RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF236 (Homo sapiens)

Ensembl gene IDs: ENSG00000130856

Ensembl transcript IDs: ENST00000253159.12, ENST00000320610.14, ENST00000543926.6, ENST00000579322.1, ENST00000583095.1, ENST00000583488.1, ENST00000645888.1

Found 1338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCACCGCCGCCGATGAGAAGGCGCGGTCACACTCCAGGCACTGGTaGGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTC +
Preference number: 1 (lower is better)
Translates to: STAADEKARSHSRHW*ARPSFSGWLPGARF
Trigger: GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 90 bp ATGAGCACCGCCGCCGATGAGAAGGCGCGGTCACACTCCAGGCACTaGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: MSTAADEKARSHSRH*CARPSFSGWLPGAR
Trigger: CCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 90 bp CCGGCCATGCACCTCCTTGCTGTGGTGCATGAGCACCGCCGCCGATaGGAAGGCGCGGTCACACTCCAGGCACTGGTGCGCCCGGCCCTC +
Preference number: 1 (lower is better)
Translates to: PAMHLLAVVHEHRRR*EGAVTLQALVRPAL
Trigger: GAGGGCCGGGCGCACCAGTGCCTGGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 90 bp GGGCAGCCGTGGATGCGCTCCCGGCCATGCACCTCCTTGCTGTGGTaGATGAGCACCGCCGCCGATGAGAAGGCGCGGTCACACTCCAGG +
Preference number: 1 (lower is better)
Translates to: GQPWMRSRPCTSLLW*MSTAADEKARSHSR
Trigger: CCTGGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCATCCACGGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 90 bp ACGGGGCAGCCGTGGATGCGCTCCCGGCCATGCACCTCCTTGCTGTaGTGCATGAGCACCGCCGCCGATGAGAAGGCGCGGTCACACTCC +
Preference number: 1 (lower is better)
Translates to: TGQPWMRSRPCTSLL*CMSTAADEKARSHS
Trigger: GGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCATCCACGGCTGCCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 90 bp CACACTCCAGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTaGCCGGGGCCAGGTTCCCAGAGACGCCAGCTACCTGGTAGGCTA +
Preference number: 1 (lower is better)
Translates to: HTPGTGAPGPPSLAG*PGPGSQRRQLPGRL
Trigger: TAGCCTACCAGGTAGCTGGCGTCTCTGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 90 bp AGCCGTGGATGCGCTCCCGGCCATGCACCTCCTTGCTGTGGTGCATaGGCACCGCCGCCGATGAGAAGGCGCGGTCACACTCCAGGCACT +
Preference number: 1 (lower is better)
Translates to: SRGCAPGHAPPCCGA*APPPMRRRGHTPGT
Trigger: AGTGCCTGGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCATCCACGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 90 bp AAGGCCTTCCTGCACACGGGGCAGCCGTGGATGCGCTCCCGGCCATaGACCTCCTTGCTGTGGTGCATGAGCACCGCCGCCGATGAGAAG +
Preference number: 1 (lower is better)
Translates to: KAFLHTGQPWMRSRP*TSLLWCMSTAADEK
Trigger: CTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCATCCACGGCTGCCCCGTGTGCAGGAAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 90 bp CAAGCAGCAGACGCTGACTGTGGCGTGTGGCTCACTAGTATGACTTaGGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTG +
Preference number: 1 (lower is better)
Translates to: QAADADCGVWLTSMT*GEPAPPWPEREGSV
Trigger: CACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 90 bp GGTGAGTGTGTGAGGGTGAGGGTGAGCTATGTGCTCATCCGTGCATaGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACCA +
Preference number: 1 (lower is better)
Translates to: GECVRVRVSYVLIRA*GSEEGNPFGEGQPP
Trigger: TGGTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGAGCACATAGCTCACCCTCACCCTCACACACTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR TCA 90 bp TGTGAGGGTGAGGGTGAGCTATGTGCTCATCCGTGCATGGGGGTCTaGGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACCAAACAGGAC +
Preference number: 1 (lower is better)
Translates to: CEGEGELCAHPCMGV*GGESVRRGPATKQD
Trigger: GTCCTGTTTGGTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGAGCACATAGCTCACCCTCACCCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR TCA 90 bp CTTCACAAGCAGCAGACGCTGACTGTGGCGTGTGGCTCACTAGTATaGCTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGAT +
Preference number: 1 (lower is better)
Translates to: LHKQQTLTVACGSLV*LAASLLHPGPRERD
Trigger: ATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 90 bp AACATTCTTAAAGGTGTACTTCCAACTCGCATCAGAAGACGTGGGTaGGGGCCTGCCACTCGCCGGCGGCCTCCTGCACCACCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: NILKGVLPTRIRRRG*GPATRRRPPAPPPP
Trigger: TGGAGGAGGTGGTGCAGGAGGCCGCCGGCGAGTGGCAGGCCCTCACCCACGTCTTCTGATGCGAGTTGGAAGTACACCTTTAAGAATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 90 bp ACACTAGCGTCACCTCCCACGCCCGACGAGGACATGACCAGGTTCTaGGTCGAGATGGCCGATGGAGACATCGGTGTTGTTGAAGGAAGG +
Preference number: 1 (lower is better)
Translates to: TLASPPTPDEDMTRF*VEMADGDIGVVEGR
Trigger: CCTTCCTTCAACAACACCGATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTGGGAGGTGACGCTAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 90 bp GCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACATaGCTCCTGCTTCCTCAGTACCTGCACCCCACCTTCACGTTTGGT +
Preference number: 1 (lower is better)
Translates to: AAWALSSRWDSTHAT*LLLPQYLHPTFTFG
Trigger: ACCAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCAGGAGGCATGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR GCA 90 bp GCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTaGAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGC +
Preference number: 1 (lower is better)
Translates to: ASYLLGWTGPPLLAP*RRFCGFLPAMYGLC
Trigger: GCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp GGTAAGTGTGTCGCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTaGGTCAGGTTTACTCGAGTCCCCATGTTGACGCCCCAGATACTG +
Preference number: 1 (lower is better)
Translates to: GKCVASPCGQLNPYW*VRFTRVPMLTPQIL
Trigger: CAGTATCTGGGGCGTCAACATGGGGACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGCGACACACTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp TGCGGTAAGTGTGTCGCCAGCCCGTGTGGACAGCTGAATCCTTATTaGTGGGTCAGGTTTACTCGAGTCCCCATGTTGACGCCCCAGATA +
Preference number: 1 (lower is better)
Translates to: CGKCVASPCGQLNPY*WVRFTRVPMLTPQI
Trigger: TATCTGGGGCGTCAACATGGGGACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGCGACACACTTACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp GGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTaGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGT +
Preference number: 1 (lower is better)
Translates to: GVDRATVACSLQTVL*FPTCDVWLVLLQLC
Trigger: ACATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp CGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTaGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCT +
Preference number: 1 (lower is better)
Translates to: RPLPCMYAAVALQLA*FGKCLLTSVTFKHS
Trigger: AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 90 bp CAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTaGTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGG +
Preference number: 1 (lower is better)
Translates to: QICFLFAGVDRATVA*SLQTVLWFPTCDVW
Trigger: CCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 90 bp GCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGT +
Preference number: 1 (lower is better)
Translates to: ATDMLLICWGGQGHR*LLLADGSVVSYLRC
Trigger: ACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 90 bp GGGCATTATCTAGCAGGTGGGACTCCACACATGCTACATGCCTCCTaGTTCCTCAGTACCTGCACCCCACCTTCACGTTTGGTATCTTTG +
Preference number: 1 (lower is better)
Translates to: GHYLAGGTPHMLHAS*FLSTCTPPSRLVSL
Trigger: CAAAGATACCAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCAGGAGGCATGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 90 bp GGATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTaGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGT +
Preference number: 1 (lower is better)
Translates to: GFVALSYRYASYLLG*TGPPLLAPCRRFCG
Trigger: ACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp TTGCCATTCTATGGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTaGGACTCCACACATGCTACATGCCTCCTGCTTCCTCAGTACCTG +
Preference number: 1 (lower is better)
Translates to: LPFYGNAAAWALSSR*DSTHATCLLLPQYL
Trigger: CAGGTACTGAGGAAGCAGGAGGCATGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCCATAGAATGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 90 bp GCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTTGGCTTCTaGGAGCTCAAAGAGGGGCCGGCCTGGTGTGTCTGCATGTGCTCC +
Preference number: 1 (lower is better)
Translates to: ANAFSQVSHLNTLGF*ELKEGPAWCVCMCS
Trigger: GGAGCACATGCAGACACACCAGGCCGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 90 bp GGCTTGTGCTTCTGCAATTATGTAACCCTGGACCTGAACACAGATTaGTGCGGTAAGTGTGTCGCCAGCCCGTGTGGACAGCTGAATCCT +
Preference number: 1 (lower is better)
Translates to: GLCFCNYVTLDLNTD*CGKCVASPCGQLNP
Trigger: AGGATTCAGCTGTCCACACGGGCTGGCGACACACTTACCGCATCAATCTGTGTTCAGGTCCAGGGTTACATAATTGCAGAAGCACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 90 bp GCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTaGGATGTATGGCTTGTGCTTCTGCAATTATGTAACCCTGGACCT +
Preference number: 1 (lower is better)
Translates to: ATVACSLQTVLWFPT*DVWLVLLQLCNPGP
Trigger: AGGTCCAGGGTTACATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 90 bp AACCTTCCATCTTTGGAATGCTGTAGGAATGGCGTGCACGCACTCTaGCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTGGC +
Preference number: 1 (lower is better)
Translates to: NLPSLECCRNGVHAL*PARVGFGLGHVLCG
Trigger: GCCACATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAAAGATGGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 90 bp GGTGGGACTCCACACATGCTACATGCCTCCTGCTTCCTCAGTACCTaGACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATT +
Preference number: 1 (lower is better)
Translates to: GGTPHMLHASCFLST*TPPSRLVSLQRQFI
Trigger: AATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCAGGAGGCATGTAGCATGTGTGGAGTCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 90 bp GGCAAGCCACACCATGACAAAGAACATGTCTCTGCTAGGAATATGTaGGCATCTGGCCCACGAAAAGCTCTGTGGTTCCCACTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: GKPHHDKEHVSARNM*ASGPRKALWFPLSP
Trigger: TGGAGAAAGTGGGAACCACAGAGCTTTTCGTGGGCCAGATGCCCACATATTCCTAGCAGAGACATGTTCTTTGTCATGGTGTGGCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 90 bp TGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTTaGCTTCTGGGAGCTCAAAGAGGGGCCGGCCTGGTGTGTCTGCAT +
Preference number: 1 (lower is better)
Translates to: WFGKCLLTSVTFKHS*LLGAQRGAGLVCLH
Trigger: ATGCAGACACACCAGGCCGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 90 bp TGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGGCAAATaGCTTCTCACAAGTGTCACATTTAAACACTCTTGGCTTCTGGGA +
Preference number: 1 (lower is better)
Translates to: CMYAAVALQLAWFGK*LLTSVTFKHSWLLG
Trigger: TCCCAGAAGCCAAGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 90 bp GCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTATGTAACCCTGGACCTGAACACAGA +
Preference number: 1 (lower is better)
Translates to: ACSLQTVLWFPTCDV*LVLLQLCNPGPEHR
Trigger: TCTGTGTTCAGGTCCAGGGTTACATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp CTGTCAGGAAGAGGAGAGTGGCATTTGATGAGCCTCCCACTGACCTaGCTGCAAGCTGTCAGATGCCATGTCATAGCATTTCCTCTATTT +
Preference number: 1 (lower is better)
Translates to: LSGRGEWHLMSLPLT*LQAVRCHVIAFPLF
Trigger: AAATAGAGGAAATGCTATGACATGGCATCTGACAGCTTGCAGCCAGGTCAGTGGGAGGCTCATCAAATGCCACTCTCCTCTTCCTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 90 bp TACATGCCTCCTGCTTCCTCAGTACCTGCACCCCACCTTCACGTTTaGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTC +
Preference number: 1 (lower is better)
Translates to: YMPPASSVPAPHLHV*YLCKGNSFFQLQCF
Trigger: GAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCAGGAGGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 90 bp TGTCTTCATTTTCATCTATTGCCATTCTATGGAAACGCAGCCGCTTaGGCATTATCTAGCAGGTGGGACTCCACACATGCTACATGCCTC +
Preference number: 1 (lower is better)
Translates to: CLHFHLLPFYGNAAA*ALSSRWDSTHATCL
Trigger: GAGGCATGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCCATAGAATGGCAATAGATGAAAATGAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR GCA 90 bp CCTGCTTCCTCAGTACCTGCACCCCACCTTCACGTTTGGTATCTTTaGAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTACT +
Preference number: 1 (lower is better)
Translates to: PASSVPAPHLHVWYL*KGNSFFQLQCFMVT
Trigger: AGTAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 90 bp ATGCCAGCTCAGTGGCCTTTGGCGTACGATCTTTTCATTAGAATATaGGAAAGGTGTAGAGGCCCCAAGTACAGATACGACATTAAATTG +
Preference number: 1 (lower is better)
Translates to: MPAQWPLAYDLFIRI*ERCRGPKYRYDIKL
Trigger: CAATTTAATGTCGTATCTGTACTTGGGGCCTCTACACCTTTCCCATATTCTAATGAAAAGATCGTACGCCAAAGGCCACTGAGCTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR TCA 90 bp AATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTaGCATTCAAGGAAGGAAACCTCCGGATTGGTAAGAAGTCCAGTA +
Preference number: 1 (lower is better)
Translates to: NYSYSAYAATARFTH*HSRKETSGLVRSPV
Trigger: TACTGGACTTCTTACCAATCCGGAGGTTTCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp GCAGGATCAAAACACTTAGGAACTTTCAAAAGGTTCCTCAATGACTaGGTGCCGTTGAATAAAGCAGCAAATGAAAGGGAACAGGAACAG +
Preference number: 1 (lower is better)
Translates to: AGSKHLGTFKRFLND*VPLNKAANEREQEQ
Trigger: CTGTTCCTGTTCCCTTTCATTTGCTGCTTTATTCAACGGCACCCAGTCATTGAGGAACCTTTTGAAAGTTCCTAAGTGTTTTGATCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR GCA 90 bp AGCAGAACCTTTAAAACTCTAGCACAATTACAGTTATTCTGCATATaGGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAAAC +
Preference number: 1 (lower is better)
Translates to: SRTFKTLAQLQLFCI*GYSQVYTLTFKEGN
Trigger: GTTTCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAGAGTTTTAAAGGTTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 90 bp GGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATaGTTACTTGAGCACACAAGCAGGATCAAAACACTTAGGAACTTT +
Preference number: 1 (lower is better)
Translates to: GIFAKAIHSFSFSAS*LLEHTSRIKTLRNF
Trigger: AAAGTTCCTAAGTGTTTTGATCCTGCTTGTGTGCTCAAGTAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR GCA 90 bp ATTAAAAGCAGAACCTTTAAAACTCTAGCACAATTACAGTTATTCTaGATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAA +
Preference number: 1 (lower is better)
Translates to: IKSRTFKTLAQLQLF*ICGYSQVYTLTFKE
Trigger: TTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAGAGTTTTAAAGGTTCTGCTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR TCA 90 bp TGTGTAGCTGTGCTAACACATGCGTCTCTTGTAATAAATGTGATATaGGTTCAAAGGAAGACACAGAACACTAGCTATAATTTCAAAGAT +
Preference number: 1 (lower is better)
Translates to: CVAVLTHASLVINVI*VQRKTQNTSYNFKD
Trigger: ATCTTTGAAATTATAGCTAGTGTTCTGTGTCTTCCTTTGAACTCATATCACATTTATTACAAGAGACGCATGTGTTAGCACAGCTACACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CAA 90 bp CTGCACACGGGGCAGCCGTGGATGCGCTCCCGGCCATGCACCTCCTaGCTGTGGTGCATGAGCACCGCCGCCGATGAGAAGGCGCGGTCA +
Preference number: 2 (lower is better)
Translates to: LHTGQPWMRSRPCTS*LWCMSTAADEKARS
Trigger: TGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCATCCACGGCTGCCCCGTGTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGCCGGCCCTCCTTCTCTaGCTGGTTGCCCGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLPALLL*LVARGQ
Trigger: CTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGG...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGGTGCGTGGCGCGCTTaGAGGCCTTCCTGCACACGG +
Preference number: 2 (lower is better)
Translates to: AGVDRATVACSLQTVLWFGAWRA*RPSCTR
Trigger: CCGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGAGCACCGCCGCCGATaGGAAGGCGCGGTCACACTC +
Preference number: 2 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLEHRRR*EGAVTL
Trigger: GAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp TCATCCGTGCATGGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACATGCTACATGCCTCCTaGTTCCTCAGTACCTGCACC +
Preference number: 2 (lower is better)
Translates to: SSVHGGLRRGIRSERASHMLHAS*FLSTCT
Trigger: GGTGCAGGTACTGAGGAAGCAGGAGGCATGTAGCAT...GTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAATGTGCTCCTTGAGGTaGGTGGCGCGCTTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLMCSLR*VARLKA
Trigger: GGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACAT...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGCGTGCACGCACTCTaGCCAGCACGGGTGGGATTT +
Preference number: 2 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYGVHAL*PARVGF
Trigger: AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGACCTCCTTGCTGTGGTaGATGAGCACCGCCGCCGAT +
Preference number: 2 (lower is better)
Translates to: CFLFAGVDRATVACSLQTTSLLW*MSTAAD
Trigger: ATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGT...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGTGTCATGGAGAGAATTaGTCCAGCCATCTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: GHCADAHGSLSRSHALILCHGEN*SSHLSR
Trigger: CCTTGAGAGATGGCTGGACCAATTCTCTCCATGACA...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp TCATCCGTGCATGGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACGCCAGGTTTACACACTaGCATTCAAGGAAGGAAACC +
Preference number: 2 (lower is better)
Translates to: SSVHGGLRRGIRSERASHARFTH*HSRKET
Trigger: GGTTTCCTTCCTTGAATGTCAGTGTGTAAACCTGGC...GTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGT +
Preference number: 2 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYGQGHR*LLLADG
Trigger: ACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGCAGTTATTCTGCATATaGGGCTACAGCCAGGTTTAC +
Preference number: 2 (lower is better)
Translates to: GHCADAHGSLSRSHALILQLFCI*GYSQVY
Trigger: GTAAACCTGGCTGTAGCCGCATATGCAGAATAACTG...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAGGCCGCTCCCCCGTGTaGTTCTTCATGTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: SIAVRPLHVQLHVALLREGRSPV*FFMCTC
Trigger: GCAGGTGCACATGAAGAAGCACACGGGGGAGCGGCC...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTGTCGCCAGCCCGTGTaGACAGCTGAATCCTTATTG +
Preference number: 2 (lower is better)
Translates to: AGVDRATVACSLQTVLWFCRQPV*TAESLL
Trigger: CAATAAGGATTCAGCTGTCCACACGGGCTGGCGACA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGCCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTA +
Preference number: 2 (lower is better)
Translates to: GHCADAHGSLSRSHALILPTCDV*LVLLQL
Trigger: TAATTGCAGAAGCACAAGCCATACATCGCAGGTAGG...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGATCCGTGAGGAGCGCTaGGAACTGCTGACCCTGAGA +
Preference number: 2 (lower is better)
Translates to: CFLFAGVDRATVACSLQTIREER*ELLTLR
Trigger: TCTCAGGGTCAGCAGTTCCCAGCGCTCCTCACGGAT...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGCCAGATAGCATACCCTaGGTATCGGCCAGCGTCAGC +
Preference number: 2 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPPDSIP*VSASVS
Trigger: GCTGACGCTGGCCGATACTCAGGGTATGCTATCTGG...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGCTCACTAGTATGACTTaGGGCGAGCCTGCTCCACCC +
Preference number: 2 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPLTSMT*GEPAPP
Trigger: GGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAG...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp TCATCCGTGCATGGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACCAGCTCAGTGGCCTTTaGCGTACGATCTTTTCATTA +
Preference number: 2 (lower is better)
Translates to: SSVHGGLRRGIRSERASHQLSGL*RTIFSL
Trigger: TAATGAAAAGATCGTACGCCAAAGGCCACTGAGCTG...GTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCCCCTCCTTCTCTGGCTaGTTGCCCGGGGCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAPSFSG*LPGARF
Trigger: GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGG...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATGCACCTCCTTGCTGTaGTGCATGAGCACCGCCGCC +
Preference number: 2 (lower is better)
Translates to: LADGSVVSYLRCMACASACTSLL*CMSTAA
Trigger: GGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGGACATGACCAGGTTCTaGGTCGAGATGGCCGATGGA +
Preference number: 2 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLDMTRF*VEMADG
Trigger: TCCATCGGCCATCTCGACTCAGAACCTGGTCATGTC...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CAA 90 bp TCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGAGTGGCATTaGATGAGCCTCCCACTGACCTGGCTGCAAGCTGTCAGATGCCAT +
Preference number: 2 (lower is better)
Translates to: SCPTSRTLSGRGEWH*MSLPLTWLQAVRCH
Trigger: ATGGCATCTGACAGCTTGCAGCCAGGTCAGTGGGAGGCTCATCAAATGCCACTCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAAGCCACGGAGGAGACTaGGGAGGAAACTGCCTACAG +
Preference number: 2 (lower is better)
Translates to: LADGSVVSYLRCMACASASHGGD*GGNCLQ
Trigger: CTGTAGGCAGTTTCCTCCTCAGTCTCCTCCGTGGCT...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGCCCGTGTGGACAGCTaGATCCTTATTGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYARVDS*ILIGGS
Trigger: TGACCCACCAATAAGGATTCAGCTGTCCACACGGGC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACAGACCTGAACACAGATTaGTGCGGTAAGTGTGTCGCC +
Preference number: 2 (lower is better)
Translates to: GNAAAWALSSRWDSTHATDLNTD*CGKCVA
Trigger: GGCGACACACTTACCGCATCAATCTGTGTTCAGGTC...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATATCAGAAGACGTGGGTaGGGGCCTGCCACTCGCCGG +
Preference number: 2 (lower is better)
Translates to: CSWGGETDALSAIRTSTYIRRRG*GPATRR
Trigger: CCGGCGAGTGGCAGGCCCTCACCCACGTCTTCTGAT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTGTCGCCAGCCCGTGTaGACAGCTGAATCCTTATTG +
Preference number: 2 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYCRQPV*TAESLL
Trigger: CAATAAGGATTCAGCTGTCCACACGGGCTGGCGACA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACATCTTATTTGCTGGGGTaGACAGGGCCACCGTTGCTT +
Preference number: 2 (lower is better)
Translates to: GNAAAWALSSRWDSTHATSYLLG*TGPPLL
Trigger: AAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGA...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGATCTGAAGTGCTCGTaGGGAGGTGAAACTGACGCT +
Preference number: 2 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYDLKCS*GGETDA
Trigger: AGCGTCAGTTTCACCTCCCCACGAGCACTTCAGATC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGGCTGACTGTGGCGTGTaGCTCACTAGTATGACTTGC +
Preference number: 2 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLADCGV*LTSMTC
Trigger: GCAAGTCATACTAGTGAGCCACACGCCACAGTCAGC...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CAA 90 bp AGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTaGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATG +
Preference number: 2 (lower is better)
Translates to: SYRYASYLLGWTGPP*LAPCRRFCGFLPAM
Trigger: CATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 90 bp CGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTaGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTTGGC +
Preference number: 2 (lower is better)
Translates to: RSPVCMRLWRSSWLG*ANAFSQVSHLNTLG
Trigger: GCCAAGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGCGATGTATGGCTTGTaGTTCTGCAATTATGTAACC +
Preference number: 2 (lower is better)
Translates to: AGVDRATVACSLQTVLWFAMYGL*FCNYVT
Trigger: GGTTACATAATTGCAGAAGCACAAGCCATACATCGC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGATATGCTTCTTATTTaGTGGGGTGGACAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMDMLLI*WGGQGH
Trigger: GTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCACTCCAGGCACTGGTaGGCCCGGCCCTCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLHSRHW*ARPSFS
Trigger: AGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAACGTGGGTGAGGGCCTaGCACTCGCCGGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVTWVRA*HSPAAS
Trigger: GGAGGCCGCCGGCGAGTGGCAGGCCCTCACCCACGT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTGAGCCTGCTCCACCCTaGCCCGAGAGAGAGGGATCC +
Preference number: 2 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSEPAPP*PEREGS
Trigger: GGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CAA 90 bp ACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTaGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATG +
Preference number: 2 (lower is better)
Translates to: TDMLLICWGGQGHRC*LLADGSVVSYLRCM
Trigger: CATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 90 bp GGTTTTTACGGATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTaGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGG +
Preference number: 2 (lower is better)
Translates to: GFYGFVALSYRYASY*LGWTGPPLLAPCRR
Trigger: CCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAATCCGTAAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 90 bp GCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTaGGTTTGGGACATGTTTTATGTGGCACCATTGACGATACTAAAG +
Preference number: 2 (lower is better)
Translates to: AVGMACTHSAQHGWD*VWDMFYVAPLTILK
Trigger: CTTTAGTATCGTCAATGGTGCCACATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAGCCCGTGTGGACAGCTaGATCCTTATTGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEARVDS*ILIGGS
Trigger: TGACCCACCAATAAGGATTCAGCTGTCCACACGGGC...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACAAATACAATACTGATCTaGAGTGCTCGTGGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GNAAAWALSSRWDSTHATNTILI*SARGEV
Trigger: CACCTCCCCACGAGCACTTCAGATCAGTATTGTATT...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCCACAGGGCACTGTGCTaGCGCCCACGGCTCGCTGTC +
Preference number: 2 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFHRALC*RPRLAV
Trigger: GACAGCGAGCCGTGGGCGTCAGCACAGTGCCCTGTG...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTGTCATGGAGAGAATTaGTCCAGCCATCTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMCHGEN*SSHLSR
Trigger: CCTTGAGAGATGGCTGGACCAATTCTCTCCATGACA...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTCACAAAGCGTGCAATaGAACGGCCGCTCCCCTGTA +
Preference number: 2 (lower is better)
Translates to: IRGLKLQICFLFAGVDRASQSVQ*NGRSPV
Trigger: TACAGGGGAGCGGCCGTTCCATTGCACGCTTTGTGA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCAGTTAATTGCTTCGTaGACTAGACACACTAGCCAC +
Preference number: 2 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVQLIAS*TRHTSH
Trigger: GTGGCTAGTGTGTCTAGTTCACGAAGCAATTAACTG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGACGCCCGACGAGGACATaGCCAGGTTCTGAGTCGAGA +
Preference number: 2 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGRPTRT*PGSESR
Trigger: TCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCG...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAAGAGAGAGGGATCCGTaGGGAGCGCTGGGAACTGCT +
Preference number: 2 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGRERDP*GALGTA
Trigger: AGCAGTTCCCAGCGCTCCTCACGGATCCCTCTCTCT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCCTTGCTGTGGTGCATaGGCACCGCCGCCGATGAGA +
Preference number: 2 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGPCCGA*APPPMR
Trigger: TCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATAGGGCCACCGTTGCTTaGTCCTTGCAGACGGTTCTG +
Preference number: 2 (lower is better)
Translates to: CSWGGETDALSAIRTSTYRATVA*SLQTVL
Trigger: CAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGT +
Preference number: 2 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGGQGHR*LLLADG
Trigger: ACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAGCTGTCGCGGAGCCATaGCCTGATTTTGAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEAVAEP*PDFESL
Trigger: CAGACTTTCAAAATCAGGGCATGGCTCCGCGACAGC...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGTATGTATGCGGCTGTaGCGCTCCAGCTGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYVCMRL*RSSWLG
Trigger: ACCAAGCCAGCTGGAGCGCCACAGCCGCATACATAC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CAA 90 bp AGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTaGGGACATGTTTTATGTGGCACCATTGACGATACTAAAGAATTC +
Preference number: 2 (lower is better)
Translates to: RNGVHALCPARVGFG*GHVLCGTIDDTKEF
Trigger: GAATTCTTTAGTATCGTCAATGGTGCCACATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAAGCCACGGAGGAGACTaGGGAGGAAACTGCCTACAG +
Preference number: 2 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGSHGGD*GGNCLQ
Trigger: CTGTAGGCAGTTTCCTCCTCAGTCTCCTCCGTGGCT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGCCCGTGTGGACAGCTaGATCCTTATTGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYARVDS*ILIGGS
Trigger: TGACCCACCAATAAGGATTCAGCTGTCCACACGGGC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATAACGGAGATTCCAAGTaGTTTGCTCTTCACAAAACG +
Preference number: 2 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYNGDSK*FALHKT
Trigger: CGTTTTGTGAAGAGCAAAGCACTTGGAATCTCCGTT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAAACAGTTCTGACACATaGACAGGGCACTGTGCTGAC +
Preference number: 2 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAENSSDT*TGHCAD
Trigger: GTCAGCACAGTGCCCTGTGCATGTGTCAGAACTGTT...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGACGAAGAGAAAGTCATaGGGTTTTTACGGATTCGTG +
Preference number: 2 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMTKRKS*GFYGFV
Trigger: CACGAATCCGTAAAAACCCCATGACTTTCTCTTCGT...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTCTGCCCAGCACGGGTaGGATTTGGTTTGGGACATG +
Preference number: 2 (lower is better)
Translates to: CSWGGETDALSAIRTSTYSAQHG*DLVWDM
Trigger: CATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCTCGAGTCCCCATGTTaGCGCCCCAGATACTGCATT +
Preference number: 2 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLLESPC*RPRYCI
Trigger: AATGCAGTATCTGGGGCGTCAACATGGGGACTCGAG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATAACGGAGATTCCAAGTaGTTTGCTCTTCACAAAACG +
Preference number: 2 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYNGDSK*FALHKT
Trigger: CGTTTTGTGAAGAGCAAAGCACTTGGAATCTCCGTT...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGT +
Preference number: 2 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWGQGHR*LLLADG
Trigger: ACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGGCGTGCACGCACTCTaGCCAGCACGGGTGGGATTT +
Preference number: 2 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVGVHAL*PARVGF
Trigger: AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAATGCGCTCCCGGCCATaGACCTCCTTGCTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVMRSRP*TSLLWC
Trigger: GCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCAT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATCTGCCCAGCACGGGTaGGATTTGGTTTGGGACATG +
Preference number: 2 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGSAQHG*DLVWDM
Trigger: CATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACTGCTCCGGGTGACCTaGAGACTCCTGCAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRLLRVT*RLLQSS
Trigger: GGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAACAGCTGAATCCTTATTaGTGGGTCAGGTTTACTCGA +
Preference number: 2 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEQLNPY*WVRFTR
Trigger: TCGAGTAAACCTGACCCACCAATAAGGATTCAGCTG...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCCCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTA +
Preference number: 2 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAPTCDV*LVLLQL
Trigger: TAATTGCAGAAGCACAAGCCATACATCGCAGGTAGG...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 90 bp TCCTGCTTCCTCAGTACCTGCACCCCACCTTCACGTTTGGTATCTTaGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTAC +
Preference number: 2 (lower is better)
Translates to: SCFLSTCTPPSRLVS*QRQFILSASVLHGY
Trigger: GTAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATAATACAATACTGATCTaGAGTGCTCGTGGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYNTILI*SARGEV
Trigger: CACCTCCCCACGAGCACTTCAGATCAGTATTGTATT...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCAAAACTACTCTCTTCTaGAACCAAGGAGGCAACGAG +
Preference number: 2 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVKTTLF*NQGGNE
Trigger: CTCGTTGCCTCCTTGGTTTCAGAAGAGAGTAGTTTT...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATACAAGCAGCAGACGCTaGCTGTGGCGTGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SWRELVQPSLKVSVILTYTSSRR*LWRVAH
Trigger: GTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTGT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCTGTGGTTTCCTACCTaGGATGTATGGCTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: CSWGGETDALSAIRTSTYLWFPT*DVWLVL
Trigger: AAGCACAAGCCATACATCGCAGGTAGGAAACCACAG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGCCGGCCTGGTGTGTCTaGATGTGCTCCTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGPAWCV*MCSLRC
Trigger: GCACCTCAAGGAGCACATGCAGACACACCAGGCCGG...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGAGCCACGGAGGAGACTaGGGAGGAAACTGCCTACAG +
Preference number: 2 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGSHGGD*GGNCLQ
Trigger: CTGTAGGCAGTTTCCTCCTCAGTCTCCTCCGTGGCT...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGT +
Preference number: 2 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGRHRCC*RKASAC
Trigger: ACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCT...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTGTGGCTCACTAGTATaGCTTGCGGCGAGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGCGSLV*LAASLL
Trigger: GAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTATGGCTTGTGCTTCTaGAATTATGTAACCCTGGAC +
Preference number: 2 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVYGLCF*NYVTLD
Trigger: GTCCAGGGTTACATAATTGCAGAAGCACAAGCCATA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGAGGGCCACCGTTGCTTaGTCCTTGCAGACGGTTCTG +
Preference number: 2 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGRATVA*SLQTVL
Trigger: CAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCT...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCTTCCATCTTTGGAATaGTGTAGGAATGGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLLPSLE*CRNGVH
Trigger: GTGCACGCCATTCCTACAGCATTCCAAAGATGGAAG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTGTCATGGAGAGAATTaGTCCAGCCATCTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLCHGEN*SSHLSR
Trigger: CCTTGAGAGATGGCTGGACCAATTCTCTCCATGACA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCTGAATCCTTATTGGTaGGTCAGGTTTACTCGAGTC +
Preference number: 2 (lower is better)
Translates to: CSWGGETDALSAIRTSTYLNPYW*VRFTRV
Trigger: GACTCGAGTAAACCTGACCCACCAATAAGGATTCAG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCAGCTGAATCCTTATTaGTGGGTCAGGTTTACTCGA +
Preference number: 2 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYQLNPY*WVRFTR
Trigger: TCGAGTAAACCTGACCCACCAATAAGGATTCAGCTG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTTGCAGACGGTTCTGTaGTTTCCTACCTGCGATGTA +
Preference number: 2 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLLQTVL*FPTCDV
Trigger: TACATCGCAGGTAGGAAACCACAGAACCGTCTGCAA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTACTCGAGTCCCCATGTTaGCGCCCCAGATACTGCATT +
Preference number: 2 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLLESPC*RPRYCI
Trigger: AATGCAGTATCTGGGGCGTCAACATGGGGACTCGAG...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATAACGGAGATTCCAAGTaGTTTGCTCTTCACAAAACG +
Preference number: 2 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYNGDSK*FALHKT
Trigger: CGTTTTGTGAAGAGCAAAGCACTTGGAATCTCCGTT...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGACCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTA +
Preference number: 2 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGPTCDV*LVLLQL
Trigger: TAATTGCAGAAGCACAAGCCATACATCGCAGGTAGG...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCTCTATTGCCATTCTATaGAAACGCAGCCGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFSIAIL*KRSRLG
Trigger: GCCCAAGCGGCTGCGTTTCCATAGAATGGCAATAGA...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGACCTGAACACAGATTaGTGCGGTAAGTGTGTCGCC +
Preference number: 2 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGDLNTD*CGKCVA
Trigger: GGCGACACACTTACCGCATCAATCTGTGTTCAGGTC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAGACCTGAACACAGATTaGTGCGGTAAGTGTGTCGCC +
Preference number: 2 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRDLNTD*CGKCVA
Trigger: GGCGACACACTTACCGCATCAATCTGTGTTCAGGTC...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTATGGCTTGTGCTTCTaGAATTATGTAACCCTGGAC +
Preference number: 2 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLYGLCF*NYVTLD
Trigger: GTCCAGGGTTACATAATTGCAGAAGCACAAGCCATA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCCTTCCATCTTTGGAATaGTGTAGGAATGGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFLPSLE*CRNGVH
Trigger: GTGCACGCCATTCCTACAGCATTCCAAAGATGGAAG...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGACACGTTTGGTATCTTTaGAAAGGCAATTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRHVWYL*KGNSFF
Trigger: AAAGAATGAATTGCCTTTGCAAAGATACCAAACGTG...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCTGAATCCTTATTGGTaGGTCAGGTTTACTCGAGTC +
Preference number: 2 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGLNPYW*VRFTRV
Trigger: GACTCGAGTAAACCTGACCCACCAATAAGGATTCAG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTCTTATTTGCTGGGGTaGACAGGGCCACCGTTGCTT +
Preference number: 2 (lower is better)
Translates to: SWRELVQPSLKVSVILTYSYLLG*TGPPLL
Trigger: AAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGGCATTATCTAGCAGGTaGGACTCCACACATGCTACA +
Preference number: 2 (lower is better)
Translates to: LKPARWLLASLSISNTKLALSSR*DSTHAT
Trigger: TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGC...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGGTTCTGAGTCGAGATaGCCGATGGAGACATCGGTG +
Preference number: 2 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFGSESR*PMETSV
Trigger: CACCGATGTCTCCATCGGCCATCTCGACTCAGAACC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGCGATGTATGGCTTGTaGTTCTGCAATTATGTAACC +
Preference number: 2 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGAMYGL*FCNYVT
Trigger: GGTTACATAATTGCAGAAGCACAAGCCATACATCGC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCCGTTGCTTGCTCCTTaGAGACGGTTCTGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFPLLAP*RRFCGF
Trigger: GAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGATATGCTTCTTATTTaGTGGGGTGGACAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGDMLLI*WGGQGH
Trigger: GTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCTTAAGCTACAGATATaGTTCTTATTTGCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLLKLQI*FLFAGV
Trigger: CACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAG...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGGGTGGGATTTGGTTTaGGACATGTTTTATGTGGCA +
Preference number: 2 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWGWDLV*DMFYVA
Trigger: TGCCACATAAAACATGTCCCAAACCAAATCCCACCC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGATGACTGGGTGCCGTTaGATAAAGCAGCAAATGAAA +
Preference number: 2 (lower is better)
Translates to: LKPARWLLASLSISNTKLMTGCR*IKQQMK
Trigger: TTTCATTTGCTGCTTTATTCAACGGCACCCAGTCAT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACTGTGGTTTCCTACCTaGGATGTATGGCTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRLWFPT*DVWLVL
Trigger: AAGCACAAGCCATACATCGCAGGTAGGAAACCACAG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAAGAACCTTCCATCTTTaGAATGCTGTAGGAATGGCG +
Preference number: 2 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVRTFHL*NAVGMA
Trigger: CGCCATTCCTACAGCATTCCAAAGATGGAAGGTTCT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 90 bp TTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTACTaGAGCACACAAGCAGGATCAAAACACTTAGGAACTTTCAAAAGG +
Preference number: 2 (lower is better)
Translates to: LQRQFILSASVLHGY*STQAGSKHLGTFKR
Trigger: CCTTTTGAAAGTTCCTAAGTGTTTTGATCCTGCTTGTGTGCTCAAGTAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGCAGTTAATTGCTTCGTaGACTAGACACACTAGCCAC +
Preference number: 2 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGQLIAS*TRHTSH
Trigger: GTGGCTAGTGTGTCTAGTTCACGAAGCAATTAACTG...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCAGCTGAATCCTTATTaGTGGGTCAGGTTTACTCGA +
Preference number: 2 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFQLNPY*WVRFTR
Trigger: TCGAGTAAACCTGACCCACCAATAAGGATTCAGCTG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR TCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTAAACCCTGGTTATACATaGGGCCTAGAAATCTCTTTT +
Preference number: 2 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLNPGYT*GLEISF
Trigger: AAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTT...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGACAAAAGAGAACAATaGGGTGACACTTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: SWRELVQPSLKVSVILTYDKREQ*GDTFPS
Trigger: ACTAGGAAAAGTGTCACCGCATTGTTCTCTTTTGTC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAGACAAAAGAGAACAATaGGGTGACACTTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRDKREQ*GDTFPS
Trigger: ACTAGGAAAAGTGTCACCGCATTGTTCTCTTTTGTC...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTATGGCTTGTGCTTCTaGAATTATGTAACCCTGGAC +
Preference number: 2 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFYGLCF*NYVTLD
Trigger: GTCCAGGGTTACATAATTGCAGAAGCACAAGCCATA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTACGAAGAGAAAGTCATaGGGTTTTTACGGATTCGTG +
Preference number: 2 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFTKRKS*GFYGFV
Trigger: CACGAATCCGTAAAAACCCCATGACTTTCTCTTCGT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTATTATCCTCAAAACCCTaGTTATACATGAGGCCTAGA +
Preference number: 2 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLLSSKP*LYMRPR
Trigger: TCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAA...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAAAATACATCTGTTTATaGACGAAGAGAAAGTCATGG +
Preference number: 2 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVKYICL*TKRKSW
Trigger: CCATGACTTTCTCTTCGTGCATAAACAGATGTATTT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTAAATACATCTGTTTATaGACGAAGAGAAAGTCATGG +
Preference number: 2 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFKYICL*TKRKSW
Trigger: CCATGACTTTCTCTTCGTGCATAAACAGATGTATTT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp CACTCGCCGGCGGCCTCCTGCACCACCTCCTCCAGGTaGAGGGTCCGGCTCAGCTCCTCCCCGTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: HSPAASCTTSSR*RVRLSSSPSCS
Trigger: GGAGCAGGACGGGGAGGAGCTGAGCCGGACCCTCCACCTGGAGGAGGTGGTGCAGGAGGCCGCCGGCGAGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 72 bp GGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTaGCCGGGGCCAGGTTCCCAGAGACGCCAGCTACCT +
Preference number: 3 (lower is better)
Translates to: GTGAPGPPSLAG*PGPGSQRRQLP
Trigger: AGGTAGCTGGCGTCTCTGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 72 bp CTGCACACGGGGCAGCCGTGGATGCGCTCCCGGCCATaGACCTCCTTGCTGTGGTGCATGAGCACCGCCGCC +
Preference number: 3 (lower is better)
Translates to: LHTGQPWMRSRP*TSLLWCMSTAA
Trigger: GGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCATCCACGGCTGCCCCGTGTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp TCCAGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTaGTTGCCCGGGGCCAGGTTCCCAGAGACGCCAGCT +
Preference number: 3 (lower is better)
Translates to: SRHWCARPSFSG*LPGARFPETPA
Trigger: AGCTGGCGTCTCTGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp GCCGCCGATGAGAAGGCGCGGTCACACTCCAGGCACTaGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCC +
Preference number: 3 (lower is better)
Translates to: AADEKARSHSRH*CARPSFSGWLP
Trigger: GGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTGTGACCGCGCCTTCTCATCGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 72 bp CACCTCCTTGCTGTGGTGCATGAGCACCGCCGCCGATaGGAAGGCGCGGTCACACTCCAGGCACTGGTGCGC +
Preference number: 3 (lower is better)
Translates to: HLLAVVHEHRRR*EGAVTLQALVR
Trigger: GCGCACCAGTGCCTGGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 72 bp TGCGCTCCCGGCCATGCACCTCCTTGCTGTGGTGCATaGGCACCGCCGCCGATGAGAAGGCGCGGTCACACT +
Preference number: 3 (lower is better)
Translates to: CAPGHAPPCCGA*APPPMRRRGHT
Trigger: AGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 72 bp TGGATGCGCTCCCGGCCATGCACCTCCTTGCTGTGGTaGATGAGCACCGCCGCCGATGAGAAGGCGCGGTCA +
Preference number: 3 (lower is better)
Translates to: WMRSRPCTSLLW*MSTAADEKARS
Trigger: TGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCATCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 72 bp ACTTCCAACTCGCATCAGAAGACGTGGGTGAGGGCCTaGCACTCGCCGGCGGCCTCCTGCACCACCTCCTCC +
Preference number: 3 (lower is better)
Translates to: TSNSHQKTWVRA*HSPAASCTTSS
Trigger: GGAGGAGGTGGTGCAGGAGGCCGCCGGCGAGTGGCAGGCCCTCACCCACGTCTTCTGATGCGAGTTGGAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp CTCACTAGTATGACTTGCGGCGAGCCTGCTCCACCCTaGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: LTSMTCGEPAPP*PEREGSVRSAG
Trigger: CCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 72 bp GAGGGTGAGCTATGTGCTCATCCGTGCATGGGGGTCTaGGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACC +
Preference number: 3 (lower is better)
Translates to: EGELCAHPCMGV*GGESVRRGPAT
Trigger: GGTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGAGCACATAGCTCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR TCA 72 bp CAGCAGACGCTGACTGTGGCGTGTGGCTCACTAGTATaGCTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGA +
Preference number: 3 (lower is better)
Translates to: QQTLTVACGSLV*LAASLLHPGPR
Trigger: TCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACACGCCACAGTCAGCGTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 72 bp GACGCTGACTGTGGCGTGTGGCTCACTAGTATGACTTaGGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: DADCGVWLTSMT*GEPAPPWPERE
Trigger: CTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACACGCCACAGTCAGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTAGGTGCGTGGCGCGCTaGAAGGCCTTCCTGCACACG +
Preference number: 3 (lower is better)
Translates to: AGVDRATVACSLQTVLWFRCVAR*KAFLHT
Trigger: CGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACCT...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 72 bp AAAGGTGTACTTCCAACTCGCATCAGAAGACGTGGGTaGGGGCCTGCCACTCGCCGGCGGCCTCCTGCACCA +
Preference number: 3 (lower is better)
Translates to: KGVLPTRIRRRG*GPATRRRPPAP
Trigger: TGGTGCAGGAGGCCGCCGGCGAGTGGCAGGCCCTCACCCACGTCTTCTGATGCGAGTTGGAAGTACACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp GTGAGGGTGAGGGTGAGCTATGTGCTCATCCGTGCATaGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGC +
Preference number: 3 (lower is better)
Translates to: VRVRVSYVLIRA*GSEEGNPFGEG
Trigger: GCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGAGCACATAGCTCACCCTCACCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp ACTCTTGGCTTCTGGGAGCTCAAAGAGGGGCCGGCCTaGTGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCG +
Preference number: 3 (lower is better)
Translates to: TLGFWELKEGPA*CVCMCSLRCVA
Trigger: CGCCACGCACCTCAAGGAGCACATGCAGACACACCAGGCCGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CAA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGTTGTCATGGAGAGAATaGGTCCAGCCATCTCTCAAG +
Preference number: 3 (lower is better)
Translates to: GHCADAHGSLSRSHALILLSWRE*VQPSLK
Trigger: CTTGAGAGATGGCTGGACCAATTCTCTCCATGACAA...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR TCA 72 bp TCACCTCCCACGCCCGACGAGGACATGACCAGGTTCTaGGTCGAGATGGCCGATGGAGACATCGGTGTTGTT +
Preference number: 3 (lower is better)
Translates to: SPPTPDEDMTRF*VEMADGDIGVV
Trigger: AACAACACCGATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTGGGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp GTCGCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTaGGTCAGGTTTACTCGAGTCCCCATGTTGACGCCC +
Preference number: 3 (lower is better)
Translates to: VASPCGQLNPYW*VRFTRVPMLTP
Trigger: GGGCGTCAACATGGGGACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 72 bp CTAGCAGGTGGGACTCCACACATGCTACATGCCTCCTaGTTCCTCAGTACCTGCACCCCACCTTCACGTTTG +
Preference number: 3 (lower is better)
Translates to: LAGGTPHMLHAS*FLSTCTPPSRL
Trigger: CAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCAGGAGGCATGTAGCATGTGTGGAGTCCCACCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp CGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTaGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCA +
Preference number: 3 (lower is better)
Translates to: RSPVCMRLWRSS*LGLANAFSQVS
Trigger: TGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CAA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGAGACATCGGTGTTGTaGAAGGAAGGCTTCCGCTTG +
Preference number: 3 (lower is better)
Translates to: LECCRNGVHALCPARVGFETSVL*KEGFRL
Trigger: CAAGCGGAAGCCTTCCTTCAACAACACCGATGTCTC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 72 bp GATGCGGTAAGTGTGTCGCCAGCCCGTGTGGACAGCTaGATCCTTATTGGTGGGTCAGGTTTACTCGAGTCC +
Preference number: 3 (lower is better)
Translates to: DAVSVSPARVDS*ILIGGSGLLES
Trigger: GGACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGCGACACACTTACCGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 72 bp TTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTaGTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGC +
Preference number: 3 (lower is better)
Translates to: FLFAGVDRATVA*SLQTVLWFPTC
Trigger: GCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 72 bp GCATTATCTAGCAGGTGGGACTCCACACATGCTACATaGCTCCTGCTTCCTCAGTACCTGCACCCCACCTTC +
Preference number: 3 (lower is better)
Translates to: ALSSRWDSTHAT*LLLPQYLHPTF
Trigger: GAAGGTGGGGTGCAGGTACTGAGGAAGCAGGAGGCATGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp TGTGTCGCCAGCCCGTGTGGACAGCTGAATCCTTATTaGTGGGTCAGGTTTACTCGAGTCCCCATGTTGACG +
Preference number: 3 (lower is better)
Translates to: CVASPCGQLNPY*WVRFTRVPMLT
Trigger: CGTCAACATGGGGACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGCGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp AGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTaGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RATVACSLQTVL*FPTCDVWLVLL
Trigger: CAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp ATTTCTTCACAAGCAGCAGACGCTGACTGTGGCGTGTaGCTCACTAGTATGACTTGCGGCGAGCCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: ISSQAADADCGV*LTSMTCGEPAP
Trigger: TGGAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTGTGAAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 72 bp ATGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAC +
Preference number: 3 (lower is better)
Translates to: MLLICWGGQGHR*LLLADGSVVSY
Trigger: GTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 72 bp TCTTTGGAATGCTGTAGGAATGGCGTGCACGCACTCTaGCCAGCACGGGTGGGATTTGGTTTGGGACATGTT +
Preference number: 3 (lower is better)
Translates to: SLECCRNGVHAL*PARVGFGLGHV
Trigger: AACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 72 bp AGAACCTTCCATCTTTGGAATGCTGTAGGAATGGCGTaGACGCACTCTGCCCAGCACGGGTGGGATTTGGTT +
Preference number: 3 (lower is better)
Translates to: RTFHLWNAVGMA*THSAQHGWDLV
Trigger: AACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAAAGATGGAAGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp GCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTaGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGG +
Preference number: 3 (lower is better)
Translates to: ALSYRYASYLLG*TGPPLLAPCRR
Trigger: CCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTTTGTCATGGAGAGAATaGGTCCAGCCATCTCTCAAG +
Preference number: 3 (lower is better)
Translates to: LECCRNGVHALCPARVGFLSWRE*VQPSLK
Trigger: CTTGAGAGATGGCTGGACCAATTCTCTCCATGACAA...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCGGGTGGGATTTGGTTaGGGACATGTTTTATGTGGC +
Preference number: 3 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYRVGFG*GHVLCG
Trigger: GCCACATAAAACATGTCCCAAACCAAATCCCACCCG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAATGGAGACATCGGTGTaGTTGAAGGAAGGCTTCCGC +
Preference number: 3 (lower is better)
Translates to: SIAVRPLHVQLHVALLREMETSV*LKEGFR
Trigger: GCGGAAGCCTTCCTTCAACAACACCGATGTCTCCAT...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CAA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGTCCAGCTGGCTTGGTTaGGCAAATGCCTTCTCACAA +
Preference number: 3 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPSSWLG*ANAFSQ
Trigger: TTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGA...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp TTCTCACAAGTGTCACATTTAAACACTCTTGGCTTCTaGGAGCTCAAAGAGGGGCCGGCCTGGTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: FSQVSHLNTLGF*ELKEGPAWCVC
Trigger: GCAGACACACCAGGCCGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGTGACACTTGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp CCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTaGTTTGGCAAATGCCTTCTCACAAGTGTCACATTT +
Preference number: 3 (lower is better)
Translates to: PCMYAAVALQLA*FGKCLLTSVTF
Trigger: AAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR-3UTR CAA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTTGTCATGGAGAGAATaGGTCCAGCCATCTCTCAAG +
Preference number: 3 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLSWRE*VQPSLK
Trigger: CTTGAGAGATGGCTGGACCAATTCTCTCCATGACAA...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCAGGGCCACCGTTGCTaGCTCCTTGCAGACGGTTCT +
Preference number: 3 (lower is better)
Translates to: CSWGGETDALSAIRTSTYQGHRC*LLADGS
Trigger: AGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCAGCACGGGTGGGATTaGGTTTGGGACATGTTTTAT +
Preference number: 3 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYQHGWD*VWDMFY
Trigger: ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGTCTGCATGTGCTCCTaGAGGTGCGTGGCGCGCTTG +
Preference number: 3 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGVCMCS*RCVARL
Trigger: CAAGCGCGCCACGCACCTCAAGGAGCACATGCAGAC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR TCA 72 bp TTCTGCAATTATGTAACCCTGGACCTGAACACAGATTaGTGCGGTAAGTGTGTCGCCAGCCCGTGTGGACAG +
Preference number: 3 (lower is better)
Translates to: FCNYVTLDLNTD*CGKCVASPCGQ
Trigger: CTGTCCACACGGGCTGGCGACACACTTACCGCATCAATCTGTGTTCAGGTCCAGGGTTACATAATTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp AGAGGAGAGTGGCATTTGATGAGCCTCCCACTGACCTaGCTGCAAGCTGTCAGATGCCATGTCATAGCATTT +
Preference number: 3 (lower is better)
Translates to: RGEWHLMSLPLT*LQAVRCHVIAF
Trigger: AAATGCTATGACATGGCATCTGACAGCTTGCAGCCAGGTCAGTGGGAGGCTCATCAAATGCCACTCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp AAATGCCTTCTCACAAGTGTCACATTTAAACACTCTTaGCTTCTGGGAGCTCAAAGAGGGGCCGGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: KCLLTSVTFKHS*LLGAQRGAGLV
Trigger: CACCAGGCCGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CCA 72 bp GTGTGCTTCTTCATGTGCACCTGCAGCGCACTCTTCTaGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAAC +
Preference number: 3 (lower is better)
Translates to: VCFFMCTCSALF*LKAFSQSVQWN
Trigger: GTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTGCAGGTGCACATGAAGAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR GCA 72 bp GGGTTTTTACGGATTCGTGGCCTTAAGCTACAGATATaGTTCTTATTTGCTGGGGTGGACAGGGCCACCGTT +
Preference number: 3 (lower is better)
Translates to: GFLRIRGLKLQI*FLFAGVDRATV
Trigger: AACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAATCCGTAAAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGAACCCCACCTTCACGTTaGGTATCTTTGCAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRTPPSR*VSLQRQ
Trigger: TTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGT...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR GCA 72 bp CGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTaGTTCTGCAATTATGTAACCCTGGACCTGAACACA +
Preference number: 3 (lower is better)
Translates to: RFCGFLPAMYGL*FCNYVTLDLNT
Trigger: TGTGTTCAGGTCCAGGGTTACATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 72 bp GCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTaGGATGTATGGCTTGTGCTTCTGCAATTATGTAAC +
Preference number: 3 (lower is better)
Translates to: ACSLQTVLWFPT*DVWLVLLQLCN
Trigger: GTTACATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp TTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTATGTAACCCTGGACCT +
Preference number: 3 (lower is better)
Translates to: LQTVLWFPTCDV*LVLLQLCNPGP
Trigger: AGGTCCAGGGTTACATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp TTTCATCTATTGCCATTCTATGGAAACGCAGCCGCTTaGGCATTATCTAGCAGGTGGGACTCCACACATGCT +
Preference number: 3 (lower is better)
Translates to: FHLLPFYGNAAA*ALSSRWDSTHA
Trigger: AGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCCATAGAATGGCAATAGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGAGATTCCAAGTGCTTaGCTCTTCACAAAACGTAAC +
Preference number: 3 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAEIPSA*LFTKRN
Trigger: GTTACGTTTTGTGAAGAGCAAAGCACTTGGAATCTC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCAGGGCCACCGTTGCTaGCTCCTTGCAGACGGTTCT +
Preference number: 3 (lower is better)
Translates to: SWRELVQPSLKVSVILTYQGHRC*LLADGS
Trigger: AGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCGGGTGGGATTTGGTTaGGGACATGTTTTATGTGGC +
Preference number: 3 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLRVGFG*GHVLCG
Trigger: GCCACATAAAACATGTCCCAAACCAAATCCCACCCG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAAATGACTGGGTGCCGTaGAATAAAGCAGCAAATGAA +
Preference number: 3 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAENDWVP*NKAANE
Trigger: TTCATTTGCTGCTTTATTCAACGGCACCCAGTCATT...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CAA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGAGAGGAGAGTGGCATTaGATGAGCCTCCCACTGACC +
Preference number: 3 (lower is better)
Translates to: LKPARWLLASLSISNTKLRGEWH*MSLPLT
Trigger: GGTCAGTGGGAGGCTCATCAAATGCCACTCTCCTCT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp CAGTGGCCTTTGGCGTACGATCTTTTCATTAGAATATaGGAAAGGTGTAGAGGCCCCAAGTACAGATACGAC +
Preference number: 3 (lower is better)
Translates to: QWPLAYDLFIRI*ERCRGPKYRYD
Trigger: GTCGTATCTGTACTTGGGGCCTCTACACCTTTCCCATATTCTAATGAAAAGATCGTACGCCAAAGGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CAA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCAGCACGGGTGGGATTaGGTTTGGGACATGTTTTAT +
Preference number: 3 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLQHGWD*VWDMFY
Trigger: ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTGTGCTTCATGGTTACTaGAGCACACAAGCAGGATCA +
Preference number: 3 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLVLHGY*STQAGS
Trigger: TGATCCTGCTTGTGTGCTCAAGTAACCATGAAGCAC...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR TCA 72 bp CTTATTGGTGGGTCAGGTTTACTCGAGTCCCCATGTTaGCGCCCCAGATACTGCATTCTTGTAACTAATGAT +
Preference number: 3 (lower is better)
Translates to: LIGGSGLLESPC*RPRYCILVTND
Trigger: ATCATTAGTTACAAGAATGCAGTATCTGGGGCGTCAACATGGGGACTCGAGTAAACCTGACCCACCAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR TCA 72 bp TATTCTGCATATGCGGCTACAGCCAGGTTTACACACTaGCATTCAAGGAAGGAAACCTCCGGATTGGTAAGA +
Preference number: 3 (lower is better)
Translates to: YSAYAATARFTH*HSRKETSGLVR
Trigger: TCTTACCAATCCGGAGGTTTCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR GCA 72 bp AGAAAATATGCACGAAGGAAACATCCCCTAGTTAAGTaGCAGACAAGCACTGATGTTCATGTCCCACCAGCA +
Preference number: 3 (lower is better)
Translates to: RKYARRKHPLVK*QTSTDVHVPPA
Trigger: TGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGCATATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp CATCTCTGCCTCACTTACTTCCTATGCAGTAGGTCTTaGAAAAGGGATACATTCGCAACGATCAATCCTTGG +
Preference number: 3 (lower is better)
Translates to: HLCLTYFLCSRS*KRDTFATINPW
Trigger: CCAAGGATTGATCGTTGCGAATGTATCCCTTTTCCAAGACCTACTGCATAGGAAGTAAGTGAGGCAGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp GGTGTAGAGGCCCCAAGTACAGATACGACATTAAATTaGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTC +
Preference number: 3 (lower is better)
Translates to: GVEAPSTDTTLN*VVRVGAFEISF
Trigger: GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGTACTTGGGGCCTCTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CCA 72 bp CCCACTTTCTCCACAATGAAGAAGATGCCAGCTCAGTaGCCTTTGGCGTACGATCTTTTCATTAGAATATGG +
Preference number: 3 (lower is better)
Translates to: PTFSTMKKMPAQ*PLAYDLFIRIW
Trigger: CCATATTCTAATGAAAAGATCGTACGCCAAAGGCCACTGAGCTGGCATCTTCTTCATTGTGGAGAAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGAGATTCCAAGTGCTTaGCTCTTCACAAAACGTAAC +
Preference number: 3 (lower is better)
Translates to: CSWGGETDALSAIRTSTYEIPSA*LFTKRN
Trigger: GTTACGTTTTGTGAAGAGCAAAGCACTTGGAATCTC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGAAGGAAACCTCCGGATaGGTAAGAAGTCCAGTATCA +
Preference number: 3 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLKETSG*VRSPVS
Trigger: TGATACTGGACTTCTTACCAATCCGGAGGTTTCCTT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR TCA 72 bp GAACTTTCAAAAGGTTCCTCAATGACTGGGTGCCGTTaGATAAAGCAGCAAATGAAAGGGAACAGGAACAGT +
Preference number: 3 (lower is better)
Translates to: ELSKGSSMTGCR*IKQQMKGNRNS
Trigger: ACTGTTCCTGTTCCCTTTCATTTGCTGCTTTATTCAACGGCACCCAGTCATTGAGGAACCTTTTGAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CAA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGAGATATGCTTCTTATTaGCTGGGGTGGACAGGGCCA +
Preference number: 3 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGRYASY*LGWTGP
Trigger: TGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCT...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp GCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATaGTTACTTGAGCACACAAGCAGGATCAAAACACTT +
Preference number: 3 (lower is better)
Translates to: AKAIHSFSFSAS*LLEHTSRIKTL
Trigger: AAGTGTTTTGATCCTGCTTGTGTGCTCAAGTAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR GCA 72 bp AGAACCTTTAAAACTCTAGCACAATTACAGTTATTCTaGATATGCGGCTACAGCCAGGTTTACACACTGACA +
Preference number: 3 (lower is better)
Translates to: RTFKTLAQLQLF*ICGYSQVYTLT
Trigger: TGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAGAGTTTTAAAGGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp CAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATaGGGTTTTTACGGATTCGTGGCCTTAAGCTACAGA +
Preference number: 3 (lower is better)
Translates to: QKYICLCTKRKS*GFYGFVALSYR
Trigger: TCTGTAGCTTAAGGCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CCA 72 bp AAACACTTAGGAACTTTCAAAAGGTTCCTCAATGACTaGGTGCCGTTGAATAAAGCAGCAAATGAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: KHLGTFKRFLND*VPLNKAANERE
Trigger: TTCCCTTTCATTTGCTGCTTTATTCAACGGCACCCAGTCATTGAGGAACCTTTTGAAAGTTCCTAAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR GCA 72 bp TTTAAAACTCTAGCACAATTACAGTTATTCTGCATATaGGGCTACAGCCAGGTTTACACACTGACATTCAAG +
Preference number: 3 (lower is better)
Translates to: FKTLAQLQLFCI*GYSQVYTLTFK
Trigger: CTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAGAGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATTTTATGTGGCACCATaGACGATACTAAAGAATTCC +
Preference number: 3 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVFYVAP*TILKNS
Trigger: GGAATTCTTTAGTATCGTCAATGGTGCCACATAAAA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR-3UTR CAA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACTTCATTTTCATCTATaGCCATTCTATGGAAACGCA +
Preference number: 3 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRLHFHL*PFYGNA
Trigger: TGCGTTTCCATAGAATGGCAATAGATGAAAATGAAG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR-3UTR CAA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTTTTATGTGGCACCATaGACGATACTAAAGAATTCC +
Preference number: 3 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFFYVAP*TILKNS
Trigger: GGAATTCTTTAGTATCGTCAATGGTGCCACATAAAA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
36% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACCCGGCCCTCCTTCTCTaGCTGGTTGCCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNPALLL*LVARGQ
Trigger: CTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGG...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCATGCGCTCCCGGCCATaGACCTCCTTGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RHWCARPSFSGWLPGARFMRSRP*TSLLWC
Trigger: GCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCAT...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACATCAGAAGACGTGGGTaGGGGCCTGCCACTCGCCGG +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNIRRRG*GPATRR
Trigger: CCGGCGAGTGGCAGGCCCTCACCCACGTCTTCTGAT...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCTCAGAGCTGGGAGCCTaGAGCAAGCTCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RHWCARPSFSGWLPGARFSELGA*SKLCWW
Trigger: CCACCAGCAGAGCTTGCTGCAGGCTCCCAGCTCTGA...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCGGTCCCACACTGTGCTaGACAGACCTGGAACCGGAG +
Preference number: 4 (lower is better)
Translates to: RHWCARPSFSGWLPGARFGPTLC*TDLEPE
Trigger: CTCCGGTTCCAGGTCTGTGCAGCACAGTGTGGGACC...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGCCTTCTCTGACACCGTaGCGCTCTCCTGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQPSLTP*RSPAAG
Trigger: TCCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAAGG...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGGAGAGAGCTGTTCTGTaGGGCCAGGCCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQERAVL*GQARLP
Trigger: GGGGAGCCTGGCCTGGCCCCACAGAACAGCTCTCTC...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGCCCTCCTTCTCTGGCTaGTTGCCCGGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRPSFSG*LPGARF
Trigger: GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGG...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGGAGCTCGGCTGGCTTaGGGCCGACGTGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFGARLA*GRRGLG
Trigger: GCCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACGTGTGCGACCGCACATaGTGCTTCAGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNVCDRT*CFRWLD
Trigger: GTCCAGCCACCTGAAGCAGCATGTGCGGTCGCACAC...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACCCGGCCTGGTGTGTCTaGATGTGCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNPAWCV*MCSLRC
Trigger: GCACCTCAAGGAGCACATGCAGACACACCAGGCCGG...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATCCGTGCATGGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACACGTCGCTCACCGCCTaGGAGCTCGGCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SSVHGGLRRGIRSERASHTSLTA*ELGWLE
Trigger: CTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGT...GTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGCGCCCGACGAGGACATaGCCAGGTTCTGAGTCGAGA +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRRPTRT*PGSESR
Trigger: TCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCG...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACTGTGGCTCACTAGTATaGCTTGCGGCGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNCGSLV*LAASLL
Trigger: GAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACA...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGCGGGGCAGCCGTGGATaGGCTCCCGGCCATGCACCT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPARGSRG*APGHAP
Trigger: AGGTGCATGGCCGGGAGCGCATCCACGGCTGCCCCG...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTACCCCGAGGAAGACGTaGCAGTGGGCCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFTPRKT*QWAQRP
Trigger: AGGCCGCTGGGCCCACTGCCACGTCTTCCTCGGGGT...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACACACGGGGCAGCCGTaGATGCGCTCCCGGCCATGC +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLHTGQP*MRSRPC
Trigger: GCATGGCCGGGAGCGCATCCACGGCTGCCCCGTGTG...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 72 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTaGAAGGCCTTCCTGCACACGGGGCAGCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVAR*KAFLHTGQPWM
Trigger: CATCCACGGCTGCCCCGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACGGCCAGGCTCCCCCGTaGGCTGCTGAGCCAATAGGT +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHGQAPP*AAEPIG
Trigger: ACCTATTGGCTCAGCAGCTCACGGGGGAGCCTGGCC...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTCGGGGCAGCCGTGGATaGGCTCCCGGCCATGCACCT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFRGSRG*APGHAP
Trigger: AGGTGCATGGCCGGGAGCGCATCCACGGCTGCCCCG...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTTCGCCGGCGGCCTCCTaGACCACCTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFSPAAS*TTSSRW
Trigger: CCACCTGGAGGAGGTGGTGCAGGAGGCCGCCGGCGA...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCACGTGGGTGAGGGCCTaGCACTCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVTWVRA*HSPAAS
Trigger: GGAGGCCGCCGGCGAGTGGCAGGCCCTCACCCACGT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATGCCTGGGAGCTCGGCTaGCTTGAGGCCGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHAWELG*LEADVA
Trigger: AGCCACGTCGGCCTCAAGCCAGCCGAGCTCCCAGGC...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGCGGATCTTGGCTAACTaGGCTGTCTCCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQRILAN*AVSSSV
Trigger: CACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCCG...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGTCGCAGAGGTCACTGTaGGCTGTAAGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQSQRSL*AVRTGL
Trigger: CAGGCCTGTCCTTACAGCCCACAGTGACCTCTGCGA...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCCGGCCCTCCTTCTCTaGCTGGTTGCCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTPALLL*LVARGQ
Trigger: CTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACAACACTCTTGGCTTCTaGGAGCTCAAAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNNTLGF*ELKEGP
Trigger: CGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGTGTT...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGAGCTCGGCTGGCTTaGGGCCGACGTGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYGARLA*GRRGLG
Trigger: GCCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTCTGCTTCCAGGGGCTaGTCTGCCAACTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFSASRG*SANCWP
Trigger: GGGCCAGCAGTTGGCAGATCAGCCCCTGGAAGCAGA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACCTGCAGTCCTTCCGATaGGCTTCGAGTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNLQSFR*ASSHRL
Trigger: AAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAG...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGACAAGCAGCAGACGCTaGCTGTGGCGTGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLTSSRR*LWRVAH
Trigger: GTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTGT...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGAGCACCGCCGCCGATaGGAAGGCGCGGTCACACTC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTEHRRR*EGAVTL
Trigger: GAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGGCCCGTGTGGACAGCTaGATCCTTATTGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRARVDS*ILIGGS
Trigger: TGACCCACCAATAAGGATTCAGCTGTCCACACGGGC...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGCCAGCTCCTGGCGGTaGTCCTCCATGTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFASSWR*SSMCTA
Trigger: GGCCGTGCACATGGAGGAGCACCGCCAGGAGCTGGC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACTGTGCGCTGTCAGCGTaGTCTTCACGGCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHCALSA*SSRRRR
Trigger: GCGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACA...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGACCACCTCTGCCGTCTaGGGCAGCTCGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPATTSAV*GSSSLS
Trigger: CGAGAGCGACGAGCTGCCGCAGACGGCAGAGGTGGT...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATCCGTGCATGGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACTGCGACCGCACATGCTaGTTCAGGTGGCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: SSVHGGLRRGIRSERASHCDRTC*FRWLDF
Trigger: GAAGTCCAGCCACCTGAAGCAGCATGTGCGGTCGCA...GTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGATATGTGTGGCCATGTaGCGGGTGAGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: GHCADAHGSLSRSHALILICVAM*RVRLPL
Trigger: CAATGGCAGCCTCACCCGGCACATGGCCACACATAT...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACAGGGCCCAGCGGCCTGTaGCAGGACCTGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GNAAAWALSSRWDSTHATGPSGL*QDLAQA
Trigger: AGCCTGAGCCAGGTCCTGGCACAGGCCGCTGGGCCC...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGGCCCAGCGGCCTGTaGCAGGACCTGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYGPSGL*QDLAQA
Trigger: AGCCTGAGCCAGGTCCTGGCACAGGCCGCTGGGCCC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGCACTCCAGGCACTGGTaGGCCCGGCCCTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAHSRHW*ARPSFS
Trigger: AGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTG...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAACGTGGGTGAGGGCCTaGCACTCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRETWVRA*HSPAAS
Trigger: GGAGGCCGCCGGCGAGTGGCAGGCCCTCACCCACGT...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATAGTCGCCGCGCGCCTTaGTCTCCCTGGGCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYSRRAP*SPWASG
Trigger: CCCCGAAGCCCAGGGAGAGCAAGGCGCGCGGCGACT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACGTTCCAGCCAGCTCCTaGCGGTGCTCCTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHVPASS*RCSSMC
Trigger: GCACATGGAGGAGCACCGCCAGGAGCTGGCTGGAAC...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGCCACCTGCATTTGAGTaGAGGCCTGCATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GHCADAHGSLSRSHALILPPAFE*RPACSA
Trigger: AGCAGAGCATGCAGGCCTCCACTCAAATGCAGGTGG...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGCCACCTGCATTTGAGTaGAGGCCTGCATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQPPAFE*RPACSA
Trigger: AGCAGAGCATGCAGGCCTCCACTCAAATGCAGGTGG...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTACCCCGAGGAAGACGTaGCAGTGGGCCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFTPRKT*QWAQRP
Trigger: AGGCCGCTGGGCCCACTGCCACGTCTTCCTCGGGGT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGAGCCTGCTCCACCCTaGCCCGAGAGAGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAEPAPP*PEREGS
Trigger: GGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACTCTTATTTGCTGGGGTaGACAGGGCCACCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNSYLLG*TGPPLL
Trigger: AAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGA...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGAGCTCGGCTGGCTTaGGGCCGACGTGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYGARLA*GRRGLG
Trigger: GCCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGCCAGGAGCTGCTGGATaGCGTCGCTCACCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPPGAAG*RRSPPG
Trigger: CCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGG...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATCTGCTTCCAGGGGCTaGTCTGCCAACTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLSASRG*SANCWP
Trigger: GGGCCAGCAGTTGGCAGATCAGCCCCTGGAAGCAGA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCTGAGATGGGCTGGATaGCAACACTGGCAGGGACCG +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFLRWAG*QHWQGP
Trigger: CGGTCCCTGCCAGTGTTGTCATCCAGCCCATCTCAG...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGAGCACCGCCGCCGATaGGAAGGCGCGGTCACACTC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVEHRRR*EGAVTL
Trigger: GAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGTGCGTGGCGCGCTTaGAGGCCTTCCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYGAWRA*RPSCTR
Trigger: CCGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTATCAGAAGACGTGGGTaGGGGCCTGCCACTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFIRRRG*GPATRR
Trigger: CCGGCGAGTGGCAGGCCCTCACCCACGTCTTCTGAT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCCAGTTAATTGCTTCGTaGACTAGACACACTAGCCAC +
Preference number: 4 (lower is better)
Translates to: RHWCARPSFSGWLPGARFQLIAS*TRHTSH
Trigger: GTGGCTAGTGTGTCTAGTTCACGAAGCAATTAACTG...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGGACCTGAACACAGATTaGTGCGGTAAGTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQDLNTD*CGKCVA
Trigger: GGCGACACACTTACCGCATCAATCTGTGTTCAGGTC...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCACAGGGCACTGTGCTaGCGCCCACGGCTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMHRALC*RPRLAV
Trigger: GACAGCGAGCCGTGGGCGTCAGCACAGTGCCCTGTG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCCAGCTCCTGGCGGTaGTCCTCCATGTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYASSWR*SSMCTA
Trigger: GGCCGTGCACATGGAGGAGCACCGCCAGGAGCTGGC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATAGCTGCTGCCCAGGCTaGGGGGACTGCCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYSCCPG*GDCPDS
Trigger: GGAGTCGGGGCAGTCCCCGCAGCCTGGGCAGCAGCT...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCGCTGCGACCACCTCTaGCGTCTGCGGCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVRCDHL*RLRQLV
Trigger: GACGAGCTGCCGCAGACGGCAGAGGTGGTCGCAGCG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCTGCTGGCCCAGCCCTaGTTCCTCCGTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLLAQP*FLRAHH
Trigger: GTGGTGGGCACGGAGGAAGCAGGGCTGGGCCAGCAG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGTGCAGCAGTTGGCGTaGTTGGGCTCGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAVQQLA*LGSSCS
Trigger: GCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCAC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCACTCCAGGCACTGGTaGGCCCGGCCCTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTHSRHW*ARPSFS
Trigger: AGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGGCCGCTCCCCCGTGTaGTTCTTCATGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLGRSPV*FFMCTC
Trigger: GCAGGTGCACATGAAGAAGCACACGGGGGAGCGGCC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGCTGTAGGAATGGCGTaGACGCACTCTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFAVGMA*THSAQH
Trigger: GTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTACGTCGCTCACCGCCTaGGAGCTCGGCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFTSLTA*ELGWLE
Trigger: CTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGAGCTCCAGGAGCTGCTaGATGACGTCGCTCACCGCC +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPASSRSC*MTSLTA
Trigger: GGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCT...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGGTCACTGTAAAACCTTaGGGTAGCCCTGCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: GHCADAHGSLSRSHALILVTVKP*GSPAGS
Trigger: CGAACCAGCAGGGCTACCCCAAGGTTTTACAGTGAC...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TCATCCGTGCATGGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACTGCAGCAAGCTCTGCTaGTGGAAGCTTGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSVHGGLRRGIRSERASHCSKLC*WKLVER
Trigger: CCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCA...GTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGTTGTCCTCCAGAAACTaGGAACCTTGTGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRLSSRN*EPCACR
Trigger: CCTGCAGGCACAAGGTTCCCAGTTTCTGGAGGACAA...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTCCTTCTCTGACACCGTaGCGCTCTCCTGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFPSLTP*RSPAAG
Trigger: TCCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAAGG...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAAGCAGTTGGCGTGCTTaGGCTCGTCCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLSSWRA*ARPAAP
Trigger: CGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCT...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGAGCAGTTGGCGTGCTTaGGCTCGTCCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPASSWRA*ARPAAP
Trigger: CGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCT...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTCCCTCCTTCTCTGGCTaGTTGCCCGGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFPSFSG*LPGARF
Trigger: GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGG...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCCGGCCCTCCTTCTCTaGCTGGTTGCCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYPALLL*LVARGQ
Trigger: CTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATTGCACCTCCTTGCTGTaGTGCATGAGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHCTSLL*CMSTAA
Trigger: GGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCA...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGCTGTGGCGCTCCAGCTaGCTTGGTTTGGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLLWRSS*LGLANA
Trigger: GGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAG...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGTTTCACCTGTGTGCTTaGTCATGTGGGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQFHLCA*SCGSAV
Trigger: CACTGCAGACCCACATGATCAAGCACACAGGTGAAA...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGGCGAATGTGCACCTTaGGGCTGCCAGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLGECAP*GCQRWR
Trigger: TCTCCACCTCTGGCAGCCTCAAGGTGCACATTCGCC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTGCCCACCACATGCTaGGGCTCCAGGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTVPTTC*GSRSSM
Trigger: CATGCTGGACCTGGAGCCTCAGCATGTGGTGGGCAC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTGTCTCTCCAGTGGCTaGCACAGCAGAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFCLSSG*HSRGDC
Trigger: ACAGTCCCCTCTGCTGTGTCAGCCACTGGAGAGACA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTGTCCCTCAGCTCACTaGTGCGGTCCTTTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFCPSAH*CGPFLP
Trigger: CGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGCAGGTCACCCCCAGCTaGCACAGAGGCAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAQVTPS*HRGREN
Trigger: ATTCTCCCTGCCTCTGTGTCAGCTGGGGGTGACCTG...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGGCCAGGCTCCCCCGTaGGCTGCTGAGCCAATAGGT +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVGQAPP*AAEPIG
Trigger: ACCTATTGGCTCAGCAGCTCACGGGGGAGCCTGGCC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCCTTGCTGTGGTGCATaGGCACCGCCGCCGATGAGA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTPCCGA*APPPMR
Trigger: TCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGCCTTGCAGGCATGCTaGCGGGTTCCAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMALQAC*RVPASS
Trigger: GGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCAGGCCTTGCAGGCATaGTGCCGGGTTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMQALQA*CRVPAS
Trigger: GCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGAGAGCTCCAGGAGCTaGTGGATGACGTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAESSRS*WMTSLT
Trigger: GGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGTGATGCTCAGCTGCTaGCCAGGCTGCGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVVMLSC*PGCGDC
Trigger: GCAGTCCCCGCAGCCTGGGCAGCAGCTGAGCATCAC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGTGATGCTCAGCTGCTaGCCAGGCTGCGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMVMLSC*PGCGDC
Trigger: GCAGTCCCCGCAGCCTGGGCAGCAGCTGAGCATCAC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTGTGCGCTGTCAGCGTaGTCTTCACGGCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTCALSA*SSRRRR
Trigger: GCGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGCCTTGATGCCGGTGTaGGTCTTGATGTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFALMPV*VLMCAV
Trigger: GACAGCGCACATCAAGACGCACACCGGCATCAAGGC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGTCTGCTGGTCTACAGTaGTGTCATCTATCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRSAGLQ*CHLSRL
Trigger: CAGCCTCGATAGATGACAGCACTGTAGACCAGCAGA...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGACCACCTCTGCCGTCTaGGGCAGCTCGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMTTSAV*GSSSLS
Trigger: CGAGAGCGACGAGCTGCCGCAGACGGCAGAGGTGGT...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCTGCTGGCCCAGCCCTaGTTCCTCCGTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYLLAQP*FLRAHH
Trigger: GTGGTGGGCACGGAGGAAGCAGGGCTGGGCCAGCAG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTACCGTGGCGCTCTCCTaGGGCCGGATCTTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFTVALS*GRILAN
Trigger: GTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGCTTGGCTCCCGTGTaGAGGCGCATGTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFGLAPV*RRMWTF
Trigger: GAAGGTCCACATGCGCCTGCACACGGGAGCCAAGCC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGAGGAGGTTTACAGGCTaGAGTCCTTCCGATGAGCTT +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQRRFTG*SPSDEL
Trigger: AAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCT...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGCTCCCCTGTATGTATaGGGCTGTGGCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAAPLYV*GCGAPA
Trigger: AGCTGGAGCGCCACAGCCGCATACATACAGGGGAGC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGGCCGCTCCCCCGTGTaGTTCTTCATGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTGRSPV*FFMCTC
Trigger: GCAGGTGCACATGAAGAAGCACACGGGGGAGCGGCC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTCTGCTCCGGGTGACCTaGAGACTCCTGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFLLRVT*RLLQSS
Trigger: GGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAG...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCAACGGAGATTCCAAGTaGTTTGCTCTTCACAAAACG +
Preference number: 4 (lower is better)
Translates to: RHWCARPSFSGWLPGARFNGDSK*FALHKT
Trigger: CGTTTTGTGAAGAGCAAAGCACTTGGAATCTCCGTT...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTAGGGCCACCGTTGCTTaGTCCTTGCAGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFRATVA*SLQTVL
Trigger: CAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCT...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGGCGTGCACGCACTCTaGCCAGCACGGGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTGVHAL*PARVGF
Trigger: AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCTCAACATTAAATGTTTaGGGGCACTGGTCACATCGA +
Preference number: 4 (lower is better)
Translates to: RHWCARPSFSGWLPGARFSTLNV*GHWSHR
Trigger: TCGATGTGACCAGTGCCCCCAAACATTTAATGTTGA...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCGCTCATTTGAAACGCTaGAAACATCTGGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RHWCARPSFSGWLPGARFAHLKR*KHLGFE
Trigger: CTCAAAACCCAGATGTTTCCAGCGTTTCAAATGAGC...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACGCAGAGGGGACTGTTTaGTGTCTCTTCATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNAEGTV*CLFMCF
Trigger: AAAGCACATGAAGAGACACCAAACAGTCCCCTCTGC...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGCCTGTGCCAGGACCTaGCTCAGGCTGGAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFACART*LRLELL
Trigger: TAACAACTCCAGCCTGAGCCAGGTCCTGGCACAGGC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATAGGAAGACGTGGCAGTaGGCCCAGCGGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYRKTWQ*AQRPVP
Trigger: TGGCACAGGCCGCTGGGCCCACTGCCACGTCTTCCT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCAGGAAGACGTGGCAGTaGGCCCAGCGGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVRKTWQ*AQRPVP
Trigger: TGGCACAGGCCGCTGGGCCCACTGCCACGTCTTCCT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGGGTTCTGAGTCGAGATaGCCGATGGAGACATCGGTG +
Preference number: 4 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLGSESR*PMETSV
Trigger: CACCGATGTCTCCATCGGCCATCTCGACTCAGAACC...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATTCGCATCAGAAGACGTaGGTGAGGGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHSHQKT*VRACHS
Trigger: CGAGTGGCAGGCCCTCACCCACGTCTTCTGATGCGA...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACTGTCATGGAGAGAATTaGTCCAGCCATCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNCHGEN*SSHLSR
Trigger: CCTTGAGAGATGGCTGGACCAATTCTCTCCATGACA...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGTGTCCCTCAGCTCACTaGTGCGGTCCTTTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPACPSAH*CGPFLP
Trigger: CGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACA...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCAGATAGCATACCCTaGGTATCGGCCAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLPDSIP*VSASVS
Trigger: GCTGACGCTGGCCGATACTCAGGGTATGCTATCTGG...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGAGAGAGAGGGATCCGTaGGGAGCGCTGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTRERDP*GALGTA
Trigger: AGCAGTTCCCAGCGCTCCTCACGGATCCCTCTCTCT...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCCTTGCTGTGGTGCATaGGCACCGCCGCCGATGAGA +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYPCCGA*APPPMR
Trigger: TCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATATCAGAAGACGTGGGTaGGGGCCTGCCACTCGCCGG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYIRRRG*GPATRR
Trigger: CCGGCGAGTGGCAGGCCCTCACCCACGTCTTCTGAT...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGCCACTTTCTCCACAATaGAGAAGATGCCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GHCADAHGSLSRSHALILPLSPQ*RRCQLS
Trigger: ACTGAGCTGGCATCTTCTTCATTGTGGAGAAAGTGG...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGAGAGCTCCAGGAGCTaGTGGATGACGTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTESSRS*WMTSLT
Trigger: GGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCAGCTGCTGCCCAGGCTaGGGGGACTGCCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRASCCPG*GDCPDS
Trigger: GGAGTCGGGGCAGTCCCCGCAGCCTGGGCAGCAGCT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGACTGTGATGCTCAGCTaGTGCCCAGGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMTVMLS*CPGCGD
Trigger: GTCCCCGCAGCCTGGGCAGCAGCTGAGCATCACAGT...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTCTCGTGGGTGTGGATaGGGATGTGGCGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTSRGCG*GCGGPG
Trigger: ACCTGGTCCGCCACATCCGCATCCACACCCACGAGA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTAAGGCGCGGAAGCACTaGGGGCACTTGAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFKARKH*GHLKGF
Trigger: GAAGCCCTTCAAGTGCCCGCAGTGCTTCCGCGCCTT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGTGTGCGTCTTGATGTaGGCTGTCAGCGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFVCVLM*AVSVLF
Trigger: GAAGAGCACGCTGACAGCGCACATCAAGACGCACAC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACGCAGGTTTACGCTGGTaGCTCATTTTCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNAGLRW*LIFLNS
Trigger: GGAATTAAGGAAAATGAGGCACCAGCGTAAACCTGC...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCCCTGCTTCCTCCGTaGCCACCACATGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYALLPP*PPHAEA
Trigger: AGCCTCAGCATGTGGTGGGCACGGAGGAAGCAGGGC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGCCTGCAGCAAGCTCTaGTGGTGGAAGCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAACSKL*WWKLVE
Trigger: CTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTTCCTGCAGCTCCGCCTaGTTGTCCCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFSCSSA*LSLSSL
Trigger: CAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGA...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGTGCTTGGGCTCGTCCTaGAGCTCCGCCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLCLGSS*SSACLS
Trigger: GGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCA...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGAAACGCAGCTCGCAATaGGGGCATTTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLKRSSQ*GHLKGL
Trigger: CAAGCCCTTCAAATGCCCGCATTGCGAGCTGCGTTT...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTATGTGCTCCTTGAGGTaGGTGGCGCGCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFMCSLR*VARLKA
Trigger: GGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACAT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCTGCTCCGGGTGACCTaGAGACTCCTGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLLRVT*RLLQSS
Trigger: GGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGGCGTGCACGCACTCTaGCCAGCACGGGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMGVHAL*PARVGF
Trigger: AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTCGCAGAGGGTCCTGTaGAGCCACAAACCCATCTTC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFSQRVL*SHKPIF
Trigger: GAAGATGGGTTTGTGGCTCCACAGGACCCTCTGCGA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGGAGACTCAAGTGTGCTaGAATCCTGTAGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRETQVC*NPVAVG
Trigger: TCCAACAGCTACAGGATTCCAGCACACTTGAGTCTC...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACTGCAGCAAGCTCTGCTaGTGGAAGCTTGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHCSKLC*WKLVER
Trigger: CCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCA...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGTGTGCAGGCGCATGTaGACCTTCAGACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFVCRRM*TFRLPF
Trigger: GAAGGGAAGTCTGAAGGTCCACATGCGCCTGCACAC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACGTGTGCAGGCGCATGTaGACCTTCAGACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHVCRRM*TFRLPF
Trigger: GAAGGGAAGTCTGAAGGTCCACATGCGCCTGCACAC...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTGCACCTCCTTGCTGTaGTGCATGAGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVCTSLL*CMSTAA
Trigger: GGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACAGAACCTTCCATCTTTaGAATGCTGTAGGAATGGCG +
Preference number: 4 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNRTFHL*NAVGMA
Trigger: CGCCATTCCTACAGCATTCCAAAGATGGAAGGTTCT...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGCCATATGCATCTTGCTaGTATGCGTGTTTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRPYASC*YACLSC
Trigger: GCAGCTTAAACACGCATATCAGCAAGATGCATATGG...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAGTGCCCACCACATGCTaGGGCTCCAGGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLREVPTTC*GSRSSM
Trigger: CATGCTGGACCTGGAGCCTCAGCATGTGGTGGGCAC...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGCAATGCGGGCATTTaGAGGGCTTGGCTCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLRNAGI*RAWLPC
Trigger: ACACGGGAGCCAAGCCCTTCAAATGCCCGCATTGCG...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAATCCCCCGTGAGCTGCTaGGCCAATAGGTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRESPVSC*ANRLPC
Trigger: GCAGGGCAACCTATTGGCTCAGCAGCTCACGGGGGA...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGACATGACCAGGTTCTaGGTCGAGATGGCCGATGGA +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLDMTRF*VEMADG
Trigger: TCCATCGGCCATCTCGACTCAGAACCTGGTCATGTC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCGCCCGACGAGGACATaGCCAGGTTCTGAGTCGAGA +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVRPTRT*PGSESR
Trigger: TCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGAGAGAGAGGGATCCGTaGGGAGCGCTGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLRERDP*GALGTA
Trigger: AGCAGTTCCCAGCGCTCCTCACGGATCCCTCTCTCT...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGGTGCGTGGCGCGCTTaGAGGCCTTCCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAGAWRA*RPSCTR
Trigger: CCGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACTCGAGTCCCCATGTTaGCGCCCCAGATACTGCATT +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLLESPC*RPRYCI
Trigger: AATGCAGTATCTGGGGCGTCAACATGGGGACTCGAG...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACAGGCCTTGCAGGCATaGTGCCGGGTTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAQALQA*CRVPAS
Trigger: GCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTCTTTCTTGCAGGCCTTaGAGGCATGCTGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFLSCRP*RHAAGF
Trigger: GAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAG...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGAAGGCGCGGAAGCACTaGGGGCACTTGAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPKARKH*GHLKGF
Trigger: GAAGCCCTTCAAGTGCCCGCAGTGCTTCCGCGCCTT...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGAGTGGAGGCCTGCATaGTCTGCTGGTCTACAGTGC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTEWRPA*SAGLQC
Trigger: GCACTGTAGACCAGCAGAGCATGCAGGCCTCCACTC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGGCCTCGGGGTTCGCTaGGACCACCTCTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAGLGVR*DHLCRL
Trigger: CAGACGGCAGAGGTGGTCGCAGCGAACCCCGAGGCC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTTCCAGGGGCTGATCTaGCAACTGCTGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYFQGLI*QLLAQP
Trigger: GGGCTGGGCCAGCAGTTGGCAGATCAGCCCCTGGAA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGTCAAACTGGTCTACGTaGCCTCGCAGAGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPASNWST*PRRGSC
Trigger: ACAGGACCCTCTGCGAGGGCACGTAGACCAGTTTGA...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTAAACTGGGAACCTTGTaGCTGCAGGTCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFKLGTL*LQVQFL
Trigger: GAGGAACTGGACCTGCAGGCACAAGGTTCCCAGTTT...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGACCTGTAAGAGCGCCTaGTCTGGTCCTCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPATCKSA*SGPRCP
Trigger: AGGACAACGAGGACCAGAGCAGGCGCTCTTACAGGT...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGTGTGCGACCGCACATaGTGCTTCAGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMVCDRT*CFRWLD
Trigger: GTCCAGCCACCTGAAGCAGCATGTGCGGTCGCACAC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATATGTGTGGCCATGTaGCGGGTGAGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAICVAM*RVRLPL
Trigger: CAATGGCAGCCTCACCCGGCACATGGCCACACATAT...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAACCGTGGCGCTCTCCTaGGGCCGGATCTTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRETVALS*GRILAN
Trigger: GTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGT...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGCACTGGCAGGGACCGTaGTGTCCGATGTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPHWQGP*CPMSGE
Trigger: CTCTCCAGACATCGGACAGCACGGTCCCTGCCAGTG...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGTCAGCACTGAATCCTaGTCAGACAGCGGGCCTATG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAVSTES*SDSGPM
Trigger: CATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGAC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTCGCCGGCGGCCTCCTaGACCACCTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVSPAAS*TTSSRW
Trigger: CCACCTGGAGGAGGTGGTGCAGGAGGCCGCCGGCGA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCGTTGCTTGCTCCTTaGAGACGGTTCTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFPLLAP*RRFCGF
Trigger: GAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGG...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVGQGHR*LLLADG
Trigger: ACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCTGTAGGAATGGCGTaGACGCACTCTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYAVGMA*THSAQH
Trigger: GTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGTGCTGTAAAATGTCCTaGTTGATGCCCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRCCKMS*LMPTVM
Trigger: CATCACAGTGGGCATCAACCAGGACATTTTACAGCA...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCGTTCTCCTCGCGGATaGAGCCAGGTAGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTRSPRG*SQVETV
Trigger: CACCGTTTCTACCTGGCTCCATCCGCGAGGAGAACG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGGCGGACCAGGTCGCTaGGCTTGCGGAACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAGGPGR*ACGTPW
Trigger: CCAAGGAGTTCCGCAAGCCCAGCGACCTGGTCCGCC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGTCATCCCATCAGAGCTaGGAGCCTGCAGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPASSHQS*EPAASS
Trigger: AGAGCTTGCTGCAGGCTCCCAGCTCTGATGGGATGA...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCCTGCGGCCGGATCTTaGCTAACTGGGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYPAAGS*LTGLSP
Trigger: AGGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACCTTCTCTGACACCGTaGCGCTCTCCTGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAPSLTP*RSPAAG
Trigger: TCCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAAGG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGCAGCCAACTGTAACTaGATGCCTTCTAGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFAANCN*MPSRVA
Trigger: GGCTACCCTAGAAGGCATCCAGTTACAGTTGGCTGC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACGCAGCCAACTGTAACTaGATGCCTTCTAGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHAANCN*MPSRVA
Trigger: GGCTACCCTAGAAGGCATCCAGTTACAGTTGGCTGC...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGTGCTGTCCGATGTCTaGAGAGAGCTGTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLVLSDV*RELFCG
Trigger: CCCACAGAACAGCTCTCTCCAGACATCGGACAGCAC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGCCTGTGCCAGGACCTaGCTCAGGCTGGAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTACART*LRLELL
Trigger: TAACAACTCCAGCCTGAGCCAGGTCCTGGCACAGGC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATGCGCTCCAGCTGGCTTaGTTTGGCAAATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHALQLA*FGKCLL
Trigger: GAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGC...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTATGTATGCGGCTGTaGCGCTCCAGCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTVCMRL*RSSWLG
Trigger: ACCAAGCCAGCTGGAGCGCCACAGCCGCATACATAC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTCGCATCAGAAGACGTaGGTGAGGGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYSHQKT*VRACHS
Trigger: CGAGTGGCAGGCCCTCACCCACGTCTTCTGATGCGA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAATGTGCACGGCCAGCTaGCTCTGCAGAGTAAACTCA +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLMCTAS*LCRVNS
Trigger: TGAGTTTACTCTGCAGAGTCAGCTGGCCGTGCACAT...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCATCCGTGCATGGGGGTCTGAGGAGGGGAATCCGTTCGGAGAGGGCCAGCCACCCATATGCATCTTGCTaGTATGCGTGTTTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSVHGGLRRGIRSERASHPYASC*YACLSC
Trigger: GCAGCTTAAACACGCATATCAGCAAGATGCATATGG...GTGGCTGGCCCTCTCCGAACGGATTCCCCTCCTCAGACCCCCATGCACGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCAGGAGCTGCTGGATaGCGTCGCTCACCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVPGAAG*RRSPPG
Trigger: CCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGG...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTGCTGCAGCTGGAATTaGAGACAGCCCACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFCCSWN*RQPTVF
Trigger: GAAAACAGTGGGCTGTCTTCAATTCCAGCTGCAGCA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACAAGTGGGAAGCAATGTaGGTCTTCCTATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHKWEAM*VFLWPE
Trigger: CTCAGGCCATAGGAAGACTCACATTGCTTCCCACTT...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGTGCAGACGTGACAGCTaGAGAGCTTCTGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPACRRDS*RASDLC
Trigger: ACACAGGTCAGAAGCTCTTCAGCTGTCACGTCTGCA...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGGCCAGGCTCCCCCGTaGGCTGCTGAGCCAATAGGT +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAGQAPP*AAEPIG
Trigger: ACCTATTGGCTCAGCAGCTCACGGGGGAGCCTGGCC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGTTAGTGGTCAGCACTaGATCCTGCTCAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFVSGQH*ILLRQR
Trigger: CCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAAC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFRHRCC*RKASAC
Trigger: ACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCT...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGAGCCACGGAGGAGACTaGGGAGGAAACTGCCTACAG +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMSHGGD*GGNCLQ
Trigger: CTGTAGGCAGTTTCCTCCTCAGTCTCCTCCGTGGCT...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTGTGGCCCACCCATATaGATCTTGCTGATATGCGTG +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFCGPPI*ILLICV
Trigger: CACGCATATCAGCAAGATGCATATGGGTGGGCCACA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGTTTTGAGCGTGTGGTaGAGAGGTCTTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLVLSVW*RGLGMA
Trigger: TGCCATGCCAAGACCTCTGCACCACACGCTCAAAAC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATGTGCGCTGTCAGCGTaGTCTTCACGGCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASACALSA*SSRRRR
Trigger: GCGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCCTTGATGCCGGTGTaGGTCTTGATGTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYALMPV*VLMCAV
Trigger: GACAGCGCACATCAAGACGCACACCGGCATCAAGGC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCTGCTGGCCCAGCCCTaGTTCCTCCGTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVLLAQP*FLRAHH
Trigger: GTGGTGGGCACGGAGGAAGCAGGGCTGGGCCAGCAG...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGGTTCGAAGGACTGTTaGGCAGGGCTCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTGSKDC*AGLCSS
Trigger: TGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGACCTGTAAGAGCGCCTaGTCTGGTCCTCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTTCKSA*SGPRCP
Trigger: AGGACAACGAGGACCAGAGCAGGCGCTCTTACAGGT...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTGCGACCGCACATGCTaGTTCAGGTGGCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVCDRTC*FRWLDF
Trigger: GAAGTCCAGCCACCTGAAGCAGCATGTGCGGTCGCA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGATGCGGTCCTTTTCTaGCGCGGACTGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYDAVLF*RGLHQD
Trigger: GTCCTGGTGCAGTCCGCGGCAGAAAAGGACCGCATC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGCGTCTGCTGCAGAATaGTTGGATCAATCTGCAACG +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFASAAE*LDQSAT
Trigger: CGTTGCAGATTGATCCAAGCATTCTGCAGCAGACGC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGCTGAGCCAATAGGTTaGCCTGCTGTAGCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFAEPIG*PAVASA
Trigger: AGCAGACGCTACAGCAGGGCAACCTATTGGCTCAGC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCTCACTAGTATGACTTaGGGCGAGCCTGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVLTSMT*GEPAPP
Trigger: GGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTCTTTCTCACAAAGCGTaGAATGGAACGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFLSHKA*NGTAAP
Trigger: GGGAGCGGCCGTTCCATTGCACGCTTTGTGAGAAAG...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAACGTGGGTGAGGGCCTaGCACTCGCCGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGTWVRA*HSPAAS
Trigger: GGAGGCCGCCGGCGAGTGGCAGGCCCTCACCCACGT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATAGGGCCACCGTTGCTTaGTCCTTGCAGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYRATVA*SLQTVL
Trigger: CAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCAGCTCCTCCCCGTCCTGCTCCGGGTGACCTGCAGACTCCTGCAGAGCTCCAGCAATTACAGTTATTCTaGATATGCGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SAPPRPAPGDLQTPAELQQLQLF*ICGYSQ
Trigger: CTGGCTGTAGCCGCATATGCAGAATAACTGTAATTG...CTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGGGAGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCACGTCGCTCACCGCCTaGGAGCTCGGCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRATSLTA*ELGWLE
Trigger: CTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGCTTGCGGAACTCCTTaGCGCAGTAGGGACACACAT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFACGTP*RSRDTH
Trigger: ATGTGTGTCCCTACTGCGCCAAGGAGTTCCGCAAGC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGACGAAGGTCGTTGTaGATACCCATGTGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFGRRSL*IPMCRR
Trigger: ACGGCGACACATGGGTATCCACAACGACCTTCGTCC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGCTGTTGGAGCTGCTaGGCAAGCTCATATCTGTGG +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLCCWSC*ASSYLW
Trigger: CCACAGATATGAGCTTGCCCAGCAGCTCCAACAGCA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGCTCTGCTCTTCAAACTaGTCTACGTGCCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPALCSSN*STCPRR
Trigger: TCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAG...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGTGTGTGTCTTCTCGTaGGACTTGAGGACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFVCVFS*DLRTPE
Trigger: CTCTGGGGTCCTCAAGTCCCACGAGAAGACACACAC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCGGATCTTGGCTAACTaGGCTGTCTCCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMRILAN*AVSSSV
Trigger: CACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCCG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCCTGCGGCCGGATCTTaGCTAACTGGGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYPAAGS*LTGLSP
Trigger: AGGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTAGTATGTGCAGCAGTTaGCGTGCTTGGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFSMCSS*RAWARP
Trigger: AGGACGAGCCCAAGCACGCCAACTGCTGCACATACT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGCATGATAAACACGTTTaGGTCAGTAGAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GHCADAHGSLSRSHALILHDKHV*VSRGGV
Trigger: AACTCCTCCTCTACTGACCCAAACGTGTTTATCATG...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACACAGACAGCGGGCCTATaGTCAGGTTCGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GNAAAWALSSRWDSTHATQTAGL*SGSQRS
Trigger: TGACCTCTGCGAACCTGACCATAGGCCCGCTGTCTG...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGATCCGTGAGGAGCGCTaGGAACTGCTGACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMIREER*ELLTLR
Trigger: TCTCAGGGTCAGCAGTTCCCAGCGCTCCTCACGGAT...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGATCCGTGAGGAGCGCTaGGAACTGCTGACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLIREER*ELLTLR
Trigger: TCTCAGGGTCAGCAGTTCCCAGCGCTCCTCACGGAT...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGCGCTCCAGCTGGCTTaGTTTGGCAAATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTALQLA*FGKCLL
Trigger: GAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACACTGTGGCGCTCCAGCTaGCTTGGTTTGGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: GNAAAWALSSRWDSTHATLWRSS*LGLANA
Trigger: GGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAG...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTCACAAAGCGTGCAATaGAACGGCCGCTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTSQSVQ*NGRSPV
Trigger: TACAGGGGAGCGGCCGTTCCATTGCACGCTTTGTGA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGTGTCGCCAGCCCGTGTaGACAGCTGAATCCTTATTG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPACRQPV*TAESLL
Trigger: CAATAAGGATTCAGCTGTCCACACGGGCTGGCGACA...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGTCTTATTTGCTGGGGTaGACAGGGCCACCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPASYLLG*TGPPLL
Trigger: AAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGA...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTCTATTGCCATTCTATaGAAACGCAGCCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFSIAIL*KRSRLG
Trigger: GCCCAAGCGGCTGCGTTTCCATAGAATGGCAATAGA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATAGCCTCCCACTGACCTaGCTGCAAGCTGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYSLPLT*LQAVRC
Trigger: GCATCTGACAGCTTGCAGCCAGGTCAGTGGGAGGCT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCACAGATCCACACTCCTaGGGTCCCACACTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVTDPHS*GPTLCC
Trigger: GCAGCACAGTGTGGGACCCCAGGAGTGTGGATCTGT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCCAGGAGCTGCTGGATaGCGTCGCTCACCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYPGAAG*RRSPPG
Trigger: CCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTGCCGGTGTGCGTCTTaGTGTGCGCTGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRACRCAS*CALSAC
Trigger: GCACGCTGACAGCGCACATCAAGACGCACACCGGCA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGGCGAATGTGCACCTTaGGGCTGCCAGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAGECAP*GCQRWR
Trigger: TCTCCACCTCTGGCAGCCTCAAGGTGCACATTCGCC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCTTGTGGAGAGGGCCTaGGACTCAAGTGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYLVERA*DSSVLE
Trigger: TTCCAGCACACTTGAGTCTCAGGCCCTCTCCACAAG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGCAGTTCCTCTTGGGATaGCTCCTGAATCAAGCGAGT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAQFLLG*LLNQAS
Trigger: ACTCGCTTGATTCAGGAGTCATCCCAAGAGGAACTG...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTGCACACACTGCAGCTaGACGCCTTCACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVCTHCS*TPSLLC
Trigger: ACACAGGAGTGAAGGCGTTCAGCTGCAGTGTGTGCA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTAGGACGAGACTTCCGTaGTGCATTTCTGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFRTRLP*CISVRM
Trigger: CATTCTGACAGAAATGCATCACGGAAGTCTCGTCCT...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACAGTTAGTGGTCAGCACTaGATCCTGCTCAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: GNAAAWALSSRWDSTHATVSGQH*ILLRQR
Trigger: CCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAAC...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPARHRCC*RKASAC
Trigger: ACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCT...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCCCTTGCTGTGGTGCATaGGCACCGCCGCCGATGAGA +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAPCCGA*APPPMR
Trigger: TCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGG...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCTCGAGTCCCCATGTTaGCGCCCCAGATACTGCATT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYLESPC*RPRYCI
Trigger: AATGCAGTATCTGGGGCGTCAACATGGGGACTCGAG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGCTCGAGTCCCCATGTTaGCGCCCCAGATACTGCATT +
Preference number: 4 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPLESPC*RPRYCI
Trigger: AATGCAGTATCTGGGGCGTCAACATGGGGACTCGAG...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAACCCTGGTTATACATaGGGCCTAGAAATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRNPGYT*GLEISF
Trigger: AAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTT...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATCTTCCCCGCTGTGGGTaGATTTATGAAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHLPRCG*IYEVSG
Trigger: ACCTGACACTTCATAAATGCACCCACAGCGGGGAAG...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTCATGTGGGTCTGCAGTaGCCCCTTCTGGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFHVGLQ*PLLVKS
Trigger: GCTTTTAACCAGAAGGGGGCACTGCAGACCCACATG...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAACTGTGATGCTCAGCTaGTGCCCAGGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAETVMLS*CPGCGD
Trigger: GTCCCCGCAGCCTGGGCAGCAGCTGAGCATCACAGT...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGCTTTGAGCACGCCTaGAGAAACAAAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLCFEHA*RNKASS
Trigger: GGAAGAGGCTTTGTTTCTGCAGGCGTGCTCAAAGCA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGTGTGTTCTGATGTGTaGTTTGAGCACGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLVCSDV*FEHACR
Trigger: TCTGCAGGCGTGCTCAAAGCACACATCAGAACACAC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGGAGGCCTGCATGCTCTaGTGGTCTACAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLEACML*WSTVLS
Trigger: TGACAGCACTGTAGACCAGCAGAGCATGCAGGCCTC...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCGCTGCGACCACCTCTaGCGTCTGCGGCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYRCDHL*RLRQLV
Trigger: GACGAGCTGCCGCAGACGGCAGAGGTGGTCGCAGCG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGGCCTCGGGGTTCGCTaGGACCACCTCTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYGLGVR*DHLCRL
Trigger: CAGACGGCAGAGGTGGTCGCAGCGAACCCCGAGGCC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTTCCAGGGGCTGATCTaGCAACTGCTGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAFQGLI*QLLAQP
Trigger: GGGCTGGGCCAGCAGTTGGCAGATCAGCCCCTGGAA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGCCTGCAGCAAGCTCTaGTGGTGGAAGCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYACSKL*WWKLVE
Trigger: CTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAATGCGACCGCACATGCTaGTTCAGGTGGCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRECDRTC*FRWLDF
Trigger: GAAGTCCAGCCACCTGAAGCAGCATGTGCGGTCGCA...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGATGCGGTCCTTTTCTaGCGCGGACTGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASADAVLF*RGLHQD
Trigger: GTCCTGGTGCAGTCCGCGGCAGAAAAGGACCGCATC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTGCTTGGGCTCGTCCTaGAGCTCCGCCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRACLGSS*SSACLS
Trigger: GGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGAAACGCAGCTCGCAATaGGGGCATTTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTKRSSQ*GHLKGL
Trigger: CAAGCCCTTCAAATGCCCGCATTGCGAGCTGCGTTT...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTAAACGCAGCTCGCAATaGGGGCATTTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFKRSSQ*GHLKGL
Trigger: CAAGCCCTTCAAATGCCCGCATTGCGAGCTGCGTTT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGAGGAGGTTTACAGGCTaGAGTCCTTCCGATGAGCTT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPARRFTG*SPSDEL
Trigger: AAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCT...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGCCAATAGGTTGCCCTaGTGTAGCGTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMANRLP*CSVCCR
Trigger: TCTGCAGCAGACGCTACAGCAGGGCAACCTATTGGC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACACTGGCAGGGACCGTaGTGTCCGATGTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAHWQGP*CPMSGE
Trigger: CTCTCCAGACATCGGACAGCACGGTCCCTGCCAGTG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCTCACTAGTATGACTTaGGGCGAGCCTGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYLTSMT*GEPAPP
Trigger: GGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCTTTCTCACAAAGCGTaGAATGGAACGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLSHKA*NGTAAP
Trigger: GGGAGCGGCCGTTCCATTGCACGCTTTGTGAGAAAG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATTCTTCATGTGCACCTaGAGCGCACTCTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLFFMCT*SALFWL
Trigger: CAACCAGAAGAGTGCGCTGCAGGTGCACATGAAGAA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAGGCCGCTCCCCCGTGTaGTTCTTCATGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEGRSPV*FFMCTC
Trigger: GCAGGTGCACATGAAGAAGCACACGGGGGAGCGGCC...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTGCGCCCGCTTCATGTaGAGCTTCATGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTCARFM*SFMLLF
Trigger: GAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAACTGCTCCGGGTGACCTaGAGACTCCTGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAELLRVT*RLLQSS
Trigger: GGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAG...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAGQGHR*LLLADG
Trigger: ACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCTTCCATCTTTGGAATaGTGTAGGAATGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFLPSLE*CRNGVH
Trigger: GTGCACGCCATTCCTACAGCATTCCAAAGATGGAAG...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGGTGTGCTTGATCATGTaGGTCTGCAGTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPVCLIM*VCSAPF
Trigger: GAAGGGGGCACTGCAGACCCACATGATCAAGCACAC...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTTCTTGACCTCTGAGTaGACTCGCTGCACGTGCGAC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYFLTSE*TRCTCD
Trigger: GTCGCACGTGCAGCGAGTCCACTCAGAGGTCAAGAA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTTCTTGACCTCTGAGTaGACTCGCTGCACGTGCGAC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMFLTSE*TRCTCD
Trigger: GTCGCACGTGCAGCGAGTCCACTCAGAGGTCAAGAA...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGCCTGGGAGCTCGGCTaGCTTGAGGCCGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYAWELG*LEADVA
Trigger: AGCCACGTCGGCCTCAAGCCAGCCGAGCTCCCAGGC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCTTGCTCTGCGTCTGTaGGGTCCGTCTGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLLALRL*GPSAHL
Trigger: CAAATGAGCAGACGGACCCCACAGACGCAGAGCAAG...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGCTTGCGGAACTCCTTaGCGCAGTAGGGACACACAT +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVACGTP*RSRDTH
Trigger: ATGTGTGTCCCTACTGCGCCAAGGAGTTCCGCAAGC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGGACGAAGGTCGTTGTaGATACCCATGTGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVGRRSL*IPMCRR
Trigger: ACGGCGACACATGGGTATCCACAACGACCTTCGTCC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTTGCTGTTGGAGCTGCTaGGCAAGCTCATATCTGTGG +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFCCWSC*ASSYLW
Trigger: CCACAGATATGAGCTTGCCCAGCAGCTCCAACAGCA...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCTCTGCTCTTCAAACTaGTCTACGTGCCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTLCSSN*STCPRR
Trigger: TCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAAGCAAGCTCTGCTGGTaGAAGCTTGTGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRESKLCW*KLVERA
Trigger: GGCCCTCTCCACAAGCTTCCACCAGCAGAGCTTGCT...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTGCAGCAAGCTCTGCTaGTGGAAGCTTGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYCSKLC*WKLVER
Trigger: CCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTTCAGACTTCCCTTCGTaGAGAAGGCGTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFSDFPS*RRRCCR
Trigger: TCTGCAGCAACGCCTTCTCCACGAAGGGAAGTCTGA...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATACCCCGAGGAAGACGTaGCAGTGGGCCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYTPRKT*QWAQRP
Trigger: AGGCCGCTGGGCCCACTGCCACGTCTTCCTCGGGGT...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCACACGGGGCAGCCGTaGATGCGCTCCCGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLHTGQP*MRSRPC
Trigger: GCATGGCCGGGAGCGCATCCACGGCTGCCCCGTGTG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCTGTGGCGCTCCAGCTaGCTTGGTTTGGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYLWRSS*LGLANA
Trigger: GGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGTCACAAAGCGTGCAATaGAACGGCCGCTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLSQSVQ*NGRSPV
Trigger: TACAGGGGAGCGGCCGTTCCATTGCACGCTTTGTGA...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTTCTTATTTGCTGGGGTaGACAGGGCCACCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFSYLLG*TGPPLL
Trigger: AAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGA...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGTCTGCCCAGCACGGGTaGGATTTGGTTTGGGACATG +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLSAQHG*DLVWDM
Trigger: CATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGA...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGGAAACGCAGCCGCTTaGGCATTATCTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMGNAAA*ALSSRW
Trigger: CCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CAA 72 bp GTGTGTCGCCAGCCCGTGTGGACAGCTGAATCCTTATaGGTGGGTCAGGTTTACTCGAGTCCCCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: VCRQPVWTAESL*VGQVYSSPHVD
Trigger: GTCAACATGGGGACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGCGACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 72 bp CTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTaGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTG +
Preference number: 4 (lower is better)
Translates to: LLICWGGQGHRC*LLADGSVVSYL
Trigger: CAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 72 bp ATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTaGGTTTGGGACATGTTTTATGTGGCACCATTGACG +
Preference number: 4 (lower is better)
Translates to: MACTHSAQHGWD*VWDMFYVAPLT
Trigger: CGTCAATGGTGCCACATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGCGGACACGAATACGTaGATCCACTTCTGTCGATAT +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLADTNT*IHFCRY
Trigger: ATATCGACAGAAGTGGATTCACGTATTCGTGTCCGC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTTTCACCTGTGTGCTTaGTCATGTGGGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTFHLCA*SCGSAV
Trigger: CACTGCAGACCCACATGATCAAGCACACAGGTGAAA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATACCATTCTTGACCTCTaGGTGGACTCGCTGCACGTG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYTILDL*VDSLHV
Trigger: CACGTGCAGCGAGTCCACTCAGAGGTCAAGAATGGT...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTGCTGCAGCTGGAATTaGAGACAGCCCACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTCCSWN*RQPTVF
Trigger: GAAAACAGTGGGCTGTCTTCAATTCCAGCTGCAGCA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGACCTAAGTCAGTTATaGGGATTGGTTCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFDLSQL*GLVPAK
Trigger: CTTTGCAGGAACCAATCCTCATAACTGACTTAGGTC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTCTTCTCGTGGGACTTaGGGACCCCAGAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVSSRGT*GPQRKQ
Trigger: TTGTTTCCTCTGGGGTCCTCAAGTCCCACGAGAAGA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTCTTCTCGTGGGACTTaGGGACCCCAGAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYSSRGT*GPQRKQ
Trigger: TTGTTTCCTCTGGGGTCCTCAAGTCCCACGAGAAGA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGTTAGTGGTCAGCACTaGATCCTGCTCAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYVSGQH*ILLRQR
Trigger: CCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAAC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGACCTGAACACAGATTaGTGCGGTAAGTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMDLNTD*CGKCVA
Trigger: GGCGACACACTTACCGCATCAATCTGTGTTCAGGTC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAAAGGCCCATGAGGTGTaGGAAAGCTCGCTGAAACGC +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLREKAHEV*ESSLKR
Trigger: GCGTTTCAGCGAGCTTTCGCACACCTCATGGGCCTT...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGCCTTGCAGGCATGCTaGCGGGTTCCAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYALQAC*RVPASS
Trigger: GGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACAACGTCTTTCCACAGTaGGGACACGAATACGTGAAT +
Preference number: 4 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHNVFPQ*GHEYVN
Trigger: ATTCACGTATTCGTGTCCGCACTGTGGAAAGACGTT...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTTGATCATGTGGGTCTaGAGTGCCCCCTTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTLIMWV*SAPFWL
Trigger: TAACCAGAAGGGGGCACTGCAGACCCACATGATCAA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTTCTTTTTCTTGCTCTaGGTCTGTGGGGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTFFFLL*VCGVRL
Trigger: CAGACGGACCCCACAGACGCAGAGCAAGAAAAAGAA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTCTCGTGGGTGTGGATaGGGATGTGGCGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRASRGCG*GCGGPG
Trigger: ACCTGGTCCGCCACATCCGCATCCACACCCACGAGA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTTGCTTTGAGCACGCCTaGAGAAACAAAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFCFEHA*RNKASS
Trigger: GGAAGAGGCTTTGTTTCTGCAGGCGTGCTCAAAGCA...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGTCATCTATCGAGGCTaGCTGCTGATGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVVIYRG*LLMLLE
Trigger: CTCCAACAGCATCAGCAGGCAGCCTCGATAGATGAC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTCGCTGCGACCACCTCTaGCGTCTGCGGCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSRCDHL*RLRQLV
Trigger: GACGAGCTGCCGCAGACGGCAGAGGTGGTCGCAGCG...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTCAAACTGGTCTACGTaGCCTCGCAGAGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYSNWST*PRRGSC
Trigger: ACAGGACCCTCTGCGAGGGCACGTAGACCAGTTTGA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAATCTTGGGGCAGTATGTaGAGCAGTTGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRESWGSM*SSWRAW
Trigger: CCAAGCACGCCAACTGCTGCACATACTGCCCCAAGA...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAGCTGAGCCAATAGGTTaGCCTGCTGTAGCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLREAEPIG*PAVASA
Trigger: AGCAGACGCTACAGCAGGGCAACCTATTGGCTCAGC...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGTCAGCACTGAATCCTaGTCAGACAGCGGGCCTATG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYVSTES*SDSGPM
Trigger: CATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGAC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCCTTCTCTGGCTGGTTaGCCGGGGCCAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYPSLAG*PGPGSQ
Trigger: CTGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCACCTCCTTGCTGTGGTaGATGAGCACCGCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRATSLLW*MSTAAD
Trigger: ATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACTGTGGTTTCCTACCTaGGATGTATGGCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLLWFPT*DVWLVL
Trigger: AAGCACAAGCCATACATCGCAGGTAGGAAACCACAG...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGAGGACAGGGCCACCGTTaGTTGCTCCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRGQGHR*LLLADG
Trigger: ACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCC...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGATATGCTTCTTATTTaGTGGGGTGGACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTDMLLI*WGGQGH
Trigger: GTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGGCGGACCAGGTCGCTaGGCTTGCGGAACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYGGPGR*ACGTPW
Trigger: CCAAGGAGTTCCGCAAGCCCAGCGACCTGGTCCGCC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGTCACTGTAAAACCTTaGGGTAGCCCTGCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVVTVKP*GSPAGS
Trigger: CGAACCAGCAGGGCTACCCCAAGGTTTTACAGTGAC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACGGATCTTGGCTAACTaGGCTGTCTCCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASARILAN*AVSSSV
Trigger: CACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCCG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGTCAGACTTCCCTTCGTaGAGAAGGCGTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLSDFPS*RRRCCR
Trigger: TCTGCAGCAACGCCTTCTCCACGAAGGGAAGTCTGA...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTTGGCCCACCAGTCCTaGTTGCAGCAGATTCTGATC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLAHQS*LQQILI
Trigger: GATCAGAATCTGCTGCAACCAGGACTGGTGGGCCAA...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTTGGCCCACCAGTCCTaGTTGCAGCAGATTCTGATC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYLAHQS*LQQILI
Trigger: GATCAGAATCTGCTGCAACCAGGACTGGTGGGCCAA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATCGCAGAGGTCACTGTaGGCTGTAAGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASASQRSL*AVRTGL
Trigger: CAGGCCTGTCCTTACAGCCCACAGTGACCTCTGCGA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCAGGGTAATTTCCTGTaGAGACCCCGAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVQGNFL*RPRGRR
Trigger: ACGTCTTCCTCGGGGTCTCCACAGGAAATTACCCTG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGTTCTGAGTCGAGATaGCCGATGGAGACATCGGTG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYGSESR*PMETSV
Trigger: CACCGATGTCTCCATCGGCCATCTCGACTCAGAACC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCCCTCCTTCTCTGGCTaGTTGCCCGGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYPSFSG*LPGARF
Trigger: GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAAAAGAGGGGCCGGCCTaGTGTGTCTGCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEKEGPA*CVCMCS
Trigger: GGAGCACATGCAGACACACCAGGCCGGCCCCTCTTT...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGCAGCGCACTCTTCTaGTTGAAGGCTTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLCSALF*LKAFSQ
Trigger: TTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTGCA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCAGCTGAATCCTTATTaGTGGGTCAGGTTTACTCGA +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFQLNPY*WVRFTR
Trigger: TCGAGTAAACCTGACCCACCAATAAGGATTCAGCTG...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 72 bp CCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTaGGTTTGGCAAATGCCTTCTCACAAGTGTCACATT +
Preference number: 4 (lower is better)
Translates to: PLYVCGCGAPAG*VWQMPSHKCHI
Trigger: AATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTCCCTCATGTGGCGTTaGAACTGGGATTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTSLMWR*NWDSFG
Trigger: TCCAAAAGAATCCCAGTTTCAACGCCACATGAGGGA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGCGGACACGAATACGTaGATCCACTTCTGTCGATAT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFADTNT*IHFCRY
Trigger: ATATCGACAGAAGTGGATTCACGTATTCGTGTCCGC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCTCTGTAGAACTTGTTaGATTCTGTGGCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTLCRTC*ILWPTH
Trigger: ATGGGTGGGCCACAGAATTCAACAAGTTCTACAGAG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGTGGCCGTTAAAACATaGGCAGTCTCTGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAVAVKT*AVSVEL
Trigger: AAGTTCTACAGAGACTGCTCATGTTTTAACGGCCAC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTCTTCTCGTGGGACTTaGGGACCCCAGAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYSSRGT*GPQRKQ
Trigger: TTGTTTCCTCTGGGGTCCTCAAGTCCCACGAGAAGA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATGCACACACTGCAGCTaGACGCCTTCACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASACTHCS*TPSLLC
Trigger: ACACAGGAGTGAAGGCGTTCAGCTGCAGTGTGTGCA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATAAGTCATCACTTGAGTaGGGTCTTGGGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYKSSLE*GLGSHC
Trigger: GCAGTGGGACCCAAGACCTCACTCAAGTGATGACTT...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTGTGGCTCACTAGTATaGCTTGCGGCGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRACGSLV*LAASLL
Trigger: GAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGAGCACCGCCGCCGATaGGAAGGCGCGGTCACACTC +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGEHRRR*EGAVTL
Trigger: GAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCAGCCACGGAGGAGACTaGGGAGGAAACTGCCTACAG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRASHGGD*GGNCLQ
Trigger: CTGTAGGCAGTTTCCTCCTCAGTCTCCTCCGTGGCT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGCCCGTGTGGACAGCTaGATCCTTATTGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAARVDS*ILIGGS
Trigger: TGACCCACCAATAAGGATTCAGCTGTCCACACGGGC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGCCAGGTTTACACACTaGCATTCAAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFARFTH*HSRKET
Trigger: GGTTTCCTTCCTTGAATGTCAGTGTGTAAACCTGGC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACATGGCAAGCCACACCATaGCAAAGAACATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GNAAAWALSSRWDSTHATWQATP*QRTCLC
Trigger: GCAGAGACATGTTCTTTGTCATGGTGTGGCTTGCCA...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCCGTGCATGGGGGTCTaGGGAGGGGAATCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLPCMGV*GGESVR
Trigger: CCGAACGGATTCCCCTCCTCAGACCCCCATGCACGG...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCAGGCCTTGCAGGCATaGTGCCGGGTTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLQALQA*CRVPAS
Trigger: GCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACATTGATCATGTGGGTCTaGAGTGCCCCCTTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: GNAAAWALSSRWDSTHATLIMWV*SAPFWL
Trigger: TAACCAGAAGGGGGCACTGCAGACCCACATGATCAA...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTCTGTGGGGTCCGTCTaGTCATTTGAAACGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYSVGSV*SFETLE
Trigger: TTCCAGCGTTTCAAATGAGCAGACGGACCCCACAGA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTTCTTTTTCTTGCTCTaGGTCTGTGGGGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYFFFLL*VCGVRL
Trigger: CAGACGGACCCCACAGACGCAGAGCAAGAAAAAGAA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGCAGGTTTACGCTGGTaGCTCATTTTCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAAGLRW*LIFLNS
Trigger: GGAATTAAGGAAAATGAGGCACCAGCGTAAACCTGC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGCCAACACGGACCTTTaGAGGTTTACGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAANTDL*RFTLVP
Trigger: AGGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTGCTTTGAGCACGCCTaGAGAAACAAAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMCFEHA*RNKASS
Trigger: GGAAGAGGCTTTGTTTCTGCAGGCGTGCTCAAAGCA...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTGTGTTCTGATGTGTaGTTTGAGCACGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYVCSDV*FEHACR
Trigger: TCTGCAGGCGTGCTCAAAGCACACATCAGAACACAC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGGTGTGTTCTGATGTGTaGTTTGAGCACGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLVCSDV*FEHACR
Trigger: TCTGCAGGCGTGCTCAAAGCACACATCAGAACACAC...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTCTGCTGGTCTACAGTaGTGTCATCTATCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVSAGLQ*CHLSRL
Trigger: CAGCCTCGATAGATGACAGCACTGTAGACCAGCAGA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAACCACCTCTGCCGTCTaGGGCAGCTCGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGTTSAV*GSSSLS
Trigger: CGAGAGCGACGAGCTGCCGCAGACGGCAGAGGTGGT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGCCCTGCTTCCTCCGTaGCCACCACATGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYALLPP*PPHAEA
Trigger: AGCCTCAGCATGTGGTGGGCACGGAGGAAGCAGGGC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATGGGAACCTTGTGCCTaGAGGTCCAGTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAWEPCA*RSSSSW
Trigger: CCAAGAGGAACTGGACCTGCAGGCACAAGGTTCCCA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATTTTCTGCCGCGGACTaGACCAGGACCTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAFSAAD*TRTFSD
Trigger: GTCAGAGAAGGTCCTGGTGCAGTCCGCGGCAGAAAA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGCTTAAGCTACAGATATaGTTCTTATTTGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLLKLQI*FLFAGV
Trigger: CACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAG...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACAGTTATTCTGCATATaGGGCTACAGCCAGGTTTAC +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLQLFCI*GYSQVY
Trigger: GTAAACCTGGCTGTAGCCGCATATGCAGAATAACTG...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCAATGTTTGGGGGCACTaGTCACATCGATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVNVWGH*SHRCGL
Trigger: CAAGCCACATCGATGTGACCAGTGCCCCCAAACATT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCAGAGGTCTTGGCATaGCAGGAGTCATTAGGATGT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYAEVLA*QESLGC
Trigger: ACATCCTAATGACTCCTGCCATGCCAAGACCTCTGC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGGCGGACCAGGTCGCTaGGCTTGCGGAACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLGGPGR*ACGTPW
Trigger: CCAAGGAGTTCCGCAAGCCCAGCGACCTGGTCCGCC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGGTCAGTTATGAGGATTaGTTCCTGCAAAGGAATATC +
Preference number: 4 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLVSYED*FLQRNI
Trigger: GATATTCCTTTGCAGGAACCAATCCTCATAACTGAC...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATCGCAGAGGGTCCTGTaGAGCCACAAACCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASASQRVL*SHKPIF
Trigger: GAAGATGGGTTTGTGGCTCCACAGGACCCTCTGCGA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGAGACTCAAGTGTGCTaGAATCCTGTAGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFETQVC*NPVAVG
Trigger: TCCAACAGCTACAGGATTCCAGCACACTTGAGTCTC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGCAGAGGGGACTGTTTaGTGTCTCTTCATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFAEGTV*CLFMCF
Trigger: AAAGCACATGAAGAGACACCAAACAGTCCCCTCTGC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGCTTTTCTCCAGTATaGATTCGAACATGCCTCACC +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFGFSPV*IRTCLT
Trigger: GGTGAGGCATGTTCGAATCCATACTGGAGAAAAGCC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGGGCCTTCTTTGGGTCTaGTTTATAATGAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLGLLWV*FIMKLH
Trigger: ATGCAGTTTCATTATAAACCAGACCCAAAGAAGGCC...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGAGAGAGCTGTTCTGTaGGGCCAGGCCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLERAVL*GQARLP
Trigger: GGGGAGCCTGGCCTGGCCCCACAGAACAGCTCTCTC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAAGGAAGACGTGGCAGTaGGCCCAGCGGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGRKTWQ*AQRPVP
Trigger: TGGCACAGGCCGCTGGGCCCACTGCCACGTCTTCCT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGGTTCTGAGTCGAGATaGCCGATGGAGACATCGGTG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAGSESR*PMETSV
Trigger: CACCGATGTCTCCATCGGCCATCTCGACTCAGAACC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGAGCCTGCTCCACCCTaGCCCGAGAGAGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLEPAPP*PEREGS
Trigger: GGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTGCACCTCCTTGCTGTaGTGCATGAGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYCTSLL*CMSTAA
Trigger: GGCGGCGGTGCTCATGCACCACAGCAAGGAGGTGCA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATCCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTA +
Preference number: 4 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHPTCDV*LVLLQL
Trigger: TAATTGCAGAAGCACAAGCCATACATCGCAGGTAGG...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGGGTGGGATTTGGTTTaGGACATGTTTTATGTGGCA +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAGWDLV*DMFYVA
Trigger: TGCCACATAAAACATGTCCCAAACCAAATCCCACCC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACAGCTCAGTGGCCTTTaGCGTACGATCTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLQLSGL*RTIFSL
Trigger: TAATGAAAAGATCGTACGCCAAAGGCCACTGAGCTG...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CAA 72 bp GGATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTaGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GFVALSYRYASY*LGWTGPPLLAP
Trigger: AGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 72 bp GTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTaGGGACATGTTTTATGTGGCACCATTGACGATACT +
Preference number: 4 (lower is better)
Translates to: VHALCPARVGFG*GHVLCGTIDDT
Trigger: AGTATCGTCAATGGTGCCACATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 72 bp TGCTTCTTCATGTGCACCTGCAGCGCACTCTTCTGGTaGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGC +
Preference number: 4 (lower is better)
Translates to: CFFMCTCSALFW*KAFSQSVQWNG
Trigger: GCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTGCAGGTGCACATGAAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGTGGCCGTTAAAACATaGGCAGTCTCTGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFVAVKT*AVSVEL
Trigger: AAGTTCTACAGAGACTGCTCATGTTTTAACGGCCAC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAATCTCCACCTGCATTTaGGTGGAGGCCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEISTCI*VEACML
Trigger: GAGCATGCAGGCCTCCACTCAAATGCAGGTGGAGAT...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCAGTTCCTCTTGGGATaGCTCCTGAATCAAGCGAGT +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYQFLLG*LLNQAS
Trigger: ACTCGCTTGATTCAGGAGTCATCCCAAGAGGAACTG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCGCAATGCGGGCATTTaGAGGGCTTGGCTCCCGTGT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYRNAGI*RAWLPC
Trigger: ACACGGGAGCCAAGCCCTTCAAATGCCCGCATTGCG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCAGGTCACCCCCAGCTaGCACAGAGGCAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYQVTPS*HRGREN
Trigger: ATTCTCCCTGCCTCTGTGTCAGCTGGGGGTGACCTG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATCCCCCGTGAGCTGCTaGGCCAATAGGTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGSPVSC*ANRLPC
Trigger: GCAGGGCAACCTATTGGCTCAGCAGCTCACGGGGGA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGCCAGGTTTACACACTaGCATTCAAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVARFTH*HSRKET
Trigger: GGTTTCCTTCCTTGAATGTCAGTGTGTAAACCTGGC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGGCCAGGTTTACACACTaGCATTCAAGGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPARFTH*HSRKET
Trigger: GGTTTCCTTCCTTGAATGTCAGTGTGTAAACCTGGC...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCTTCCCCGCTGTGGGTaGATTTATGAAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYLPRCG*IYEVSG
Trigger: ACCTGACACTTCATAAATGCACCCACAGCGGGGAAG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTGTGGCCCACCCATATaGATCTTGCTGATATGCGTG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYCGPPI*ILLICV
Trigger: CACGCATATCAGCAAGATGCATATGGGTGGGCCACA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAATCTGTGGGGTCCGTCTaGTCATTTGAAACGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRESVGSV*SFETLE
Trigger: TTCCAGCGTTTCAAATGAGCAGACGGACCCCACAGA...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTTCTTTTTCTTGCTCTaGGTCTGTGGGGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYFFFLL*VCGVRL
Trigger: CAGACGGACCCCACAGACGCAGAGCAAGAAAAAGAA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTCTCGTGGGTGTGGATaGGGATGTGGCGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYSRGCG*GCGGPG
Trigger: ACCTGGTCCGCCACATCCGCATCCACACCCACGAGA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGGTCTAACTCCTGTGTaGAGGCGAATGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAGLTPV*RRMCTL
Trigger: CAAGGTGCACATTCGCCTGCACACAGGAGTTAGACC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAGAGGCCTGCATGCTCTaGTGGTCTACAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEEACML*WSTVLS
Trigger: TGACAGCACTGTAGACCAGCAGAGCATGCAGGCCTC...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCGAGTGGAGGCCTGCATaGTCTGCTGGTCTACAGTGC +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVEWRPA*SAGLQC
Trigger: GCACTGTAGACCAGCAGAGCATGCAGGCCTCCACTC...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTTCCAGGGGCTGATCTaGCAACTGCTGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLFQGLI*QLLAQP
Trigger: GGGCTGGGCCAGCAGTTGGCAGATCAGCCCCTGGAA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGGTTCGAAGGACTGTTaGGCAGGGCTCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAGSKDC*AGLCSS
Trigger: TGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGGCTTTTCCCCGGTGTaGGACCGCACATGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYGFSPV*DRTCCF
Trigger: GAAGCAGCATGTGCGGTCGCACACCGGGGAAAAGCC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTGCTGTAGCGTCTGCTaGAGAATGCTTGGATCAATC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYCCSVC*RMLGSI
Trigger: GATTGATCCAAGCATTCTGCAGCAGACGCTACAGCA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGGGCCCAGCGGCCTGTaGCAGGACCTGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVGPSGL*QDLAQA
Trigger: AGCCTGAGCCAGGTCCTGGCACAGGCCGCTGGGCCC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCACTCCAGGCACTGGTaGGCCCGGCCCTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGHSRHW*ARPSFS
Trigger: AGAGAAGGAGGGCCGGGCGCACCAGTGCCTGGAGTG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAATGCGCTCCCGGCCATaGACCTCCTTGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGMRSRP*TSLLWC
Trigger: GCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCAT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCTGTGGTTTCCTACCTaGGATGTATGGCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLWFPT*DVWLVL
Trigger: AAGCACAAGCCATACATCGCAGGTAGGAAACCACAG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATAACAGTTCTGACACATaGACAGGGCACTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYNSSDT*TGHCAD
Trigger: GTCAGCACAGTGCCCTGTGCATGTGTCAGAACTGTT...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCTGCAAGCTGTCAGATaGCATGTCATAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTLQAVR*HVIAFP
Trigger: AGGAAATGCTATGACATGGCATCTGACAGCTTGCAG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCACGACAAGAATTCCTaGTTTGGTGTGGCCTATGAA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTHDKNS*FGVAYE
Trigger: TTCATAGGCCACACCAAACCAGGAATTCTTGTCGTG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGTTCCAGCCAGCTCCTaGCGGTGCTCCTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLVPASS*RCSSMC
Trigger: GCACATGGAGGAGCACCGCCAGGAGCTGGCTGGAAC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTGCAGTGCCCCCTTCTaGTTAAAAGCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYCSAPF*LKAFPH
Trigger: ATGTGGAAAGGCTTTTAACCAGAAGGGGGCACTGCA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGTGTGCTTGATCATGTaGGTCTGCAGTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAVCLIM*VCSAPF
Trigger: GAAGGGGGCACTGCAGACCCACATGATCAAGCACAC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGCTCATTTGAAACGCTaGAAACATCTGGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAAHLKR*KHLGFE
Trigger: CTCAAAACCCAGATGTTTCCAGCGTTTCAAATGAGC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCTCTTCATGCAGTACTaGCACTTGAACGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVLFMQY*HLNALM
Trigger: CATCAAGGCGTTCAAGTGCCAGTACTGCATGAAGAG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGAGGACGAAGGTCGTTGTaGATACCCATGTGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRGRRSL*IPMCRR
Trigger: ACGGCGACACATGGGTATCCACAACGACCTTCGTCC...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCAGAGGGGACTGTTTaGTGTCTCTTCATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYAEGTV*CLFMCF
Trigger: AAAGCACATGAAGAGACACCAAACAGTCCCCTCTGC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCAGTATGTGCAGCAGTTaGCGTGCTTGGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRASMCSS*RAWARP
Trigger: AGGACGAGCCCAAGCACGCCAACTGCTGCACATACT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGGCTTTTCTCCAGTATaGATTCGAACATGCCTCACC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVGFSPV*IRTCLT
Trigger: GGTGAGGCATGTTCGAATCCATACTGGAGAAAAGCC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCGCCTGTGCCAGGACCTaGCTCAGGCTGGAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVACART*LRLELL
Trigger: TAACAACTCCAGCCTGAGCCAGGTCCTGGCACAGGC...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTACACACGGGGCAGCCGTaGATGCGCTCCCGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVHTGQP*MRSRPC
Trigger: GCATGGCCGGGAGCGCATCCACGGCTGCCCCGTGTG...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCTGAATCCTTATTGGTaGGTCAGGTTTACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTLNPYW*VRFTRV
Trigger: GACTCGAGTAAACCTGACCCACCAATAAGGATTCAG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTTGCAGACGGTTCTGTaGTTTCCTACCTGCGATGTA +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLQTVL*FPTCDV
Trigger: TACATCGCAGGTAGGAAACCACAGAACCGTCTGCAA...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGATCTGCCCAGCACGGGTaGGATTTGGTTTGGGACATG +
Preference number: 4 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRSAQHG*DLVWDM
Trigger: CATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGA...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAATCCCTCATGTGGCGTTaGAACTGGGATTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLRESLMWR*NWDSFG
Trigger: TCCAAAAGAATCCCAGTTTCAACGCCACATGAGGGA...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACAGTTCCTCTTGGGATaGCTCCTGAATCAAGCGAGT +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAQFLLG*LLNQAS
Trigger: ACTCGCTTGATTCAGGAGTCATCCCAAGAGGAACTG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTGTGGCTCACTAGTATaGCTTGCGGCGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYCGSLV*LAASLL
Trigger: GAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAACAAGCAGCAGACGCTaGCTGTGGCGTGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGTSSRR*LWRVAH
Trigger: GTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTGT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGGTGCGTGGCGCGCTTaGAGGCCTTCCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVGAWRA*RPSCTR
Trigger: CCGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCAGTTAATTGCTTCGTaGACTAGACACACTAGCCAC +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYQLIAS*TRHTSH
Trigger: GTGGCTAGTGTGTCTAGTTCACGAAGCAATTAACTG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCAAAACTACTCTCTTCTaGAACCAAGGAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVKTTLF*NQGGNE
Trigger: CTCGTTGCCTCCTTGGTTTCAGAAGAGAGTAGTTTT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATGTGGCCCACCCATATaGATCTTGCTGATATGCGTG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASACGPPI*ILLICV
Trigger: CACGCATATCAGCAAGATGCATATGGGTGGGCCACA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGAAGGCGCGGAAGCACTaGGGGCACTTGAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLKARKH*GHLKGF
Trigger: GAAGCCCTTCAAGTGCCCGCAGTGCTTCCGCGCCTT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGCCCTGCTTCCTCCGTaGCCACCACATGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGALLPP*PPHAEA
Trigger: AGCCTCAGCATGTGGTGGGCACGGAGGAAGCAGGGC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGATGTGCTCCTTGAGGTaGGTGGCGCGCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLMCSLR*VARLKA
Trigger: GGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACAT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTCGCCGGCGGCCTCCTaGACCACCTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYSPAAS*TTSSRW
Trigger: CCACCTGGAGGAGGTGGTGCAGGAGGCCGCCGGCGA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATGACAAAAGAGAACAATaGGGTGACACTTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHDKREQ*GDTFPS
Trigger: ACTAGGAAAAGTGTCACCGCATTGTTCTCTTTTGTC...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTGCAGTGCCCCCTTCTaGTTAAAAGCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYCSAPF*LKAFPH
Trigger: ATGTGGAAAGGCTTTTAACCAGAAGGGGGCACTGCA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTGGGTTTTGAGCGTGTaGTGCAGAGGTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAWVLSV*CRGLGM
Trigger: CATGCCAAGACCTCTGCACCACACGCTCAAAACCCA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGGTTTTTCACCTGTATaGGATCTGATGTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: AGVDRATVACSLQTVLWFGFSPV*DLMCCL
Trigger: TAAACAACACATCAGATCCCATACAGGTGAAAAACC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCAGCAGTTGGCGTGCTTaGGCTCGTCCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGSSWRA*ARPAAP
Trigger: CGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCT...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTCAGACTTCCCTTCGTaGAGAAGGCGTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRASDFPS*RRRCCR
Trigger: TCTGCAGCAACGCCTTCTCCACGAAGGGAAGTCTGA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCAGACAGCGGGCCTATaGTCAGGTTCGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYQTAGL*SGSQRS
Trigger: TGACCTCTGCGAACCTGACCATAGGCCCGCTGTCTG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAAAAGAGGGGCCGGCCTaGTGTGTCTGCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGKEGPA*CVCMCS
Trigger: GGAGCACATGCAGACACACCAGGCCGGCCCCTCTTT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCAGCTGAATCCTTATTaGTGGGTCAGGTTTACTCGA +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVQLNPY*WVRFTR
Trigger: TCGAGTAAACCTGACCCACCAATAAGGATTCAGCTG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTGTCGCCAGCCCGTGTaGACAGCTGAATCCTTATTG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRACRQPV*TAESLL
Trigger: CAATAAGGATTCAGCTGTCCACACGGGCTGGCGACA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGAGCACGGGTGGGATTTaGTTTGGGACATGTTTTATG +
Preference number: 4 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPSTGGI*FGTCFM
Trigger: CATAAAACATGTCCCAAACCAAATCCCACCCGTGCT...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCCCCACCTTCACGTTTaGTATCTTTGCAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYPHLHV*YLCKGN
Trigger: ATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCTGTGGGTGCATTTATaGAGTGTCAGGTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLWVHL*SVRLNS
Trigger: TGAATTCAACCTGACACTTCATAAATGCACCCACAG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCATGTGCACGGCCAGCTaGCTCTGCAGAGTAAACTCA +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVMCTAS*LCRVNS
Trigger: TGAGTTTACTCTGCAGAGTCAGCTGGCCGTGCACAT...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGCGGACACGAATACGTaGATCCACTTCTGTCGATAT +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAADTNT*IHFCRY
Trigger: ATATCGACAGAAGTGGATTCACGTATTCGTGTCCGC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATACCATTCTTGACCTCTaGGTGGACTCGCTGCACGTG +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYTILDL*VDSLHV
Trigger: CACGTGCAGCGAGTCCACTCAGAGGTCAAGAATGGT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCCATATGCATCTTGCTaGTATGCGTGTTTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYPYASC*YACLSC
Trigger: GCAGCTTAAACACGCATATCAGCAAGATGCATATGG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCAAGTGGGAAGCAATGTaGGTCTTCCTATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAKWEAM*VFLWPE
Trigger: CTCAGGCCATAGGAAGACTCACATTGCTTCCCACTT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTCTGCTTCCAGGGGCTaGTCTGCCAACTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLSASRG*SANCWP
Trigger: GGGCCAGCAGTTGGCAGATCAGCCCCTGGAAGCAGA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCTTGTGGAGAGGGCCTaGGACTCAAGTGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYLVERA*DSSVLE
Trigger: TTCCAGCACACTTGAGTCTCAGGCCCTCTCCACAAG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTCTTGGGATGACTCCTaGATCAAGCGAGTTGTTACA +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYSWDDS*IKRVVT
Trigger: TGTAACAACTCGCTTGATTCAGGAGTCATCCCAAGA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTGCACACACTGCAGCTaGACGCCTTCACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYCTHCS*TPSLLC
Trigger: ACACAGGAGTGAAGGCGTTCAGCTGCAGTGTGTGCA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCGCCCGACGAGGACATaGCCAGGTTCTGAGTCGAGA +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGRPTRT*PGSESR
Trigger: TCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATAAAACTACTCTCTTCTaGAACCAAGGAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYKTTLF*NQGGNE
Trigger: CTCGTTGCCTCCTTGGTTTCAGAAGAGAGTAGTTTT...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTGCATCTTGCTGATATaGGTGTTTAAGCTGCCTAAA +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTCILLI*VFKLPK
Trigger: TTTAGGCAGCTTAAACACGCATATCAGCAAGATGCA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCGTTTTGAGCGTGTGGTaGAGAGGTCTTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVVLSVW*RGLGMA
Trigger: TGCCATGCCAAGACCTCTGCACCACACGCTCAAAAC...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGTGTGCGTCTTGATGTaGGCTGTCAGCGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYVCVLM*AVSVLF
Trigger: GAAGAGCACGCTGACAGCGCACATCAAGACGCACAC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGCCTTGATGCCGGTGTaGGTCTTGATGTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGALMPV*VLMCAV
Trigger: GACAGCGCACATCAAGACGCACACCGGCATCAAGGC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATATGAGGATTGGTTCCTaGAAAGGAATATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYMRIGS*KGISGT
Trigger: AGTCCCTGATATTCCTTTGCAGGAACCAATCCTCAT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGAGGCCTGCATGCTCTaGTGGTCTACAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYEACML*WSTVLS
Trigger: TGACAGCACTGTAGACCAGCAGAGCATGCAGGCCTC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGGCCTCGGGGTTCGCTaGGACCACCTCTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGGLGVR*DHLCRL
Trigger: CAGACGGCAGAGGTGGTCGCAGCGAACCCCGAGGCC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATACCTGTAAGAGCGCCTaGTCTGGTCCTCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYTCKSA*SGPRCP
Trigger: AGGACAACGAGGACCAGAGCAGGCGCTCTTACAGGT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTACTTATAAGGCTTCATaGTCATATGTGTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LECCRNGVHALCPARVGFTYKAS*SYVWPC
Trigger: ACATGGCCACACATATGAGCATGAAGCCTTATAAGT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTGCTTGGGCTCGTCCTaGAGCTCCGCCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWCLGSS*SSACLS
Trigger: GGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCA...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGGCTTGGCTCCCGTGTaGAGGCGCATGTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWGLAPV*RRMWTF
Trigger: GAAGGTCCACATGCGCCTGCACACGGGAGCCAAGCC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCCTGCTGTAGCGTCTaGTGCAGAATGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVPCCSV*CRMLGS
Trigger: TGATCCAAGCATTCTGCAGCAGACGCTACAGCAGGG...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGCCAATAGGTTGCCCTaGTGTAGCGTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYANRLP*CSVCCR
Trigger: TCTGCAGCAGACGCTACAGCAGGGCAACCTATTGGC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGACTCACTAGTATGACTTaGGGCGAGCCTGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGLTSMT*GEPAPP
Trigger: GGGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAG...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCGGGGCAGCCGTGGATaGGCTCCCGGCCATGCACCT +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFRGSRG*APGHAP
Trigger: AGGTGCATGGCCGGGAGCGCATCCACGGCTGCCCCG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGCTCCCCTGTATGTATaGGGCTGTGGCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGAPLYV*GCGAPA
Trigger: AGCTGGAGCGCCACAGCCGCATACATACAGGGGAGC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTATGGCTTGTGCTTCTaGAATTATGTAACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVYGLCF*NYVTLD
Trigger: GTCCAGGGTTACATAATTGCAGAAGCACAAGCCATA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAGATATGCTTCTTATTTaGTGGGGTGGACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEDMLLI*WGGQGH
Trigger: GTGGCCCTGTCCACCCCAGCAAATAAGAAGCATATC...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACTTCCATCTTTGGAATaGTGTAGGAATGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASALPSLE*CRNGVH
Trigger: GTGCACGCCATTCCTACAGCATTCCAAAGATGGAAG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCAATTACAGTTATTCTaGATATGCGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMQLQLF*ICGYSQ
Trigger: CTGGCTGTAGCCGCATATGCAGAATAACTGTAATTG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCAATGTTTGGGGGCACTaGTCACATCGATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRANVWGH*SHRCGL
Trigger: CAAGCCACATCGATGTGACCAGTGCCCCCAAACATT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCGTTCTCCTCGCGGATaGAGCCAGGTAGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLRSPRG*SQVETV
Trigger: CACCGTTTCTACCTGGCTCCATCCGCGAGGAGAACG...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCGTTCTCCTCGCGGATaGAGCCAGGTAGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLRSPRG*SQVETV
Trigger: CACCGTTTCTACCTGGCTCCATCCGCGAGGAGAACG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGTTTGCAGGTTTACGCTaGTGCCTCATTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTFAGLR*CLIFLN
Trigger: ATTAAGGAAAATGAGGCACCAGCGTAAACCTGCAAA...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCCACCTGCATTTGAGTaGAGGCCTGCATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYPPAFE*RPACSA
Trigger: AGCAGAGCATGCAGGCCTCCACTCAAATGCAGGTGG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGTGTGTGTCTTCTCGTaGGACTTGAGGACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYVCVFS*DLRTPE
Trigger: CTCTGGGGTCCTCAAGTCCCACGAGAAGACACACAC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGTGTGCAGGCGCATGTaGACCTTCAGACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYVCRRM*TFRLPF
Trigger: GAAGGGAAGTCTGAAGGTCCACATGCGCCTGCACAC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGGCCTTCTTTGGGTCTaGTTTATAATGAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: CFLFAGVDRATVACSLQTGLLWV*FIMKLH
Trigger: ATGCAGTTTCATTATAAACCAGACCCAAAGAAGGCC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCAGACAGCGGGCCTATaGTCAGGTTCGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLQTAGL*SGSQRS
Trigger: TGACCTCTGCGAACCTGACCATAGGCCCGCTGTCTG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTA +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYPTCDV*LVLLQL
Trigger: TAATTGCAGAAGCACAAGCCATACATCGCAGGTAGG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGGTGGGATTTGGTTTaGGACATGTTTTATGTGGCA +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYGWDLV*DMFYVA
Trigger: TGCCACATAAAACATGTCCCAAACCAAATCCCACCC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAAAGATGCCAGCTCAGTaGCCTTTGGCGTACGATCTT +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEKMPAQ*PLAYDL
Trigger: AAGATCGTACGCCAAAGGCCACTGAGCTGGCATCTT...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACCACGAAAAGCTCTGTaGTTCCCACTTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAPRKAL*FPLSPQ
Trigger: TTGTGGAGAAAGTGGGAACCACAGAGCTTTTCGTGG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCAGCACGGTGGCTTTTaGCATCACTATCCATTTCTA +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYQHGGF*HHYPFL
Trigger: TAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
3UTR CAA 72 bp GTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTaGGCAAATGCCTTCTCACAAGTGTCACATTTAAAC +
Preference number: 4 (lower is better)
Translates to: VCMRLWRSSWLG*ANAFSQVSHLN
Trigger: GTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGAAACATCTGGGTTTTaGGCGTGTGGTGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYETSGF*ACGAEV
Trigger: GACCTCTGCACCACACGCTCAAAACCCAGATGTTTC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGATCTCCACCTGCATTTaGGTGGAGGCCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLISTCI*VEACML
Trigger: GAGCATGCAGGCCTCCACTCAAATGCAGGTGGAGAT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTATCTCCACCTGCATTTaGGTGGAGGCCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSISTCI*VEACML
Trigger: GAGCATGCAGGCCTCCACTCAAATGCAGGTGGAGAT...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR TCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAAGGACGAGACTTCCGTaGTGCATTTCTGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAERTRLP*CISVRM
Trigger: CATTCTGACAGAAATGCATCACGGAAGTCTCGTCCT...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCCCCCGTGAGCTGCTaGGCCAATAGGTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVSPVSC*ANRLPC
Trigger: GCAGGGCAACCTATTGGCTCAGCAGCTCACGGGGGA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATAAGTCATCACTTGAGTaGGGTCTTGGGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYKSSLE*GLGSHC
Trigger: GCAGTGGGACCCAAGACCTCACTCAAGTGATGACTT...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTGCGAAGTCATCACTTaGGTGAGGTCTTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYCEVIT*VRSWVP
Trigger: TGGGACCCAAGACCTCACTCAAGTGATGACTTCGCA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCACAAGCAGCAGACGCTaGCTGTGGCGTGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFTSSRR*LWRVAH
Trigger: GTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTGT...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCAATACAATACTGATCTaGAGTGCTCGTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRANTILI*SARGEV
Trigger: CACCTCCCCACGAGCACTTCAGATCAGTATTGTATT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCATGTGGGTCTGCAGTaGCCCCTTCTGGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYHVGLQ*PLLVKS
Trigger: GCTTTTAACCAGAAGGGGGCACTGCAGACCCACATG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGGTCTAACTCCTGTGTaGAGGCGAATGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYGLTPV*RRMCTL
Trigger: CAAGGTGCACATTCGCCTGCACACAGGAGTTAGACC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGCCAACACGGACCTTTaGAGGTTTACGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGANTDL*RFTLVP
Trigger: AGGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTCAAACTGGTCTACGTaGCCTCGCAGAGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLSNWST*PRRGSC
Trigger: ACAGGACCCTCTGCGAGGGCACGTAGACCAGTTTGA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTGTTGCGCAGGGCTCTaGTCTTCAAACTGGTCTACG +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYCCAGL*SSNWST
Trigger: CGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATAAACTGGGAACCTTGTaGCTGCAGGTCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYKLGTL*LQVQFL
Trigger: GAGGAACTGGACCTGCAGGCACAAGGTTCCCAGTTT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGTGTGCGACCGCACATaGTGCTTCAGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWVCDRT*CFRWLD
Trigger: GTCCAGCCACCTGAAGCAGCATGTGCGGTCGCACAC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTATATGTGTGGCCATGTaGCGGGTGAGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSICVAM*RVRLPL
Trigger: CAATGGCAGCCTCACCCGGCACATGGCCACACATAT...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCACTTATAAGGCTTCATaGTCATATGTGTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVTYKAS*SYVWPC
Trigger: ACATGGCCACACATATGAGCATGAAGCCTTATAAGT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTTTTCTGCCGCGGACTaGACCAGGACCTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLFSAAD*TRTFSD
Trigger: GTCAGAGAAGGTCCTGGTGCAGTCCGCGGCAGAAAA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATCTTGGGGCAGTATGTaGAGCAGTTGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGSWGSM*SSWRAW
Trigger: CCAAGCACGCCAACTGCTGCACATACTGCCCCAAGA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCCCTGCTGTAGCGTCTaGTGCAGAATGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYPCCSV*CRMLGS
Trigger: TGATCCAAGCATTCTGCAGCAGACGCTACAGCAGGG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTGCCAATAGGTTGCCCTaGTGTAGCGTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSANRLP*CSVCCR
Trigger: TCTGCAGCAGACGCTACAGCAGGGCAACCTATTGGC...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGCTGAGCCAATAGGTTaGCCTGCTGTAGCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGAEPIG*PAVASA
Trigger: AGCAGACGCTACAGCAGGGCAACCTATTGGCTCAGC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCCTTCTCTGGCTGGTTaGCCGGGGCCAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYPSLAG*PGPGSQ
Trigger: CTGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTTCTTCATGTGCACCTaGAGCGCACTCTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVFFMCT*SALFWL
Trigger: CAACCAGAAGAGTGCGCTGCAGGTGCACATGAAGAA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCTTAAGCTACAGATATaGTTCTTATTTGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVLKLQI*FLFAGV
Trigger: CACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGCTTAAGCTACAGATATaGTTCTTATTTGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMLKLQI*FLFAGV
Trigger: CACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAG...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAAAATACATCTGTTTATaGACGAAGAGAAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLKYICL*TKRKSW
Trigger: CCATGACTTTCTCTTCGTGCATAAACAGATGTATTT...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGTGGGACTCCACACATaGTACATGCCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGVGLHT*YMPPAS
Trigger: GGAAGCAGGAGGCATGTAGCATGTGTGGAGTCCCAC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTGCAGTGCCCCCTTCTaGTTAAAAGCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRACSAPF*LKAFPH
Trigger: ATGTGGAAAGGCTTTTAACCAGAAGGGGGCACTGCA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGCCTGGGAGCTCGGCTaGCTTGAGGCCGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFAWELG*LEADVA
Trigger: AGCCACGTCGGCCTCAAGCCAGCCGAGCTCCCAGGC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATCGCAGAGGGTCCTGTaGAGCCACAAACCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGSQRVL*SHKPIF
Trigger: GAAGATGGGTTTGTGGCTCCACAGGACCCTCTGCGA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCTCTGCTCTTCAAACTaGTCTACGTGCCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYLCSSN*STCPRR
Trigger: TCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTCATCCCATCAGAGCTaGGAGCCTGCAGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLSSHQS*EPAASS
Trigger: AGAGCTTGCTGCAGGCTCCCAGCTCTGATGGGATGA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTTGGCCCACCAGTCCTaGTTGCAGCAGATTCTGATC +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYLAHQS*LQQILI
Trigger: GATCAGAATCTGCTGCAACCAGGACTGGTGGGCCAA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGAGAGAGCTGTTCTGTaGGGCCAGGCCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYERAVL*GQARLP
Trigger: GGGGAGCCTGGCCTGGCCCCACAGAACAGCTCTCTC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGTGCTGTCCGATGTCTaGAGAGAGCTGTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLVLSDV*RELFCG
Trigger: CCCACAGAACAGCTCTCTCCAGACATCGGACAGCAC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGTGCTGTCCGATGTCTaGAGAGAGCTGTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGVLSDV*RELFCG
Trigger: CCCACAGAACAGCTCTCTCCAGACATCGGACAGCAC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGAGCCTGCTCCACCCTaGCCCGAGAGAGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGEPAPP*PEREGS
Trigger: GGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGCTGACTGTGGCGTGTaGCTCACTAGTATGACTTGC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYADCGV*LTSMTC
Trigger: GCAAGTCATACTAGTGAGCCACACGCCACAGTCAGC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGAACACTCTTGGCTTCTaGGAGCTCAAAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLNTLGF*ELKEGP
Trigger: CGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGTGTT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCACATTTAAACACTCTTaGCTTCTGGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVTFKHS*LLGAQR
Trigger: TCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGACATTTAAACACTCTTaGCTTCTGGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLTFKHS*LLGAQR
Trigger: TCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGT...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAAGCACGGGTGGGATTTaGTTTGGGACATGTTTTATG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASASTGGI*FGTCFM
Trigger: CATAAAACATGTCCCAAACCAAATCCCACCCGTGCT...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAGATACGACATTAAATTaGGTGGTGCGTGTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEDTTLN*VVRVGA
Trigger: AGCGCCTACACGCACCACCCAATTTAATGTCGTATC...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCTTTTCATTAGAATATaGGAAAGGTGTAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYLFIRI*ERCRGP
Trigger: GGGGCCTCTACACCTTTCCCATATTCTAATGAAAAG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCACCATTCTTGACCTCTaGGTGGACTCGCTGCACGTG +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGTILDL*VDSLHV
Trigger: CACGTGCAGCGAGTCCACTCAGAGGTCAAGAATGGT...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGAAACATCTGGGTTTTaGGCGTGTGGTGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLETSGF*ACGAEV
Trigger: GACCTCTGCACCACACGCTCAAAACCCAGATGTTTC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTGCCGGTGTGCGTCTTaGTGTGCGCTGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYCRCAS*CALSAC
Trigger: GCACGCTGACAGCGCACATCAAGACGCACACCGGCA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTGCCGGTGTGCGTCTTaGTGTGCGCTGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGCRCAS*CALSAC
Trigger: GCACGCTGACAGCGCACATCAAGACGCACACCGGCA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGTGCCCACCACATGCTaGGGCTCCAGGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYVPTTC*GSRSSM
Trigger: CATGCTGGACCTGGAGCCTCAGCATGTGGTGGGCAC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAATCTTGGGATGACTCCTaGATCAAGCGAGTTGTTACA +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAESWDDS*IKRVVT
Trigger: TGTAACAACTCGCTTGATTCAGGAGTCATCCCAAGA...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTGTCTCTCCAGTGGCTaGCACAGCAGAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLCLSSG*HSRGDC
Trigger: ACAGTCCCCTCTGCTGTGTCAGCCACTGGAGAGACA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGCTGCAGTCCTTCCGATaGGCTTCGAGTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLLQSFR*ASSHRL
Trigger: AAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAG...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCAGCCACGGAGGAGACTaGGGAGGAAACTGCCTACAG +
Preference number: 4 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFSHGGD*GGNCLQ
Trigger: CTGTAGGCAGTTTCCTCCTCAGTCTCCTCCGTGGCT...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCAAAACTACTCTCTTCTaGAACCAAGGAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAKTTLF*NQGGNE
Trigger: CTCGTTGCCTCCTTGGTTTCAGAAGAGAGTAGTTTT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATGACTGGGTGCCGTTaGATAAAGCAGCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAMTGCR*IKQQMK
Trigger: TTTCATTTGCTGCTTTATTCAACGGCACCCAGTCAT...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGTGATGCTCAGCTGCTaGCCAGGCTGCGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFVMLSC*PGCGDC
Trigger: GCAGTCCCCGCAGCCTGGGCAGCAGCTGAGCATCAC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATACTGTGATGCTCAGCTaGTGCCCAGGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYTVMLS*CPGCGD
Trigger: GTCCCCGCAGCCTGGGCAGCAGCTGAGCATCACAGT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGGTCTAACTCCTGTGTaGAGGCGAATGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLGLTPV*RRMCTL
Trigger: CAAGGTGCACATTCGCCTGCACACAGGAGTTAGACC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTCTGCTGGTCTACAGTaGTGTCATCTATCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYSAGLQ*CHLSRL
Trigger: CAGCCTCGATAGATGACAGCACTGTAGACCAGCAGA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTGTTGCGCAGGGCTCTaGTCTTCAAACTGGTCTACG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLCCAGL*SSNWST
Trigger: CGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGGTTCGAAGGACTGTTaGGCAGGGCTCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGGSKDC*AGLCSS
Trigger: TGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGGCCTGCAGCAAGCTCTaGTGGTGGAAGCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLACSKL*WWKLVE
Trigger: CTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGC...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATACCGTGGCGCTCTCCTaGGGCCGGATCTTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYTVALS*GRILAN
Trigger: GTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCCTGCAGCTCCGCCTaGTTGTCCCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVSCSSA*LSLSSL
Trigger: CAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGTGCAGCAGTTGGCGTaGTTGGGCTCGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGVQQLA*LGSSCS
Trigger: GCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCAC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTAGTGCAGCAGTTGGCGTaGTTGGGCTCGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLVQQLA*LGSSCS
Trigger: GCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCAC...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCCTTCTCTGGCTGGTTaGCCGGGGCCAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFPSLAG*PGPGSQ
Trigger: CTGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAACCTCCTTGCTGTGGTaGATGAGCACCGCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVTSLLW*MSTAAD
Trigger: ATCGGCGGCGGTGCTCATGCACCACAGCAAGGAGGT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTTCATGTTGCTCTTCTaGGTGAAGCCCATGACGCAG +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYFMLLF*VKPMTQ
Trigger: CTGCGTCATGGGCTTCACGCAGAAGAGCAACATGAA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATGCGCCCGCTTCATGTaGAGCTTCATGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGCARFM*SFMLLF
Trigger: GAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGGCGTGCACGCACTCTaGCCAGCACGGGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGGVHAL*PARVGF
Trigger: AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCCATCCCCTAGTTAAGTaGCAGACAAGCACTGATGTT +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAHPLVK*QTSTDV
Trigger: AACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATAATGTTTGGGGGCACTaGTCACATCGATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYNVWGH*SHRCGL
Trigger: CAAGCCACATCGATGTGACCAGTGCCCCCAAACATT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGTTCCAGCCAGCTCCTaGCGGTGCTCCTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGVPASS*RCSSMC
Trigger: GCACATGGAGGAGCACCGCCAGGAGCTGGCTGGAAC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGTGTGCTTGATCATGTaGGTCTGCAGTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGVCLIM*VCSAPF
Trigger: GAAGGGGGCACTGCAGACCCACATGATCAAGCACAC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATAGCTCCAGGAGCTGCTaGATGACGTCGCTCACCGCC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYSSRSC*MTSLTA
Trigger: GGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATGGGTTTTGAGCGTGTaGTGCAGAGGTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGWVLSV*CRGLGM
Trigger: CATGCCAAGACCTCTGCACCACACGCTCAAAACCCA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAGCAAGCTCATATCTGTaGGTTTTCATGTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SIAVRPLHVQLHVALLREASSYL*VFMCFL
Trigger: CAAAAAGCACATGAAAACCCACAGATATGAGCTTGC...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGTCACTGTAAAACCTTaGGGTAGCCCTGCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLVTVKP*GSPAGS
Trigger: CGAACCAGCAGGGCTACCCCAAGGTTTTACAGTGAC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGAGCAAGCTCTGCTGGTaGAAGCTTGTGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLSKLCW*KLVERA
Trigger: GGCCCTCTCCACAAGCTTCCACCAGCAGAGCTTGCT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTACCTGCGGCCGGATCTTaGCTAACTGGGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVPAAGS*LTGLSP
Trigger: AGGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGG...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGCAGCCAACTGTAACTaGATGCCTTCTAGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLAANCN*MPSRVA
Trigger: GGCTACCCTAGAAGGCATCCAGTTACAGTTGGCTGC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTCGCAGAGGTCACTGTaGGCTGTAAGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLSQRSL*AVRTGL
Trigger: CAGGCCTGTCCTTACAGCCCACAGTGACCTCTGCGA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAAGGGTGGGATTTGGTTTaGGACATGTTTTATGTGGCA +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEGWDLV*DMFYVA
Trigger: TGCCACATAAAACATGTCCCAAACCAAATCCCACCC...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGATCTGAAGTGCTCGTaGGGAGGTGAAACTGACGCT +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGDLKCS*GGETDA
Trigger: AGCGTCAGTTTCACCTCCCCACGAGCACTTCAGATC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGATCTGAAGTGCTCGTaGGGAGGTGAAACTGACGCT +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLDLKCS*GGETDA
Trigger: AGCGTCAGTTTCACCTCCCCACGAGCACTTCAGATC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTTATCCTCAAAACCCTaGTTATACATGAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYLSSKP*LYMRPR
Trigger: TCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCTCTGTAGAACTTGTTaGATTCTGTGGCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYLCRTC*ILWPTH
Trigger: ATGGGTGGGCCACAGAATTCAACAAGTTCTACAGAG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGGCGAATGTGCACCTTaGGGCTGCCAGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGGECAP*GCQRWR
Trigger: TCTCCACCTCTGGCAGCCTCAAGGTGCACATTCGCC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTAAGTGGGAAGCAATGTaGGTCTTCCTATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLKWEAM*VFLWPE
Trigger: CTCAGGCCATAGGAAGACTCACATTGCTTCCCACTT...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTGCAGACGTGACAGCTaGAGAGCTTCTGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGCRRDS*RASDLC
Trigger: ACACAGGTCAGAAGCTCTTCAGCTGTCACGTCTGCA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCGCAATGCGGGCATTTaGAGGGCTTGGCTCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYRNAGI*RAWLPC
Trigger: ACACGGGAGCCAAGCCCTTCAAATGCCCGCATTGCG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTACTGAGATGGGCTGGATaGCAACACTGGCAGGGACCG +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLLRWAG*QHWQGP
Trigger: CGGTCCCTGCCAGTGTTGTCATCCAGCCCATCTCAG...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACTGAGATGGGCTGGATaGCAACACTGGCAGGGACCG +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRLRWAG*QHWQGP
Trigger: CGGTCCCTGCCAGTGTTGTCATCCAGCCCATCTCAG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTGCGAAGTCATCACTTaGGTGAGGTCTTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGCEVIT*VRSWVP
Trigger: TGGGACCCAAGACCTCACTCAAGTGATGACTTCGCA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAAGAGAGAGGGATCCGTaGGGAGCGCTGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRRERDP*GALGTA
Trigger: AGCAGTTCCCAGCGCTCCTCACGGATCCCTCTCTCT...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTACTTTCTTGCAGGCCTTaGAGGCATGCTGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVLSCRP*RHAAGF
Trigger: GAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAG...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTTGATCATGTGGGTCTaGAGTGCCCCCTTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLLIMWV*SAPFWL
Trigger: TAACCAGAAGGGGGCACTGCAGACCCACATGATCAA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGAGAGCTCCAGGAGCTaGTGGATGACGTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGESSRS*WMTSLT
Trigger: GGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCTGGAATATTCGTCTTaGCAACACGGACCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYLEYSS*QHGPLQ
Trigger: CTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTGTTGCGCAGGGCTCTaGTCTTCAAACTGGTCTACG +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGCCAGL*SSNWST
Trigger: CGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATCAGAGCTGGGAGCCTaGAGCAAGCTCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRSELGA*SKLCWW
Trigger: CCACCAGCAGAGCTTGCTGCAGGCTCCCAGCTCTGA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTAGGCTTTTCCCCGGTGTaGGACCGCACATGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLGFSPV*DRTCCF
Trigger: GAAGCAGCATGTGCGGTCGCACACCGGGGAAAAGCC...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGATGCGGTCCTTTTCTaGCGCGGACTGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYDAVLF*RGLHQD
Trigger: GTCCTGGTGCAGTCCGCGGCAGAAAAGGACCGCATC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGGCTTGGCTCCCGTGTaGAGGCGCATGTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFGLAPV*RRMWTF
Trigger: GAAGGTCCACATGCGCCTGCACACGGGAGCCAAGCC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGAGGAGGTTTACAGGCTaGAGTCCTTCCGATGAGCTT +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLRRFTG*SPSDEL
Trigger: AAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTGCTGTAGCGTCTGCTaGAGAATGCTTGGATCAATC +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYCCSVC*RMLGSI
Trigger: GATTGATCCAAGCATTCTGCAGCAGACGCTACAGCA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTATGCGCTCCCGGCCATaGACCTCCTTGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFMRSRP*TSLLWC
Trigger: GCACCACAGCAAGGAGGTGCATGGCCGGGAGCGCAT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCCGGCCTGGTGTGTCTaGATGTGCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYPAWCV*MCSLRC
Trigger: GCACCTCAAGGAGCACATGCAGACACACCAGGCCGG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAGCTCCCCTGTATGTATaGGGCTGTGGCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRAPLYV*GCGAPA
Trigger: AGCTGGAGCGCCACAGCCGCATACATACAGGGGAGC...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGCTTTCTCACAAAGCGTaGAATGGAACGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLLSHKA*NGTAAP
Trigger: GGGAGCGGCCGTTCCATTGCACGCTTTGTGAGAAAG...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATTCTTCATGTGCACCTaGAGCGCACTCTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGFFMCT*SALFWL
Trigger: CAACCAGAAGAGTGCGCTGCAGGTGCACATGAAGAA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATTCATGTTGCTCTTCTaGGTGAAGCCCATGACGCAG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGFMLLF*VKPMTQ
Trigger: CTGCGTCATGGGCTTCACGCAGAAGAGCAACATGAA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCCGTTGCTTGCTCCTTaGAGACGGTTCTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGPLLAP*RRFCGF
Trigger: GAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATAAATACATCTGTTTATaGACGAAGAGAAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYKYICL*TKRKSW
Trigger: CCATGACTTTCTCTTCGTGCATAAACAGATGTATTT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGCTGTAGGAATGGCGTaGACGCACTCTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGAVGMA*THSAQH
Trigger: GTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCTTCCATCTTTGGAATaGTGTAGGAATGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYLPSLE*CRNGVH
Trigger: GTGCACGCCATTCCTACAGCATTCCAAAGATGGAAG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCACGTTTGGTATCTTTaGAAAGGCAATTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYHVWYL*KGNSFF
Trigger: AAAGAATGAATTGCCTTTGCAAAGATACCAAACGTG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGAAAGAACTGCCCCGATaGCTGTGTAGGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWKELPR*LCREGE
Trigger: CTCACCCTCCCTACACAGGCATCGGGGCAGTTCTTT...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGAACGCTGGAAACATCTaGGTTTTGAGCGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLNAGNI*VLSVWC
Trigger: GCACCACACGCTCAAAACCCAGATGTTTCCAGCGTT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGGCTTGCGGAACTCCTTaGCGCAGTAGGGACACACAT +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLACGTP*RSRDTH
Trigger: ATGTGTGTCCCTACTGCGCCAAGGAGTTCCGCAAGC...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTCATCCCATCAGAGCTaGGAGCCTGCAGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLSSHQS*EPAASS
Trigger: AGAGCTTGCTGCAGGCTCCCAGCTCTGATGGGATGA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCGTGTGTGTCTTCTCGTaGGACTTGAGGACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFVCVFS*DLRTPE
Trigger: CTCTGGGGTCCTCAAGTCCCACGAGAAGACACACAC...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCCATGATAAACACGTTTaGGTCAGTAGAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAHDKHV*VSRGGV
Trigger: AACTCCTCCTCTACTGACCCAAACGTGTTTATCATG...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGCTGACTGTGGCGTGTaGCTCACTAGTATGACTTGC +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGADCGV*LTSMTC
Trigger: GCAAGTCATACTAGTGAGCCACACGCCACAGTCAGC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGTATGTATGCGGCTGTaGCGCTCCAGCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVVCMRL*RSSWLG
Trigger: ACCAAGCCAGCTGGAGCGCCACAGCCGCATACATAC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTCGCATCAGAAGACGTaGGTGAGGGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYSHQKT*VRACHS
Trigger: CGAGTGGCAGGCCCTCACCCACGTCTTCTGATGCGA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCAGGTTCCTCAATGACTaGGTGCCGTTGAATAAAGCA +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVRFLND*VPLNKA
Trigger: TGCTTTATTCAACGGCACCCAGTCATTGAGGAACCT...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGCATTATCTAGCAGGTaGGACTCCACACATGCTACA +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYALSSR*DSTHAT
Trigger: TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTTCCCTCATGTGGCGTTaGAACTGGGATTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLSLMWR*NWDSFG
Trigger: TCCAAAAGAATCCCAGTTTCAACGCCACATGAGGGA...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATGTGGCCGTTAAAACATaGGCAGTCTCTGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYVAVKT*AVSVEL
Trigger: AAGTTCTACAGAGACTGCTCATGTTTTAACGGCCAC...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATGTCTCTCCAGTGGCTaGCACAGCAGAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRCLSSG*HSRGDC
Trigger: ACAGTCCCCTCTGCTGTGTCAGCCACTGGAGAGACA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATGTCCCTCAGCTCACTaGTGCGGTCCTTTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRCPSAH*CGPFLP
Trigger: CGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCCTGCAGTCCTTCCGATaGGCTTCGAGTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFLQSFR*ASSHRL
Trigger: AAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAG...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGACATGACCAGGTTCTaGGTCGAGATGGCCGATGGA +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVDMTRF*VEMADG
Trigger: TCCATCGGCCATCTCGACTCAGAACCTGGTCATGTC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACCAGATAGCATACCCTaGGTATCGGCCAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRPDSIP*VSASVS
Trigger: GCTGACGCTGGCCGATACTCAGGGTATGCTATCTGG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGCCCGTGTGGACAGCTaGATCCTTATTGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVARVDS*ILIGGS
Trigger: TGACCCACCAATAAGGATTCAGCTGTCCACACGGGC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGTGCCAGACAAGCACTaGTGTTCATGTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVVPDKH*CSCPTS
Trigger: GCTGGTGGGACATGAACATCAGTGCTTGTCTGGCAC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAAAGGCCCATGAGGTGTaGGAAAGCTCGCTGAAACGC +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVKAHEV*ESSLKR
Trigger: GCGTTTCAGCGAGCTTTCGCACACCTCATGGGCCTT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCTTCCCCGCTGTGGGTaGATTTATGAAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGLPRCG*IYEVSG
Trigger: ACCTGACACTTCATAAATGCACCCACAGCGGGGAAG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAACTGTTTTCTAAGGCTTaGTGTAAAATGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAELFSKA*CKMSWL
Trigger: CAACCAGGACATTTTACAGCAAGCCTTAGAAAACAG...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGACTGGAATATTCGTCTTaGCAACACGGACCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGLEYSS*QHGPLQ
Trigger: CTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAG...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCGTCATCTATCGAGGCTaGCTGCTGATGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFVIYRG*LLMLLE
Trigger: CTCCAACAGCATCAGCAGGCAGCCTCGATAGATGAC...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTCAGAGCTGGGAGCCTaGAGCAAGCTCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFSELGA*SKLCWW
Trigger: CCACCAGCAGAGCTTGCTGCAGGCTCCCAGCTCTGA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGGCTTTTCCCCGGTGTaGGACCGCACATGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFGFSPV*DRTCCF
Trigger: GAAGCAGCATGTGCGGTCGCACACCGGGGAAAAGCC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTCCTGCAGCTCCGCCTaGTTGTCCCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFSCSSA*LSLSSL
Trigger: CAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCACTGGCAGGGACCGTaGTGTCCGATGTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFHWQGP*CPMSGE
Trigger: CTCTCCAGACATCGGACAGCACGGTCCCTGCCAGTG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTTCATGTTGCTCTTCTaGGTGAAGCCCATGACGCAG +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGFMLLF*VKPMTQ
Trigger: CTGCGTCATGGGCTTCACGCAGAAGAGCAACATGAA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGCCGTTGCTTGCTCCTTaGAGACGGTTCTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLPLLAP*RRFCGF
Trigger: GAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGG...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATAGGGCCACCGTTGCTTaGTCCTTGCAGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYRATVA*SLQTVL
Trigger: CAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTATCCATATAAAGAACTaGCCCGATGCCTGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLIHIKN*PDACVG
Trigger: CCCTACACAGGCATCGGGGCAGTTCTTTATATGGAT...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTCAACATTAAATGTTTaGGGGCACTGGTCACATCGA +
Preference number: 4 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVSTLNV*GHWSHR
Trigger: TCGATGTGACCAGTGCCCCCAAACATTTAATGTTGA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTACTTGCTCTGCGTCTGTaGGGTCCGTCTGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVLALRL*GPSAHL
Trigger: CAAATGAGCAGACGGACCCCACAGACGCAGAGCAAG...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCTCTTCATGCAGTACTaGCACTTGAACGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLLFMQY*HLNALM
Trigger: CATCAAGGCGTTCAAGTGCCAGTACTGCATGAAGAG...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGGTTTTTCACCTGTATaGGATCTGATGTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAGFSPV*DLMCCL
Trigger: TAAACAACACATCAGATCCCATACAGGTGAAAAACC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGCAAGCTCATATCTGTaGGTTTTCATGTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAASSYL*VFMCFL
Trigger: CAAAAAGCACATGAAAACCCACAGATATGAGCTTGC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGAGCAAGCTCATATCTGTaGGTTTTCATGTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRASSYL*VFMCFL
Trigger: CAAAAAGCACATGAAAACCCACAGATATGAGCTTGC...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGGCTTTTCTCCAGTATaGATTCGAACATGCCTCACC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGGFSPV*IRTCLT
Trigger: GGTGAGGCATGTTCGAATCCATACTGGAGAAAAGCC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTAATCCGTGAGGAGCGCTaGGAACTGCTGACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLIREER*ELLTLR
Trigger: TCTCAGGGTCAGCAGTTCCCAGCGCTCCTCACGGAT...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGTATGTATGCGGCTGTaGCGCTCCAGCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGVCMRL*RSSWLG
Trigger: ACCAAGCCAGCTGGAGCGCCACAGCCGCATACATAC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCTGAATCCTTATTGGTaGGTCAGGTTTACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYLNPYW*VRFTRV
Trigger: GACTCGAGTAAACCTGACCCACCAATAAGGATTCAG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGTGCTCATCCGTGCATaGGGGTCTGAGGAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGVLIRA*GSEEGN
Trigger: ATTCCCCTCCTCAGACCCCCATGCACGGATGAGCAC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTTTCACCTGTGTGCTTaGTCATGTGGGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLFHLCA*SCGSAV
Trigger: CACTGCAGACCCACATGATCAAGCACACAGGTGAAA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCTCTGTAGAACTTGTTaGATTCTGTGGCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGLCRTC*ILWPTH
Trigger: ATGGGTGGGCCACAGAATTCAACAAGTTCTACAGAG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGACCTAAGTCAGTTATaGGGATTGGTTCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLDLSQL*GLVPAK
Trigger: CTTTGCAGGAACCAATCCTCATAACTGACTTAGGTC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATGCAGACGTGACAGCTaGAGAGCTTCTGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVCRRDS*RASDLC
Trigger: ACACAGGTCAGAAGCTCTTCAGCTGTCACGTCTGCA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLRHRCC*RKASAC
Trigger: ACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCTTTCTTGCAGGCCTTaGAGGCATGCTGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFLSCRP*RHAAGF
Trigger: GAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGTGTGCGTCTTGATGTaGGCTGTCAGCGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYVCVLM*AVSVLF
Trigger: GAAGAGCACGCTGACAGCGCACATCAAGACGCACAC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGCCAACACGGACCTTTaGAGGTTTACGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGANTDL*RFTLVP
Trigger: AGGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATGGGAACCTTGTGCCTaGAGGTCCAGTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRWEPCA*RSSSSW
Trigger: CCAAGAGGAACTGGACCTGCAGGCACAAGGTTCCCA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGATGGTGTCTCTTCATGTaGTTTTTACAATGCACTGTA +
Preference number: 4 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRWCLFM*FLQCTV
Trigger: TACAGTGCATTGTAAAAAGCACATGAAGAGACACCA...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTCTTGGGGCAGTATGTaGAGCAGTTGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGSWGSM*SSWRAW
Trigger: CCAAGCACGCCAACTGCTGCACATACTGCCCCAAGA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGCGTCTGCTGCAGAATaGTTGGATCAATCTGCAACG +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWASAAE*LDQSAT
Trigger: CGTTGCAGATTGATCCAAGCATTCTGCAGCAGACGC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGTCAGCACTGAATCCTaGTCAGACAGCGGGCCTATG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYVSTES*SDSGPM
Trigger: CATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGAC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAAAATACATCTGTTTATaGACGAAGAGAAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: LADGSVVSYLRCMACASAKYICL*TKRKSW
Trigger: CCATGACTTTCTCTTCGTGCATAAACAGATGTATTT...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCTCACTTACTTCCTATaGAGTAGGTCTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYLTYFL*SRSWKR
Trigger: CCTTTTCCAAGACCTACTGCATAGGAAGTAAGTGAG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTTCTTGACCTCTGAGTaGACTCGCTGCACGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYFLTSE*TRCTCD
Trigger: GTCGCACGTGCAGCGAGTCCACTCAGAGGTCAAGAA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATGGGTTTTGAGCGTGTaGTGCAGAGGTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVWVLSV*CRGLGM
Trigger: CATGCCAAGACCTCTGCACCACACGCTCAAAACCCA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACTTGCTCTGCGTCTGTaGGGTCCGTCTGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRLALRL*GPSAHL
Trigger: CAAATGAGCAGACGGACCCCACAGACGCAGAGCAAG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATAGGAATATCAGGGACTaGAATATTCGTCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYRNIRD*NIRLAN
Trigger: GTTGGCAAGACGAATATTCCAGTCCCTGATATTCCT...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTAGCAAGCTCTGCTGGTaGAAGCTTGTGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFSKLCW*KLVERA
Trigger: GGCCCTCTCCACAAGCTTCCACCAGCAGAGCTTGCT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGCGCTCCAGCTGGCTTaGTTTGGCAAATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYALQLA*FGKCLL
Trigger: GAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGAGCACGGGTGGGATTTaGTTTGGGACATGTTTTATG +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLSTGGI*FGTCFM
Trigger: CATAAAACATGTCCCAAACCAAATCCCACCCGTGCT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAAGAACCTTCCATCTTTaGAATGCTGTAGGAATGGCG +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGRTFHL*NAVGMA
Trigger: CGCCATTCCTACAGCATTCCAAAGATGGAAGGTTCT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGAATATGTGGGCATCTaGCCCACGAAAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWEYVGI*PTKSSV
Trigger: CACAGAGCTTTTCGTGGGCCAGATGCCCACATATTC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGTTAAGTTTTGTCGCTaGAGTTCTCCAAATACAATG +
Preference number: 4 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAVKFCR*SSPNTM
Trigger: CATTGTATTTGGAGAACTCCAGCGACAAAACTTAAC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
3UTR CAA 72 bp GGAACTTTCAAAAGGTTCCTCAATGACTGGGTGCCGTaGAATAAAGCAGCAAATGAAAGGGAACAGGAACAG +
Preference number: 4 (lower is better)
Translates to: GTFKRFLNDWVP*NKAANEREQEQ
Trigger: CTGTTCCTGTTCCCTTTCATTTGCTGCTTTATTCAACGGCACCCAGTCATTGAGGAACCTTTTGAAAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTGCGAAGTCATCACTTaGGTGAGGTCTTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYCEVIT*VRSWVP
Trigger: TGGGACCCAAGACCTCACTCAAGTGATGACTTCGCA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGACATGACCAGGTTCTaGGTCGAGATGGCCGATGGA +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFDMTRF*VEMADG
Trigger: TCCATCGGCCATCTCGACTCAGAACCTGGTCATGTC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGAACAGGAACAGTTCTaGCACATGCACAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGEQEQF*HMHRAL
Trigger: CAGTGCCCTGTGCATGTGTCAGAACTGTTCCTGTTC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTGCTTCATGGTTACTTaGGCACACAAGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGCFMVT*AHKQDQ
Trigger: TTGATCCTGCTTGTGTGCTCAAGTAACCATGAAGCA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTCATGTAGCATAATATaGGCTTTGAGACTAGCCACT +
Preference number: 4 (lower is better)
Translates to: CSWGGETDALSAIRTSTYSCSII*ALRLAT
Trigger: AGTGGCTAGTCTCAAAGCGCATATTATGCTACATGA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCAACGTCTTTCCACAGTaGGGACACGAATACGTGAAT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGNVFPQ*GHEYVN
Trigger: ATTCACGTATTCGTGTCCGCACTGTGGAAAGACGTT...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGCATGTGGGTCTGCAGTaGCCCCTTCTGGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGHVGLQ*PLLVKS
Trigger: GCTTTTAACCAGAAGGGGGCACTGCAGACCCACATG...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCTGTGGGGTCCGTCTaGTCATTTGAAACGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVSVGSV*SFETLE
Trigger: TTCCAGCGTTTCAAATGAGCAGACGGACCCCACAGA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCCTGTTCTTTTTCTTaGTCTGCGTCTGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVSCSFS*SASVGS
Trigger: GGACCCCACAGACGCAGAGCAAGAAAAAGAACAGGA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGTCATCTATCGAGGCTaGCTGCTGATGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYVIYRG*LLMLLE
Trigger: CTCCAACAGCATCAGCAGGCAGCCTCGATAGATGAC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTGGGAACCTTGTGCCTaGAGGTCCAGTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFWEPCA*RSSSSW
Trigger: CCAAGAGGAACTGGACCTGCAGGCACAAGGTTCCCA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGAAACTGGGAACCTTGTaGCTGCAGGTCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGKLGTL*LQVQFL
Trigger: GAGGAACTGGACCTGCAGGCACAAGGTTCCCAGTTT...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTGCTGTAGCGTCTGCTaGAGAATGCTTGGATCAATC +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLCCSVC*RMLGSI
Trigger: GATTGATCCAAGCATTCTGCAGCAGACGCTACAGCA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATATGGCTTGTGCTTCTaGAATTATGTAACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGYGLCF*NYVTLD
Trigger: GTCCAGGGTTACATAATTGCAGAAGCACAAGCCATA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGCTGTCGCGGAGCCATaGCCTGATTTTGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYAVAEP*PDFESL
Trigger: CAGACTTTCAAAATCAGGGCATGGCTCCGCGACAGC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTATGCTTCCTCAGTACCTaGACCCCACCTTCACGTTTG +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLCFLST*TPPSRL
Trigger: CAAACGTGAAGGTGGGGTGCAGGTACTGAGGAAGCA...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATATGCTACATGCCTCCTaGTTCCTCAGTACCTGCACC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYMLHAS*FLSTCT
Trigger: GGTGCAGGTACTGAGGAAGCAGGAGGCATGTAGCAT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTGCTGTAAAATGTCCTaGTTGATGCCCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGCCKMS*LMPTVM
Trigger: CATCACAGTGGGCATCAACCAGGACATTTTACAGCA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTTTGCAGGTTTACGCTaGTGCCTCATTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYFAGLR*CLIFLN
Trigger: ATTAAGGAAAATGAGGCACCAGCGTAAACCTGCAAA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAAGGAATATCAGGGACTaGAATATTCGTCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGRNIRD*NIRLAN
Trigger: GTTGGCAAGACGAATATTCCAGTCCCTGATATTCCT...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATGTCAGTTATGAGGATTaGTTCCTGCAAAGGAATATC +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYVSYED*FLQRNI
Trigger: GATATTCCTTTGCAGGAACCAATCCTCATAACTGAC...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATGCTGTTGGAGCTGCTaGGCAAGCTCATATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRCCWSC*ASSYLW
Trigger: CCACAGATATGAGCTTGCCCAGCAGCTCCAACAGCA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGAGACTCAAGTGTGCTaGAATCCTGTAGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWETQVC*NPVAVG
Trigger: TCCAACAGCTACAGGATTCCAGCACACTTGAGTCTC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACAGGGTAATTTCCTGTaGAGACCCCGAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRQGNFL*RPRGRR
Trigger: ACGTCTTCCTCGGGGTCTCCACAGGAAATTACCCTG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTACAGGGTAATTTCCTGTaGAGACCCCGAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLQGNFL*RPRGRR
Trigger: ACGTCTTCCTCGGGGTCTCCACAGGAAATTACCCTG...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGCTGACTGTGGCGTGTaGCTCACTAGTATGACTTGC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYADCGV*LTSMTC
Trigger: GCAAGTCATACTAGTGAGCCACACGCCACAGTCAGC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTGCAGCGCACTCTTCTaGTTGAAGGCTTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLCSALF*LKAFSQ
Trigger: TTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTGCA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCCTACCTGCGATGTATaGCTTGTGCTTCTGCAATTA +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGPTCDV*LVLLQL
Trigger: TAATTGCAGAAGCACAAGCCATACATCGCAGGTAGG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTTATCCTCAAAACCCTaGTTATACATGAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYLSSKP*LYMRPR
Trigger: TCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCAGCTTCAGTGCTTCATaGTTACTTGAGCACACAAGC +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGSFSAS*LLEHTS
Trigger: GCTTGTGTGCTCAAGTAACCATGAAGCACTGAAGCT...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTCTGCTAGGAATATGTaGGCATCTGGCCCACGAAAA +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLSARNM*ASGPRK
Trigger: TTTTCGTGGGCCAGATGCCCACATATTCCTAGCAGA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGTTAAAGCCAGCACGGTaGCTTTTGGCATCACTATCC +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLLKPAR*LLASLS
Trigger: GGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATGCTGCAGCTGGAATTaGAGACAGCCCACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRCCSWN*RQPTVF
Trigger: GAAAACAGTGGGCTGTCTTCAATTCCAGCTGCAGCA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGAAACATCTGGGTTTTaGGCGTGTGGTGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFETSGF*ACGAEV
Trigger: GACCTCTGCACCACACGCTCAAAACCCAGATGTTTC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGGACCTAAGTCAGTTATaGGGATTGGTTCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLDLSQL*GLVPAK
Trigger: CTTTGCAGGAACCAATCCTCATAACTGACTTAGGTC...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGCAGTTAATTGCTTCGTaGACTAGACACACTAGCCAC +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWQLIAS*TRHTSH
Trigger: GTGGCTAGTGTGTCTAGTTCACGAAGCAATTAACTG...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAAATACAATACTGATCTaGAGTGCTCGTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVNTILI*SARGEV
Trigger: CACCTCCCCACGAGCACTTCAGATCAGTATTGTATT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTCATGTAGCATAATATaGGCTTTGAGACTAGCCACT +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLSCSII*ALRLAT
Trigger: AGTGGCTAGTCTCAAAGCGCATATTATGCTACATGA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGTTTTGAGCGTGTGGTaGAGAGGTCTTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFVLSVW*RGLGMA
Trigger: TGCCATGCCAAGACCTCTGCACCACACGCTCAAAAC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTCCTGTTCTTTTTCTTaGTCTGCGTCTGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGSCSFS*SASVGS
Trigger: GGACCCCACAGACGCAGAGCAAGAAAAAGAACAGGA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTACTGGAATATTCGTCTTaGCAACACGGACCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVLEYSS*QHGPLQ
Trigger: CTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAG...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGCGTCTGCTGCAGAATaGTTGGATCAATCTGCAACG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYASAAE*LDQSAT
Trigger: CGTTGCAGATTGATCCAAGCATTCTGCAGCAGACGC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCCCTGCTGTAGCGTCTaGTGCAGAATGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFPCCSV*CRMLGS
Trigger: TGATCCAAGCATTCTGCAGCAGACGCTACAGCAGGG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTATGGCTTGTGCTTCTaGAATTATGTAACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGYGLCF*NYVTLD
Trigger: GTCCAGGGTTACATAATTGCAGAAGCACAAGCCATA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGAAAATCTCTTCTGACTaGCTGTTGCTCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: LKPARWLLASLSISNTKLKISSD*LLLLPF
Trigger: GAATGGCAGGAGCAACAGGCAGTCAGAAGAGATTTT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTGCTGTAAAATGTCCTaGTTGATGCCCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWCCKMS*LMPTVM
Trigger: CATCACAGTGGGCATCAACCAGGACATTTTACAGCA...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGCAGAGGTCTTGGCATaGCAGGAGTCATTAGGATGT +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGAEVLA*QESLGC
Trigger: ACATCCTAATGACTCCTGCCATGCCAAGACCTCTGC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAGCAGAGGTCTTGGCATaGCAGGAGTCATTAGGATGT +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRAEVLA*QESLGC
Trigger: ACATCCTAATGACTCCTGCCATGCCAAGACCTCTGC...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAAACGCTGGAAACATCTaGGTTTTGAGCGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRNAGNI*VLSVWC
Trigger: GCACCACACGCTCAAAACCCAGATGTTTCCAGCGTT...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTTTGCAGGTTTACGCTaGTGCCTCATTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLFAGLR*CLIFLN
Trigger: ATTAAGGAAAATGAGGCACCAGCGTAAACCTGCAAA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTTGTCCTCCAGAAACTaGGAACCTTGTGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFLSSRN*EPCACR
Trigger: CCTGCAGGCACAAGGTTCCCAGTTTCTGGAGGACAA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATGCAGCGCACTCTTCTaGTTGAAGGCTTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVCSALF*LKAFSQ
Trigger: TTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTGCA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGCTGAATCCTTATTGGTaGGTCAGGTTTACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWLNPYW*VRFTRV
Trigger: GACTCGAGTAAACCTGACCCACCAATAAGGATTCAG...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTGTCGCCAGCCCGTGTaGACAGCTGAATCCTTATTG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFCRQPV*TAESLL
Trigger: CAATAAGGATTCAGCTGTCCACACGGGCTGGCGACA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGATCTGAAGTGCTCGTaGGGAGGTGAAACTGACGCT +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFDLKCS*GGETDA
Trigger: AGCGTCAGTTTCACCTCCCCACGAGCACTTCAGATC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCCTGTGGGTGCATTTATaGAGTGTCAGGTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFLWVHL*SVRLNS
Trigger: TGAATTCAACCTGACACTTCATAAATGCACCCACAG...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATACATATCAGACACTTaGAAGATTTCAGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGYISDT*KISVLC
Trigger: ACACAGGACTGAAATCTTTCAAGTGTCTGATATGTA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCTGCATCTTGCTGATATaGGTGTTTAAGCTGCCTAAA +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGCILLI*VFKLPK
Trigger: TTTAGGCAGCTTAAACACGCATATCAGCAAGATGCA...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTTCCTGTTCTTTTTCTTaGTCTGCGTCTGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFSCSFS*SASVGS
Trigger: GGACCCCACAGACGCAGAGCAAGAAAAAGAACAGGA...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTTGGTGTCTCTTCATGTaGTTTTTACAATGCACTGTA +
Preference number: 4 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSWCLFM*FLQCTV
Trigger: TACAGTGCATTGTAAAAAGCACATGAAGAGACACCA...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR GCA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGACAAAAGAGAACAATaGGGTGACACTTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGDKREQ*GDTFPS
Trigger: ACTAGGAAAAGTGTCACCGCATTGTTCTCTTTTGTC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTAACGCTGGAAACATCTaGGTTTTGAGCGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFNAGNI*VLSVWC
Trigger: GCACCACACGCTCAAAACCCAGATGTTTCCAGCGTT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGCTCATTTGAAACGCTaGAAACATCTGGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWAHLKR*KHLGFE
Trigger: CTCAAAACCCAGATGTTTCCAGCGTTTCAAATGAGC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGCTCTTCATGCAGTACTaGCACTTGAACGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGLFMQY*HLNALM
Trigger: CATCAAGGCGTTCAAGTGCCAGTACTGCATGAAGAG...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTGTCATGGAGAGAATTaGTCCAGCCATCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYCHGEN*SSHLSR
Trigger: CCTTGAGAGATGGCTGGACCAATTCTCTCCATGACA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTATTGCAGACGGTTCTGTaGTTTCCTACCTGCGATGTA +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLLQTVL*FPTCDV
Trigger: TACATCGCAGGTAGGAAACCACAGAACCGTCTGCAA...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTGCAGACGGTTCTGTaGTTTCCTACCTGCGATGTA +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGLQTVL*FPTCDV
Trigger: TACATCGCAGGTAGGAAACCACAGAACCGTCTGCAA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTCTTGGGATGACTCCTaGATCAAGCGAGTTGTTACA +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYSWDDS*IKRVVT
Trigger: TGTAACAACTCGCTTGATTCAGGAGTCATCCCAAGA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTAGGACGAGACTTCCGTaGTGCATTTCTGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFRTRLP*CISVRM
Trigger: CATTCTGACAGAAATGCATCACGGAAGTCTCGTCCT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTACTGATTTTGAAAGTCTaGAGCCTTTCCAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLLILKV*SLSSGH
Trigger: GTGTCCACTGGAAAGGCTTCAGACTTTCAAAATCAG...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGCAGGTTTACGCTGGTaGCTCATTTTCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYAGLRW*LIFLNS
Trigger: GGAATTAAGGAAAATGAGGCACCAGCGTAAACCTGC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTAAATACTGATCTGAAGTaGTCGTGGGGAGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLNTDLK*SWGGET
Trigger: AGTTTCACCTCCCCACGAGCACTTCAGATCAGTATT...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCAGTTATTCTGCATATaGGGCTACAGCCAGGTTTAC +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYQLFCI*GYSQVY
Trigger: GTAAACCTGGCTGTAGCCGCATATGCAGAATAACTG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGCAGTTATTCTGCATATaGGGCTACAGCCAGGTTTAC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGQLFCI*GYSQVY
Trigger: GTAAACCTGGCTGTAGCCGCATATGCAGAATAACTG...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACACGACAAGAATTCCTaGTTTGGTGTGGCCTATGAA +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRHDKNS*FGVAYE
Trigger: TTCATAGGCCACACCAAACCAGGAATTCTTGTCGTG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAACATTAAATGTTTaGGGGCACTGGTCACATCGA +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVSTLNV*GHWSHR
Trigger: TCGATGTGACCAGTGCCCCCAAACATTTAATGTTGA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
3UTR CAA 72 bp CAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTACTaGAGCACACAAGCAGGATCAAAACACTTAGGAACT +
Preference number: 4 (lower is better)
Translates to: QFILSASVLHGY*STQAGSKHLGT
Trigger: AGTTCCTAAGTGTTTTGATCCTGCTTGTGTGCTCAAGTAACCATGAAGCACTGAAGCTGAAAGAATGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCTACATATCAGACACTTaGAAGATTTCAGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFYISDT*KISVLC
Trigger: ACACAGGACTGAAATCTTTCAAGTGTCTGATATGTA...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAAACCCTGGTTATACATaGGGCCTAGAAATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVNPGYT*GLEISF
Trigger: AAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATAACGGAGATTCCAAGTaGTTTGCTCTTCACAAAACG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYNGDSK*FALHKT
Trigger: CGTTTTGTGAAGAGCAAAGCACTTGGAATCTCCGTT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGACAAAAGAGAACAATaGGGTGACACTTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVDKREQ*GDTFPS
Trigger: ACTAGGAAAAGTGTCACCGCATTGTTCTCTTTTGTC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGCGATGTATGGCTTGTaGTTCTGCAATTATGTAACC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGAMYGL*FCNYVT
Trigger: GGTTACATAATTGCAGAAGCACAAGCCATACATCGC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGTTAGCGATGTATGGCTTGTaGTTCTGCAATTATGTAACC +
Preference number: 4 (lower is better)
Translates to: FGIFAKAIHSFSFSASWLAMYGL*FCNYVT
Trigger: GGTTACATAATTGCAGAAGCACAAGCCATACATCGC...TAACCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTAATACTGATCTGAAGTaGTCGTGGGGAGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFNTDLK*SWGGET
Trigger: AGTTTCACCTCCCCACGAGCACTTCAGATCAGTATT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGCAATTACAGTTATTCTaGATATGCGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGQLQLF*ICGYSQ
Trigger: CTGGCTGTAGCCGCATATGCAGAATAACTGTAATTG...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCATGATAAACACGTTTaGGTCAGTAGAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYHDKHV*VSRGGV
Trigger: AACTCCTCCTCTACTGACCCAAACGTGTTTATCATG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGACGAAGAGAAAGTCATaGGGTTTTTACGGATTCGTG +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGTKRKS*GFYGFV
Trigger: CACGAATCCGTAAAAACCCCATGACTTTCTCTTCGT...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCTATGCAGTAGGTCTTaGAAAAGGGATACATTCGCA +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYLCSRS*KRDTFA
Trigger: TGCGAATGTATCCCTTTTCCAAGACCTACTGCATAG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR TCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATAACCCTGGTTATACATaGGGCCTAGAAATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYNPGYT*GLEISF
Trigger: AAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTCATGTAGCATAATATaGGCTTTGAGACTAGCCACT +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYSCSII*ALRLAT
Trigger: AGTGGCTAGTCTCAAAGCGCATATTATGCTACATGA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATGCATCTTGCTGATATaGGTGTTTAAGCTGCCTAAA +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRCILLI*VFKLPK
Trigger: TTTAGGCAGCTTAAACACGCATATCAGCAAGATGCA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATCTGTTTTCTAAGGCTTaGTGTAAAATGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYLFSKA*CKMSWL
Trigger: CAACCAGGACATTTTACAGCAAGCCTTAGAAAACAG...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGCTGTTTTCTAAGGCTTaGTGTAAAATGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGLFSKA*CKMSWL
Trigger: CAACCAGGACATTTTACAGCAAGCCTTAGAAAACAG...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTATGAGGATTGGTTCCTaGAAAGGAATATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFMRIGS*KGISGT
Trigger: AGTCCCTGATATTCCTTTGCAGGAACCAATCCTCAT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATACTTATAAGGCTTCATaGTCATATGTGTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYTYKAS*SYVWPC
Trigger: ACATGGCCACACATATGAGCATGAAGCCTTATAAGT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTAACGGAGATTCCAAGTaGTTTGCTCTTCACAAAACG +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFNGDSK*FALHKT
Trigger: CGTTTTGTGAAGAGCAAAGCACTTGGAATCTCCGTT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTAGGAATATCAGGGACTaGAATATTCGTCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFRNIRD*NIRLAN
Trigger: GTTGGCAAGACGAATATTCCAGTCCCTGATATTCCT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGTCAGTTATGAGGATTaGTTCCTGCAAAGGAATATC +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGVSYED*FLQRNI
Trigger: GATATTCCTTTGCAGGAACCAATCCTCATAACTGAC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGGTTTTTCACCTGTATaGGATCTGATGTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVGFSPV*DLMCCL
Trigger: TAAACAACACATCAGATCCCATACAGGTGAAAAACC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATGGCCTTCTTTGGGTCTaGTTTATAATGAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYGLLWV*FIMKLH
Trigger: ATGCAGTTTCATTATAAACCAGACCCAAAGAAGGCC...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAACATTTAAACACTCTTaGCTTCTGGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRTFKHS*LLGAQR
Trigger: TCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGT...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CCA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTTATCCTCAAAACCCTaGTTATACATGAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: SWRELVQPSLKVSVILTYLSSKP*LYMRPR
Trigger: TCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR TCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTACATATCAGACACTTaGAAGATTTCAGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGYISDT*KISVLC
Trigger: ACACAGGACTGAAATCTTTCAAGTGTCTGATATGTA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR GCA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTGGTGTCTCTTCATGTaGTTTTTACAATGCACTGTA +
Preference number: 4 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGWCLFM*FLQCTV
Trigger: TACAGTGCATTGTAAAAAGCACATGAAGAGACACCA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 90 bp CTGCCCAGGCTGCGGGGACTGCCCCGACTCCACCGGCGCCGGCTCTaGGAGCTCCAGGAGCTGCTGGATGACGTCGCTCACCGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LPRLRGLPRLHRRRL*ELQELLDDVAHRLG
Trigger: TCCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTCAGAGCCGGCGCCGGTGGAGTCGGGGCAGTCCCCGCAGCCTGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS TCA 90 bp CCGACTCCACCGGCGCCGGCTCTGAGAGCTCCAGGAGCTGCTGGATaGCGTCGCTCACCGCCTGGGAGCTCGGCTGGCTTGAGGCCGACG +
Preference number: 5 (lower is better)
Translates to: PTPPAPALRAPGAAG*RRSPPGSSAGLRPT
Trigger: CGTCGGCCTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTCAGAGCCGGCGCCGGTGGAGTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS GCA 90 bp GACTGCCCCGACTCCACCGGCGCCGGCTCTGAGAGCTCCAGGAGCTaGTGGATGACGTCGCTCACCGCCTGGGAGCTCGGCTGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: DCPDSTGAGSESSRS*WMTSLTAWELGWLE
Trigger: CTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTCAGAGCCGGCGCCGGTGGAGTCGGGGCAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS GCA 90 bp CACCACATGCTGAGGCTCCAGGTCCAGCATGGCCTCGGGGTTCGCTaGGACCACCTCTGCCGTCTGCGGCAGCTCGTCGCTCTCGATCTC +
Preference number: 5 (lower is better)
Translates to: HHMLRLQVQHGLGVR*DHLCRLRQLVALDL
Trigger: GAGATCGAGAGCGACGAGCTGCCGCAGACGGCAGAGGTGGTCGCAGCGAACCCCGAGGCCATGCTGGACCTGGAGCCTCAGCATGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCTCTGCTGGTGGAAGCTaGTGGAGAGGGCCTGAGACT +
Preference number: 5 (lower is better)
Translates to: RHWCARPSFSGWLPGARFSAGGS*WRGPET
Trigger: AGTCTCAGGCCCTCTCCACAAGCTTCCACCAGCAGA...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS GCA 90 bp TGCTTGTCCCTCAGCTCACTGATGCGGTCCTTTTCTGCCGCGGACTaGACCAGGACCTTCTCTGACACCGTGGCGCTCTCCTGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: CLSLSSLMRSFSAAD*TRTFSDTVALSCGR
Trigger: CCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAAGGTCCTGGTGCAGTCCGCGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCGGTTTCTTGAAGCTCTaGGGGCAGTATGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RHWCARPSFSGWLPGARFGFLKL*GQYVQQ
Trigger: CTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACC...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS TCA 90 bp GCTTGGGCTCGTCCTGCAGCTCCGCCTGCTTGTCCCTCAGCTCACTaGTGCGGTCCTTTTCTGCCGCGGACTGCACCAGGACCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: AWARPAAPPACPSAH*CGPFLPRTAPGPSL
Trigger: CAGAGAAGGTCCTGGTGCAGTCCGCGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp TCCGAGGAGGTCTCGAACTCTTTCTTGCAGGCCTTGCAGGCATGCTaGCGGGTTCCAGCCAGCTCCTGGCGGTGCTCCTCCATGTGCACG +
Preference number: 5 (lower is better)
Translates to: SEEVSNSFLQALQAC*RVPASSWRCSSMCT
Trigger: CGTGCACATGGAGGAGCACCGCCAGGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGACCTCCTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS GCA 90 bp AGCTCCGAGGAGGTCTCGAACTCTTTCTTGCAGGCCTTGCAGGCATaGTGCCGGGTTCCAGCCAGCTCCTGGCGGTGCTCCTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: SSEEVSNSFLQALQA*CRVPASSWRCSSMC
Trigger: GCACATGGAGGAGCACCGCCAGGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGACCTCCTCGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS GCA 90 bp GTTCCTTCAGCTCCGAGGAGGTCTCGAACTCTTTCTTGCAGGCCTTaGAGGCATGCTGCCGGGTTCCAGCCAGCTCCTGGCGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: VPSAPRRSRTLSCRP*RHAAGFQPAPGGAP
Trigger: AGGAGCACCGCCAGGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGACCTCCTCGGAGCTGAAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS GCA 90 bp TATGTGCAGCAGTTGGCGTGCTTGGGCTCGTCCTGCAGCTCCGCCTaGTTGTCCCTCAGCTCACTGATGCGGTCCTTTTCTGCCGCGGAC +
Preference number: 5 (lower is better)
Translates to: YVQQLACLGSSCSSA*LSLSSLMRSFSAAD
Trigger: GTCCGCGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGGGAGCTCGGCTGGCTaGAGGCCGACGTGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVGSSAG*RPTWLG
Trigger: CCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCCC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGCAGCAGTTGGCGTGCTaGGGCTCGTCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAQQLAC*GSSCSS
Trigger: GGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTG...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CACGCCCGACGAGGACATGACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATTCCTTCTCTGGCTGGTaGCCCGGGGCCAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: HARRGHDQVLSRDGRWRHSFSGW*PGARFP
Trigger: TGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGGA...ATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAAGGTGCGTGGCGCGCTaGAAGGCCTTCCTGCACACG +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLRCVAR*KAFLHT
Trigger: CGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACCT...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp CAGTACTGGCACTTGAACGCCTTGATGCCGGTGTGCGTCTTGATGTaGGCTGTCAGCGTGCTCTTCACGGCGAAGGCGCGGAAGCACTGC +
Preference number: 5 (lower is better)
Translates to: QYWHLNALMPVCVLM*AVSVLFTAKARKHC
Trigger: GCAGTGCTTCCGCGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCAGTACTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS GCA 90 bp CCTTGGGGTAGCCCTGCTGGTTCGAAGGACTGTTGCGCAGGGCTCTaGTCTTCAAACTGGTCTACGTGCCCTCGCAGAGGGTCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: PWGSPAGSKDCCAGL*SSNWSTCPRRGSCG
Trigger: TCCACAGGACCCTCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACCAGCAGGGCTACCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp CTCTTGGGGCAGTATGTGCAGCAGTTGGCGTGCTTGGGCTCGTCCTaGAGCTCCGCCTGCTTGTCCCTCAGCTCACTGATGCGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: LLGQYVQQLACLGSS*SSACLSLSSLMRSF
Trigger: AAAGGACCGCATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGGAGCTCGGCTGGCTaGAGGCCGACGTGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYGSSAG*RPTWLG
Trigger: CCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCCC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTACCAGGTCGCTGGGCTaGCGGAACTCCTTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LECCRNGVHALCPARVGFTRSLG*RNSLAQ
Trigger: CTGCGCCAAGGAGTTCCGCAAGCCCAGCGACCTGGT...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 90 bp CAGAGGTCACTGTGGGCTGTAAGGACAGGCCTGAGATGGGCTGGATaGCAACACTGGCAGGGACCGTGCTGTCCGATGTCTGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QRSLWAVRTGLRWAG*QHWQGPCCPMSGES
Trigger: GCTCTCTCCAGACATCGGACAGCACGGTCCCTGCCAGTGTTGTCATCCAGCCCATCTCAGGCCTGTCCTTACAGCCCACAGTGACCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 90 bp GGCCCAGCCCTGAGGCCATACCTGTGTGCAGGCGAATGTGCACCTTaGGGCTGCCAGAGGTGGAGAAGCTCTTCATGCAGTACTGGCACT +
Preference number: 5 (lower is better)
Translates to: GPALRPYLCAGECAP*GCQRWRSSSCSTGT
Trigger: AGTGCCAGTACTGCATGAAGAGCTTCTCCACCTCTGGCAGCCTCAAGGTGCACATTCGCCTGCACACAGGTATGGCCTCAGGGCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583488.1
CDS-3UTR CAA 90 bp GAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGCGCTGGGAACAGCATAATATGCGCTTaGAGACTAGCCACTCTGGAG +
Preference number: 5 (lower is better)
Translates to: EPAPPWPEREGSVRSAGNSIICA*RLATLE
Trigger: CTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCT...GTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGGTCTCGAACTCTTTCTaGCAGGCCTTGCAGGCATGC +
Preference number: 5 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLVSNSF*QALQAC
Trigger: GCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGAC...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGGGTCCGTCTGCTCATTaGAAACGCTGGAAACATCTG +
Preference number: 5 (lower is better)
Translates to: GHCADAHGSLSRSHALILGPSAH*KRWKHL
Trigger: CAGATGTTTCCAGCGTTTCAAATGAGCAGACGGACC...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATACCAGGTCGCTGGGCTaGCGGAACTCCTTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYTRSLG*RNSLAQ
Trigger: CTGCGCCAAGGAGTTCCGCAAGCCCAGCGACCTGGT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGCCTGCTGATGCTGTaGGAGCTGCTGGGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLCLLML*ELLGKL
Trigger: GAGCTTGCCCAGCAGCTCCAACAGCATCAGCAGGCA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGCAGCTCCGCCTGCTaGTCCCTCAGCTCACTGATG +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLCSSAC*SLSSLM
Trigger: CATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCAGCAGTTGGCGTGCTaGGGCTCGTCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYQQLAC*GSSCSS
Trigger: GGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGTCCAGCTGGCTTGGTTaGGCAAATGCCTTCTCACAA +
Preference number: 5 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRSSWLG*ANAFSQ
Trigger: TTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGA...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp ATGACTTGCGGCGAGCCTGCTCCACCCTGGCCCGAGAGAGAGGGATCCGTGAGGAGATATGCTTCTTATTaGCTGGGGTGGACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: MTCGEPAPPWPEREGSVRRYASY*LGWTGP
Trigger: TGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCT...CCTCACGGATCCCTCTCTCTCGGGCCAGGGTGGAGCAGGCTCGCCGCAAGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGAGTCGCCGCGCGCCTaGCTCTCCCTGGGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAESPRA*LSLGFG
Trigger: CCCGAAGCCCAGGGAGAGCAAGGCGCGCGGCGACTC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS GCA 90 bp CTAGGTTTCTTGAAGCTCTTGGGGCAGTATGTGCAGCAGTTGGCGTaGTTGGGCTCGTCCTGCAGCTCCGCCTGCTTGTCCCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LGFLKLLGQYVQQLA*LGSSCSSACLSLSS
Trigger: TGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGCACTGTGCTGACGCCCACGGCTCGCTGTCGCGGAGCCATGCCCTGATTTTGAGCATAATATGCGCTTaGAGACTAGCCACTCTGGAG +
Preference number: 5 (lower is better)
Translates to: GHCADAHGSLSRSHALILSIICA*RLATLE
Trigger: CTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCT...CAAAATCAGGGCATGGCTCCGCGACAGCGAGCCGTGGGCGTCAGCACAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGATGCCGGTGTGCGTCTaGATGTGCGCTGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: CFLFAGVDRATVACSLQTMPVCV*MCAVSV
Trigger: CACGCTGACAGCGCACATCAAGACGCACACCGGCAT...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGGCACTTGAACGCCTaGATGCCGGTGTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLWHLNA*MPVCVL
Trigger: CAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGTGGCACTTGAACGCCTaGATGCCGGTGTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAWHLNA*MPVCVL
Trigger: CAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCA...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGCCAACACGGACCTTaGCAGGTTTACGCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLCQHGP*QVYAGA
Trigger: GGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGTCTGCATGTGCTCCTaGAGGTGCGTGGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMVCMCS*RCVARL
Trigger: CAAGCGCGCCACGCACCTCAAGGAGCACATGCAGAC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGGTCTGCATGTGCTCCTaGAGGTGCGTGGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPVCMCS*RCVARL
Trigger: CAAGCGCGCCACGCACCTCAAGGAGCACATGCAGAC...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS TCA 90 bp GTTCCAGCCAGCTCCTGGCGGTGCTCCTCCATGTGCACGGCCAGCTaGCTCTGCAGAGTAAACTCATCCCCACACTCAGAACAGATGAGA +
Preference number: 5 (lower is better)
Translates to: VPASSWRCSSMCTAS*LCRVNSSPHSEQMR
Trigger: TCTCATCTGTTCTGAGTGTGGGGATGAGTTTACTCTGCAGAGTCAGCTGGCCGTGCACATGGAGGAGCACCGCCAGGAGCTGGCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS TCA 90 bp GGAGCCTGCAGCAAGCTCTGCTGGTGGAAGCTTGTGGAGAGGGCCTaGGACTCAAGTGTGCTGGAATCCTGTAGCTGTTGGACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: GACSKLCWWKLVERA*DSSVLESCSCWTGG
Trigger: TCCACCTGTCCAACAGCTACAGGATTCCAGCACACTTGAGTCTCAGGCCCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp AAGCTCTTCATGCAGTACTGGCACTTGAACGCCTTGATGCCGGTGTaGGTCTTGATGTGCGCTGTCAGCGTGCTCTTCACGGCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: KLFMQYWHLNALMPV*VLMCAVSVLFTAKA
Trigger: CGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCATGAAGAGCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS GCA 90 bp GCTCGTCGCTCTCGATCTCCACCTGCATTTGAGTGGAGGCCTGCATaGTCTGCTGGTCTACAGTGCTGTCATCTATCGAGGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ARRSRSPPAFEWRPA*SAGLQCCHLSRLPA
Trigger: AGCAGGCAGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGCAGGCCTCCACTCAAATGCAGGTGGAGATCGAGAGCGACGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp GTGAGGTCTTGGGTCCCACTGCTGTTAGTGGTCAGCACTGAATCCTaGTCAGACAGCGGGCCTATGGTCAGGTTCGCAGAGGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: VRSWVPLLLVVSTES*SDSGPMVRFAEVTV
Trigger: CACAGTGACCTCTGCGAACCTGACCATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAACAGCAGTGGGACCCAAGACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATATGCCGGTGTGCGTCTaGATGTGCGCTGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYMPVCV*MCAVSV
Trigger: CACGCTGACAGCGCACATCAAGACGCACACCGGCAT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCGGGTGAGGCTGCCATaGGTGGTGAAGGAAGCATTG +
Preference number: 5 (lower is better)
Translates to: CFLFAGVDRATVACSLQTRVRLP*VVKEAL
Trigger: CAATGCTTCCTTCACCACCAATGGCAGCCTCACCCG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTCCTGCGGCCGGATCTaGGCTAACTGGGCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYSCGRI*ANWAVS
Trigger: GGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGGA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCAGTATGTGCAGCAGTaGGCGTGCTTGGGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVQYVQQ*ACLGSS
Trigger: GGACGAGCCCAAGCACGCCAACTGCTGCACATACTG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGGCACTGGTGCGCCCGGCCCTCCTTCTCTGGCTGGTTGCCCGGGGCCAGGTTCCCTGTTAGAACAGAGTaGTTCATGATAAACACGTTT +
Preference number: 5 (lower is better)
Translates to: RHWCARPSFSGWLPGARFPVRTE*FMINTF
Trigger: AAACGTGTTTATCATGAACAACTCTGTTCTAACAGG...GAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCGGGCGCACCAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCACTTGAGTGAGGTCTaGGGTCCCACTGCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: AGVDRATVACSLQTVLWFHLSEV*GPTAVS
Trigger: ACTAACAGCAGTGGGACCCAAGACCTCACTCAAGTG...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTGGCTCAGGCTGGAGTaGTTAATGGTCAGGGTGATC +
Preference number: 5 (lower is better)
Translates to: AGVDRATVACSLQTVLWFWLRLE*LMVRVI
Trigger: GATCACCCTGACCATTAACAACTCCAGCCTGAGCCA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACATGGAGACATCGGTGTaGTTGAAGGAAGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHMETSV*LKEGFR
Trigger: GCGGAAGCCTTCCTTCAACAACACCGATGTCTCCAT...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAAGGTGCGTGGCGCGCTaGAAGGCCTTCCTGCACACG +
Preference number: 5 (lower is better)
Translates to: LADGSVVSYLRCMACASARCVAR*KAFLHT
Trigger: CGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACCT...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGGCGCTCCAGCTGGCTaGGTTTGGCAAATGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CFLFAGVDRATVACSLQTGAPAG*VWQMPS
Trigger: AGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCAGGGCCACCGTTGCTaGCTCCTTGCAGACGGTTCT +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYQGHRC*LLADGS
Trigger: AGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGCGGGTGGGATTTGGTTaGGGACATGTTTTATGTGGC +
Preference number: 5 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLRVGFG*GHVLCG
Trigger: GCCACATAAAACATGTCCCAAACCAAATCCCACCCG...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS TCA 90 bp CACTTGAGTGAGGTCTTGGGTCCCACTGCTGTTAGTGGTCAGCACTaGATCCTGCTCAGACAGCGGGCCTATGGTCAGGTTCGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: HLSEVLGPTAVSGQH*ILLRQRAYGQVRRG
Trigger: ACCTCTGCGAACCTGACCATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAACAGCAGTGGGACCCAAGACCTCACTCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp GTGCAGCCAACATCTCTCCAGCAGCCCACAAAGGCCCATGAGGTGTaGGAAAGCTCGCTGAAACGCCTGTTGGTCACCAACGTTTCCGTA +
Preference number: 5 (lower is better)
Translates to: VQPTSLQQPTKAHEV*ESSLKRLLVTNVSV
Trigger: TACGGAAACGTTGGTGACCAACAGGCGTTTCAGCGAGCTTTCGCACACCTCATGGGCCTTTGTGGGCTGCTGGAGAGATGTTGGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS GCA 90 bp GGCCTGCATGCTCTGCTGGTCTACAGTGCTGTCATCTATCGAGGCTaGCTGCTGATGCTGTTGGAGCTGCTGGGCAAGCTCATATCTGTG +
Preference number: 5 (lower is better)
Translates to: GLHALLVYSAVIYRG*LLMLLELLGKLISV
Trigger: CACAGATATGAGCTTGCCCAGCAGCTCCAACAGCATCAGCAGGCAGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp CCACCTGCATTTGAGTGGAGGCCTGCATGCTCTGCTGGTCTACAGTaGTGTCATCTATCGAGGCTGCCTGCTGATGCTGTTGGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PPAFEWRPACSAGLQ*CHLSRLPADAVGAA
Trigger: AGCAGCTCCAACAGCATCAGCAGGCAGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGCAGGCCTCCACTCAAATGCAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp TCGAAGGACTGTTGCGCAGGGCTCTGCTCTTCAAACTGGTCTACGTaGCCTCGCAGAGGGTCCTGTGGAGCCACAAACCCATCTTCATCT +
Preference number: 5 (lower is better)
Translates to: SKDCCAGLCSSNWST*PRRGSCGATNPSSS
Trigger: AGATGAAGATGGGTTTGTGGCTCCACAGGACCCTCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp GTCACTGTAAAACCTTGGGGTAGCCCTGCTGGTTCGAAGGACTGTTaGGCAGGGCTCTGCTCTTCAAACTGGTCTACGTGCCCTCGCAGA +
Preference number: 5 (lower is better)
Translates to: VTVKPWGSPAGSKDC*AGLCSSNWSTCPRR
Trigger: TCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACCAGCAGGGCTACCCCAAGGTTTTACAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTATGTGGTGCAGAGGTCTaGGCATGGCAGGAGTCATTA +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLCGAEV*AWQESL
Trigger: TAATGACTCCTGCCATGCCAAGACCTCTGCACCACA...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGGAAACATCTGGGTTTaGAGCGTGTGGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLGNIWV*SVWCRG
Trigger: ACCTCTGCACCACACGCTCAAAACCCAGATGTTTCC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTTCCTGTTCTTTTTCTaGCTCTGCGTCTGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: AGVDRATVACSLQTVLWFFLFFF*LCVCGV
Trigger: GACCCCACAGACGCAGAGCAAGAAAAAGAACAGGAA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGTTCTGATGTGTGCTTaGAGCACGCCTGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: AGVDRATVACSLQTVLWFVLMCA*STPAET
Trigger: TGTTTCTGCAGGCGTGCTCAAAGCACACATCAGAAC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCGGGTGAGGCTGCCATaGGTGGTGAAGGAAGCATTG +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYRVRLP*VVKEAL
Trigger: CAATGCTTCCTTCACCACCAATGGCAGCCTCACCCG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATTCTTTCTTGCAGGCCTaGCAGGCATGCTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYSFLQA*QACCRV
Trigger: AACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGA...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGGGGAGCTCGGCTGGCTaGAGGCCGACGTGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLGSSAG*RPTWLG
Trigger: CCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCCC...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAGGTCCGTCTGCTCATTaGAAACGCTGGAAACATCTG +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLGPSAH*KRWKHL
Trigger: CAGATGTTTCCAGCGTTTCAAATGAGCAGACGGACC...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCACCAGGTCGCTGGGCTaGCGGAACTCCTTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVTRSLG*RNSLAQ
Trigger: CTGCGCCAAGGAGTTCCGCAAGCCCAGCGACCTGGT...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATATGCAGTACTGGCACTaGAACGCCTTGATGCCGGTG +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYMQYWH*NALMPV
Trigger: CACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCAT...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GGAAACGCAGCCGCTTGGGCATTATCTAGCAGGTGGGACTCCACACATGCTACAATGCAGTACTGGCACTaGAACGCCTTGATGCCGGTG +
Preference number: 5 (lower is better)
Translates to: GNAAAWALSSRWDSTHATMQYWH*NALMPV
Trigger: CACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCAT...TGTAGCATGTGTGGAGTCCCACCTGCTAGATAATGCCCAAGCGGCTGCGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGATCTCCACCTGCATTaGAGTGGAGGCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYDLHLH*SGGLHA
Trigger: AGCATGCAGGCCTCCACTCAAATGCAGGTGGAGATC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATCTGCTCTGGTCCTCGTaGTCCTCCAGAAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYLLWSS*SSRNWE
Trigger: TTCCCAGTTTCTGGAGGACAACGAGGACCAGAGCAG...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCCTGCTCTGGTCCTCGTaGTCCTCCAGAAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVLLWSS*SSRNWE
Trigger: TTCCCAGTTTCTGGAGGACAACGAGGACCAGAGCAG...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTCCTTCTCTGGCTGGTaGCCCGGGGCCAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVSFSGW*PGARFP
Trigger: TGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGGA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp GGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTAATCCCTCATGTGGCGTaGAAACTGGGATTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: GWTGPPLLAPCRRFCGFLIPHVA*KLGFFW
Trigger: CCAAAAGAATCCCAGTTTCAACGCCACATGAGGGAT...TAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGTGTCTGCATGTGCTCCTTGAGGTGCGTGGCGCGCTTGAAGGCCTTCCTGCACTTCAACATTAAATGTTaGGGGGCACTGGTCACATCG +
Preference number: 5 (lower is better)
Translates to: CVCMCSLRCVARLKAFLHFNIKC*GALVTS
Trigger: CGATGTGACCAGTGCCCCCAAACATTTAATGTTGAA...GTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCAAGGAGCACATGCAGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp ACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGGTCGCGTTAACTGGCTaGGCTTTTGAAACGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TGPPLLAPCRRFCGFLPAVALTG*AFETSF
Trigger: GAAAGACGTTTCAAAAGCCAAGCCAGTTAACGCGAC...CGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTGTGGTGCAGAGGTCTaGGCATGGCAGGAGTCATTA +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVCGAEV*AWQESL
Trigger: TAATGACTCCTGCCATGCCAAGACCTCTGCACCACA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTGGAATGCTGTAGGAATGGCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGTTCTGATGTGTGCTTaGAGCACGCCTGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: LECCRNGVHALCPARVGFVLMCA*STPAET
Trigger: TGTTTCTGCAGGCGTGCTCAAAGCACACATCAGAAC...AAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGCCATTCCTACAGCATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGATGTGTGCTTaGAGCACGCCTGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: CFLFAGVDRATVACSLQTVLMCA*STPAET
Trigger: TGTTTCTGCAGGCGTGCTCAAAGCACACATCAGAAC...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTGCCTGCTGATGCTGTaGGAGCTGCTGGGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: IRGLKLQICFLFAGVDRACLLML*ELLGKL
Trigger: GAGCTTGCCCAGCAGCTCCAACAGCATCAGCAGGCA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAGATCTCCACCTGCATTaGAGTGGAGGCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: SIAVRPLHVQLHVALLREDLHLH*SGGLHA
Trigger: AGCATGCAGGCCTCCACTCAAATGCAGGTGGAGATC...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCAGCAGTTGGCGTGCTaGGGCTCGTCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYQQLAC*GSSCSS
Trigger: GGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAATCGCAATGCGGGCATTaGAAGGGCTTGGCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAESQCGH*KGLAPV
Trigger: CACGGGAGCCAAGCCCTTCAAATGCCCGCATTGCGA...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTCGCAATGCGGGCATTaGAAGGGCTTGGCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: IRGLKLQICFLFAGVDRASQCGH*KGLAPV
Trigger: CACGGGAGCCAAGCCCTTCAAATGCCCGCATTGCGA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCGCCCACCAGTCCTGGTaGCAGCAGATTCTGATCAAA +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVAHQSW*QQILIK
Trigger: TTTGATCAGAATCTGCTGCAACCAGGACTGGTGGGC...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CAGCGCACTCTTCTGGTTGAAGGCTTTCTCACAAAGCGTGCAATGGAACGGCCGTTGCGAAGTCATCACTaGAGTGAGGTCTTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: QRTLLVEGFLTKRAMERPLRSHH*SEVLGP
Trigger: GGGACCCAAGACCTCACTCAAGTGATGACTTCGCAA...CGGCCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGAGACATCGGTGTTGTaGAAGGAAGGCTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYETSVL*KEGFRL
Trigger: CAAGCGGAAGCCTTCCTTCAACAACACCGATGTCTC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCATGGAGACATCGGTGTaGTTGAAGGAAGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVMETSV*LKEGFR
Trigger: GCGGAAGCCTTCCTTCAACAACACCGATGTCTCCAT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTCCTTCTCTGGCTGGTaGCCCGGGGCCAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYSFSGW*PGARFP
Trigger: TGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGGA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAACAGGGCCACCGTTGCTaGCTCCTTGCAGACGGTTCT +
Preference number: 5 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEQGHRC*LLADGS
Trigger: AGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTG...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGAGATATGCTTCTTATTaGCTGGGGTGGACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: CFLFAGVDRATVACSLQTRYASY*LGWTGP
Trigger: TGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCT...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTAAGGAAACCTCCGGATaGGTAAGAAGTCCAGTATCA +
Preference number: 5 (lower is better)
Translates to: AGVDRATVACSLQTVLWFKETSG*VRSPVS
Trigger: TGATACTGGACTTCTTACCAATCCGGAGGTTTCCTT...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 90 bp GTGGGGTCCGTCTGCTCATTTGAAACGCTGGAAACATCTGGGTTTTaGGCGTGTGGTGCAGAGGTCTTGGCATGGCAGGAGTCATTAGGA +
Preference number: 5 (lower is better)
Translates to: VGSVCSFETLETSGF*ACGAEVLAWQESLG
Trigger: TCCTAATGACTCCTGCCATGCCAAGACCTCTGCACCACACGCTCAAAACCCAGATGTTTCCAGCGTTTCAAATGAGCAGACGGACCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583488.1
CDS-3UTR CAA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAATGGCACTTGAACGCCTaGATGCCGGTGTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAEWHLNA*MPVCVL
Trigger: CAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCA...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGATGGGATCTGATGTGTaGTTTAAGGTGGCAAGATTT +
Preference number: 5 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLMGSDV*FKVARF
Trigger: AAATCTTGCCACCTTAAACAACACATCAGATCCCAT...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACTGCTCTGGTCCTCGTaGTCCTCCAGAAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: LADGSVVSYLRCMACASALLWSS*SSRNWE
Trigger: TTCCCAGTTTCTGGAGGACAACGAGGACCAGAGCAG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTCCTGCGGCCGGATCTaGGCTAACTGGGCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYSCGRI*ANWAVS
Trigger: GGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGGA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCAGGTCGCTAGGTTTCTaGAAGCTCTTGGGGCAGTAT +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVRSLGF*KLLGQY
Trigger: ATACTGCCCCAAGAGCTTCAAGAAACCTAGCGACCT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGCCCACCAGTCCTGGTaGCAGCAGATTCTGATCAAA +
Preference number: 5 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYAHQSW*QQILIK
Trigger: TTTGATCAGAATCTGCTGCAACCAGGACTGGTGGGC...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATCACTTGAGTGAGGTCTaGGGTCCCACTGCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: PPLLAPCRRFCGFLPAMYHLSEV*GPTAVS
Trigger: ACTAACAGCAGTGGGACCCAAGACCTCACTCAAGTG...ATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTCCAGCTGGCTTGGTTaGGCAAATGCCTTCTCACAA +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVSSWLG*ANAFSQ
Trigger: TTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTGAGATTCCAAGTGCTTaGCTCTTCACAAAACGTAAC +
Preference number: 5 (lower is better)
Translates to: AGVDRATVACSLQTVLWFEIPSA*LFTKRN
Trigger: GTTACGTTTTGTGAAGAGCAAAGCACTTGGAATCTC...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAAGAGGAGAGTGGCATTaGATGAGCCTCCCACTGACC +
Preference number: 5 (lower is better)
Translates to: LADGSVVSYLRCMACASARGEWH*MSLPLT
Trigger: GGTCAGTGGGAGGCTCATCAAATGCCACTCTCCTCT...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS GCA 90 bp AACACGTTTGGGTCAGTAGAGGAGGAGTTGAGGAGGTTTACAGGCTaGAGTCCTTCCGATGAGCTTCGAGTCATAGGCTTTCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: NTFGSVEEELRRFTG*SPSDELRVIGFLAF
Trigger: GAAGGCCAGAAAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCTCAACTCCTCCTCTACTGACCCAAACGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AACGGCCGCTCCCCTGTATGTATGCGGCTGTGGCGCTCCAGCTGGCTTGGTTTGGAAACTGGGATTCTTTaGGAAAAGATAGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: NGRSPVCMRLWRSSWLGLETGIL*EKIVDR
Trigger: TCTGTCTACTATCTTTTCCAAAAGAATCCCAGTTTC...CAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGGCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTCGCGTTAACTGGCTaGGCTTTTGAAACGTCTTTC +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYVALTG*AFETSF
Trigger: GAAAGACGTTTCAAAAGCCAAGCCAGTTAACGCGAC...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTTTTCACCTGTGTGCTaGATCATGTGGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYFSPVC*IMWVCS
Trigger: ACTGCAGACCCACATGATCAAGCACACAGGTGAAAA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTTCTTATTTGCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGCCACCCATATGCATCTaGCTGATATGCGTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: CFLFAGVDRATVACSLQTPPICI*LICVFK
Trigger: CTTAAACACGCATATCAGCAAGATGCATATGGGTGG...CGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGCAAATAAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGGAAACATCTGGGTTTaGAGCGTGTGGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LADGSVVSYLRCMACASAGNIWV*SVWCRG
Trigger: ACCTCTGCACCACACGCTCAAAACCCAGATGTTTCC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCATGCAGTACTGGCACTaGAACGCCTTGATGCCGGTG +
Preference number: 5 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAMQYWH*NALMPV
Trigger: CACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCAT...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATCCTGCGGCCGGATCTaGGCTAACTGGGCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGSCGRI*ANWAVS
Trigger: GGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGGA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCATGGCTCAGGCTGGAGTaGTTAATGGTCAGGGTGATC +
Preference number: 5 (lower is better)
Translates to: LADGSVVSYLRCMACASAWLRLE*LMVRVI
Trigger: GATCACCCTGACCATTAACAACTCCAGCCTGAGCCA...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCTTGTCATGGAGAGAATaGGTCCAGCCATCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVLSWRE*VQPSLK
Trigger: CTTGAGAGATGGCTGGACCAATTCTCTCCATGACAA...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGTGCTTCATGGTTACTaGAGCACACAAGCAGGATCA +
Preference number: 5 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMVLHGY*STQAGS
Trigger: TGATCCTGCTTGTGTGCTCAAGTAACCATGAAGCAC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS TCA 90 bp AGTAGAGGAGGAGTTGAGGAGGTTTACAGGCTGCAGTCCTTCCGATaGGCTTCGAGTCATAGGCTTTCTGGCCTTCTTTGGGTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: SRGGVEEVYRLQSFR*ASSHRLSGLLWVWF
Trigger: AAACCAGACCCAAAGAAGGCCAGAAAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCTCAACTCCTCCTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 90 bp GACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGTAGTGTTAAGTTCGGAGATAGTCAG +
Preference number: 5 (lower is better)
Translates to: DQVLSRDGRWRHRCC*RKASACSVKFGDSQ
Trigger: CTGACTATCTCCGAACTTAACACTACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000320610.14
CDS TCA 90 bp GACCAGGTTCTGAGTCGAGATGGCCGATGGAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGTAGTGTTAAGTTTTGTCGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: DQVLSRDGRWRHRCC*RKASACSVKFCRWS
Trigger: ACTCCAGCGACAAAACTTAACACTACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGTTCAACATTAAATGTTaGGGGGCACTGGTCACATCG +
Preference number: 5 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMFNIKC*GALVTS
Trigger: CGATGTGACCAGTGCCCCCAAACATTTAATGTTGAA...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATTTCAACATTAAATGTTaGGGGGCACTGGTCACATCG +
Preference number: 5 (lower is better)
Translates to: ACTHSAQHGWDLVWDMFYFNIKC*GALVTS
Trigger: CGATGTGACCAGTGCCCCCAAACATTTAATGTTGAA...ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACAAGCACTGATGTTCATGTCCCACCAGCAGAACACTGTCAGGAAGAGGAGAGGAAACATCTGGGTTTaGAGCGTGTGGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RQALMFMSHQQNTVRKRRGNIWV*SVWCRG
Trigger: ACCTCTGCACCACACGCTCAAAACCCAGATGTTTCC...TCTCCTCTTCCTGACAGTGTTCTGCTGGTGGGACATGAACATCAGTGCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTGCCAACACGGACCTTaGCAGGTTTACGCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYCQHGP*QVYAGA
Trigger: GGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAAACTGGAATATTCGTCTaGCCAACACGGACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SIAVRPLHVQLHVALLRETGIFV*PTRTFA
Trigger: TGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGT...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTGGTTCGAAGGACTGTaGCGCAGGGCTCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: CSWGGETDALSAIRTSTYWFEGL*RRALLF
Trigger: GAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACCA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTCTGCTGGTGGAAGCTaGTGGAGAGGGCCTGAGACT +
Preference number: 5 (lower is better)
Translates to: CSWGGETDALSAIRTSTYSAGGS*WRGPET
Trigger: AGTCTCAGGCCCTCTCCACAAGCTTCCACCAGCAGA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATGCAGCTCCGCCTGCTaGTCCCTCAGCTCACTGATG +
Preference number: 5 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGCSSAC*SLSSLM
Trigger: CATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCGGTTTCTTGAAGCTCTaGGGGCAGTATGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAGFLKL*GQYVQQ
Trigger: CTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACC...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGCGTGAACAGCACGGGTGGGATTaGGTTTGGGACATGTTTTAT +
Preference number: 5 (lower is better)
Translates to: SIAVRPLHVQLHVALLREQHGWD*VWDMFY
Trigger: ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTG...TTCACGCAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp AGCTCCAGCATAGCTGTGCGCCCGCTTCATGTGCAGCTTCATGTTGCTCTTCTGAAGGAAACCTCCGGATaGGTAAGAAGTCCAGTATCA +
Preference number: 5 (lower is better)
Translates to: SSSIAVRPLHVQLHVALLKETSG*VRSPVS
Trigger: TGATACTGGACTTCTTACCAATCCGGAGGTTTCCTT...CAGAAGAGCAACATGAAGCTGCACATGAAGCGGGCGCACAGCTATGCTGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp GCTGGGGTGGACAGGGCCACCGTTGCTTGCTCCTTGCAGACGGTTCTGTGGTTTTCACGTTTGGTATCTTaGCAAAGGCAATTCATTCTT +
Preference number: 5 (lower is better)
Translates to: AGVDRATVACSLQTVLWFSRLVS*QRQFIL
Trigger: AAGAATGAATTGCCTTTGCAAAGATACCAAACGTGA...AAACCACAGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTGTCCACCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS TCA 90 bp CAGAAACTGGGAACCTTGTGCCTGCAGGTCCAGTTCCTCTTGGGATaGCTCCTGAATCAAGCGAGTTGTTACATTCATCCCATCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QKLGTLCLQVQFLLG*LLNQASCYIHPIRA
Trigger: AGCTCTGATGGGATGAATGTAACAACTCGCTTGATTCAGGAGTCATCCCAAGAGGAACTGGACCTGCAGGCACAAGGTTCCCAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp TTAGTGTTCTCCGCATTCAATGTTAAAACTCCATCTGGGTCATGGTaGAGCCAACATCTCTCCAGCAGCCCACAAAGGCCCATGAGGTGT +
Preference number: 5 (lower is better)
Translates to: LVFSAFNVKTPSGSW*SQHLSSSPQRPMRC
Trigger: ACACCTCATGGGCCTTTGTGGGCTGCTGGAGAGATGTTGGCTGCACCATGACCCAGATGGAGTTTTAACATTGAATGCGGAGAACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS-3UTR CAA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAGTCGCGTTAACTGGCTaGGCTTTTGAAACGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LADGSVVSYLRCMACASAVALTG*AFETSF
Trigger: GAAAGACGTTTCAAAAGCCAAGCCAGTTAACGCGAC...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTTCTGCTGGTGGAAGCTaGTGGAGAGGGCCTGAGACT +
Preference number: 5 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLSAGGS*WRGPET
Trigger: AGTCTCAGGCCCTCTCCACAAGCTTCCACCAGCAGA...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTTGCGAAGTCATCACTaGAGTGAGGTCTTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVLRSHH*SEVLGP
Trigger: GGGACCCAAGACCTCACTCAAGTGATGACTTCGCAA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTGGCGCTCCAGCTGGCTaGGTTTGGCAAATGCCTTCT +
Preference number: 5 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLGAPAG*VWQMPS
Trigger: AGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCC...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp CGTGCACGCACTCTGCCCAGCACGGGTGGGATTTGGTTTGGGACATGTTTTATGGAGATTCCAAGTGCTTaGCTCTTCACAAAACGTAAC +
Preference number: 5 (lower is better)
Translates to: RARTLPSTGGIWFGTCFMEIPSA*LFTKRN
Trigger: GTTACGTTTTGTGAAGAGCAAAGCACTTGGAATCTC...CATAAAACATGTCCCAAACCAAATCCCACCCGTGCTGGGCAGAGTGCGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTTGCAGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCACAGCACGGGTGGGATTaGGTTTGGGACATGTTTTAT +
Preference number: 5 (lower is better)
Translates to: LADGSVVSYLRCMACASAQHGWD*VWDMFY
Trigger: ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTG...TGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 90 bp GGATTGGTTCCTGCAAAGGAATATCAGGGACTGGAATATTCGTCTTaGCAACACGGACCTTTGCAGGTTTACGCTGGTGCCTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: GLVPAKEYQGLEYSS*QHGPLQVYAGASFS
Trigger: GGAAAATGAGGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGGAACCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGTCTCGAACTCTTTCTaGCAGGCCTTGCAGGCATGC +
Preference number: 5 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGVSNSF*QALQAC
Trigger: GCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGAC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCCAGCCCGTGTGGACAGCTGAATCCTTATTGGTGGGTCAGGTTTACTCGAGTCATGGGATCTGATGTGTaGTTTAAGGTGGCAAGATTT +
Preference number: 5 (lower is better)
Translates to: ASPCGQLNPYWWVRFTRVMGSDV*FKVARF
Trigger: AAATCTTGCCACCTTAAACAACACATCAGATCCCAT...GACTCGAGTAAACCTGACCCACCAATAAGGATTCAGCTGTCCACACGGGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCACCCCACCTTCACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTGATCTCCACCTGCATTaGAGTGGAGGCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: APHLHVWYLCKGNSFFQLDLHLH*SGGLHA
Trigger: AGCATGCAGGCCTCCACTCAAATGCAGGTGGAGATC...AAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCGGGTGAGGCTGCCATaGGTGGTGAAGGAAGCATTG +
Preference number: 5 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGRVRLP*VVKEAL
Trigger: CAATGCTTCCTTCACCACCAATGGCAGCCTCACCCG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGAGGTGCGTGGCGCGCTaGAAGGCCTTCCTGCACACG +
Preference number: 5 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGRCVAR*KAFLHT
Trigger: CGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACCT...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAGTCTGCATGTGCTCCTaGAGGTGCGTGGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVVCMCS*RCVARL
Trigger: CAAGCGCGCCACGCACCTCAAGGAGCACATGCAGAC...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTCCAGCTGGCTTGGTTaGGCAAATGCCTTCTCACAA +
Preference number: 5 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVSSWLG*ANAFSQ
Trigger: TTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCTTGTCATGGAGAGAATaGGTCCAGCCATCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: IRGLKLQICFLFAGVDRALSWRE*VQPSLK
Trigger: CTTGAGAGATGGCTGGACCAATTCTCTCCATGACAA...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCCCACCAGCAGAATCTTCTGACTGCCTGTaGCTCCTGCCATTCATACTA +
Preference number: 5 (lower is better)
Translates to: HPLVKCQTSTDVHVPPAESSDCL*LLPFIL
Trigger: TAGTATGAATGGCAGGAGCAACAGGCAGTCAGAAGA...TTCTGCTGGTGGGACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS TCA 90 bp TTACACACAGGGCAGGTAGGATCTTCCCCGCTGTGGGTGCATTTATaGAGTGTCAGGTTGAATTCAACATTAAATGTTTGGGGGCACTGG +
Preference number: 5 (lower is better)
Translates to: LHTGQVGSSPLWVHL*SVRLNSTLNVWGHW
Trigger: CCAGTGCCCCCAAACATTTAATGTTGAATTCAACCTGACACTTCATAAATGCACCCACAGCGGGGAAGATCCTACCTGCCCTGTGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS GCA 90 bp GGAATGGGCTGGATGAGACCTAAGTCAGTTATGAGGATTGGTTCCTaGAAAGGAATATCAGGGACTGGAATATTCGTCTTGCCAACACGG +
Preference number: 5 (lower is better)
Translates to: GMGWMRPKSVMRIGS*KGISGTGIFVLPTR
Trigger: CCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGGAACCAATCCTCATAACTGACTTAGGTCTCATCCAGCCCATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp GCACGAAGGAAACATCCCCTAGTTAAGTGCCAGACAAGCACTGATGTTCATGTCTTTTCACCTGTGTGCTaGATCATGTGGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: ARRKHPLVKCQTSTDVHVFSPVC*IMWVCS
Trigger: ACTGCAGACCCACATGATCAAGCACACAGGTGAAAA...GACATGAACATCAGTGCTTGTCTGGCACTTAACTAGGGGATGTTTCCTTCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGTGTGGTGCAGAGGTCTaGGCATGGCAGGAGTCATTA +
Preference number: 5 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLCGAEV*AWQESL
Trigger: TAATGACTCCTGCCATGCCAAGACCTCTGCACCACA...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTTCCTGTTCTTTTTCTaGCTCTGCGTCTGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYFLFFF*LCVCGV
Trigger: GACCCCACAGACGCAGAGCAAGAAAAAGAACAGGAA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATGCCTGCTGATGCTGTaGGAGCTGCTGGGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVCLLML*ELLGKL
Trigger: GAGCTTGCCCAGCAGCTCCAACAGCATCAGCAGGCA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATAGCAGAGGGGACTGTTaGGTGTCTCTTCATGTGCTT +
Preference number: 5 (lower is better)
Translates to: CSWGGETDALSAIRTSTYSRGDC*VSLHVL
Trigger: AAGCACATGAAGAGACACCAAACAGTCCCCTCTGCT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATGCAGCTCCGCCTGCTaGTCCCTCAGCTCACTGATG +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVCSSAC*SLSSLM
Trigger: CATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTACAGTATGTGCAGCAGTaGGCGTGCTTGGGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVQYVQQ*ACLGSS
Trigger: GGACGAGCCCAAGCACGCCAACTGCTGCACATACTG...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTTGGCTCAGGCTGGAGTaGTTAATGGTCAGGGTGATC +
Preference number: 5 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSWLRLE*LMVRVI
Trigger: GATCACCCTGACCATTAACAACTCCAGCCTGAGCCA...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATAGATATGCTTCTTATTaGCTGGGGTGGACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYRYASY*LGWTGP
Trigger: TGGCCCTGTCCACCCCAGCAAATAAGAAGCATATCT...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCGGGTGGGATTTGGTTaGGGACATGTTTTATGTGGC +
Preference number: 5 (lower is better)
Translates to: CSWGGETDALSAIRTSTYRVGFG*GHVLCG
Trigger: GCCACATAAAACATGTCCCAAACCAAATCCCACCCG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATCCAGCTCAGTGGCCTTaGGCGTACGATCTTTTCATT +
Preference number: 5 (lower is better)
Translates to: CSWGGETDALSAIRTSTYPAQWP*AYDLFI
Trigger: AATGAAAAGATCGTACGCCAAAGGCCACTGAGCTGG...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS TCA 90 bp TCACCTGTGTGTATCCTAATGTGTCGCGTTAACTGGCTTGGCTTTTaGAACGTCTTTCCACAGTGCGGACACGAATACGTGAATCCACTT +
Preference number: 5 (lower is better)
Translates to: SPVCILMCRVNWLGF*NVFPQCGHEYVNPL
Trigger: AAGTGGATTCACGTATTCGTGTCCGCACTGTGGAAAGACGTTTCAAAAGCCAAGCCAGTTAACGCGACACATTAGGATACACACAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATAGCATAATATGCGCTTaGAGACTAGCCACTCTGGAG +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYSIICA*RLATLE
Trigger: CTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCT...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCTTTCTTGCAGGCCTaGCAGGCATGCTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVSFLQA*QACCRV
Trigger: AACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGGTCTCGAACTCTTTCTaGCAGGCCTTGCAGGCATGC +
Preference number: 5 (lower is better)
Translates to: LKPARWLLASLSISNTKLVSNSF*QALQAC
Trigger: GCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGAC...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGAGTGCTGCAGCTGGAATaGAAGACAGCCCACTGTTTT +
Preference number: 5 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGVLQLE*KTAHCF
Trigger: AAAACAGTGGGCTGTCTTCAATTCCAGCTGCAGCAC...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CAGCTGGCTTGGTTTGGCAAATGCCTTCTCACAAGTGTCACATTTAAACACTCTGTGCTGCAGCTGGAATaGAAGACAGCCCACTGTTTT +
Preference number: 5 (lower is better)
Translates to: QLAWFGKCLLTSVTFKHSVLQLE*KTAHCF
Trigger: AAAACAGTGGGCTGTCTTCAATTCCAGCTGCAGCAC...AGAGTGTTTAAATGTGACACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS-3UTR CAA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGATTCCTGTTCTTTTTCTaGCTCTGCGTCTGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGFLFFF*LCVCGV
Trigger: GACCCCACAGACGCAGAGCAAGAAAAAGAACAGGAA...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGATGCCGGTGTGCGTCTaGATGTGCGCTGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGMPVCV*MCAVSV
Trigger: CACGCTGACAGCGCACATCAAGACGCACACCGGCAT...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATGCCAACACGGACCTTaGCAGGTTTACGCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVCQHGP*QVYAGA
Trigger: GGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATACTGGAATATTCGTCTaGCCAACACGGACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: CSWGGETDALSAIRTSTYTGIFV*PTRTFA
Trigger: TGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGT...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAGCACAATTACAGTTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGAGGTCGCTAGGTTTCTaGAAGCTCTTGGGGCAGTAT +
Preference number: 5 (lower is better)
Translates to: LAQLQLFCICGYSQVYTLRSLGF*KLLGQY
Trigger: ATACTGCCCCAAGAGCTTCAAGAAACCTAGCGACCT...CAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAACTGTAATTGTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGATCGCAATGCGGGCATTaGAAGGGCTTGGCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRSQCGH*KGLAPV
Trigger: CACGGGAGCCAAGCCCTTCAAATGCCCGCATTGCGA...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTTGTCATGGAGAGAATaGGTCCAGCCATCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYLSWRE*VQPSLK
Trigger: CTTGAGAGATGGCTGGACCAATTCTCTCCATGACAA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCAGCACGGGTGGGATTaGGTTTGGGACATGTTTTAT +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYQHGWD*VWDMFY
Trigger: ATAAAACATGTCCCAAACCAAATCCCACCCGTGCTG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTATTCTGCATATGCGGCTACAGCCAGGTTTACACACTGACATTCAAGGAAGGACCAGCACGGTGGCTTTaGGCATCACTATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: LFCICGYSQVYTLTFKEGPARWL*ASLSIS
Trigger: AGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGG...TCCTTCCTTGAATGTCAGTGTGTAAACCTGGCTGTAGCCGCATATGCAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS TCA 90 bp GGCTTGGCTTTTGAAACGTCTTTCCACAGTGCGGACACGAATACGTaGATCCACTTCTGTCGATATTCCGGTTATAAGACCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: GLAFETSFHSADTNT*IHFCRYSGYKTLYL
Trigger: CAAGTACAAGGTCTTATAACCGGAATATCGACAGAAGTGGATTCACGTATTCGTGTCCGCACTGTGGAAAGACGTTTCAAAAGCCAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS-3UTR CAA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATTGGTTCGAAGGACTGTaGCGCAGGGCTCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SWRELVQPSLKVSVILTYWFEGL*RRALLF
Trigger: GAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACCA...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCAGCAGAGGGGACTGTTaGGTGTCTCTTCATGTGCTT +
Preference number: 5 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGSRGDC*VSLHVL
Trigger: AAGCACATGAAGAGACACCAAACAGTCCCCTCTGCT...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCAGTATGTGCAGCAGTaGGCGTGCTTGGGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFQYVQQ*ACLGSS
Trigger: GGACGAGCCCAAGCACGCCAACTGCTGCACATACTG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGGTTTCTTGAAGCTCTaGGGGCAGTATGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWGFLKL*GQYVQQ
Trigger: CTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGCACTTGAGTGAGGTCTaGGGTCCCACTGCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWHLSEV*GPTAVS
Trigger: ACTAACAGCAGTGGGACCCAAGACCTCACTCAAGTG...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAGGCGCTCCAGCTGGCTaGGTTTGGCAAATGCCTTCT +
Preference number: 5 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRGAPAG*VWQMPS
Trigger: AGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCC...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTCAGGGCCACCGTTGCTaGCTCCTTGCAGACGGTTCT +
Preference number: 5 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFQGHRC*LLADGS
Trigger: AGAACCGTCTGCAAGGAGCAAGCAACGGTGGCCCTG...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGGTGCTGCAGCTGGAATaGAAGACAGCCCACTGTTTT +
Preference number: 5 (lower is better)
Translates to: LKPARWLLASLSISNTKLVLQLE*KTAHCF
Trigger: AAAACAGTGGGCTGTCTTCAATTCCAGCTGCAGCAC...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGAGGTCGCTAGGTTTCTaGAAGCTCTTGGGGCAGTAT +
Preference number: 5 (lower is better)
Translates to: LKPARWLLASLSISNTKLRSLGF*KLLGQY
Trigger: ATACTGCCCCAAGAGCTTCAAGAAACCTAGCGACCT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp ATTCGTGGCCTTAAGCTACAGATATGCTTCTTATTTGCTGGGGTGGACAGGGCCCCTGTTAGAACAGAGTaGTTCATGATAAACACGTTT +
Preference number: 5 (lower is better)
Translates to: IRGLKLQICFLFAGVDRAPVRTE*FMINTF
Trigger: AAACGTGTTTATCATGAACAACTCTGTTCTAACAGG...GGCCCTGTCCACCCCAGCAAATAAGAAGCATATCTGTAGCTTAAGGCCACGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATTGCGAAGTCATCACTaGAGTGAGGTCTTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVLRSHH*SEVLGP
Trigger: GGGACCCAAGACCTCACTCAAGTGATGACTTCGCAA...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGCCCACCAGTCCTGGTaGCAGCAGATTCTGATCAAA +
Preference number: 5 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGAHQSW*QQILIK
Trigger: TTTGATCAGAATCTGCTGCAACCAGGACTGGTGGGC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGACCCCACCTTCACGTTaGGTATCTTTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LKPARWLLASLSISNTKLTPPSR*VSLQRQ
Trigger: TTGCCTTTGCAAAGATACCAAACGTGAAGGTGGGGT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTAATCCCTCATGTGGCGTaGAAACTGGGATTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVIPHVA*KLGFFW
Trigger: CCAAAAGAATCCCAGTTTCAACGCCACATGAGGGAT...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGCCACCCATATGCATCTaGCTGATATGCGTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LKPARWLLASLSISNTKLPPICI*LICVFK
Trigger: CTTAAACACGCATATCAGCAAGATGCATATGGGTGG...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGGGTCCGTCTGCTCATTaGAAACGCTGGAAACATCTG +
Preference number: 5 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGGPSAH*KRWKHL
Trigger: CAGATGTTTCCAGCGTTTCAAATGAGCAGACGGACC...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAAGCAGAGGGGACTGTTaGGTGTCTCTTCATGTGCTT +
Preference number: 5 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRSRGDC*VSLHVL
Trigger: AAGCACATGAAGAGACACCAAACAGTCCCCTCTGCT...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATCCTGTTAGAACAGAGTaGTTCATGATAAACACGTTT +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYPVRTE*FMINTF
Trigger: AAACGTGTTTATCATGAACAACTCTGTTCTAACAGG...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTGAGACATCGGTGTTGTaGAAGGAAGGCTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFETSVL*KEGFRL
Trigger: CAAGCGGAAGCCTTCCTTCAACAACACCGATGTCTC...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGAATTTTTATGGAGACATCGGTGTaGTTGAAGGAAGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: SSKPWLYMRPRNLFSRIFMETSV*LKEGFR
Trigger: GCGGAAGCCTTCCTTCAACAACACCGATGTCTCCAT...AAAAATTCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TGCTCGTGGGGAGGTGAAACTGACGCTCTTTCTGCAATTAGGACTAGTACTTATTTTTATGTGGCACCATaGACGATACTAAAGAATTCC +
Preference number: 5 (lower is better)
Translates to: CSWGGETDALSAIRTSTYFYVAP*TILKNS
Trigger: GGAATTCTTTAGTATCGTCAATGGTGCCACATAAAA...ATAAGTACTAGTCCTAATTGCAGAAAGAGCGTCAGTTTCACCTCCCCACGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp AGACGGTTCTGTGGTTTCCTACCTGCGATGTATGGCTTGTGCTTCTGCAATTATTTTTATGTGGCACCATaGACGATACTAAAGAATTCC +
Preference number: 5 (lower is better)
Translates to: RRFCGFLPAMYGLCFCNYFYVAP*TILKNS
Trigger: GGAATTCTTTAGTATCGTCAATGGTGCCACATAAAA...ATAATTGCAGAAGCACAAGCCATACATCGCAGGTAGGAAACCACAGAACCGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TCTTTATCCTCAAAACCCTGGTTATACATGAGGCCTAGAAATCTCTTTTCTAGACGGGTGGGATTTGGTTaGGGACATGTTTTATGTGGC +
Preference number: 5 (lower is better)
Translates to: SLSSKPWLYMRPRNLFSRRVGFG*GHVLCG
Trigger: GCCACATAAAACATGTCCCAAACCAAATCCCACCCG...TCTAGAAAAGAGATTTCTAGGCCTCATGTATAACCAGGGTTTTGAGGATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp TTAAAGCCAGCACGGTGGCTTTTGGCATCACTATCCATTTCTAATACAAAACTGAAGGAAACCTCCGGATaGGTAAGAAGTCCAGTATCA +
Preference number: 5 (lower is better)
Translates to: LKPARWLLASLSISNTKLKETSG*VRSPVS
Trigger: TGATACTGGACTTCTTACCAATCCGGAGGTTTCCTT...CAGTTTTGTATTAGAAATGGATAGTGATGCCAAAAGCCACCGTGCTGGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp TCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTATCAGTTATATTAACTTATAGATACGACATTAAATaGGGTGGTGCGTGTAGGCGC +
Preference number: 5 (lower is better)
Translates to: SWRELVQPSLKVSVILTYRYDIK*GGACRR
Trigger: GCGCCTACACGCACCACCCAATTTAATGTCGTATCT...ATAAGTTAATATAACTGATACCTTGAGAGATGGCTGGACCAATTCTCTCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp AATTCCCTGAAATCAAAAATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTCACCTGTGTGCTaGATCATGTGGGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: NSLKSKIHLFMHEEKVMGFSPVC*IMWVCS
Trigger: ACTGCAGACCCACATGATCAAGCACACAGGTGAAAA...CCCCATGACTTTCTCTTCGTGCATAAACAGATGTATTTTTGATTTCAGGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp CTAATGATTAAACATTTGTCATGGAGAGAATTGGTCCAGCCATCTCTCAAGGTACCACCCATATGCATCTaGCTGATATGCGTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LMIKHLSWRELVQPSLKVPPICI*LICVFK
Trigger: CTTAAACACGCATATCAGCAAGATGCATATGGGTGG...TACCTTGAGAGATGGCTGGACCAATTCTCTCCATGACAAATGTTTAATCATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ACAGATACGACATTAAATTGGGTGGTGCGTGTAGGCGCTTTTGAAATTTCATTCAATGACTGGGTGCCGTaGAATAAAGCAGCAAATGAA +
Preference number: 5 (lower is better)
Translates to: TDTTLNWVVRVGAFEISFNDWVP*NKAANE
Trigger: TTCATTTGCTGCTTTATTCAACGGCACCCAGTCATT...GAATGAAATTTCAAAAGCGCCTACACGCACCACCCAATTTAATGTCGTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS GCA 90 bp CACTCAGAACAGATGAGATTCTCTTCCTTTTCATGTAGCATAATATaGGCTTTGAGACTAGCCACTCTGGAGAATTTCTTGTTACACACA +
Preference number: 5 (lower is better)
Translates to: HSEQMRFSSFSCSII*ALRLATLENFLLHT
Trigger: TGTGTGTAACAAGAAATTCTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCTACATGAAAAGGAAGAGAATCTCATCTGTTCTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS-3UTR CAA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCGAAACTGGGATTCTTTaGGAAAAGATAGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGETGIL*EKIVDR
Trigger: TCTGTCTACTATCTTTTCCAAAAGAATCCCAGTTTC...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS-3UTR CAA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGATGGGATCTGATGTGTaGTTTAAGGTGGCAAGATTT +
Preference number: 5 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWMGSDV*FKVARF
Trigger: AAATCTTGCCACCTTAAACAACACATCAGATCCCAT...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp ATACATCTGTTTATGCACGAAGAGAAAGTCATGGGGTTTTTACGGATTCGTGGCCTTCATTTTCATCTATaGCCATTCTATGGAAACGCA +
Preference number: 5 (lower is better)
Translates to: IHLFMHEEKVMGFLRIRGLHFHL*PFYGNA
Trigger: TGCGTTTCCATAGAATGGCAATAGATGAAAATGAAG...GCCACGAATCCGTAAAAACCCCATGACTTTCTCTTCGTGCATAAACAGATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS-3UTR CAA 90 bp ACGTTTGGTATCTTTGCAAAGGCAATTCATTCTTTCAGCTTCAGTGCTTCATGGGAAACTGGGATTCTTTaGGAAAAGATAGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: TFGIFAKAIHSFSFSASWETGIL*EKIVDR
Trigger: TCTGTCTACTATCTTTTCCAAAAGAATCCCAGTTTC...CCATGAAGCACTGAAGCTGAAAGAATGAATTGCCTTTGCAAAGATACCAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320610.14
CDS GCA 72 bp GACTCCACCGGCGCCGGCTCTGAGAGCTCCAGGAGCTaGTGGATGACGTCGCTCACCGCCTGGGAGCTCGGC +
Preference number: 6 (lower is better)
Translates to: DSTGAGSESSRS*WMTSLTAWELG
Trigger: GCCGAGCTCCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTCAGAGCCGGCGCCGGTGGAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS GCA 72 bp CTGAGGCTCCAGGTCCAGCATGGCCTCGGGGTTCGCTaGGACCACCTCTGCCGTCTGCGGCAGCTCGTCGCT +
Preference number: 6 (lower is better)
Translates to: LRLQVQHGLGVR*DHLCRLRQLVA
Trigger: AGCGACGAGCTGCCGCAGACGGCAGAGGTGGTCGCAGCGAACCCCGAGGCCATGCTGGACCTGGAGCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp AGCTCCAGGAGCTGCTGGATGACGTCGCTCACCGCCTaGGAGCTCGGCTGGCTTGAGGCCGACGTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: SSRSCWMTSLTA*ELGWLEADVAW
Trigger: CCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS CCA 72 bp TGCTGGATGACGTCGCTCACCGCCTGGGAGCTCGGCTaGCTTGAGGCCGACGTGGCTTGGGCTTCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: CWMTSLTAWELG*LEADVAWASVC
Trigger: ACAGACGGAAGCCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGTCATCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS CCA 72 bp TGTGGCGGACCAGGTCGCTGGGCTTGCGGAACTCCTTaGCGCAGTAGGGACACACATGCCAGCGCACGCCGT +
Preference number: 6 (lower is better)
Translates to: CGGPGRWACGTP*RSRDTHASARR
Trigger: ACGGCGTGCGCTGGCATGTGTGTCCCTACTGCGCCAAGGAGTTCCGCAAGCCCAGCGACCTGGTCCGCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS CCA 72 bp CTGCCGCGGACTGCACCAGGACCTTCTCTGACACCGTaGCGCTCTCCTGCGGCCGGATCTTGGCTAACTGGG +
Preference number: 6 (lower is better)
Translates to: LPRTAPGPSLTP*RSPAAGSWLTG
Trigger: CCCAGTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAAGGTCCTGGTGCAGTCCGCGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp GATGACGTCGCTCACCGCCTGGGAGCTCGGCTGGCTTaGGGCCGACGTGGCTTGGGCTTCCGTCTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: DDVAHRLGARLA*GRRGLGFRLLK
Trigger: CTTCAACAGACGGAAGCCCAAGCCACGTCGGCCTCAAGCCAGCCGAGCTCCCAGGCGGTGAGCGACGTCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS TCA 72 bp TTCTGTGGGGCCAGGCCAGGCTCCCCCGTGAGCTGCTaGGCCAATAGGTTGCCCTGCTGTAGCGTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FCGARPGSPVSC*ANRLPCCSVCC
Trigger: GCAGCAGACGCTACAGCAGGGCAACCTATTGGCTCAGCAGCTCACGGGGGAGCCTGGCCTGGCCCCACAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp TGCCCGTGTGGGCCCAGCCCTGAGGCCATACCTGTGTaGAGGCGAATGTGCACCTTGAGGCTGCCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: CPCGPSPEAIPV*RRMCTLRLPEV
Trigger: CACCTCTGGCAGCCTCAAGGTGCACATTCGCCTGCACACAGGTATGGCCTCAGGGCTGGGCCCACACGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583488.1
CDS GCA 72 bp TATGTGCGCAGTAATGTGTGTGGCCCCCGTGGCCAGTaGCCGTGTGGGCCCAGCCCTGAGGCCATACCTGTG +
Preference number: 6 (lower is better)
Translates to: YVRSNVCGPRGQ*PCGPSPEAIPV
Trigger: CACAGGTATGGCCTCAGGGCTGGGCCCACACGGGCACTGGCCACGGGGGCCACACACATTACTGCGCACATA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583488.1
CDS CAA 90 bp GTGCAGCAGTTGGCGTGCTTGGGCTCGTCCTGCAGCTCCGCCTGCTaGTCCCTCAGCTCACTGATGCGGTCCTTTTCTGCCGCGGACTGC +
Preference number: 6 (lower is better)
Translates to: VQQLACLGSSCSSAC*SLSSLMRSFSAADC
Trigger: GCAGTCCGCGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp TGTTCCTTCAGCTCCGAGGAGGTCTCGAACTCTTTCTTGCAGGCCTaGCAGGCATGCTGCCGGGTTCCAGCCAGCTCCTGGCGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: CSFSSEEVSNSFLQA*QACCRVPASSWRCS
Trigger: GGAGCACCGCCAGGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGACCTCCTCGGAGCTGAAGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS GCA 72 bp CACTTGAACGCCTTGATGCCGGTGTGCGTCTTGATGTaGGCTGTCAGCGTGCTCTTCACGGCGAAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: HLNALMPVCVLM*AVSVLFTAKAR
Trigger: CCGCGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCATCAAGGCGTTCAAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS GCA 72 bp CTCAGCTCACTGATGCGGTCCTTTTCTGCCGCGGACTaGACCAGGACCTTCTCTGACACCGTGGCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LSSLMRSFSAAD*TRTFSDTVALS
Trigger: GGAGAGCGCCACGGTGTCAGAGAAGGTCCTGGTGCAGTCCGCGGCAGAAAAGGACCGCATCAGTGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp AGCTCTTGGGGCAGTATGTGCAGCAGTTGGCGTGCTTaGGCTCGTCCTGCAGCTCCGCCTGCTTGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: SSWGSMCSSWRA*ARPAAPPACPS
Trigger: TGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp AGCTCCGAGGAGGTCTCGAACTCTTTCTTGCAGGCCTaGCAGGCATGCTGCCGGGTTCCAGCCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSEEVSNSFLQA*QACCRVPASSW
Trigger: CCAGGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGACCTCCTCGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS CAA 72 bp TTGGCGTGCTTGGGCTCGTCCTGCAGCTCCGCCTGCTaGTCCCTCAGCTCACTGATGCGGTCCTTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: LACLGSSCSSAC*SLSSLMRSFSA
Trigger: GGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp AAGCTCTTGGGGCAGTATGTGCAGCAGTTGGCGTGCTaGGGCTCGTCCTGCAGCTCCGCCTGCTTGTCCCTC +
Preference number: 6 (lower is better)
Translates to: KLLGQYVQQLAC*GSSCSSACLSL
Trigger: GAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp CAGTTGGCGTGCTTGGGCTCGTCCTGCAGCTCCGCCTaGTTGTCCCTCAGCTCACTGATGCGGTCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: QLACLGSSCSSA*LSLSSLMRSFS
Trigger: AGAAAAGGACCGCATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp TTGAAGCTCTTGGGGCAGTATGTGCAGCAGTTGGCGTaGTTGGGCTCGTCCTGCAGCTCCGCCTGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: LKLLGQYVQQLA*LGSSCSSACLS
Trigger: GGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp TCGAAGGACTGTTGCGCAGGGCTCTGCTCTTCAAACTaGTCTACGTGCCCTCGCAGAGGGTCCTGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: SKDCCAGLCSSN*STCPRRGSCGA
Trigger: GGCTCCACAGGACCCTCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp ACCGTGGCGCTCTCCTGCGGCCGGATCTTGGCTAACTaGGCTGTCTCCTCCTCCGTGAAAGTGATGACCTCA +
Preference number: 6 (lower is better)
Translates to: TVALSCGRILAN*AVSSSVKVMTS
Trigger: TGAGGTCATCACTTTCACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp TTCTCTGACACCGTGGCGCTCTCCTGCGGCCGGATCTaGGCTAACTGGGCTGTCTCCTCCTCCGTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: FSDTVALSCGRI*ANWAVSSSVKV
Trigger: CACTTTCACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp GGTTTCTTGAAGCTCTTGGGGCAGTATGTGCAGCAGTaGGCGTGCTTGGGCTCGTCCTGCAGCTCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: GFLKLLGQYVQQ*ACLGSSCSSAC
Trigger: GCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp ACCAGGACCTTCTCTGACACCGTGGCGCTCTCCTGCGGCCGGATCTaGGCTAACTGGGCTGTCTCCTCCTCCGTGAAAGTGATGACCTCA +
Preference number: 6 (lower is better)
Translates to: TRTFSDTVALSCGRI*ANWAVSSSVKVMTS
Trigger: TGAGGTCATCACTTTCACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAAGGTCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp GGTTTCTTGAAGCTCTTGGGGCAGTATGTGCAGCAGTTGGCGTGCTaGGGCTCGTCCTGCAGCTCCGCCTGCTTGTCCCTCAGCTCACTG +
Preference number: 6 (lower is better)
Translates to: GFLKLLGQYVQQLAC*GSSCSSACLSLSSL
Trigger: CAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp AGGTCGCTAGGTTTCTTGAAGCTCTTGGGGCAGTATGTGCAGCAGTaGGCGTGCTTGGGCTCGTCCTGCAGCTCCGCCTGCTTGTCCCTC +
Preference number: 6 (lower is better)
Translates to: RSLGFLKLLGQYVQQ*ACLGSSCSSACLSL
Trigger: GAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACCTAGCGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp CTGTGGGCTGTAAGGACAGGCCTGAGATGGGCTGGATaGCAACACTGGCAGGGACCGTGCTGTCCGATGTCT +
Preference number: 6 (lower is better)
Translates to: LWAVRTGLRWAG*QHWQGPCCPMS
Trigger: AGACATCGGACAGCACGGTCCCTGCCAGTGTTGTCATCCAGCCCATCTCAGGCCTGTCCTTACAGCCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp GTCACTGTGGGCTGTAAGGACAGGCCTGAGATGGGCTaGATGACAACACTGGCAGGGACCGTGCTGTCCGAT +
Preference number: 6 (lower is better)
Translates to: VTVGCKDRPEMG*MTTLAGTVLSD
Trigger: ATCGGACAGCACGGTCCCTGCCAGTGTTGTCATCCAGCCCATCTCAGGCCTGTCCTTACAGCCCACAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp AGACCTGGAACCGGAGATAGTCAGGGTAATTTCCTGTaGAGACCCCGAGGAAGACGTGGCAGTGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: RPGTGDSQGNFL*RPRGRRGSGPS
Trigger: GCTGGGCCCACTGCCACGTCTTCCTCGGGGTCTCCACAGGAAATTACCCTGACTATCTCCGGTTCCAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS CAA 72 bp TGTTCCTTCAGCTCCGAGGAGGTCTCGAACTCTTTCTaGCAGGCCTTGCAGGCATGCTGCCGGGTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: CSFSSEEVSNSF*QALQACCRVPA
Trigger: GGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGACCTCCTCGGAGCTGAAGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS CAA 90 bp GTCTTCATGTGTTCCTTCAGCTCCGAGGAGGTCTCGAACTCTTTCTaGCAGGCCTTGCAGGCATGCTGCCGGGTTCCAGCCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VFMCSFSSEEVSNSF*QALQACCRVPASSW
Trigger: CCAGGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGTTCGAGACCTCCTCGGAGCTGAAGGAACACATGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS CAA 90 bp TTCATGCAGTACTGGCACTTGAACGCCTTGATGCCGGTGTGCGTCTaGATGTGCGCTGTCAGCGTGCTCTTCACGGCGAAGGCGCGGAAG +
Preference number: 6 (lower is better)
Translates to: FMQYWHLNALMPVCV*MCAVSVLFTAKARK
Trigger: CTTCCGCGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCATGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS TCA 72 bp GCAGCCAACATCTCTCCAGCAGCCCACAAAGGCCCATaGGGTGTGCGAAAGCTCGCTGAAACGCCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: AANISPAAHKGP*GVRKLAETPVG
Trigger: ACCAACAGGCGTTTCAGCGAGCTTTCGCACACCTCATGGGCCTTTGTGGGCTGCTGGAGAGATGTTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS GCA 72 bp GCTCTGCTGGTCTACAGTGCTGTCATCTATCGAGGCTaGCTGCTGATGCTGTTGGAGCTGCTGGGCAAGCTC +
Preference number: 6 (lower is better)
Translates to: ALLVYSAVIYRG*LLMLLELLGKL
Trigger: GAGCTTGCCCAGCAGCTCCAACAGCATCAGCAGGCAGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp TGGGTCCCACTGCTGTTAGTGGTCAGCACTGAATCCTaGTCAGACAGCGGGCCTATGGTCAGGTTCGCAGAG +
Preference number: 6 (lower is better)
Translates to: WVPLLLVVSTES*SDSGPMVRFAE
Trigger: CTCTGCGAACCTGACCATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAACAGCAGTGGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp GCAGCTCGTCGCTCTCGATCTCCACCTGCATTTGAGTaGAGGCCTGCATGCTCTGCTGGTCTACAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: AARRSRSPPAFE*RPACSAGLQCC
Trigger: ACAGCACTGTAGACCAGCAGAGCATGCAGGCCTCCACTCAAATGCAGGTGGAGATCGAGAGCGACGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp TGGGAGCCTGCAGCAAGCTCTGCTGGTGGAAGCTTGTaGAGAGGGCCTGAGACTCAAGTGTGCTGGAATCCT +
Preference number: 6 (lower is better)
Translates to: WEPAASSAGGSL*RGPETQVCWNP
Trigger: AGGATTCCAGCACACTTGAGTCTCAGGCCCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp TACTGGCACTTGAACGCCTTGATGCCGGTGTGCGTCTaGATGTGCGCTGTCAGCGTGCTCTTCACGGCGAAG +
Preference number: 6 (lower is better)
Translates to: YWHLNALMPVCV*MCAVSVLFTAK
Trigger: CTTCGCCGTGAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCAGTA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS CAA 72 bp AGCTGGGAGCCTGCAGCAAGCTCTGCTGGTGGAAGCTaGTGGAGAGGGCCTGAGACTCAAGTGTGCTGGAAT +
Preference number: 6 (lower is better)
Translates to: SWEPAASSAGGS*WRGPETQVCWN
Trigger: ATTCCAGCACACTTGAGTCTCAGGCCCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGCTCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp CCAGAGGTGGAGAAGCTCTTCATGCAGTACTGGCACTTGAACGCCTaGATGCCGGTGTGCGTCTTGATGTGCGCTGTCAGCGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: PEVEKLFMQYWHLNA*MPVCVLMCAVSVLF
Trigger: GAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCATGAAGAGCTTCTCCACCTCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS CAA 90 bp GGCTTCATGCTCATATGTGTGGCCATGTGCCGGGTGAGGCTGCCATaGGTGGTGAAGGAAGCATTGCACACACTGCAGCTGAACGCCTTC +
Preference number: 6 (lower is better)
Translates to: GFMLICVAMCRVRLP*VVKEALHTLQLNAF
Trigger: GAAGGCGTTCAGCTGCAGTGTGTGCAATGCTTCCTTCACCACCAATGGCAGCCTCACCCGGCACATGGCCACACATATGAGCATGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp TGGATTCGAACATGCCTCACCAGGTCGCTAGGTTTCTTGAAGCTCTaGGGGCAGTATGTGCAGCAGTTGGCGTGCTTGGGCTCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: WIRTCLTRSLGFLKL*GQYVQQLACLGSSC
Trigger: GCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACCTAGCGACCTGGTGAGGCATGTTCGAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp GAGGTCTTGGGTCCCACTGCTGTTAGTGGTCAGCACTaGATCCTGCTCAGACAGCGGGCCTATGGTCAGGTT +
Preference number: 6 (lower is better)
Translates to: EVLGPTAVSGQH*ILLRQRAYGQV
Trigger: AACCTGACCATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAACAGCAGTGGGACCCAAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp CCGGAGGGGGACACTAGACCTTGCGAAGTCATCACTTaGGTGAGGTCTTGGGTCCCACTGCTGTTAGTGGTC +
Preference number: 6 (lower is better)
Translates to: PEGDTRPCEVIT*VRSWVPLLLVV
Trigger: GACCACTAACAGCAGTGGGACCCAAGACCTCACTCAAGTGATGACTTCGCAAGGTCTAGTGTCCCCCTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp ACATCTCTCCAGCAGCCCACAAAGGCCCATGAGGTGTaGGAAAGCTCGCTGAAACGCCTGTTGGTCACCAAC +
Preference number: 6 (lower is better)
Translates to: TSLQQPTKAHEV*ESSLKRLLVTN
Trigger: GTTGGTGACCAACAGGCGTTTCAGCGAGCTTTCGCACACCTCATGGGCCTTTGTGGGCTGCTGGAGAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS GCA 72 bp ATGCAGTACTGGCACTTGAACGCCTTGATGCCGGTGTaGGTCTTGATGTGCGCTGTCAGCGTGCTCTTCACG +
Preference number: 6 (lower is better)
Translates to: MQYWHLNALMPV*VLMCAVSVLFT
Trigger: CGTGAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS GCA 72 bp AAACCTTGGGGTAGCCCTGCTGGTTCGAAGGACTGTTaGGCAGGGCTCTGCTCTTCAAACTGGTCTACGTGC +
Preference number: 6 (lower is better)
Translates to: KPWGSPAGSKDC*AGLCSSNWSTC
Trigger: GCACGTAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACCAGCAGGGCTACCCCAAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp AGGCTGCCAGAGGTGGAGAAGCTCTTCATGCAGTACTaGCACTTGAACGCCTTGATGCCGGTGTGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: RLPEVEKLFMQY*HLNALMPVCVL
Trigger: CAAGACGCACACCGGCATCAAGGCGTTCAAGTGCCAGTACTGCATGAAGAGCTTCTCCACCTCTGGCAGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000583488.1
CDS CCA 72 bp CAGCTGAACGCCTTCACTCCTGTGTGTGTCTTCTCGTaGGACTTGAGGACCCCAGAGGAAACAAAGCCGCGT +
Preference number: 6 (lower is better)
Translates to: QLNAFTPVCVFS*DLRTPEETKPR
Trigger: ACGCGGCTTTGTTTCCTCTGGGGTCCTCAAGTCCCACGAGAAGACACACACAGGAGTGAAGGCGTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp AAGTTCTTGACCGGAGATAGTCAGGGTAATTTCCTGTaGAGACCCCGAGGAAGACGTGGCAGTGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: KFLTGDSQGNFL*RPRGRRGSGPS
Trigger: GCTGGGCCCACTGCCACGTCTTCCTCGGGGTCTCCACAGGAAATTACCCTGACTATCTCCGGTCAAGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645888.1
CDS GCA 72 bp CGAGTTGTTACATTCATCCCATCAGAGCTGGGAGCCTaGAGCAAGCTCTGCTGGTGGAAGCTTGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RVVTFIPSELGA*SKLCWWKLVER
Trigger: CCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGCTCCCAGCTCTGATGGGATGAATGTAACAACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp TCCACAGATCCACACTCCTGGGGTCCCACACTGTGCTaGACAGACCTGGAACCGGAGATAGTCAGGGTAATT +
Preference number: 6 (lower is better)
Translates to: STDPHSWGPTLC*TDLEPEIVRVI
Trigger: AATTACCCTGACTATCTCCGGTTCCAGGTCTGTGCAGCACAGTGTGGGACCCCAGGAGTGTGGATCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS CCA 72 bp CTGCGTCTGTGGGGTCCGTCTGCTCATTTGAAACGCTaGAAACATCTGGGTTTTGAGCGTGTGGTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LRLWGPSAHLKR*KHLGFERVVQR
Trigger: CCTCTGCACCACACGCTCAAAACCCAGATGTTTCCAGCGTTTCAAATGAGCAGACGGACCCCACAGACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583488.1
CDS CCA 72 bp AGTGTTAAGTTCGGAGATAGTCAGGGTAATTTCCTGTaGAGACCCCGAGGAAGACGTGGCAGTGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SVKFGDSQGNFL*RPRGRRGSGPS
Trigger: GCTGGGCCCACTGCCACGTCTTCCTCGGGGTCTCCACAGGAAATTACCCTGACTATCTCCGAACTTAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000320610.14
CDS CCA 72 bp TTCTCCAAATACAATGCCTCCACAGATCCACACTCCTaGGGTCCCACACTGTGCTGCACAGACCTGGAACCG +
Preference number: 6 (lower is better)
Translates to: FSKYNASTDPHS*GPTLCCTDLEP
Trigger: CGGTTCCAGGTCTGTGCAGCACAGTGTGGGACCCCAGGAGTGTGGATCTGTGGAGGCATTGTATTTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS GCA 72 bp TTTGAGTGGAGGCCTGCATGCTCTGCTGGTCTACAGTaGTGTCATCTATCGAGGCTGCCTGCTGATGCTGTT +
Preference number: 6 (lower is better)
Translates to: FEWRPACSAGLQ*CHLSRLPADAV
Trigger: AACAGCATCAGCAGGCAGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGCAGGCCTCCACTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp TCTCGATCTCCACCTGCATTTGAGTGGAGGCCTGCATaGTCTGCTGGTCTACAGTGCTGTCATCTATCGAGG +
Preference number: 6 (lower is better)
Translates to: SRSPPAFEWRPA*SAGLQCCHLSR
Trigger: CCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGCAGGCCTCCACTCAAATGCAGGTGGAGATCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp TGGATTCGAACATGCCTCACCAGGTCGCTAGGTTTCTaGAAGCTCTTGGGGCAGTATGTGCAGCAGTTGGCG +
Preference number: 6 (lower is better)
Translates to: WIRTCLTRSLGF*KLLGQYVQQLA
Trigger: CGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACCTAGCGACCTGGTGAGGCATGTTCGAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp GGAGTTGAGGAGGTTTACAGGCTGCAGTCCTTCCGATaGGCTTCGAGTCATAGGCTTTCTGGCCTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: GVEEVYRLQSFR*ASSHRLSGLLW
Trigger: CCAAAGAAGGCCAGAAAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCTCAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS GCA 72 bp TCCGCATTCAATGTTAAAACTCCATCTGGGTCATGGTaGAGCCAACATCTCTCCAGCAGCCCACAAAGGCCC +
Preference number: 6 (lower is better)
Translates to: SAFNVKTPSGSW*SQHLSSSPQRP
Trigger: GGGCCTTTGTGGGCTGCTGGAGAGATGTTGGCTGCACCATGACCCAGATGGAGTTTTAACATTGAATGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS GCA 72 bp GGGTCAGTAGAGGAGGAGTTGAGGAGGTTTACAGGCTaGAGTCCTTCCGATGAGCTTCGAGTCATAGGCTTT +
Preference number: 6 (lower is better)
Translates to: GSVEEELRRFTG*SPSDELRVIGF
Trigger: AAAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCTCAACTCCTCCTCTACTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp CTGGTCTACAGTGCTGTCATCTATCGAGGCTGCCTGCTGATGCTGTaGGAGCTGCTGGGCAAGCTCATATCTGTGGGTTTTCATGTGCTT +
Preference number: 6 (lower is better)
Translates to: LVYSAVIYRGCLLML*ELLGKLISVGFHVL
Trigger: AAGCACATGAAAACCCACAGATATGAGCTTGCCCAGCAGCTCCAACAGCATCAGCAGGCAGCCTCGATAGATGACAGCACTGTAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp CTGAGTCGAGATGGCCGATGGAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGTAGTGTTAAGTTCGGA +
Preference number: 6 (lower is better)
Translates to: LSRDGRWRHRCC*RKASACSVKFG
Trigger: TCCGAACTTAACACTACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCTCCATCGGCCATCTCGACTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000320610.14
CDS GCA 72 bp CCTGCAAAGGAATATCAGGGACTGGAATATTCGTCTTaGCAACACGGACCTTTGCAGGTTTACGCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: PAKEYQGLEYSS*QHGPLQVYAGA
Trigger: GGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp ACATTTGGTCCAACCAAGTTAGCAGCCAACTGTAACTaGATGCCTTCTAGGGTAGCCAGGCTCCCATCTGTC +
Preference number: 6 (lower is better)
Translates to: TFGPTKLAANCN*MPSRVARLPSV
Trigger: GACAGATGGGAGCCTGGCTACCCTAGAAGGCATCCAGTTACAGTTGGCTGCTAACTTGGTTGGACCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp TTTCTTGCTCTGCGTCTGTGGGGTCCGTCTGCTCATTaGAAACGCTGGAAACATCTGGGTTTTGAGCGTGTG +
Preference number: 6 (lower is better)
Translates to: FLALRLWGPSAH*KRWKHLGFERV
Trigger: CACACGCTCAAAACCCAGATGTTTCCAGCGTTTCAAATGAGCAGACGGACCCCACAGACGCAGAGCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583488.1
CDS TCA 72 bp TGTGCCTGCAGGTCCAGTTCCTCTTGGGATGACTCCTaGATCAAGCGAGTTGTTACATTCATCCCATCAGAG +
Preference number: 6 (lower is better)
Translates to: CACRSSSSWDDS*IKRVVTFIPSE
Trigger: CTCTGATGGGATGAATGTAACAACTCGCTTGATTCAGGAGTCATCCCAAGAGGAACTGGACCTGCAGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp TTCTCCGCATTCAATGTTAAAACTCCATCTGGGTCATaGTGCAGCCAACATCTCTCCAGCAGCCCACAAAGG +
Preference number: 6 (lower is better)
Translates to: FSAFNVKTPSGS*CSQHLSSSPQR
Trigger: CCTTTGTGGGCTGCTGGAGAGATGTTGGCTGCACCATGACCCAGATGGAGTTTTAACATTGAATGCGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS CAA 72 bp ATATGCGCTTTGAGACTAGCCACTCTGGAGAATTTCTaGTTACACACAGGGCAGGTAGGATCTTCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: ICALRLATLENF*LHTGQVGSSPL
Trigger: CAGCGGGGAAGATCCTACCTGCCCTGTGTGTAACAAGAAATTCTCCAGAGTGGCTAGTCTCAAAGCGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS CAA 72 bp TCCTGCAAAGGAATATCAGGGACTGGAATATTCGTCTaGCCAACACGGACCTTTGCAGGTTTACGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SCKGISGTGIFV*PTRTFAGLRWC
Trigger: GCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp TGTAGCATAATATGCGCTTTGAGACTAGCCACTCTGGAGAATTTCTaGTTACACACAGGGCAGGTAGGATCTTCCCCGCTGTGGGTGCAT +
Preference number: 6 (lower is better)
Translates to: CSIICALRLATLENF*LHTGQVGSSPLWVH
Trigger: ATGCACCCACAGCGGGGAAGATCCTACCTGCCCTGTGTGTAACAAGAAATTCTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS CAA 90 bp ACAGAGTTGTTCATGATAAACACGTTTGGGTCAGTAGAGGAGGAGTaGAGGAGGTTTACAGGCTGCAGTCCTTCCGATGAGCTTCGAGTC +
Preference number: 6 (lower is better)
Translates to: TELFMINTFGSVEEE*RRFTGCSPSDELRV
Trigger: GACTCGAAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCTCAACTCCTCCTCTACTGACCCAAACGTGTTTATCATGAACAACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp CTGAGTCGAGATGGCCGATGGAGACATCGGTGTTGTTaGAGGAAGGCTTCCGCTTGTAGTGTTAAGTTTTGT +
Preference number: 6 (lower is better)
Translates to: LSRDGRWRHRCC*RKASACSVKFC
Trigger: ACAAAACTTAACACTACAAGCGGAAGCCTTCCTTCAACAACACCGATGTCTCCATCGGCCATCTCGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543926.6
CDS CAA 72 bp TTCATGATAAACACGTTTGGGTCAGTAGAGGAGGAGTaGAGGAGGTTTACAGGCTGCAGTCCTTCCGATGAG +
Preference number: 6 (lower is better)
Translates to: FMINTFGSVEEE*RRFTGCSPSDE
Trigger: CTCATCGGAAGGACTGCAGCCTGTAAACCTCCTCAACTCCTCCTCTACTGACCCAAACGTGTTTATCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp AGGATTGGTTCCTGCAAAGGAATATCAGGGACTGGAATATTCGTCTaGCCAACACGGACCTTTGCAGGTTTACGCTGGTGCCTCATTTTC +
Preference number: 6 (lower is better)
Translates to: RIGSCKGISGTGIFV*PTRTFAGLRWCLIF
Trigger: GAAAATGAGGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGGAACCAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp TGTATCCTAATGTGTCGCGTTAACTGGCTTGGCTTTTaGAACGTCTTTCCACAGTGCGGACACGAATACGTG +
Preference number: 6 (lower is better)
Translates to: CILMCRVNWLGF*NVFPQCGHEYV
Trigger: CACGTATTCGTGTCCGCACTGTGGAAAGACGTTTCAAAAGCCAAGCCAGTTAACGCGACACATTAGGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS CCA 72 bp TATGAGGATTGGTTCCTGCAAAGGAATATCAGGGACTaGAATATTCGTCTTGCCAACACGGACCTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: YEDWFLQRNIRD*NIRLANTDLCR
Trigger: CCTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGGAACCAATCCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp CAGGGACTGGAATATTCGTCTTGCCAACACGGACCTTaGCAGGTTTACGCTGGTGCCTCATTTTCCTTAATT +
Preference number: 6 (lower is better)
Translates to: QGLEYSSCQHGP*QVYAGASFSLI
Trigger: AATTAAGGAAAATGAGGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 72 bp AAAGATTTCAGTCCTGTGTGTGTTCTGATGTGTGCTTaGAGCACGCCTGCAGAAACAAAGCCTCTTCCACAC +
Preference number: 6 (lower is better)
Translates to: KDFSPVCVLMCA*STPAETKPLPH
Trigger: GTGTGGAAGAGGCTTTGTTTCTGCAGGCGTGCTCAAAGCACACATCAGAACACACACAGGACTGAAATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp GTGGGTGCATTTATGAAGTGTCAGGTTGAATTCAACATTAAATGTTaGGGGGCACTGGTCACATCGATGTGGCTTGTCATTTCGCTCGTG +
Preference number: 6 (lower is better)
Translates to: VGAFMKCQVEFNIKC*GALVTSMWLVISLV
Trigger: CACGAGCGAAATGACAAGCCACATCGATGTGACCAGTGCCCCCAAACATTTAATGTTGAATTCAACCTGACACTTCATAAATGCACCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS CAA 90 bp CGTAAGCTGCCACCAGTAGTGAAAGCCCCATTACATATCAGACACTaGAAAGATTTCAGTCCTGTGTGTGTTCTGATGTGTGCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: RKLPPVVKAPLHIRH*KDFSPVCVLMCALS
Trigger: GCTCAAAGCACACATCAGAACACACACAGGACTGAAATCTTTCAAGTGTCTGATATGTAATGGGGCTTTCACTACTGGTGGCAGCTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp GGGCAGGTAGGATCTTCCCCGCTGTGGGTGCATTTATaGAGTGTCAGGTTGAATTCAACATTAAATGTTTGG +
Preference number: 6 (lower is better)
Translates to: GQVGSSPLWVHL*SVRLNSTLNVW
Trigger: CCAAACATTTAATGTTGAATTCAACCTGACACTTCATAAATGCACCCACAGCGGGGAAGATCCTACCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS CAA 90 bp AAGGAATATCAGGGACTGGAATATTCGTCTTGCCAACACGGACCTTaGCAGGTTTACGCTGGTGCCTCATTTTCCTTAATTCCGTATGTT +
Preference number: 6 (lower is better)
Translates to: KEYQGLEYSSCQHGP*QVYAGASFSLIPYV
Trigger: AACATACGGAATTAAGGAAAATGAGGCACCAGCGTAAACCTGCAAAGGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS TCA 72 bp TTTGAAACGTCTTTCCACAGTGCGGACACGAATACGTaGATCCACTTCTGTCGATATTCCGGTTATAAGACC +
Preference number: 6 (lower is better)
Translates to: FETSFHSADTNT*IHFCRYSGYKT
Trigger: GGTCTTATAACCGGAATATCGACAGAAGTGGATTCACGTATTCGTGTCCGCACTGTGGAAAGACGTTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS GCA 72 bp TCTGTAGAACTTGTTGAATTCTGTGGCCCACCCATATaGATCTTGCTGATATGCGTGTTTAAGCTGCCTAAA +
Preference number: 6 (lower is better)
Translates to: SVELVEFCGPPI*ILLICVFKLPK
Trigger: TTTAGGCAGCTTAAACACGCATATCAGCAAGATGCATATGGGTGGGCCACAGAATTCAACAAGTTCTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS GCA 72 bp TGGATGAGACCTAAGTCAGTTATGAGGATTGGTTCCTaGAAAGGAATATCAGGGACTGGAATATTCGTCTTG +
Preference number: 6 (lower is better)
Translates to: WMRPKSVMRIGS*KGISGTGIFVL
Trigger: CAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGGAACCAATCCTCATAACTGACTTAGGTCTCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CCA 72 bp GCTTCGAGTCATAGGCTTTCTGGCCTTCTTTGGGTCTaGTTTATAATGAAACTGCATGTGTGTCTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: ASSHRLSGLLWV*FIMKLHVCLSS
Trigger: AGAAGAAAGACACACATGCAGTTTCATTATAAACCAGACCCAAAGAAGGCCAGAAAGCCTATGACTCGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
CDS CAA 90 bp GAACAGATGAGATTCTCTTCCTTTTCATGTAGCATAATATGCGCTTaGAGACTAGCCACTCTGGAGAATTTCTTGTTACACACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: EQMRFSSFSCSIICA*RLATLENFLLHTGQ
Trigger: CTGCCCTGTGTGTAACAAGAAATTCTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCTACATGAAAAGGAAGAGAATCTCATCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1
CDS CAA 72 bp GAACTTGTTGAATTCTGTGGCCCACCCATATGCATCTaGCTGATATGCGTGTTTAAGCTGCCTAAACTTTTA +
Preference number: 6 (lower is better)
Translates to: ELVEFCGPPICI*LICVFKLPKLL
Trigger: TAAAAGTTTAGGCAGCTTAAACACGCATATCAGCAAGATGCATATGGGTGGGCCACAGAATTCAACAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS CAA 72 bp TTTATGAAGTGTCAGGTTGAATTCAACATTAAATGTTaGGGGGCACTGGTCACATCGATGTGGCTTGTCATT +
Preference number: 6 (lower is better)
Translates to: FMKCQVEFNIKC*GALVTSMWLVI
Trigger: AATGACAAGCCACATCGATGTGACCAGTGCCCCCAAACATTTAATGTTGAATTCAACCTGACACTTCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
CDS CAA 72 bp ATTCCTGGTTTGGTGTGGCCTATGAATAAGTTTACATaGATTCCTACCCATTACCTCTTTCTTCCTAAACAC +
Preference number: 6 (lower is better)
Translates to: IPGLVWPMNKFT*IPTHYLFLPKH
Trigger: GTGTTTAGGAAGAAAGAGGTAATGGGTAGGAATCAATGTAAACTTATTCATAGGCCACACCAAACCAGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253159.12
ENST00000543926.6
CDS CAA 72 bp AGATTCTCTTCCTTTTCATGTAGCATAATATGCGCTTaGAGACTAGCCACTCTGGAGAATTTCTTGTTACAC +
Preference number: 6 (lower is better)
Translates to: RFSSFSCSIICA*RLATLENFLLH
Trigger: GTGTAACAAGAAATTCTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCTACATGAAAAGGAAGAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253159.12
ENST00000320610.14
ENST00000543926.6
ENST00000579322.1
ENST00000583095.1