ*KKYLPT
Trigger: AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAACCAAACAGATACTCTaGCGATGCCACTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLTKQIL*RCHCLA
Trigger: TGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGT...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTACCAGCAAATGCTCAGTaGCTACTGGGCAGATATCAG +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLPANAQ*LLGRYQ
Trigger: CTGATATCTGCCCAGTAGCCACTGAGCATTTGCTGG...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAAATTCAGGCTTACATaGTCCTTGGTTCCTGGGATC +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILKFRLT*SLVPGI
Trigger: GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTT...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTCCTGAATTACCAACATaGGTTAGCATCACTCACACG +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILPELPT*VSITHT
Trigger: CGTGTGAGTGATGCTAACCCATGTTGGTAATTCAGG...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGAACAGCAAACCCCTATaGTTTACAGTGGAAGAAATA +
Preference number: 2 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKNSKPL*FTVEEI
Trigger: TATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTT...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGCAGATGATGAGAAGTTaGAAATATCAGCCCCATATA +
Preference number: 2 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKQMMRS*KYQPHI
Trigger: TATATGGGGCTGATATTTTCAACTTCTCATCATCTG...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR GCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTCAGTACCTAGCACAGTaGCTTGTCGGTAGAAAATGT +
Preference number: 2 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTQYLAQ*LVGRKC
Trigger: ACATTTTCTACCGACAAGGCACTGTGCTAGGTACTG...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACAGTACCTAGCACAGTaGCTTGTCGGTAGAAAATGT +
Preference number: 2 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLQYLAQ*LVGRKC
Trigger: ACATTTTCTACCGACAAGGCACTGTGCTAGGTACTG...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAGACAAAAACAGTATTTaGCAACCCTCATACTACTTT +
Preference number: 2 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRDKNSI*QPSYYF
Trigger: AAAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTC...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCGGTGTCTAAGCCAATaGCTAGCATGCAGATTATTT +
Preference number: 2 (lower is better)
Translates to: EANSHKTANPYDLQWKKYRCLSQ*LACRLF
Trigger: AAATAATCTGCATGCTAGGCATTGGCTTAGACACCG...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTTCTTTCTTTCAAACCTaGCCTTGGGGAAACAGGTTT +
Preference number: 2 (lower is better)
Translates to: LAKIFKDSGLADYRQTGISFFQT*PWGNRF
Trigger: AAACCTGTTTCCCCAAGGGCAGGTTTGAAAGAAAGA...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTATTTCAAACCTGCCCTTaGGGAAACAGGTTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLFQTCP*GNRFLH
Trigger: ATGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAA...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR TCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTGTTTCTAGGCAGGTATaGCACCATTTCTTTCAAGAT +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILVSRQV*HHFFQD
Trigger: ATCTTGAAAGAAATGGTGTCATACCTGCCTAGAAAC...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACGTTTCTAGGCAGGTATaGCACCATTTCTTTCAAGAT +
Preference number: 2 (lower is better)
Translates to: EANSHKTANPYDLQWKKYVSRQV*HHFFQD
Trigger: ATCTTGAAAGAAATGGTGTCATACCTGCCTAGAAAC...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACAACAGCAAACCCCTATaGTTTACAGTGGAAGAAATA +
Preference number: 2 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNNSKPL*FTVEEI
Trigger: TATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCAAACGAAATTATCATaGCTTCTCGGTAACACTGTG +
Preference number: 2 (lower is better)
Translates to: LAKIFKDSGLADYRQTGIQTKLS*LLGNTV
Trigger: CACAGTGTTACCGAGAAGTCATGATAATTTCGTTTG...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTTCTCCATACACTTGGTaGAAATACAGTTATGAAGGC +
Preference number: 2 (lower is better)
Translates to: LAKIFKDSGLADYRQTGISPYTW*KYSYEG
Trigger: GCCTTCATAACTGTATTTTCACCAAGTGTATGGAGA...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGGACAAAAACAGTATTTaGCAACCCTCATACTACTTT +
Preference number: 2 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKDKNSI*QPSYYF
Trigger: AAAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTC...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACCTTCTCAAACTTTATTaGACAGAAGAATGTCCCATG +
Preference number: 2 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNLLKLY*TEECPM
Trigger: CATGGGACATTCTTCTGTGCAATAAAGTTTGAGAAG...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAGTTTACAGCTTTATTaGACACTGACTTGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILSLQLY*TLTCFP
Trigger: GGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACT...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAACAGCAAACCCCTATaGTTTACAGTGGAAGAAATA +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILNSKPL*FTVEEI
Trigger: TATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTT...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTATTTGCCTTCAACACTaGCATCCGCTACAAATTTTT +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILICLQH*HPLQIF
Trigger: AAAAATTTGTAGCGGATGGCAGTGTTGAAGGCAAAT...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATTCCACCAGCTGGCCTTaGATTTATTACTATGCTTTT +
Preference number: 2 (lower is better)
Translates to: IFKDSGLADYRQTGILTNSTSWP*IYYYAF
Trigger: AAAAGCATAGTAATAAATGCAAGGCCAGCTGGTGGA...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTACGGTGTCTAAGCCAATaGCTAGCATGCAGATTATTT +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLRCLSQ*LACRLF
Trigger: AAATAATCTGCATGCTAGGCATTGGCTTAGACACCG...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATTATAGGGTTAGCAACTaGCTTCAGCGAAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: DQSICISSPIKVFHSLFDYRVSN*LQRRGK
Trigger: TTTTCCTCTTCGCTGAAGGCAGTTGCTAACCCTATA...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCCCTATGATTTACAGTaGAAGAAATACCTACCTACT +
Preference number: 2 (lower is better)
Translates to: EANSHKTANPYDLQWKKYPYDLQ*KKYLPT
Trigger: AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGG...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTGTAGTGCATGTGAAATaGGGTTATGTCCTACTTTAT +
Preference number: 2 (lower is better)
Translates to: AKIFKDSGLADYRQTGILVVHVK*GYVLLY
Trigger: ATAAAGTAGGACATAACCCCATTTCACATGCACTAC...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CAA 90 bp CCAACCCTCATACTACTTTTTCTACACTCACATTACCAAATATCTTaGGCATTTATGACAAATCTACCACAGGGAAGCTTCCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: PTLILLFLHSHYQIS*AFMTNLPQGSFLVY
Trigger: ATATACAAGGAAGCTTCCCTGTGGTAGATTTGTCATAAATGCCAAAGATATTTGGTAATGTGAGTGTAGAAAAAGTAGTATGAGGGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATTCCAAATATGCCACCTaGAAACCTACTTGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: DQSICISSPIKVFHSLFDSKYAT*KPTWKE
Trigger: TTCTTTCCAAGTAGGTTTTCAGGTGGCATATTTGGA...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTACCTCAGAATCCTTTCTaGACAATGCAGATATTAGAG +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLPQNPF*TMQILE
Trigger: CTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGG...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR GCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAAGCCAATGCCTAGCATaGAGATTATTTCAGTACATG +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLSQCLA*RLFQYM
Trigger: CATGTACTGAAATAATCTGCATGCTAGGCATTGGCT...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATCCTTCTTACCTACTCTaGTACAAGAATTCTGTCATT +
Preference number: 2 (lower is better)
Translates to: DQSICISSPIKVFHSLFDPSYLL*YKNSVI
Trigger: AATGACAGAATTCTTGTATCAGAGTAGGTAAGAAGG...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR TCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAAATAAGGAACGCAGGTaGAAAGTCACTCTAAAATTC +
Preference number: 2 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLNKERR*KVTLKF
Trigger: GAATTTTAGAGTGACTTTTCACCTGCGTTCCTTATT...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTATAGTCAAAATGATGTaGCTAGGTATGGATGAAACT +
Preference number: 2 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGIVKMM*LGMDET
Trigger: AGTTTCATCCATACCTAGCCACATCATTTTGACTAT...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CAA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATAAGCCAGCTAGCTCTTTaGAGCCGAGTCCTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQISQLAL*SRVLLP
Trigger: GGGGAGGAGGACTCGGCTCAAAAGAGCTAGCTGGCT...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR GCA 72 bp CTGGCTGGCACTGTCCCCTCAGATGTGAAGAAAACCTaGTCAGACCTCATTCAGTGGCATACCAGCACCATC +
Preference number: 3 (lower is better)
Translates to: LAGTVPSDVKKT*SDLIQWHTSTI
Trigger: GATGGTGCTGGTATGCCACTGAATGAGGTCTGAGCAGGTTTTCTTCACATCTGAGGGGACAGTGCCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR GCA 72 bp CCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTaGCATATCACCACTTCATCAGAAGCTAGGCACTCC +
Preference number: 3 (lower is better)
Translates to: PNRYSGDATAWH*HITTSSEARHS
Trigger: GGAGTGCCTAGCTTCTGATGAAGTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp TATACCCATTCTTTTATCACTGTGGCTAGGAAGCTGTaGGACTCAGGAGGCCAGGCCTGGTCACATGCTCAC +
Preference number: 3 (lower is better)
Translates to: YTHSFITVARKL*DSGGQAWSHAH
Trigger: GTGAGCATGTGACCAGGCCTGGCCTCCTGAGTCCCACAGCTTCCTAGCCACAGTGATAAAAGAATGGGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATAAAGGAAGCTCCTGCTTaGGAGCTAGTGCTCCATTTT +
Preference number: 3 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIKEAPA*ELVLHF
Trigger: AAAATGGAGCACTAGCTCCAAAGCAGGAGCTTCCTT...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CAA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAGTGGACTCTCTGGTGTaGCACAAGAATGGAACTTCG +
Preference number: 3 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPVDSLV*HKNGTS
Trigger: CGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCAC...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CAA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGTTATTGGACACTGACTaGTTTCCCCTCAGCCACAAA +
Preference number: 3 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPLLDTD*FPLSHK
Trigger: TTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAA...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAATAGCCATTGAGAGGTaGCTCCCTTCTTACCTACTC +
Preference number: 3 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPIAIER*LPSYLL
Trigger: GAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTAT...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGCATCATTTCCTCTTCTaGTGTGCCACCATCCAGTTT +
Preference number: 3 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPHHFLF*CATIQF
Trigger: AAACTGGATGGTGGCACACAAGAAGAGGAAATGATG...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp CCTGGCTTAAGTTATATACCCATTCTTTTATCACTGTaGCTAGGAAGCTGTGGGACTCAGGAGGCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: PGLSYIPILLSL*LGSCGTQEARP
Trigger: AGGCCTGGCCTCCTGAGTCCCACAGCTTCCTAGCCACAGTGATAAAAGAATGGGTATATAACTTAAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp GCATCCGAGTTTCTCCTCAGACAGACTCTCTCCACATaGCACAAATTCAGGCTTACATGGTCCTTGGTTCCT +
Preference number: 3 (lower is better)
Translates to: ASEFLLRQTLST*HKFRLTWSLVP
Trigger: AGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGTCTGTCTGAGGAGAAACTCGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACATAGCCATTGAGAGGTaGCTCCCTTCTTACCTACTC +
Preference number: 3 (lower is better)
Translates to: LLTKQILWRCHCLALPYHIAIER*LPSYLL
Trigger: GAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTAT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCCACAGGGAAGCTTCCTaGTATATAGGAACCGCATAC +
Preference number: 3 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIHREAS*YIGTAY
Trigger: GTATGCGGTTCCTATATACAAGGAAGCTTCCCTGTG...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR TCA 72 bp TTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTaGACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGA +
Preference number: 3 (lower is better)
Translates to: FQIVVRVSWTHL*TLESQLALLSR
Trigger: TCGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp CAGACTCTCTCCACATGGCACAAATTCAGGCTTACATaGTCCTTGGTTCCTGGGATCTCCATAAAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: QTLSTWHKFRLT*SLVPGISIKPS
Trigger: AGAAGGCTTTATGGAGATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATAATCTTATGGTTCATTTaGAGGCTCTTAGCCATCCTT +
Preference number: 3 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIILWFI*RLLAIL
Trigger: AAGGATGGCTAAGAGCCTCAAAATGAACCATAAGAT...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATAAGACAAAAACAGTATTaGCCAACCCTCATACTACTT +
Preference number: 3 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIRQKQY*PTLILL
Trigger: AAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTCT...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGACTTTCAAACCTGCCCTaGGGGAAACAGGTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRLSNLP*GKQVSP
Trigger: TGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAAG...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR GCA 72 bp GGAACTTCATGGGATTCTAATGCTGAAGGAAGCTCCTaGTTTGGAGCTAGTGCTCCATTTTCAGTCCTACCA +
Preference number: 3 (lower is better)
Translates to: GTSWDSNAEGSS*FGASAPFSVLP
Trigger: TGGTAGGACTGAAAATGGAGCACTAGCTCCAAAGCAGGAGCTTCCTTCAGCATTAGAATCCCATGAAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR CCA 72 bp AAAATGACTGCTCATTTGCTAACCAAACAGATACTCTaGCGATGCCACTGCTTGGCACTGCCATATCACCAC +
Preference number: 3 (lower is better)
Translates to: KMTAHLLTKQIL*RCHCLALPYHH
Trigger: GTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp GGAGAGGAGGCAAGTCTCAGTGTAGTGCATGTGAAATaGGGTTATGTCCTACTTTATACGGTAGCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: GEEASLSVVHVK*GYVLLYTVAED
Trigger: ATCCTCAGCTACCGTATAAAGTAGGACATAACCCCATTTCACATGCACTACACTGAGACTTGCCTCCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAATAGCCATTGAGAGGTaGCTCCCTTCTTACCTACTC +
Preference number: 3 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRIAIER*LPSYLL
Trigger: GAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTAT...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCCAGAGAACAAACCCTTaGATCCAAAAATCCACCTTA +
Preference number: 3 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIQRTNP*IQKSTL
Trigger: TAAGGTGGATTTTTGGATCAAAGGGTTTGTTCTCTG...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp ATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTaGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCA +
Preference number: 3 (lower is better)
Translates to: MAQIQAYMVLGS*DLHKAFFPVVP
Trigger: TGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACAGACAAAAACAGTATTaGCCAACCCTCATACTACTT +
Preference number: 3 (lower is better)
Translates to: LLTKQILWRCHCLALPYHRQKQY*PTLILL
Trigger: AAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTCT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTATGGCGATGCCACTGCTaGGCACTGCCATATCACCAC +
Preference number: 3 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLWRCHC*ALPYHH
Trigger: GTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCA...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR TCA 72 bp ATAGCCATTGAGAGGTTGCTCCCTTCTTACCTACTCTaGTACAAGAATTCTGTCATTCCAGCCGTCTTCCAA +
Preference number: 3 (lower is better)
Translates to: IAIERLLPSYLL*YKNSVIPAVFQ
Trigger: TTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp TGGAGACTTGAAAAACAGAGGAGCGTGAAGATTAAGTaGAGACAAACGGCACACAGGAAACAGAAATTCCCA +
Preference number: 3 (lower is better)
Translates to: WRLEKQRSVKIK*RQTAHRKQKFP
Trigger: TGGGAATTTCTGTTTCCTGTGTGCCGTTTGTCTCCACTTAATCTTCACGCTCCTCTGTTTTTCAAGTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CAA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGTTATTGGACACTGACTaGTTTCCCCTCAGCCACAAA +
Preference number: 3 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKLLDTD*FPLSHK
Trigger: TTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAA...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAACACAGGGAAGCTTCCTaGTATATAGGAACCGCATAC +
Preference number: 3 (lower is better)
Translates to: LASESFLNNADIRAAKTKHREAS*YIGTAY
Trigger: GTATGCGGTTCCTATATACAAGGAAGCTTCCCTGTG...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCACAGGGAAGCTTCCTaGTATATAGGAACCGCATAC +
Preference number: 3 (lower is better)
Translates to: EANSHKTANPYDLQWKKYHREAS*YIGTAY
Trigger: GTATGCGGTTCCTATATACAAGGAAGCTTCCCTGTG...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR GCA 72 bp AAAGCCATGACAGACCATTACCCTTATGTTTACATTTaGCTTCAACACTGCCATCCGCTACAAATTTTTCCC +
Preference number: 3 (lower is better)
Translates to: KAMTDHYPYVYI*LQHCHPLQIFP
Trigger: GGGAAAAATTTGTAGCGGATGGCAGTGTTGAAGGCAAATGTAAACATAAGGGTAATGGTCTGTCATGGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR GCA 72 bp TACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATaGCACCTGAAAACCTACTTGGAAAGAAGCCAGTTA +
Preference number: 3 (lower is better)
Translates to: YKNSVIPAVFQI*HLKTYLERSQL
Trigger: TAACTGGCTTCTTTCCAAGTAGGTTTTCAGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACATCTTATGGTTCATTTaGAGGCTCTTAGCCATCCTT +
Preference number: 3 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNILWFI*RLLAIL
Trigger: AAGGATGGCTAAGAGCCTCAAAATGAACCATAAGAT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATCCCTTATGTTTACATTaGCCTTCAACACTGCCATCC +
Preference number: 3 (lower is better)
Translates to: IFKDSGLADYRQTGILTNPLCLH*PSTLPS
Trigger: GGATGGCAGTGTTGAAGGCAAATGTAAACATAAGGG...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGAGACAAAAACAGTATTaGCCAACCCTCATACTACTT +
Preference number: 3 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKRQKQY*PTLILL
Trigger: AAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTCT...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACATCATTTCCTCTTCTaGTGTGCCACCATCCAGTTT +
Preference number: 3 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLHHFLF*CATIQF
Trigger: AAACTGGATGGTGGCACACAAGAAGAGGAAATGATG...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGAAAATGACTGCTCATTaGCTAACCAAACAGATACTC +
Preference number: 3 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKKMTAH*LTKQIL
Trigger: GAGTATCTGTTTGGTTAGCAAATGAGCAGTCATTTT...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR-3UTR CAA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGTCAGATGATGAGAAGTaGAAAATATCAGCCCCATAT +
Preference number: 3 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKSDDEK*KISAPY
Trigger: ATATGGGGCTGATATTTTCAACTTCTCATCATCTGA...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR-3UTR CAA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATCCCTTATGTTTACATTaGCCTTCAACACTGCCATCC +
Preference number: 3 (lower is better)
Translates to: DQSICISSPIKVFHSLFDPLCLH*PSTLPS
Trigger: GGATGGCAGTGTTGAAGGCAAATGTAAACATAAGGG...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CCA 72 bp CTACCAGATTGGCAAAAATTTTTAAGGATTCAGGGTTaGCAGACTATAGGCAAACAGGCATTCTTACTAATG +
Preference number: 3 (lower is better)
Translates to: LPDWQKFLRIQG*QTIGKQAFLLM
Trigger: CATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAATCTGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAGTGGCTAGGAAGCTGTaGGACTCAGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPVARKL*DSGGQA
Trigger: GGCCTGGCCTCCTGAGTCCCACAGCTTCCTAGCCAC...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATATCAGGAGGCCAGGCCTaGTCACATGCTCACCTAAGC +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQISGGQA*SHAHLS
Trigger: GCTTAGGTGAGCATGTGACCAGGCCTGGCCTCCTGA...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATACTCTGGCGATGCCACTaGTTGGCACTGCCATATCAC +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQILWRCH*LALPYH
Trigger: GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAG...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATATTTTGTGTGCGTCTCTaGCCTGAGCCACAGACGGCA +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIFCVRL*PEPQTA
Trigger: TGCCGTCTGTGGCTCAGGCCAGAGACGCACACAAAA...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACACAGGTGACCTCCCCTaGGGAATGCTCAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHTGDLP*GMLRQG
Trigger: CCCTTGTCTGAGCATTCCTCAGGGGAGGTCACCTGT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCTGGGAACCTCACAGGTaGCCTCCCCTGAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIWEPHR*PPLRNA
Trigger: AGCATTCCTCAGGGGAGGTCACCTGTGAGGTTCCCA...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGGCTGAAGGAAGCTCCTaGTTTGGAGCTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPAEGSS*FGASAP
Trigger: TGGAGCACTAGCTCCAAAGCAGGAGCTTCCTTCAGC...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTCAGTGCCTTAGGGAATaGAGCTCCCAGGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTQCLRE*SSQDAH
Trigger: GTGGGCATCCTGGGAGCTCCATTCCCTAAGGCACTG...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAGGCGATGCCACTGCTTaGCACTGCCATATCACCACT +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPGDATA*HCHITT
Trigger: AGTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCC...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAAGGATGGCAACAAACTaGTCCAGCACTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPRMATN*SSTTSS
Trigger: GGAGCTGGTAGTGCTGGAGCAGTTTGTTGCCATCCT...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATAGCCACTGCTTGGCACTaGCATATCACCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIATAWH*HITTSS
Trigger: TGATGAAGTGGTGATATGGCAGTGCCAAGCAGTGGC...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATACTGTCGGAAAATCTCTaGGTCTGGGAGATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQILSENL*VWEMVP
Trigger: TGGAACCATCTCCCAGACCCAGAGATTTTCCGACAG...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACGGCGATGCCACTGCTTaGCACTGCCATATCACCACT +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHGDATA*HCHITT
Trigger: AGTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCC...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCCACCCATGGCATGGTaGATATGTCCCTGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHPPMAW*ICPWSL
Trigger: TAGACTCCAGGGACATATTCACCATGCCATGGGTGG...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAGGCCTTTGGGAAGACTaGAGGTGGACAGAGAACAAA +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPGLWED*RWTENK
Trigger: TTTGTTCTCTGTCCACCTTCAGTCTTCCCAAAGGCC...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCTGAAGGAAGCTCCTaGTTTGGAGCTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTAEGSS*FGASAP
Trigger: TGGAGCACTAGCTCCAAAGCAGGAGCTTCCTTCAGC...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGTGGACTCTCTGGTGTTaGACAAGAATGGAACTTCGG +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPWTLWC*TRMELR
Trigger: CCGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCA...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAGCCACTGCTTGGCACTaGCATATCACCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPATAWH*HITTSS
Trigger: TGATGAAGTGGTGATATGGCAGTGCCAAGCAGTGGC...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATAAATAGCCACCACCCATaGCATGGTGAATATGTCCCT +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQINSHHP*HGEYVP
Trigger: AGGGACATATTCACCATGCCATGGGTGGTGGCTATT...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATGTTCCAGGGGATACTTaGTCCCTCTTCGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHVPGDT*SLFAIR
Trigger: CCTGATGGCGAAGAGGGATCAAGTATCCCCTGGAAC...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAGAGGAACACCCATATTaGGAGTGCCAGGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPEEHPY*ECQELH
Trigger: ATGAAGTTCCTGGCACTCTCAATATGGGTGTTCCTC...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGGGGCCTCCAGAAAAATaGCATCAGAACTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPGPPEK*HQNLVL
Trigger: GAGAACTAAGTTCTGATGTCATTTTTCTGGAGGCCC...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCCCATCATCATCACAGTaGCTTAGGGAATGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIPSSSQ*LREWSS
Trigger: GGAGCTCCATTCCCTAAGGCACTGTGATGATGATGG...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261332.11
ENST00000399061.3
CDS-3UTR GCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGCAGTACCTAGCACAGTaGCTTGTCGGTAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPQYLAQ*LVGRKC
Trigger: ACATTTTCTACCGACAAGGCACTGTGCTAGGTACTG...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATATTTCCCACAGAGCTTTaGCTTAGCCTCAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIFPTEL*LSLRIL
Trigger: AAGGATTCTGAGGCTAAGGCAAAGCTCTGTGGGAAA...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACTCTGGGTCTGGGAGATaGTTCCAGGGGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHSGSGR*FQGILD
Trigger: ATCAAGTATCCCCTGGAACCATCTCCCAGACCCAGA...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCACCAAACAGATACTCTaGCGATGCCACTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGITKQIL*RCHCLA
Trigger: TGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGT...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGTCAGGAGGCCAGGCCTaGTCACATGCTCACCTAAGC +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRSGGQA*SHAHLS
Trigger: GCTTAGGTGAGCATGTGACCAGGCCTGGCCTCCTGA...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACGTGGCTAGGAAGCTGTaGGACTCAGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNVARKL*DSGGQA
Trigger: GGCCTGGCCTCCTGAGTCCCACAGCTTCCTAGCCAC...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGAAATTCAGGCTTACATaGTCCTTGGTTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPKFRLT*SLVPGI
Trigger: GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTT...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGGTTCCAGGGGATACTTaGTCCCTCTTCGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRVPGDT*SLFAIR
Trigger: CCTGATGGCGAAGAGGGATCAAGTATCCCCTGGAAC...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCGAGGAACACCCATATTaGGAGTGCCAGGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIEEHPY*ECQELH
Trigger: ATGAAGTTCCTGGCACTCTCAATATGGGTGTTCCTC...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGACAGATACTCTGGCGATaGCACTGCTTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRQILWR*HCLALP
Trigger: TGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTG...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCAGATACTCTGGCGATaGCACTGCTTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRQILWR*HCLALP
Trigger: TGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTTTTTGTGTGCGTCTCTaGCCTGAGCCACAGACGGCA +
Preference number: 4 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPFCVRL*PEPQTA
Trigger: TGCCGTCTGTGGCTCAGGCCAGAGACGCACACAAAA...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACAATAGCCACCACCCATaGCATGGTGAATATGTCCCT +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHNSHHP*HGEYVP
Trigger: AGGGACATATTCACCATGCCATGGGTGGTGGCTATT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCACAGACTCTCTCCACATaGCACAAATTCAGGCTTACA +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPQTLST*HKFRLT
Trigger: TGTAAGCCTGAATTTGTGCCATGTGGAGAGAGTCTG...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CAA 72 bp CTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTaGGTTCCTGGGATCTCCATAAAGCCTTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSTWHKFRLTWS*VPGISIKPSFQ
Trigger: CTGGAAAGAAGGCTTTATGGAGATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACATGAAGAATAAGGGCTaGGCCCTGACTGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHMKNKG*ALTEVF
Trigger: AAACACTTCAGTCAGGGCTCAGCCCTTATTCTTCAT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACACAGGTGACCTCCCCTaGGGAATGCTCAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNTGDLP*GMLRQG
Trigger: CCCTTGTCTGAGCATTCCTCAGGGGAGGTCACCTGT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGTCGTGGACTCACCTCTaGACACTGGAGAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKSWTHL*TLESQL
Trigger: TAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGA...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGACCACCCATGGCATGGTaGATATGTCCCTGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRPPMAW*ICPWSL
Trigger: TAGACTCCAGGGACATATTCACCATGCCATGGGTGG...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGCAAACGAAATTATCATaGCTTCTCGGTAACACTGTG +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPQTKLS*LLGNTV
Trigger: CACAGTGTTACCGAGAAGTCATGATAATTTCGTTTG...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATGGCCTTTGGGAAGACTaGAGGTGGACAGAGAACAAA +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHGLWED*RWTENK
Trigger: TTTGTTCTCTGTCCACCTTCAGTCTTCCCAAAGGCC...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGGTGAAACGTGTCCAATaGAAGAAAAGCCTGAATTAC +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPVKRVQ*KKSLNY
Trigger: GTAATTCAGGCTTTTCTTTCATTGGACACGTTTCAC...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR GCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCACCTTATGTTTACATTTaGCTTCAACACTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPPYVYI*LQHCHP
Trigger: CGGATGGCAGTGTTGAAGGCAAATGTAAACATAAGG...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTCAGTACCTAGCACAGTaGCTTGTCGGTAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTQYLAQ*LVGRKC
Trigger: ACATTTTCTACCGACAAGGCACTGTGCTAGGTACTG...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGAGCCAATGCCTAGCATaGAGATTATTTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPSQCLA*RLFQYM
Trigger: CATGTACTGAAATAATCTGCATGCTAGGCATTGGCT...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATTCTGGGTCTGGGAGATaGTTCCAGGGGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSGSGR*FQGILD
Trigger: ATCAAGTATCCCCTGGAACCATCTCCCAGACCCAGA...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAGATGCCCACTTGAGCTaGTTCTCCACAGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRDAHLS*FSTASS
Trigger: GCTTGATGCTGTGGAGAACCAGCTCAAGTGGGCATC...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATCCAGCAAATGCTCAGTaGCTACTGGGCAGATATCAG +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHPANAQ*LLGRYQ
Trigger: CTGATATCTGCCCAGTAGCCACTGAGCATTTGCTGG...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAATTCTTTTATCACTGTaGCTAGGAAGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPILLSL*LGSCGT
Trigger: AGTCCCACAGCTTCCTAGCCACAGTGATAAAAGAAT...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTAAATTCAGGCTTACATaGTCCTTGGTTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTKFRLT*SLVPGI
Trigger: GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTT...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCCAGACTCTCTCCACATaGCACAAATTCAGGCTTACA +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIQTLST*HKFRLT
Trigger: TGTAAGCCTGAATTTGTGCCATGTGGAGAGAGTCTG...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATGAGGAACACCCATATTaGGAGTGCCAGGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHEEHPY*ECQELH
Trigger: ATGAAGTTCCTGGCACTCTCAATATGGGTGTTCCTC...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTTGGGAACCTCACAGGTaGCCTCCCCTGAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: LAKIFKDSGLADYRQTGIWEPHR*PPLRNA
Trigger: AGCATTCCTCAGGGGAGGTCACCTGTGAGGTTCCCA...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTATCGTGGACTCACCTCTaGACACTGGAGAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVSWTHL*TLESQL
Trigger: TAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGA...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATAGCTTTATTGGACACTaGCTTGTTTCCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSFIGH*LVSPQP
Trigger: TGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCT...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGCCTTCTTACCTACTCTaGTACAAGAATTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPPSYLL*YKNSVI
Trigger: AATGACAGAATTCTTGTATCAGAGTAGGTAAGAAGG...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATAATGCACAAAGACATCTaGATAGGATGTTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIMHKDI*IGCLLW
Trigger: CCAAAGTAAACATCCTATTCAGATGTCTTTGTGCAT...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCGGCCTTTGGGAAGACTaGAGGTGGACAGAGAACAAA +
Preference number: 4 (lower is better)
Translates to: TYSDTRILSFQPSSKYATGLWED*RWTENK
Trigger: TTTGTTCTCTGTCCACCTTCAGTCTTCCCAAAGGCC...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCTCTTTCTTTCAAACCTaGCCTTGGGGAAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGISFFQT*PWGNRF
Trigger: AAACCTGTTTCCCCAAGGGCAGGTTTGAAAGAAAGA...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGATTTGCCTTCAACACTaGCATCCGCTACAAATTTTT +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPICLQH*HPLQIF
Trigger: AAAAATTTGTAGCGGATGGCAGTGTTGAAGGCAAAT...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGGCCACTGCTTGGCACTaGCATATCACCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRATAWH*HITTSS
Trigger: TGATGAAGTGGTGATATGGCAGTGCCAAGCAGTGGC...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTACTCTGGCGATGCCACTaGTTGGCACTGCCATATCAC +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVLWRCH*LALPYH
Trigger: GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAG...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTCGGTGTCTAAGCCAATaGCTAGCATGCAGATTATTT +
Preference number: 4 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTRCLSQ*LACRLF
Trigger: AAATAATCTGCATGCTAGGCATTGGCTTAGACACCG...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGCCCTATGATTTACAGTaGAAGAAATACCTACCTACT +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPPYDLQ*KKYLPT
Trigger: AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGG...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CCAGGCCTGGTCACATGCTCACCTAAGCCACAGGGAATAGGTTCCCCACAAATACCCTATGATTTACAGTaGAAGAAATACCTACCTACT +
Preference number: 4 (lower is better)
Translates to: PGLVTCSPKPQGIGSPQIPYDLQ*KKYLPT
Trigger: AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGG...TATTTGTGGGGAACCTATTCCCTGTGGCTTAGGTGAGCATGTGACCAGGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTACCAAACAGATACTCTaGCGATGCCACTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPTKQIL*RCHCLA
Trigger: TGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGT...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCCCAGCAAATGCTCAGTaGCTACTGGGCAGATATCAG +
Preference number: 4 (lower is better)
Translates to: TYSDTRILSFQPSSKYATPANAQ*LLGRYQ
Trigger: CTGATATCTGCCCAGTAGCCACTGAGCATTTGCTGG...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGGTAGTGCATGTGAAATaGGGTTATGTCCTACTTTAT +
Preference number: 4 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPVVHVK*GYVLLY
Trigger: ATAAAGTAGGACATAACCCCATTTCACATGCACTAC...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAGTGGCTAGGAAGCTGTaGGACTCAGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLVARKL*DSGGQA
Trigger: GGCCTGGCCTCCTGAGTCCCACAGCTTCCTAGCCAC...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAGGGCTGAAGATAAGCTaGGGGCCTCCTGTGTTAACC +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVGLKIS*GPPVLT
Trigger: GGTTAACACAGGAGGCCCCCAGCTTATCTTCAGCCC...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR TCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATCCCAGGATGCCCACTTaGGCTGGTTCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: IFKDSGLADYRQTGILTNPRMPT*AGSPQH
Trigger: ATGCTGTGGAGAACCAGCTCAAGTGGGCATCCTGGG...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACCCAGGATGCCCACTTaGGCTGGTTCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLPRMPT*AGSPQH
Trigger: ATGCTGTGGAGAACCAGCTCAAGTGGGCATCCTGGG...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACAGGATGAGTAGCTTTTaGATTTTCCTGCAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHRMSSF*IFLQAK
Trigger: TTTTGCCTGCAGGAAAATTCAAAAGCTACTCATCCT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAACAGGTGACCTCCCCTaGGGAATGCTCAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLTGDLP*GMLRQG
Trigger: CCCTTGTCTGAGCATTCCTCAGGGGAGGTCACCTGT...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTGGGAACCTCACAGGTaGCCTCCCCTGAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTWEPHR*PPLRNA
Trigger: AGCATTCCTCAGGGGAGGTCACCTGTGAGGTTCCCA...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAAGCTTTATTGGACACTaGCTTGTTTCCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRSFIGH*LVSPQP
Trigger: TGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCT...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATGGGCCTCCAGAAAAATaGCATCAGAACTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHGPPEK*HQNLVL
Trigger: GAGAACTAAGTTCTGATGTCATTTTTCTGGAGGCCC...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGATGGACTCTCTGGTGTTaGACAAGAATGGAACTTCGG +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRWTLWC*TRMELR
Trigger: CCGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCA...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACACCTCCCCTGAGGAATaGTCAGACAAGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYTSPEE*SDKGKR
Trigger: CCTCTTCCCCTTGTCTGAGCATTCCTCAGGGGAGGT...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTTCCACCAGCTGGCCTTaGATTTATTACTATGCTTTT +
Preference number: 4 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTSTSWP*IYYYAF
Trigger: AAAAGCATAGTAATAAATGCAAGGCCAGCTGGTGGA...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATTTTCCCACAGAGCTTTaGCTTAGCCTCAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHFPTEL*LSLRIL
Trigger: AAGGATTCTGAGGCTAAGGCAAAGCTCTGTGGGAAA...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTCTGGCGATGCCACTaGTTGGCACTGCCATATCAC +
Preference number: 4 (lower is better)
Translates to: LAKIFKDSGLADYRQTGILWRCH*LALPYH
Trigger: GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAG...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAACAGATACTCTGGCGATaGCACTGCTTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LASESFLNNADIRAAKTKQILWR*HCLALP
Trigger: TGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTG...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTCAGTGCCTTAGGGAATaGAGCTCCCAGGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTQCLRE*SSQDAH
Trigger: GTGGGCATCCTGGGAGCTCCATTCCCTAAGGCACTG...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATTTTCAAACCTGCCCTTaGGGAAACAGGTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHFQTCP*GNRFLH
Trigger: ATGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAA...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCCACTTTTCCACCAGCTaGCCTTGCATTTATTACTAT +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIHFSTS*PCIYYY
Trigger: ATAGTAATAAATGCAAGGCCAGCTGGTGGAAAAGTG...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGAGAACATCTTCAATGTaGGGGGAGAGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKRTSSM*GERRQV
Trigger: GACTTGCCTCCTCTCCCCCCACATTGAAGATGTTCT...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAATAGGATGTTTACTTTaGCAATGTAATAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPIGCLL*QCNSER
Trigger: CCTCTCGCTATTACATTGCCAAAGTAAACATCCTAT...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGTCAGACCTCATTCAGTaGCATACCAGCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKSDLIQ*HTSTIS
Trigger: GGAGATGGTGCTGGTATGCCACTGAATGAGGTCTGA...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR TCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAGTTCCAGGGGATACTTaGTCCCTCTTCGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLVPGDT*SLFAIR
Trigger: CCTGATGGCGAAGAGGGATCAAGTATCCCCTGGAAC...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGATGAAGAATAAGGGCTaGGCCCTGACTGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRMKNKG*ALTEVF
Trigger: AAACACTTCAGTCAGGGCTCAGCCCTTATTCTTCAT...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATTGGCTATTTCTGAAATaGACAAGCCAAGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHWLFLK*TSQVRS
Trigger: TGACCTGACTTGGCTTGTTCATTTCAGAAATAGCCA...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR GCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACAGGATGGCAACAAACTaGTCCAGCACTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYRMATN*SSTTSS
Trigger: GGAGCTGGTAGTGCTGGAGCAGTTTGTTGCCATCCT...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAAGCTGAAGGAAGCTCCTaGTTTGGAGCTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LASESFLNNADIRAAKTKAEGSS*FGASAP
Trigger: TGGAGCACTAGCTCCAAAGCAGGAGCTTCCTTCAGC...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATTCTTTCTTTCAAACCTaGCCTTGGGGAAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSFFQT*PWGNRF
Trigger: AAACCTGTTTCCCCAAGGGCAGGTTTGAAAGAAAGA...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCATGATCTCTGAATCTTaGTTTCCTAGTCCACAAATC +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIMISES*FPSPQI
Trigger: GATTTGTGGACTAGGAAAGCAAGATTCAGAGATCAT...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGGTGCCAGGAACTTCATaGGATTCTAATGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRVPGTS*DSNAEG
Trigger: TCCTTCAGCATTAGAATCCCATGAAGTTCCTGGCAC...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTGGCGATGCCACTGCTTaGCACTGCCATATCACCACT +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTGDATA*HCHITT
Trigger: AGTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCC...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACGTAGTGCATGTGAAATaGGGTTATGTCCTACTTTAT +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHVVHVK*GYVLLY
Trigger: ATAAAGTAGGACATAACCCCATTTCACATGCACTAC...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACAGAACATCTTCAATGTaGGGGGAGAGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNRTSSM*GERRQV
Trigger: GACTTGCCTCCTCTCCCCCCACATTGAAGATGTTCT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCATAGGATGTTTACTTTaGCAATGTAATAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIIGCLL*QCNSER
Trigger: CCTCTCGCTATTACATTGCCAAAGTAAACATCCTAT...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACGTAGGTATGGTTATATaGGGAAATGAACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHVGMVI*GNEHSP
Trigger: TGGAGAATGTTCATTTCCCCATATAACCATACCTAC...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATTCAGGAGGCCAGGCCTaGTCACATGCTCACCTAAGC +
Preference number: 4 (lower is better)
Translates to: DQSICISSPIKVFHSLFDSGGQA*SHAHLS
Trigger: GCTTAGGTGAGCATGTGACCAGGCCTGGCCTCCTGA...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATGGGCTTTCCTTAGCCTaGCTTAAGTTATATACCCAT +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHGLSLA*LKLYTH
Trigger: ATGGGTATATAACTTAAGCCAGGCTAAGGAAAGCCC...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
3UTR CAA 72 bp TTTGGGAAGACTGAAGGTGGACAGAGAACAAACCCTTaGATCCAAAAATCCACCTTACTGGACTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: FGKTEGGQRTNP*IQKSTLLDSRL
Trigger: TAGTCTGGAGTCCAGTAAGGTGGATTTTTGGATCAAAGGGTTTGTTCTCTGTCCACCTTCAGTCTTCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGATGAAGAATAAGGGCTaGGCCCTGACTGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKMKNKG*ALTEVF
Trigger: AAACACTTCAGTCAGGGCTCAGCCCTTATTCTTCAT...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATCCTCAGAATCCTTTCTaGACAATGCAGATATTAGAG +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHPQNPF*TMQILE
Trigger: CTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGG...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTCCACCCATGGCATGGTaGATATGTCCCTGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTPPMAW*ICPWSL
Trigger: TAGACTCCAGGGACATATTCACCATGCCATGGGTGG...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAGTGGTAAGTGGAATGTaGTTGGTAGCATTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRVVSGM*LVALEK
Trigger: TTTCTCCAATGCTACCAATCACATTCCACTTACCAC...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTGTGAAAATACAGTTATaGAGGCCTTTGGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPVKIQL*RPLGRL
Trigger: CAGTCTTCCCAAAGGCCTTCATAACTGTATTTTCAC...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATATTTCTAAGCCTCAGTaGAACGTGTCCAATGAAAGA +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHISKPQ*NVSNER
Trigger: TCTTTCATTGGACACGTTTCACTGAGGCTTAGAAAT...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR GCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACTGGACTCTCTGGTGTTaGACAAGAATGGAACTTCGG +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNWTLWC*TRMELR
Trigger: CCGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCA...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACGACAAAAACAGTATTTaGCAACCCTCATACTACTTT +
Preference number: 4 (lower is better)
Translates to: LLTKQILWRCHCLALPYHDKNSI*QPSYYF
Trigger: AAAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTC...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATAGCCAATGCCTAGCATaGAGATTATTTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSQCLA*RLFQYM
Trigger: CATGTACTGAAATAATCTGCATGCTAGGCATTGGCT...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCCGGTGTCTAAGCCAATaGCTAGCATGCAGATTATTT +
Preference number: 4 (lower is better)
Translates to: TYSDTRILSFQPSSKYATRCLSQ*LACRLF
Trigger: AAATAATCTGCATGCTAGGCATTGGCTTAGACACCG...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCGGTGTCTAAGCCAATaGCTAGCATGCAGATTATTT +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRRCLSQ*LACRLF
Trigger: AAATAATCTGCATGCTAGGCATTGGCTTAGACACCG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTTCTGGGTCTGGGAGATaGTTCCAGGGGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: AKIFKDSGLADYRQTGILSGSGR*FQGILD
Trigger: ATCAAGTATCCCCTGGAACCATCTCCCAGACCCAGA...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACGAAAATCTCTGGGTCTaGGAGATGGTTCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYENLWV*EMVPGD
Trigger: ATCCCCTGGAACCATCTCCCAGACCCAGAGATTTTC...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTGTCGGAAAATCTCTaGGTCTGGGAGATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LAKIFKDSGLADYRQTGILSENL*VWEMVP
Trigger: TGGAACCATCTCCCAGACCCAGAGATTTTCCGACAG...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTATTTTGTGTGCGTCTCTaGCCTGAGCCACAGACGGCA +
Preference number: 4 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLFCVRL*PEPQTA
Trigger: TGCCGTCTGTGGCTCAGGCCAGAGACGCACACAAAA...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATGATGCCCACTTGAGCTaGTTCTCCACAGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: IFKDSGLADYRQTGILTNDAHLS*FSTASS
Trigger: GCTTGATGCTGTGGAGAACCAGCTCAAGTGGGCATC...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAAATAGCCACCACCCATaGCATGGTGAATATGTCCCT +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVNSHHP*HGEYVP
Trigger: AGGGACATATTCACCATGCCATGGGTGGTGGCTATT...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAGAACATCTTCAATGTaGGGGGAGAGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: AKIFKDSGLADYRQTGILRTSSM*GERRQV
Trigger: GACTTGCCTCCTCTCCCCCCACATTGAAGATGTTCT...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCTTAAACTGTGGTAAGTaGAATGTGATTGGTAGCATT +
Preference number: 4 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGILNCGK*NVIGSI
Trigger: AATGCTACCAATCACATTCCACTTACCACAGTTTAA...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCATTCTTTTATCACTGTaGCTAGGAAGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: TYSDTRILSFQPSSKYATILLSL*LGSCGT
Trigger: AGTCCCACAGCTTCCTAGCCACAGTGATAAAAGAAT...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGATTCTTTTATCACTGTaGCTAGGAAGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRILLSL*LGSCGT
Trigger: AGTCCCACAGCTTCCTAGCCACAGTGATAAAAGAAT...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAGTTTCTAGGCAGGTATaGCACCATTTCTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRVSRQV*HHFFQD
Trigger: ATCTTGAAAGAAATGGTGTCATACCTGCCTAGAAAC...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTTCCAAATATGCCACCTaGAAACCTACTTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPSKYAT*KPTWKE
Trigger: TTCTTTCCAAGTAGGTTTTCAGGTGGCATATTTGGA...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTCCTCAGAATCCTTTCTaGACAATGCAGATATTAGAG +
Preference number: 4 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPPQNPF*TMQILE
Trigger: CTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGG...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGTATCAGCAATCTGCATaGCCTAAAATGACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRYQQSA*PKMTAH
Trigger: ATGAGCAGTCATTTTAGGTCATGCAGATTGCTGATA...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCAAACGAAATTATCATaGCTTCTCGGTAACACTGTG +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRQTKLS*LLGNTV
Trigger: CACAGTGTTACCGAGAAGTCATGATAATTTCGTTTG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGGTGAAAATACAGTTATaGAGGCCTTTGGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKVKIQL*RPLGRL
Trigger: CAGTCTTCCCAAAGGCCTTCATAACTGTATTTTCAC...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCGGTTATATGGGGAAATaGACATTCTCCATACACTTG +
Preference number: 4 (lower is better)
Translates to: TYSDTRILSFQPSSKYATGYMGK*TFSIHL
Trigger: CAAGTGTATGGAGAATGTTCATTTCCCCATATAACC...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAGGGCCTCCAGAAAAATaGCATCAGAACTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVGPPEK*HQNLVL
Trigger: GAGAACTAAGTTCTGATGTCATTTTTCTGGAGGCCC...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAAGGATGGCAACAAACTaGTCCAGCACTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLRMATN*SSTTSS
Trigger: GGAGCTGGTAGTGCTGGAGCAGTTTGTTGCCATCCT...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATCCATCATCATCACAGTaGCTTAGGGAATGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: IFKDSGLADYRQTGILTNPSSSQ*LREWSS
Trigger: GGAGCTCCATTCCCTAAGGCACTGTGATGATGATGG...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261332.11
ENST00000399061.3
CDS-3UTR GCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGTCTTTCTTTCAAACCTaGCCTTGGGGAAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKSFFQT*PWGNRF
Trigger: AAACCTGTTTCCCCAAGGGCAGGTTTGAAAGAAAGA...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACAAACAAGCTCCATTCTaGCTCACTTTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNKQAPF*LTFPPA
Trigger: AGCTGGTGGAAAAGTGAGGCAGAATGGAGCTTGTTT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAGCCGTCTTCCAAATATaGCACCTGAAAACCTACTTG +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVAVFQI*HLKTYL
Trigger: CAAGTAGGTTTTCAGGTGGCATATTTGGAAGACGGC...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACGCCGTCTTCCAAATATaGCACCTGAAAACCTACTTG +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNAVFQI*HLKTYL
Trigger: CAAGTAGGTTTTCAGGTGGCATATTTGGAAGACGGC...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTCTGTCGGAAAATCTCTaGGTCTGGGAGATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGLSENL*VWEMVP
Trigger: TGGAACCATCTCCCAGACCCAGAGATTTTCCGACAG...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAGATGCCCACTTGAGCTaGTTCTCCACAGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLDAHLS*FSTASS
Trigger: GCTTGATGCTGTGGAGAACCAGCTCAAGTGGGCATC...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGAGTTTACAGCTTTATTaGACACTGACTTGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRSLQLY*TLTCFP
Trigger: GGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACT...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTAGCGTGAAGATTAAGTaGAGACAAACGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: LAKIFKDSGLADYRQTGISVKIK*RQTAHR
Trigger: CCTGTGTGCCGTTTGTCTCCACTTAATCTTCACGCT...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR TCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAAGCTTTATTGGACACTaGCTTGTTTCCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLSFIGH*LVSPQP
Trigger: TGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCT...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGTCCAAATATGCCACCTaGAAACCTACTTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKSKYAT*KPTWKE
Trigger: TTCTTTCCAAGTAGGTTTTCAGGTGGCATATTTGGA...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGTCTCCATACACTTGGTaGAAATACAGTTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKSPYTW*KYSYEG
Trigger: GCCTTCATAACTGTATTTTCACCAAGTGTATGGAGA...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGGGTTATATGGGGAAATaGACATTCTCCATACACTTG +
Preference number: 4 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKGYMGK*TFSIHL
Trigger: CAAGTGTATGGAGAATGTTCATTTCCCCATATAACC...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTAATAAGGAACGCAGGTaGAAAGTCACTCTAAAATTC +
Preference number: 4 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPNKERR*KVTLKF
Trigger: GAATTTTAGAGTGACTTTTCACCTGCGTTCCTTATT...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR TCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGAACACAGGAGTCTTaGCAAGAAGGGGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGRTQES*QEGAED
Trigger: ATCTTCAGCCCCTTCTTGTCAAGACTCCTGTGTTCT...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR GCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAATTTGCCTTCAACACTaGCATCCGCTACAAATTTTT +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRICLQH*HPLQIF
Trigger: AAAAATTTGTAGCGGATGGCAGTGTTGAAGGCAAAT...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACCCTTATGTTTACATTTaGCTTCAACACTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNPYVYI*LQHCHP
Trigger: CGGATGGCAGTGTTGAAGGCAAATGTAAACATAAGG...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACAAACAAGCTCCATTCTaGCTCACTTTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYKQAPF*LTFPPA
Trigger: AGCTGGTGGAAAAGTGAGGCAGAATGGAGCTTGTTT...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAAAAACAAGCTCCATTCTaGCTCACTTTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LASESFLNNADIRAAKTKKQAPF*LTFPPA
Trigger: AGCTGGTGGAAAAGTGAGGCAGAATGGAGCTTGTTT...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACTTTCCCACAGAGCTTTaGCTTAGCCTCAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYFPTEL*LSLRIL
Trigger: AAGGATTCTGAGGCTAAGGCAAAGCTCTGTGGGAAA...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGAGCCAATGCCTAGCATaGAGATTATTTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKSQCLA*RLFQYM
Trigger: CATGTACTGAAATAATCTGCATGCTAGGCATTGGCT...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATGGAATGATTACACAGTaGCTTAGGGAATGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: IFKDSGLADYRQTGILTNGMITQ*LREWSS
Trigger: GGAGCTCCATTCCCTAAGGCACTGTGTAATCATTCC...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR GCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTATATAGGGTTAGCAACTaGCTTCAGCGAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVYRVSN*LQRRGK
Trigger: TTTTCCTCTTCGCTGAAGGCAGTTGCTAACCCTATA...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR CCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATGAAAATCTCTGGGTCTaGGAGATGGTTCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: DQSICISSPIKVFHSLFDENLWV*EMVPGD
Trigger: ATCCCCTGGAACCATCTCCCAGACCCAGAGATTTTC...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTGTGCCAGGAACTTCATaGGATTCTAATGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LAKIFKDSGLADYRQTGIVPGTS*DSNAEG
Trigger: TCCTTCAGCATTAGAATCCCATGAAGTTCCTGGCAC...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTGTGCCAGGAACTTCATaGGATTCTAATGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: AKIFKDSGLADYRQTGILVPGTS*DSNAEG
Trigger: TCCTTCAGCATTAGAATCCCATGAAGTTCCTGGCAC...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACTTTCAAACCTGCCCTTaGGGAAACAGGTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYFQTCP*GNRFLH
Trigger: ATGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAA...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATACCAAACAGATACTCTaGCGATGCCACTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: DQSICISSPIKVFHSLFDTKQIL*RCHCLA
Trigger: TGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGT...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAGTAGGTATGGTTATATaGGGAAATGAACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRVGMVI*GNEHSP
Trigger: TGGAGAATGTTCATTTCCCCATATAACCATACCTAC...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTCAGACTCTCTCCACATaGCACAAATTCAGGCTTACA +
Preference number: 4 (lower is better)
Translates to: AKIFKDSGLADYRQTGILQTLST*HKFRLT
Trigger: TGTAAGCCTGAATTTGTGCCATGTGGAGAGAGTCTG...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAGTTTCTAGGCAGGTATaGCACCATTTCTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVVSRQV*HHFFQD
Trigger: ATCTTGAAAGAAATGGTGTCATACCTGCCTAGAAAC...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACAGGATGAGTAGCTTTTaGATTTTCCTGCAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNRMSSF*IFLQAK
Trigger: TTTTGCCTGCAGGAAAATTCAAAAGCTACTCATCCT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCACATGCAAGTCACATaGTCTCTGAATCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYHMQVT*SLNLAF
Trigger: GAAAGCAAGATTCAGAGATCATGTGACTTGCATGTG...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACGTGGTAAGTGGAATGTaGTTGGTAGCATTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYVVSGM*LVALEK
Trigger: TTTCTCCAATGCTACCAATCACATTCCACTTACCAC...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTGTGAAAATACAGTTATaGAGGCCTTTGGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: AKIFKDSGLADYRQTGILVKIQL*RPLGRL
Trigger: CAGTCTTCCCAAAGGCCTTCATAACTGTATTTTCAC...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACTCCACCAGCTGGCCTTaGATTTATTACTATGCTTTT +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNSTSWP*IYYYAF
Trigger: AAAAGCATAGTAATAAATGCAAGGCCAGCTGGTGGA...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATTTTCAAACCTGCCCTTaGGGAAACAGGTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IFKDSGLADYRQTGILTNFQTCP*GNRFLH
Trigger: ATGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAA...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGTTAAACTGTGGTAAGTaGAATGTGATTGGTAGCATT +
Preference number: 4 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRLNCGK*NVIGSI
Trigger: AATGCTACCAATCACATTCCACTTACCACAGTTTAA...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGGTAGGTATGGTTATATaGGGAAATGAACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKVGMVI*GNEHSP
Trigger: TGGAGAATGTTCATTTCCCCATATAACCATACCTAC...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAAGGGCTTTCCTTAGCCTaGCTTAAGTTATATACCCAT +
Preference number: 4 (lower is better)
Translates to: LASESFLNNADIRAAKTKGLSLA*LKLYTH
Trigger: ATGGGTATATAACTTAAGCCAGGCTAAGGAAAGCCC...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAAATTCAGGCTTACATaGTCCTTGGTTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGKFRLT*SLVPGI
Trigger: GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTT...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAAGTTTCTAGGCAGGTATaGCACCATTTCTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: LASESFLNNADIRAAKTKVSRQV*HHFFQD
Trigger: ATCTTGAAAGAAATGGTGTCATACCTGCCTAGAAAC...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACTATCAGCAATCTGCATaGCCTAAAATGACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYYQQSA*PKMTAH
Trigger: ATGAGCAGTCATTTTAGGTCATGCAGATTGCTGATA...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTGTGGTAAGTGGAATGTaGTTGGTAGCATTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTVVSGM*LVALEK
Trigger: TTTCTCCAATGCTACCAATCACATTCCACTTACCAC...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAACTACTTCAAGGAATaGTTACACAGTGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGNYFKE*LHSALG
Trigger: CCCTAAGGCACTGTGTAATCATTCCTTGAAGTAGTT...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR GCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACTCCACCAGCTGGCCTTaGATTTATTACTATGCTTTT +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYSTSWP*IYYYAF
Trigger: AAAAGCATAGTAATAAATGCAAGGCCAGCTGGTGGA...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACATGATCTCTGAATCTTaGTTTCCTAGTCCACAAATC +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNMISES*FPSPQI
Trigger: GATTTGTGGACTAGGAAAGCAAGATTCAGAGATCAT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTAGTTTACAGCTTTATTaGACACTGACTTGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LAKIFKDSGLADYRQTGISLQLY*TLTCFP
Trigger: GGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACT...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACATAGGATGTTTACTTTaGCAATGTAATAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNIGCLL*QCNSER
Trigger: CCTCTCGCTATTACATTGCCAAAGTAAACATCCTAT...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTGGGCTTTCCTTAGCCTaGCTTAAGTTATATACCCAT +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTGLSLA*LKLYTH
Trigger: ATGGGTATATAACTTAAGCCAGGCTAAGGAAAGCCC...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAGCAGCTTCTCCCATGTaGTATTTGTCATGGTACTTA +
Preference number: 4 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLAASPM*YLSWYL
Trigger: TAAGTACCATGACAAATACCACATGGGAGAAGCTGC...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR CCA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGATAGTCAAAATGATGTaGCTAGGTATGGATGAAACT +
Preference number: 4 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKIVKMM*LGMDET
Trigger: AGTTTCATCCATACCTAGCCACATCATTTTGACTAT...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5
3UTR CAA 72 bp CCTACCAGATTGGCAAAAATTTTTAAGGATTCAGGGTaGGCAGACTATAGGCAAACAGGCATTCTTACTAAT +
Preference number: 4 (lower is better)
Translates to: PTRLAKIFKDSG*ADYRQTGILTN
Trigger: ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAATCTGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATGAGTAGCTTTTaGATTTTCCTGCAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGRMSSF*IFLQAK
Trigger: TTTTGCCTGCAGGAAAATTCAAAAGCTACTCATCCT...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTCCTTCTTACCTACTCTaGTACAAGAATTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: AKIFKDSGLADYRQTGILPSYLL*YKNSVI
Trigger: AATGACAGAATTCTTGTATCAGAGTAGGTAAGAAGG...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTATATCAGCAATCTGCATaGCCTAAAATGACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLYQQSA*PKMTAH
Trigger: ATGAGCAGTCATTTTAGGTCATGCAGATTGCTGATA...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTCAAACGAAATTATCATaGCTTCTCGGTAACACTGTG +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTQTKLS*LLGNTV
Trigger: CACAGTGTTACCGAGAAGTCATGATAATTTCGTTTG...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTCTCCATACACTTGGTaGAAATACAGTTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTSPYTW*KYSYEG
Trigger: GCCTTCATAACTGTATTTTCACCAAGTGTATGGAGA...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTACCTTATGTTTACATTTaGCTTCAACACTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLPYVYI*LQHCHP
Trigger: CGGATGGCAGTGTTGAAGGCAAATGTAAACATAAGG...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACACTTTTCCACCAGCTaGCCTTGCATTTATTACTAT +
Preference number: 4 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLHFSTS*PCIYYY
Trigger: ATAGTAATAAATGCAAGGCCAGCTGGTGGAAAAGTG...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTCACTTTTCCACCAGCTaGCCTTGCATTTATTACTAT +
Preference number: 4 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGHFSTS*PCIYYY
Trigger: ATAGTAATAAATGCAAGGCCAGCTGGTGGAAAAGTG...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATAACAGCAAACCCCTATaGTTTACAGTGGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: IFKDSGLADYRQTGILTNNSKPL*FTVEEI
Trigger: TATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTT...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTATGCACAAAGACATCTaGATAGGATGTTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTMHKDI*IGCLLW
Trigger: CCAAAGTAAACATCCTATTCAGATGTCTTTGTGCAT...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATTCTCCATACACTTGGTaGAAATACAGTTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: DQSICISSPIKVFHSLFDSPYTW*KYSYEG
Trigger: GCCTTCATAACTGTATTTTCACCAAGTGTATGGAGA...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATGGTTATATGGGGAAATaGACATTCTCCATACACTTG +
Preference number: 4 (lower is better)
Translates to: DQSICISSPIKVFHSLFDGYMGK*TFSIHL
Trigger: CAAGTGTATGGAGAATGTTCATTTCCCCATATAACC...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATAAAAACAGAGGAGCGTaGAGATTAAGTGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: DQSICISSPIKVFHSLFDKNRGA*RLSGDK
Trigger: TTTGTCTCCACTTAATCTTCACGCTCCTCTGTTTTT...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS-3UTR CCA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTCCCTATGATTTACAGTaGAAGAAATACCTACCTACT +
Preference number: 4 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTPYDLQ*KKYLPT
Trigger: AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGG...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CCA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACTTAAACTGTGGTAAGTaGAATGTGATTGGTAGCATT +
Preference number: 4 (lower is better)
Translates to: EANSHKTANPYDLQWKKYLNCGK*NVIGSI
Trigger: AATGCTACCAATCACATTCCACTTACCACAGTTTAA...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTACCTTCTTACCTACTCTaGTACAAGAATTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLPSYLL*YKNSVI
Trigger: AATGACAGAATTCTTGTATCAGAGTAGGTAAGAAGG...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR TCA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATATGCACAAAGACATCTaGATAGGATGTTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: DQSICISSPIKVFHSLFDMHKDI*IGCLLW
Trigger: CCAAAGTAAACATCCTATTCAGATGTCTTTGTGCAT...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTGACAAAAACAGTATTTaGCAACCCTCATACTACTTT +
Preference number: 4 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGDKNSI*QPSYYF
Trigger: AAAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTC...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR GCA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAATGATCTCTGAATCTTaGTTTCCTAGTCCACAAATC +
Preference number: 4 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLMISES*FPSPQI
Trigger: GATTTGTGGACTAGGAAAGCAAGATTCAGAGATCAT...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS CCA 90 bp CCGCTTGTGGGAAATGGAGGGAAGGCCCACGGTCCCGACAATGTTTaGGCAGGGTACCTCGTCCCAGGTGGATCGCCCACCTTACTGCTG +
Preference number: 5 (lower is better)
Translates to: PLVGNGGKAHGPDNV*AGYLVPGGSPTLLL
Trigger: CAGCAGTAAGGTGGGCGATCCACCTGGGACGAGGTACCCTGCCCAAACATTGTCGGGACCGTGGGCCTTCCCTCCATTTCCCACAAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589539.1
CDS-3UTR CAA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGTGGCGATGCCACTGCTaGGCACTGCCATATCACCAC +
Preference number: 5 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPWRCHC*ALPYHH
Trigger: GTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCA...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS GCA 90 bp CAGCTCCTCGGCTCATTGTGGCCCAAGATCCTCAGCCTCACCACCTaGCTTTCATGGCGCATGACCCTTCATGGCACTGTTATTAATGGA +
Preference number: 5 (lower is better)
Translates to: QLLGSLWPKILSLTT*LSWRMTLHGTVING
Trigger: TCCATTAATAACAGTGCCATGAAGGGTCATGCGCCATGAAAGGCAGGTGGTGAGGCTGAGGATCTTGGGCCACAATGAGCCGAGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590140.1
CDS-3UTR CAA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACAGCCAGCTAGCTCTTTaGAGCCGAGTCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LLTKQILWRCHCLALPYHSQLAL*SRVLLP
Trigger: GGGGAGGAGGACTCGGCTCAAAAGAGCTAGCTGGCT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS TCA 90 bp CTGTCGGAAAATCTCTGGGTCTGGGAGATGGTTCCAGGGGATACTTaGTCCCTCTTCGCCATCAGGATCCTCCTCCAACTTCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: LSENLWVWEMVPGDT*SLFAIRILLQLHSQ
Trigger: CTGAGAGTGAAGTTGGAGGAGGATCCTGATGGCGAAGAGGGATCAAGTATCCCCTGGAACCATCTCCCAGACCCAGAGATTTTCCGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589539.1
ENST00000589881.5
ENST00000590140.1
ENST00000593130.1
CDS-3UTR CAA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGACGGAGAGAAACCGGTaGTCCAGGGTCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPTERNR*SRVIKF
Trigger: GAACTTGATGACCCTGGACAACCGGTTTCTCTCCGT...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS CCA 90 bp TCACAGGCACTCAATTTCGCAAGCCCTTTCACGTGCATTATCTTGTaGATCCTCTCAGTAATCCCCTCAGCTCCTCGGCTCATTGTGGCC +
Preference number: 5 (lower is better)
Translates to: SQALNFASPFTCIIL*ILSVIPSAPRLIVA
Trigger: GGCCACAATGAGCCGAGGAGCTGAGGGGATTACTGAGAGGATCCACAAGATAATGCACGTGAAAGGGCTTGCGAAATTGAGTGCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590140.1
CDS-3UTR CAA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCGGTTCCAGGGGATACTaGATCCCTCTTCGCCATCAG +
Preference number: 5 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIGSRGY*IPLRHQ
Trigger: CTGATGGCGAAGAGGGATCAAGTATCCCCTGGAACC...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATAGCCAGCTAGCTCTTTaGAGCCGAGTCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSQLAL*SRVLLP
Trigger: GGGGAGGAGGACTCGGCTCAAAAGAGCTAGCTGGCT...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACACGGAGAGAAACCGGTaGTCCAGGGTCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLTKQILWRCHCLALPYHTERNR*SRVIKF
Trigger: GAACTTGATGACCCTGGACAACCGGTTTCTCTCCGT...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AGTATCGTGGACTCACCTCTGAACACTGGAGAGCCAGCTAGCTCTTTTGAGCCGCATCAAGCTCAGAACTaGGTAATCCCTGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SIVDSPLNTGEPASSFEPHQAQN*VIPELL
Trigger: AAGAAGCTCAGGGATTACCAAGTTCTGAGCTTGATG...CGGCTCAAAAGAGCTAGCTGGCTCTCCAGTGTTCAGAGGTGAGTCCACGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCTTTCAAACCTGCCCTaGGGGAAACAGGTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LLTKQILWRCHCLALPYHLSNLP*GKQVSP
Trigger: TGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAAG...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTGGTTCCAGGGGATACTaGATCCCTCTTCGCCATCAG +
Preference number: 5 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPGSRGY*IPLRHQ
Trigger: CTGATGGCGAAGAGGGATCAAGTATCCCCTGGAACC...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAAGTCTGTAGCTCTTaGGGTAGGATGGCAACAAAC +
Preference number: 5 (lower is better)
Translates to: LLTKQILWRCHCLALPYHQVCSS*GRMATN
Trigger: GTTTGTTGCCATCCTACCCAAAGAGCTACAGACTTG...GTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp ACTCTCTCCACATGGCACAAATTCAGGCTTACATGGTCCTTGGTTCCTGGGATCATAGCCATTGAGAGGTaGCTCCCTTCTTACCTACTC +
Preference number: 5 (lower is better)
Translates to: TLSTWHKFRLTWSLVPGIIAIER*LPSYLL
Trigger: GAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTAT...GATCCCAGGAACCAAGGACCATGTAAGCCTGAATTTGTGCCATGTGGAGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCACATCATTTCCTCTTCTaGTGTGCCACCATCCAGTTT +
Preference number: 5 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPHHFLF*CATIQF
Trigger: AAACTGGATGGTGGCACACAAGAAGAGGAAATGATG...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGTGGCGATGCCACTGCTaGGCACTGCCATATCACCAC +
Preference number: 5 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKWRCHC*ALPYHH
Trigger: GTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCA...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS TCA 90 bp GCAGAATATAAGCCTCAGGGCAATACCCCGTTTTCTTCACAGGCATaGCTTCTTAGAGCAACTTCCAATCCAGCGAGGTCCATTCATGGT +
Preference number: 5 (lower is better)
Translates to: AEYKPQGNTPFSSQA*LLRATSNPARSIHG
Trigger: ACCATGAATGGACCTCGCTGGATTGGAAGTTGCTCTAAGAAGTCATGCCTGTGAAGAAAACGGGGTATTGCCCTGAGGCTTATATTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593130.1
CDS-3UTR CAA 90 bp ACCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCACGGAGAGAAACCGGTaGTCCAGGGTCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: TYSDTRILSFQPSSKYATTERNR*SRVIKF
Trigger: GAACTTGATGACCCTGGACAACCGGTTTCTCTCCGT...GGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTCCCTTATGTTTACATTaGCCTTCAACACTGCCATCC +
Preference number: 5 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTPLCLH*PSTLPS
Trigger: GGATGGCAGTGTTGAAGGCAAATGTAAACATAAGGG...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GACTGCTCATTTGCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTTTATTGGACACTGACTaGTTTCCCCTCAGCCACAAA +
Preference number: 5 (lower is better)
Translates to: DCSFANQTDTLAMPLLGTLLDTD*FPLSHK
Trigger: TTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAA...AGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGCAAATGAGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS GCA 90 bp AGAGTGCCAGGAACTTCATGGGATTCTAATGCTGAAGGAAGCTCCTaGTTTGGAGCTAGTGCTCCATTTTCAGTCCTACCATCATCATCA +
Preference number: 5 (lower is better)
Translates to: RVPGTSWDSNAEGSS*FGASAPFSVLPSSS
Trigger: TGATGATGATGGTAGGACTGAAAATGGAGCACTAGCTCCAAAGCAGGAGCTTCCTTCAGCATTAGAATCCCATGAAGTTCCTGGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261332.11
ENST00000399061.3
CDS-3UTR CAA 90 bp TTGGCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTTCCCAGGATGCCCACTaGAGCTGGTTCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: LAKIFKDSGLADYRQTGISQDAH*SWFSTA
Trigger: TGCTGTGGAGAACCAGCTCAAGTGGGCATCCTGGGA...AATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AGGAGTTTACAGCTTTATTGGACACTGACTTGTTTCCCCTCAGCCACAAAGAGAGTGGACTCTCTGGTGTaGCACAAGAATGGAACTTCG +
Preference number: 5 (lower is better)
Translates to: RSLQLYWTLTCFPSATKRVDSLV*HKNGTS
Trigger: CGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCAC...TCTCTTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAAAGCTGTAAACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTGGTTCCAGGGGATACTaGATCCCTCTTCGCCATCAG +
Preference number: 5 (lower is better)
Translates to: AKIFKDSGLADYRQTGILGSRGY*IPLRHQ
Trigger: CTGATGGCGAAGAGGGATCAAGTATCCCCTGGAACC...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AGCACTTCAAATAGTGCCTGTCACAGCAACCACAGGTGTCAGCTGTTAACACATTCCCTGAGCTTCTTCTaGAGATACCATGTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: STSNSACHSNHRCQLLTHSLSFF*RYHVFY
Trigger: GTAGAAGACATGGTATCTCAAGAAGAAGCTCAGGGA...ATGTGTTAACAGCTGACACCTGTGGTTGCTGTGACAGGCACTATTTGAAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTATCCCAGGATGCCCACTaGAGCTGGTTCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLSQDAH*SWFSTA
Trigger: TGCTGTGGAGAACCAGCTCAAGTGGGCATCCTGGGA...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGAAGGAAGCTCCTGCTTaGGAGCTAGTGCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRKEAPA*ELVLHF
Trigger: AAAATGGAGCACTAGCTCCAAAGCAGGAGCTTCCTT...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGGTGGACTCTCTGGTGTaGCACAAGAATGGAACTTCG +
Preference number: 5 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKVDSLV*HKNGTS
Trigger: CGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCAC...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTCACAGGGAAGCTTCCTaGTATATAGGAACCGCATAC +
Preference number: 5 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPHREAS*YIGTAY
Trigger: GTATGCGGTTCCTATATACAAGGAAGCTTCCCTGTG...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTTGGCGATGCCACTGCTaGGCACTGCCATATCACCAC +
Preference number: 5 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGWRCHC*ALPYHH
Trigger: GTGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCA...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GCTAACCAAACAGATACTCTGGCGATGCCACTGCTTGGCACTGCCATATCACCAAAAATGACTGCTCATTaGCTAACCAAACAGATACTC +
Preference number: 5 (lower is better)
Translates to: ANQTDTLAMPLLGTAISPKMTAH*LTKQIL
Trigger: GAGTATCTGTTTGGTTAGCAAATGAGCAGTCATTTT...TGGTGATATGGCAGTGCCAAGCAGTGGCATCGCCAGAGTATCTGTTTGGTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTTACCAGCTCCAAGATTaGTTCTTTTGTGTGCGTCTC +
Preference number: 5 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPYQLQD*FFCVRL
Trigger: GAGACGCACACAAAAGAACAAATCTTGGAGCTGGTA...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCATCAAGCTCAGAACTaGGTAATCCCTGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRHQAQN*VIPELL
Trigger: AAGAAGCTCAGGGATTACCAAGTTCTGAGCTTGATG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATTCCCAGGATGCCCACTaGAGCTGGTTCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: DQSICISSPIKVFHSLFDSQDAH*SWFSTA
Trigger: TGCTGTGGAGAACCAGCTCAAGTGGGCATCCTGGGA...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCCCTTATGTTTACATTaGCCTTCAACACTGCCATCC +
Preference number: 5 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRPLCLH*PSTLPS
Trigger: GGATGGCAGTGTTGAAGGCAAATGTAAACATAAGGG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGTTATTGGACACTGACTaGTTTCCCCTCAGCCACAAA +
Preference number: 5 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRLLDTD*FPLSHK
Trigger: TTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAA...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TTGCTAAAGATCAAGTACCAACTGGGTATGACTACAGAGAGCTTAACCTCCAAGATAGCCATTGAGAGGTaGCTCCCTTCTTACCTACTC +
Preference number: 5 (lower is better)
Translates to: LLKIKYQLGMTTESLTSKIAIER*LPSYLL
Trigger: GAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTAT...CTTGGAGGTTAAGCTCTCTGTAGTCATACCCAGTTGGTACTTGATCTTTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACCAAGTCTGTAGCTCTTaGGGTAGGATGGCAACAAAC +
Preference number: 5 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNQVCSS*GRMATN
Trigger: GTTTGTTGCCATCCTACCCAAAGAGCTACAGACTTG...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAAAGGAAGCTCCTGCTTaGGAGCTAGTGCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVKEAPA*ELVLHF
Trigger: AAAATGGAGCACTAGCTCCAAAGCAGGAGCTTCCTT...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GCAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTCTTTCAAACCTGCCCTaGGGGAAACAGGTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: AKIFKDSGLADYRQTGILLSNLP*GKQVSP
Trigger: TGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAAG...AAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACGTGGACTCTCTGGTGTaGCACAAGAATGGAACTTCG +
Preference number: 5 (lower is better)
Translates to: EANSHKTANPYDLQWKKYVDSLV*HKNGTS
Trigger: CGAAGTTCCATTCTTGTGCAACACCAGAGAGTCCAC...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACCACAGGGAAGCTTCCTaGTATATAGGAACCGCATAC +
Preference number: 5 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNHREAS*YIGTAY
Trigger: GTATGCGGTTCCTATATACAAGGAAGCTTCCCTGTG...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAACAAGTCTGTAGCTCTTaGGGTAGGATGGCAACAAAC +
Preference number: 5 (lower is better)
Translates to: LASESFLNNADIRAAKTKQVCSS*GRMATN
Trigger: GTTTGTTGCCATCCTACCCAAAGAGCTACAGACTTG...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp ATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTACTAATCTTTCAAACCTGCCCTaGGGGAAACAGGTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IFKDSGLADYRQTGILTNLSNLP*GKQVSP
Trigger: TGGAGAAACCTGTTTCCCCAAGGGCAGGTTTGAAAG...ATTAGTAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp CCTACTCTGATACAAGAATTCTGTCATTCCAGCCGTCTTCCAAATATGCCACCTATCTTATGGTTCATTTaGAGGCTCTTAGCCATCCTT +
Preference number: 5 (lower is better)
Translates to: PTLIQEFCHSSRLPNMPPILWFI*RLLAIL
Trigger: AAGGATGGCTAAGAGCCTCAAAATGAACCATAAGAT...AGGTGGCATATTTGGAAGACGGCTGGAATGACAGAATTCTTGTATCAGAGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACCATCATTTCCTCTTCTaGTGTGCCACCATCCAGTTT +
Preference number: 5 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNHHFLF*CATIQF
Trigger: AAACTGGATGGTGGCACACAAGAAGAGGAAATGATG...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TGGGATCTCCATAAAGCCTTCTTTCCAGTAGTTCCAGCAGAAGTTCTGTTAAGGCAGAGAACAAACCCTTaGATCCAAAAATCCACCTTA +
Preference number: 5 (lower is better)
Translates to: WDLHKAFFPVVPAEVLLRQRTNP*IQKSTL
Trigger: TAAGGTGGATTTTTGGATCAAAGGGTTTGTTCTCTG...CCTTAACAGAACTTCTGCTGGAACTACTGGAAAGAAGGCTTTATGGAGATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GAGGCTAACTCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACTACCAGCTCCAAGATTaGTTCTTTTGTGTGCGTCTC +
Preference number: 5 (lower is better)
Translates to: EANSHKTANPYDLQWKKYYQLQD*FFCVRL
Trigger: GAGACGCACACAAAAGAACAAATCTTGGAGCTGGTA...GTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGAGTTAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAAGGAAGCTCCTGCTTaGGAGCTAGTGCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: KTANPYDLQWKKYLPTYGKEAPA*ELVLHF
Trigger: AAAATGGAGCACTAGCTCCAAAGCAGGAGCTTCCTT...ACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAATTATTGGACACTGACTaGTTTCCCCTCAGCCACAAA +
Preference number: 5 (lower is better)
Translates to: LASESFLNNADIRAAKTKLLDTD*FPLSHK
Trigger: TTTGTGGCTGAGGGGAAACAAGTCAGTGTCCAATAA...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTATAGCCATTGAGAGGTaGCTCCCTTCTTACCTACTC +
Preference number: 5 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTIAIER*LPSYLL
Trigger: GAGTAGGTAAGAAGGGAGCAACCTCTCAATGGCTAT...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTATCCCTGAGCTTCTTCTaGAGATACCATGTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLSLSFF*RYHVFY
Trigger: GTAGAAGACATGGTATCTCAAGAAGAAGCTCAGGGA...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTTCCCTGAGCTTCTTCTaGAGATACCATGTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTSLSFF*RYHVFY
Trigger: GTAGAAGACATGGTATCTCAAGAAGAAGCTCAGGGA...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATCACAGGGAAGCTTCCTaGTATATAGGAACCGCATAC +
Preference number: 5 (lower is better)
Translates to: DQSICISSPIKVFHSLFDHREAS*YIGTAY
Trigger: GTATGCGGTTCCTATATACAAGGAAGCTTCCCTGTG...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AACCTGATACTTGCCCACCTGTCAGGGAATTTTCTGTCCTTAACAAAGATGAAGAGACAAAAACAGTATTaGCCAACCCTCATACTACTT +
Preference number: 5 (lower is better)
Translates to: NLILAHLSGNFLSLTKMKRQKQY*PTLILL
Trigger: AAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTCT...CTTCATCTTTGTTAAGGACAGAAAATTCCCTGACAGGTGGGCAAGTATCAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AAGATTCACAAACTTCCAAATTGTGGTAAGAGTATCGTGGACTCACCTCTGAACCAGAGAACAAACCCTTaGATCCAAAAATCCACCTTA +
Preference number: 5 (lower is better)
Translates to: KIHKLPNCGKSIVDSPLNQRTNP*IQKSTL
Trigger: TAAGGTGGATTTTTGGATCAAAGGGTTTGTTCTCTG...GTTCAGAGGTGAGTCCACGATACTCTTACCACAATTTGGAAGTTTGTGAATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTACATCAAGCTCAGAACTaGGTAATCCCTGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLHQAQN*VIPELL
Trigger: AAGAAGCTCAGGGATTACCAAGTTCTGAGCTTGATG...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAAGACAAAAACAGTATTaGCCAACCCTCATACTACTT +
Preference number: 5 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVRQKQY*PTLILL
Trigger: AAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTCT...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATCATCATTTCCTCTTCTaGTGTGCCACCATCCAGTTT +
Preference number: 5 (lower is better)
Translates to: DQSICISSPIKVFHSLFDHHFLF*CATIQF
Trigger: AAACTGGATGGTGGCACACAAGAAGAGGAAATGATG...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp AGTTTTCCACTAAACAGTAGAACCACAGTACTTGGAATTCTCAGCCAAGGAGTAAAAATGACTGCTCATTaGCTAACCAAACAGATACTC +
Preference number: 5 (lower is better)
Translates to: SFPLNSRTTVLGILSQGVKMTAH*LTKQIL
Trigger: GAGTATCTGTTTGGTTAGCAAATGAGCAGTCATTTT...TACTCCTTGGCTGAGAATTCCAAGTACTGTGGTTCTACTGTTTAGTGGAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TTAGCCTCAGAATCCTTTCTGAACAATGCAGATATTAGAGCTGCCAAGACAAAACAGAGAACAAACCCTTaGATCCAAAAATCCACCTTA +
Preference number: 5 (lower is better)
Translates to: LASESFLNNADIRAAKTKQRTNP*IQKSTL
Trigger: TAAGGTGGATTTTTGGATCAAAGGGTTTGTTCTCTG...TTTTGTCTTGGCAGCTCTAATATCTGCATTGTTCAGAAAGGATTCTGAGGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp ATGATTTACAGTGGAAGAAATACCTACCTACTTATGGTAGGATTACAGTACCTAATCTTATGGTTCATTTaGAGGCTCTTAGCCATCCTT +
Preference number: 5 (lower is better)
Translates to: MIYSGRNTYLLMVGLQYLILWFI*RLLAIL
Trigger: AAGGATGGCTAAGAGCCTCAAAATGAACCATAAGAT...TAGGTACTGTAATCCTACCATAAGTAGGTAGGTATTTCTTCCACTGTAAATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp TCACATAAAACAGCAAACCCCTATGATTTACAGTGGAAGAAATACCTACCTACTAGACAAAAACAGTATTaGCCAACCCTCATACTACTT +
Preference number: 5 (lower is better)
Translates to: SHKTANPYDLQWKKYLPTRQKQY*PTLILL
Trigger: AAGTAGTATGAGGGTTGGCAAATACTGTTTTTGTCT...AGTAGGTAGGTATTTCTTCCACTGTAAATCATAGGGGTTTGCTGTTTTATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp CAAAAATTTTTAAGGATTCAGGGTTGGCAGACTATAGGCAAACAGGCATTCTTAAAAATGACTGCTCATTaGCTAACCAAACAGATACTC +
Preference number: 5 (lower is better)
Translates to: QKFLRIQGWQTIGKQAFLKMTAH*LTKQIL
Trigger: GAGTATCTGTTTGGTTAGCAAATGAGCAGTCATTTT...TAAGAATGCCTGTTTGCCTATAGTCTGCCAACCCTGAATCCTTAAAAATTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS-3UTR CAA 90 bp GATCAAAGTATTTGCATATCTTCCCCAATCAAGGTGTTCCATTCACTTTTTGATTCAGATGATGAGAAGTaGAAAATATCAGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: DQSICISSPIKVFHSLFDSDDEK*KISAPY
Trigger: ATATGGGGCTGATATTTTCAACTTCTCATCATCTGA...ATCAAAAAGTGAATGGAACACCTTGATTGGGGAAGATATGCAAATACTTTGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589881.5
CDS GCA 72 bp GGTACCTCGTCCCAGGTGGATCGCCCACCTTACTGCTaGATAGACCTGCTGTGTATCCCGGCCCCGGCCCCG +
Preference number: 6 (lower is better)
Translates to: GTSSQVDRPPYC*IDLLCIPAPAP
Trigger: CGGGGCCGGGGCCGGGATACACAGCAGGTCTATGCAGCAGTAAGGTGGGCGATCCACCTGGGACGAGGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589539.1
CDS GCA 72 bp CAGGGTACCTCGTCCCAGGTGGATCGCCCACCTTACTaGTGCATAGACCTGCTGTGTATCCCGGCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: QGTSSQVDRPPY*CIDLLCIPAPA
Trigger: GGCCGGGGCCGGGATACACAGCAGGTCTATGCAGCAGTAAGGTGGGCGATCCACCTGGGACGAGGTACCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589539.1
CDS CCA 72 bp GGAAATGGAGGGAAGGCCCACGGTCCCGACAATGTTTaGGCAGGGTACCTCGTCCCAGGTGGATCGCCCACC +
Preference number: 6 (lower is better)
Translates to: GNGGKAHGPDNV*AGYLVPGGSPT
Trigger: GGTGGGCGATCCACCTGGGACGAGGTACCCTGCCCAAACATTGTCGGGACCGTGGGCCTTCCCTCCATTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589539.1
CDS CAA 72 bp GGGAAATGGAGGGAAGGCCCACGGTCCCGACAATGTTaGGGCAGGGTACCTCGTCCCAGGTGGATCGCCCAC +
Preference number: 6 (lower is better)
Translates to: GKWREGPRSRQC*GRVPRPRWIAH
Trigger: GTGGGCGATCCACCTGGGACGAGGTACCCTGCCCAAACATTGTCGGGACCGTGGGCCTTCCCTCCATTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589539.1
CDS CAA 90 bp TCCGCTTGTGGGAAATGGAGGGAAGGCCCACGGTCCCGACAATGTTaGGGCAGGGTACCTCGTCCCAGGTGGATCGCCCACCTTACTGCT +
Preference number: 6 (lower is better)
Translates to: SACGKWREGPRSRQC*GRVPRPRWIAHLTA
Trigger: AGCAGTAAGGTGGGCGATCCACCTGGGACGAGGTACCCTGCCCAAACATTGTCGGGACCGTGGGCCTTCCCTCCATTTCCCACAAGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589539.1
CDS CCA 72 bp CCCCGTTTTCTTCACAGGCACTCCGCTTGTGGGAAATaGAGGGAAGGCCCACGGTCCCGACAATGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: PRFLHRHSACGK*REGPRSRQCLG
Trigger: GCCCAAACATTGTCGGGACCGTGGGCCTTCCCTCCATTTCCCACAAGCGGAGTGCCTGTGAAGAAAACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589539.1
CDS TCA 72 bp AGTGCCTTAGGGAATGGAGCTCCCAGGATGCCCACTTaGGCTGGTTCTCCACAGCATCAAGCTCAGAACTTG +
Preference number: 6 (lower is better)
Translates to: SALGNGAPRMPT*AGSPQHQAQNL
Trigger: CAAGTTCTGAGCTTGATGCTGTGGAGAACCAGCTCAAGTGGGCATCCTGGGAGCTCCATTCCCTAAGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589881.5
CDS CAA 90 bp GCTGTCGGAAAATCTCTGGGTCTGGGAGATGGTTCCAGGGGATACTaGATCCCTCTTCGCCATCAGGATCCTCCTCCAACTTCACTCTCA +
Preference number: 6 (lower is better)
Translates to: AVGKSLGLGDGSRGY*IPLRHQDPPPTSLS
Trigger: TGAGAGTGAAGTTGGAGGAGGATCCTGATGGCGAAGAGGGATCAAGTATCCCCTGGAACCATCTCCCAGACCCAGAGATTTTCCGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589539.1
ENST00000589881.5
ENST00000590140.1
ENST00000593130.1
CDS CAA 72 bp AAATCTCTGGGTCTGGGAGATGGTTCCAGGGGATACTaGATCCCTCTTCGCCATCAGGATCCTCCTCCAACT +
Preference number: 6 (lower is better)
Translates to: KSLGLGDGSRGY*IPLRHQDPPPT
Trigger: AGTTGGAGGAGGATCCTGATGGCGAAGAGGGATCAAGTATCCCCTGGAACCATCTCCCAGACCCAGAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261332.11
ENST00000399061.3
ENST00000589539.1
ENST00000589881.5
ENST00000590140.1
ENST00000593130.1
CDS TCA 72 bp AAGCCTCAGGGCAATACCCCGTTTTCTTCACAGGCATaGCTTCTTAGAGCAACTTCCAATCCAGCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: KPQGNTPFSSQA*LLRATSNPARS
Trigger: GGACCTCGCTGGATTGGAAGTTGCTCTAAGAAGTCATGCCTGTGAAGAAAACGGGGTATTGCCCTGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593130.1
CDS CCA 72 bp CTCAATTTCGCAAGCCCTTTCACGTGCATTATCTTGTaGATCCTCTCAGTAATCCCCTCAGCTCCTCGGCTC +
Preference number: 6 (lower is better)
Translates to: LNFASPFTCIIL*ILSVIPSAPRL
Trigger: GAGCCGAGGAGCTGAGGGGATTACTGAGAGGATCCACAAGATAATGCACGTGAAAGGGCTTGCGAAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590140.1
CDS CAA 72 bp GCACTCAATTTCGCAAGCCCTTTCACGTGCATTATCTaGTGGATCCTCTCAGTAATCCCCTCAGCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: ALNFASPFTCII*WILSVIPSAPR
Trigger: CCGAGGAGCTGAGGGGATTACTGAGAGGATCCACAAGATAATGCACGTGAAAGGGCTTGCGAAATTGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590140.1
CDS CAA 90 bp TCTTCACAGGCACTCAATTTCGCAAGCCCTTTCACGTGCATTATCTaGTGGATCCTCTCAGTAATCCCCTCAGCTCCTCGGCTCATTGTG +
Preference number: 6 (lower is better)
Translates to: SSQALNFASPFTCII*WILSVIPSAPRLIV
Trigger: CACAATGAGCCGAGGAGCTGAGGGGATTACTGAGAGGATCCACAAGATAATGCACGTGAAAGGGCTTGCGAAATTGAGTGCCTGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590140.1
CDS GCA 72 bp TCTTCACAGGCACTCAATTTCGCAAGCCCTTTCACGTaGATTATCTTGTGGATCCTCTCAGTAATCCCCTCA +
Preference number: 6 (lower is better)
Translates to: SSQALNFASPFT*IILWILSVIPS
Trigger: TGAGGGGATTACTGAGAGGATCCACAAGATAATGCACGTGAAAGGGCTTGCGAAATTGAGTGCCTGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590140.1
CDS CCA 72 bp TCAGATGTGAAGAAAACCTGCTCAGACCTCATTCAGTaGCATACCAGCACCATCTCCAACTACTTCAAGGAA +
Preference number: 6 (lower is better)
Translates to: SDVKKTCSDLIQ*HTSTISNYFKE
Trigger: TTCCTTGAAGTAGTTGGAGATGGTGCTGGTATGCCACTGAATGAGGTCTGAGCAGGTTTTCTTCACATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589881.5