RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF232 (Homo sapiens)

Ensembl gene IDs: ENSG00000167840

Ensembl transcript IDs: ENST00000250076.7, ENST00000570486.5, ENST00000571076.1, ENST00000572468.1, ENST00000573015.5, ENST00000574735.1, ENST00000575538.1, ENST00000575898.5

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCTGGGCTaGTCCCAGAGATTCCTTCTTCTCCCATGGCTCTTCCTGTGCAGG +
Preference number: 1 (lower is better)
Translates to: LGLLRLELDAQCFLG*SQRFLLLPWLFLCR
Trigger: CCTGCACAGGAAGAGCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR GCA 90 bp TACCTGGCCCAAGAGAGGTTTGAACTTGGCACCTCCCCCTACAGCTaGCCCTCGGTCCAGCCTGAAGGTCATCAATCTGGCTCCCATAAC +
Preference number: 1 (lower is better)
Translates to: YLAQERFELGTSPYS*PSVQPEGHQSGSHN
Trigger: GTTATGGGAGCCAGATTGATGACCTTCAGGCTGGACCGAGGGGCAGCTGTAGGGGGAGGTGCCAAGTTCAAACCTCTCTTGGGCCAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR CCA 90 bp ACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTC +
Preference number: 1 (lower is better)
Translates to: TCSLFGKGWVSLGWS*MLSASWAAPRDSFF
Trigger: GAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR GCA 90 bp CAGGGCTCGAGGGCAGAAAAGACAGACACAGAAACACATACTAACTaGTCTACCTGGCCCAAGAGAGGTTTGAACTTGGCACCTCCCCCT +
Preference number: 1 (lower is better)
Translates to: QGSRAEKTDTETHTN*STWPKRGLNLAPPP
Trigger: AGGGGGAGGTGCCAAGTTCAAACCTCTCTTGGGCCAGGTAGAGCAGTTAGTATGTGTTTCTGTGTCTGTCTTTTCTGCCCTCGAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR GCA 90 bp TCCTGGGCAGGGGACCACCTCAGTCTCTCCGCTTTGGGATTTCTCTaGTGCAGTTCTAAGGTACCCTCAGAGGTAGCTTCAAATGTAGAG +
Preference number: 1 (lower is better)
Translates to: SWAGDHLSLSALGFL*CSSKVPSEVASNVE
Trigger: CTCTACATTTGAAGCTACCTCTGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAGGTGGTCCCCTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR CCA 90 bp AAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCC +
Preference number: 1 (lower is better)
Translates to: KYTCSLFGKGWVSLG*SWMLSASWAAPRDS
Trigger: GGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR GCA 90 bp TGGTCTTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTaGCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTCTCC +
Preference number: 1 (lower is better)
Translates to: WSFFPVGISLWMTTI*LKLSSWAGDHLSLS
Trigger: GGAGAGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR CCA 90 bp AGGGCAGAAAAGACAGACACAGAAACACATACTAACTGCTCTACCTaGCCCAAGAGAGGTTTGAACTTGGCACCTCCCCCTACAGCTGCC +
Preference number: 1 (lower is better)
Translates to: RAEKTDTETHTNCST*PKRGLNLAPPPTAA
Trigger: GGCAGCTGTAGGGGGAGGTGCCAAGTTCAAACCTCTCTTGGGCCAGGTAGAGCAGTTAGTATGTGTTTCTGTGTCTGTCTTTTCTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR GCA 90 bp AGGGCCAGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTAGTCTaGACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAG +
Preference number: 1 (lower is better)
Translates to: RARVSAAVSDTAILV*TSSAEGSYQLESCK
Trigger: CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR TCA 90 bp TCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTA +
Preference number: 1 (lower is better)
Translates to: SFGPIIIIFSCPCVP*RARVSAAVSDTAIL
Trigger: TAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR GCA 90 bp TTTCTTCAAATTACTAGTGTGGTTTCTGTCCCCTGCCTGGACACTTaGAGATGTGACCCTCCTTGGACCAAAGCTTCCAAGGAGACTTTA +
Preference number: 1 (lower is better)
Translates to: FLQITSVVSVPCLDT*RCDPPWTKASKETL
Trigger: TAAAGTCTCCTTGGAAGCTTTGGTCCAAGGAGGGTCACATCTGCAAGTGTCCAGGCAGGGGACAGAAACCACACTAGTAATTTGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR-3UTR CCA 90 bp TTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTCCATGTGCAGGGCCTaGGACCTGCGGCTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: FTLWERLGLLRLELDAQCSMCRA*DLRLWF
Trigger: GAACCAGAGCCGCAGGTCCCAGGCCCTGCACATGGA...GCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573015.5
3UTR-3UTR TCA 90 bp GATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTCCCCTCGGTCCAGCCTaGAGGTCATCAATCTGGCTC +
Preference number: 2 (lower is better)
Translates to: DDNHLPETFLLGRGPPQSPLGPA*RSSIWL
Trigger: GAGCCAGATTGATGACCTTCAGGCTGGACCGAGGGG...AGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR-3UTR GCA 90 bp CTGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCTGTGCAGGTCCATGTaGAGGGCCTGGGACAAGACT +
Preference number: 2 (lower is better)
Translates to: LELDAQCFLGCSQRFLLLLCRSM*RAWDKT
Trigger: AGTCTTGTCCCAGGCCCTGCACATGGACCTGCACAG...GAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575538.1
3UTR-3UTR CCA 90 bp TGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCAGAGTACTCGTAGTTaGCTCAAGGCCTCCCGGGGA +
Preference number: 2 (lower is better)
Translates to: WSWMLSASWAAPRDSFFSQSTRS*LKASRG
Trigger: TCCCCGGGAGGCCTTGAGCCAACTACGAGTACTCTG...GGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR TCA 90 bp GATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTGGTAGCGGAGATGCCTaGAGCGTTGGCGGAAGATCT +
Preference number: 2 (lower is better)
Translates to: DDNHLPETFLLGRGPPQSGSGDA*SVGGRS
Trigger: AGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACC...AGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR TCA 90 bp TTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCGGTAGCGGAGATGCCTaGAGCGTTGGCGGAAGATCT +
Preference number: 2 (lower is better)
Translates to: FTLWERLGLLRLELDAQCGSGDA*SVGGRS
Trigger: AGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACC...GCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR TCA 90 bp CTGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: LELDAQCFLGCSQRFLLLCPCVP*RARVSA
Trigger: AGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACA...GAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR-3UTR GCA 90 bp TTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCATCCCCCTTCCCACCTaGGGCTCTGGTTCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: FTLWERLGLLRLELDAQCIPLPT*GSGSSP
Trigger: AGGACTTGAACCAGAGCCGCAGGTGGGAAGGGGGAT...GCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR-3UTR TCA 90 bp CTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCTGGCGGAAGATCTCTTaGCTGGTAGAGTGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LFGKGWVSLGWSWMLSASWRKIS*LVEWFP
Trigger: TGGGAACCACTCTACCAGTCAAGAGATCTTCCGCCA...GGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR TCA 90 bp ACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: TCSLFGKGWVSLGWSWMLCPCVP*RARVSA
Trigger: AGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACA...GAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR-3UTR CCA 90 bp TGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCTCCATGTGCAGGGCCTaGGACAAGACTGTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: WSWMLSASWAAPRDSFFSSMCRA*DKTVPL
Trigger: AAGAGGAACAGTCTTGTCCCAGGCCCTGCACATGGA...GGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575538.1
3UTR-3UTR CCA 90 bp ACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCGGTTCCCAGGTAGCCTaGTCTCATACTCACAAGACT +
Preference number: 2 (lower is better)
Translates to: TCSLFGKGWVSLGWSWMLGSQVA*SHTHKT
Trigger: AGTCTTGTGAGTATGAGACCAGGCTACCTGGGAACC...GAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR GCA 90 bp TGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTACCAGCTGGAATCTTaGAAGGGCCCCAGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: WSHHHHLLLSLCTLKGQSYQLES*KGPSRG
Trigger: TCCTCTACTGGGGCCCTTGCAAGATTCCAGCTGGTA...ACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR-3UTR CCA 90 bp GACCAAATCCCCCTTCCCACCTGCGGCTCTGGTTCAAGTCCTTTCTCTAAATCCGGTTCCCAGGTAGCCTaGTCTCATACTCACAAGACT +
Preference number: 2 (lower is better)
Translates to: DQIPLPTCGSGSSPFSKSGSQVA*SHTHKT
Trigger: AGTCTTGTGAGTATGAGACCAGGCTACCTGGGAACC...GGATTTAGAGAAAGGACTTGAACCAGAGCCGCAGGTGGGAAGGGGGATTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR-3UTR TCA 90 bp TGGAGACGTTCTCCCCTTCAATTCAATGGGAAGGCTCTTTTCTGGCATGAACTCTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: WRRSPLQFNGKALFWHELCPCVP*RARVSA
Trigger: AGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACA...GAGTTCATGCCAGAAAAGAGCCTTCCCATTGAATTGAAGGGGAGAACGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573015.5
3UTR-3UTR CCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGAAGGCTCATACCAGCTaGAATCTTGCAAGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLKAHTS*NLARAP
Trigger: TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTT...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR CAA 90 bp TCCCAGGTAGCCTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTaGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAA +
Preference number: 2 (lower is better)
Translates to: SQVAWSHTHKTVPLP*VPSSSSSLVPVYPE
Trigger: TTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAGGCTACCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR TCA 90 bp TTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCGGACACTTGCAGATGTaGCCCTCCTTGGACCAAAGC +
Preference number: 2 (lower is better)
Translates to: FLPCGNFLMDDNHLPETFGHLQM*PSLDQS
Trigger: GCTTTGGTCCAAGGAGGGTCACATCTGCAAGTGTCC...GAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR-3UTR GCA 90 bp AATTTTCTTCAAATTACTAGTGTGGTTTCTGTCCCCTGCCTGGACACTTGCAGATACCAGCTGGAATCTTaGAAGGGCCCCAGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: NFLQITSVVSVPCLDTCRYQLES*KGPSRG
Trigger: TCCTCTACTGGGGCCCTTGCAAGATTCCAGCTGGTA...TCTGCAAGTGTCCAGGCAGGGGACAGAAACCACACTAGTAATTTGAAGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR-3UTR GCA 90 bp GTCTGGAGACGTTCTCCCCTTCAATTCAATGGGAAGGCTCTTTTCTGGCATGAATTGGGATTTCTCTGCTaGAGTTCTAAGGTACCCTCA +
Preference number: 2 (lower is better)
Translates to: VWRRSPLQFNGKALFWHELGFLC*SSKVPS
Trigger: TGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAA...TTCATGCCAGAAAAGAGCCTTCCCATTGAATTGAAGGGGAGAACGTCTCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573015.5
3UTR-3UTR GCA 90 bp ACAACTGACAGAAAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTACCAGCTGGAATCTTaGAAGGGCCCCAGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: TTDRKCKYTCSLFGKGWVYQLES*KGPSRG
Trigger: TCCTCTACTGGGGCCCTTGCAAGATTCCAGCTGGTA...GACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTTTCTGTCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR-3UTR CCA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTGGTTCCCAGGTAGCCTaGTCTCATACTCACAAGACT +
Preference number: 2 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSGSQVA*SHTHKT
Trigger: AGTCTTGTGAGTATGAGACCAGGCTACCTGGGAACC...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
3UTR-3UTR TCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTCTTCATCAGAGGACATaGAGGGATGATCTACAGGCA +
Preference number: 2 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTLHQRT*RDDLQA
Trigger: TGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAG...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
3UTR-3UTR TCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTGAGGACATGAAGGGATaGTCTACAGGCAGAACTAAG +
Preference number: 2 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLEDMKG*STGRTK
Trigger: CTTAGTTCTGCCTGTAGATCATCCCTTCATGTCCTC...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
3UTR CCA 72 bp CCTCCTGGGCAGGGGACCACCTCAGTCTCTCCGCTTTaGGATTTCTCTGCTGCAGTTCTAAGGTACCCTCAG +
Preference number: 3 (lower is better)
Translates to: PPGQGTTSVSPL*DFSAAVLRYPQ
Trigger: CTGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAGGTGGTCCCCTGCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR CAA 90 bp TGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTTTGGCGGAAGATCTCTaGACTGGTAGAGTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: WMTTICLKLSSWAGDHLSLAEDL*TGRVVP
Trigger: GGGAACCACTCTACCAGTCAAGAGATCTTCCGCCAA...ACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR CCA 72 bp TTATGGATGACAACCATCTGCCTGAAACTTTCCTCCTaGGCAGGGGACCACCTCAGTCTCTCCGCTTTGGGA +
Preference number: 3 (lower is better)
Translates to: LWMTTICLKLSS*AGDHLSLSALG
Trigger: TCCCAAAGCGGAGAGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR GCA 72 bp TTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTaGCTGAAACTTTCCTCCTGGGCAGGGGACCACCTC +
Preference number: 3 (lower is better)
Translates to: FPVGISLWMTTI*LKLSSWAGDHL
Trigger: GAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR CAA 90 bp TGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCTGGCCCAAGAGAGGTTaGAACTTGGCACCTCCCCCT +
Preference number: 3 (lower is better)
Translates to: CGNFLMDDNHLPETFLLGWPKRG*NLAPPP
Trigger: AGGGGGAGGTGCCAAGTTCAAACCTCTCTTGGGCCA...GCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR CCA 72 bp TGTGCAGGGCCTGGGACAAGACTGTTCCTCTTCCTTTaGTCCCATCATCATCATCTTCTCTTGTCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: CAGPGTRLFLFL*SHHHHLLLSLC
Trigger: ACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTCCCAGGCCCTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575538.1
3UTR TCA 72 bp TGTGCAGGTCCATGTGCAGGGCCTGGGACCTGGAGGTaGTCAGGCACCACTCAGTTTAAATTTTCTTCAAAT +
Preference number: 3 (lower is better)
Translates to: CAGPCAGPGTWR*SGTTQFKFSSN
Trigger: ATTTGAAGAAAATTTAAACTGAGTGGTGCCTGATCACCTCCAGGTCCCAGGCCCTGCACATGGACCTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR CCA 72 bp AAGACAGACACAGAAACACATACTAACTGCTCTACCTaGCCCAAGAGAGGTTTGAACTTGGCACCTCCCCCT +
Preference number: 3 (lower is better)
Translates to: KTDTETHTNCST*PKRGLNLAPPP
Trigger: AGGGGGAGGTGCCAAGTTCAAACCTCTCTTGGGCCAGGTAGAGCAGTTAGTATGTGTTTCTGTGTCTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
3UTR TCA 72 bp CCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCTGCTGTTAGTGATACA +
Preference number: 3 (lower is better)
Translates to: PIIIIFSCPCVP*RARVSAAVSDT
Trigger: TGTATCACTAACAGCAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR-3UTR CAA 90 bp GTCTTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTATACCTGTTCACTCTTaGGGAAAGGCTGGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: VFLPCGNFLMDDNHLPETIPVHS*GKAGSP
Trigger: AGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTAT...AGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR TCA 72 bp TCCCCTTCAATTCAATGGGAAGGCTCTTTTCTGGCATaGACTCTCCGATGTCTAATGAGCTCTGAGCACCAT +
Preference number: 3 (lower is better)
Translates to: SPSIQWEGSFLA*TLRCLMSSEHH
Trigger: ATGGTGCTCAGAGCTCATTAGACATCGGAGAGTTCATGCCAGAAAAGAGCCTTCCCATTGAATTGAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573015.5
3UTR CCA 72 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCT +
Preference number: 3 (lower is better)
Translates to: KCKYTCSLFGKG*VSLGWSWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR-3UTR CAA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGCATCATCATCTTCTCTaGTCCCTGTGTACCCTGAAG +
Preference number: 3 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWHHHLL*SLCTLK
Trigger: CTTCAGGGTACACAGGGACAAGAGAAGATGATGATG...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
3UTR CCA 72 bp CATTCATGGTCTTTCTTCCCTGTGGGAATTTCCTTATaGATGACAACCATCTGCCTGAAACTTTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: HSWSFFPVGISL*MTTICLKLSSW
Trigger: CCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGACCATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR-3UTR CAA 90 bp ACAACTGACAGAAAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCCATCATCATCTTCTCTaGTCCCTGTGTACCCTGAAG +
Preference number: 3 (lower is better)
Translates to: TTDRKCKYTCSLFGKGWVHHHLL*SLCTLK
Trigger: CTTCAGGGTACACAGGGACAAGAGAAGATGATGATG...GACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTTTCTGTCAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp GGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCCCCCAGGGGCAGGTTTaGGCCTGCGCAGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: GAGCSVLPGLLPEIPSSPPQGQV*ACAGRS
Trigger: GCTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGG...GGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp CTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCCGCCGCCTGCACGACTaGACTGGAGCGGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: LFGKGWVSLGWSWMLSASRRLHD*TGAAGC
Trigger: GCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCG...GGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR TCA 90 bp TTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTTCCATTGCCAGGGTaGGGGAGGCCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FTLWERLGLLRLELDAQCFPLPG*GRPPGG
Trigger: GCCCCCAGGTGGCCTCCCTCACCCTGGCAATGGAAA...GCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp TCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCAAAAGAGCGCGCCGCCTaGACGACTGGACTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SALALQKAHTSWNLARAPKERAA*TTGLER
Trigger: CCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTT...TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp CTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGGGGCAGGTTTGCGCCTaGGCAGGTCGCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LWSHHHHLLLSLCTLKGQGQVCA*AGRSLG
Trigger: GCCGAGGCTGCGACCTGCGCAGGCGCAAACCTGCCC...CTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp TGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTCCTGCACGACTGGACTaGAGCGGCCGGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WSHHHHLLLSLCTLKGQSPARLD*SGRVPW
Trigger: CCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGG...ACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp CTGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCTCCATGTGCAGGGCCTaGGACCTGCGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LELDAQCFLGCSQRFLLLSMCRA*DLRLWF
Trigger: GAACCAGAGCCGCAGGTCCCAGGCCCTGCACATGGA...GAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573015.5
CDS-3UTR GCA 90 bp TCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCAGTTCCATCGGGGCGCTaGCGCGAATCGCGCCACTTA +
Preference number: 4 (lower is better)
Translates to: SALALQKAHTSWNLARAPVPSGR*RESRHL
Trigger: TAAGTGGCGCGATTCGCGGCAGCGCCCCGATGGAAC...TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp GGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCCTGTGCAGGTCCATGTaGAGGGCCTGGGACAAGACT +
Preference number: 4 (lower is better)
Translates to: GAGCSVLPGLLPEIPSSPLCRSM*RAWDKT
Trigger: AGTCTTGTCCCAGGCCCTGCACATGGACCTGCACAG...GGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575538.1
CDS-3UTR TCA 90 bp TCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCAACCGGTTCCTGGACTTaGGCGGAGCGAGAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: SALALQKAHTSWNLARAPTGSWT*AERERA
Trigger: CGCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGT...TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp GATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCATGGCTCGCTGTTCGTTTCCATTaGCAGGGTGAGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DAQCFLGCSQRFLLLPWLAVRFH*QGEGGH
Trigger: GTGGCCTCCCTCACCCTGGCAATGGAAACGAACAGC...GAGCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp GGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GAGCSVLPGLLPEIPSSPWVSLG*SWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCA...GGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp CTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFGKGWVSLGWSWMLSASCPCVP*RARVSA
Trigger: AGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACA...GGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGTTTCCATTGCCAGGGTaGGGGAGGCCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKFPLPG*GRPPGG
Trigger: GCCCCCAGGTGGCCTCCCTCACCCTGGCAATGGAAA...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp ACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCGCTGTTCGTTTCCATTaGCAGGGTGAGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TCSLFGKGWVSLGWSWMLAVRFH*QGEGGH
Trigger: GTGGCCTCCCTCACCCTGGCAATGGAAACGAACAGC...GAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp TCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCACCCTGCCTGGACACTTaGAGATGTGACCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SALALQKAHTSWNLARAPPCLDT*RCDPPW
Trigger: CCAAGGAGGGTCACATCTGCAAGTGTCCAGGCAGGG...TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp GATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTCAGAGTACTCGTAGTTaGCTCAAGGCCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: DDNHLPETFLLGRGPPQSQSTRS*LKASRG
Trigger: TCCCCGGGAGGCCTTGAGCCAACTACGAGTACTCTG...AGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
3UTR CAA 72 bp TCCTCCTGGGCAGGGGACCACCTCAGTCTCTCCGCTTaGGGATTTCTCTGCTGCAGTTCTAAGGTACCCTCA +
Preference number: 4 (lower is better)
Translates to: SSWAGDHLSLSA*GFLCCSSKVPS
Trigger: TGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAGGTGGTCCCCTGCCCAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR TCA 90 bp GATTCCACTTCAGTAATGGGTGGTTGTGGCAATGATCCTTTGTCCTTGGGCTCTTTTCCATTGCCAGGGTaGGGGAGGCCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DSTSVMGGCGNDPLSLGSFPLPG*GRPPGG
Trigger: GCCCCCAGGTGGCCTCCCTCACCCTGGCAATGGAAA...AGAGCCCAAGGACAAAGGATCATTGCCACAACCACCCATTACTGAAGTGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp TCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCAGGACACTTGCAGATGTaGCCCTCCTTGGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: SALALQKAHTSWNLARAPGHLQM*PSLDQS
Trigger: GCTTTGGTCCAAGGAGGGTCACATCTGCAAGTGTCC...TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp TGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCATGGCCAGTGCTTCCTGGGCTaGTCCCAGAGATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WMLSASWAAPRDSFFSHGQCFLG*SQRFLL
Trigger: AAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTG...GCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGGCGCTGCCGAGAGGCTaGGAGCCCGGGAACCGGTTC +
Preference number: 4 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWALPRG*EPGNRF
Trigger: GAACCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGC...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp GATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DDNHLPETFLLGRGPPQSWVSLG*SWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCA...AGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp ACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCCTGAAACTTTCCTCCTaGGCAGGGGACCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: TCSLFGKGWVSLGWSWMLLKLSS*AGDHLS
Trigger: ACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAG...GAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp TGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCAAGGCTCATACCAGCTaGAATCTTGCAAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: WSWMLSASWAAPRDSFFSKAHTS*NLARAP
Trigger: TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTT...GGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp TTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTGGCGGAAGATCTCTTaGCTGGTAGAGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FTLWERLGLLRLELDAQCWRKIS*LVEWFP
Trigger: TGGGAACCACTCTACCAGTCAAGAGATCTTCCGCCA...GCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR TCA 90 bp TGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTCTCCACTCTTAGGGTaGTGTCCCCGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WSHHHHLLLSLCTLKGQSSPLLG*CPRTQD
Trigger: ATCCTGGGTGCGGGGACATCACCCTAAGAGTGGAGA...ACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR TCA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTTCCATTGCCAGGGTaGGGGAGGCCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIIFPLPG*GRPPGG
Trigger: GCCCCCAGGTGGCCTCCCTCACCCTGGCAATGGAAA...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR GCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGAGGCCCCTGGGAATTaGAGTCCTTGCGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKEAPGN*SPCAGG
Trigger: TCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTC...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp TGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCGCAGGGCCTGGGACCTaGGGCTCTGGTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CGNFLMDDNHLPETFLLGAGPGT*GSGSSP
Trigger: AGGACTTGAACCAGAGCCGCAGGTCCCAGGCCCTGC...GCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573015.5
CDS-3UTR GCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGCCATGGCTCTTCCTGTaGAGGTCCATGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKPWLFL*RSMCRA
Trigger: GGCCCTGCACATGGACCTGCACAGGAAGAGCCATGG...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGCCATGGCTCTTCCTGTaGAGGTCCATGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLPWLFL*RSMCRA
Trigger: GGCCCTGCACATGGACCTGCACAGGAAGAGCCATGG...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp TGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCAGTGCTTCCTGGGCTaGTCCCAGAGATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WMTTICLKLSSWAGDHLSQCFLG*SQRFLL
Trigger: AAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTG...ACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp GATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCATGGCTCTTCTGGCCTTGTCCATaGCCTGTGGTAACACTTCTC +
Preference number: 4 (lower is better)
Translates to: DAQCFLGCSQRFLLLPWLFWPCP*PVVTLL
Trigger: GAGAAGTGTTACCACAGGCCATGGACAAGGCCAGAA...GAGCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp CTGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCATGTCAGGGAAATTCTaGCCTTGTCCATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LELDAQCFLGCSQRFLLLMSGKF*PCPWPV
Trigger: CACAGGCCATGGACAAGGCCAGAATTTCCCTGACAT...GAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp TGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCTGCCCTGGAGGCCCCTaGGAATTGCAGTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: CGNFLMDDNHLPETFLLGCPGGP*ELQSLR
Trigger: GCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCA...GCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp TTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCTTTGGCCCAGGCGCGTaGGCGCTGCCGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLPCGNFLMDDNHLPETFFGPGA*ALPRGW
Trigger: CCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAA...GAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGTCCGTTCGCGGACTTTaGCCCAGGCGCGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWSVRGL*PRRVGA
Trigger: AGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGA...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp CTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCGGTTCCCAGGTAGCCTaGTCTCATACTCACAAGACT +
Preference number: 4 (lower is better)
Translates to: LFGKGWVSLGWSWMLSASGSQVA*SHTHKT
Trigger: AGTCTTGTGAGTATGAGACCAGGCTACCTGGGAACC...GGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp GTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCATGATCCTTTGTCCTTaGGCTCTGGGCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: VCTSSAEGSYQLESCKGPMILCP*ALGHLL
Trigger: CAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCAT...GGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp GGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCTGCTTTGTCTCTGGGTaGGTGGAGGAACGATTTCTA +
Preference number: 4 (lower is better)
Translates to: GAGCSVLPGLLPEIPSSPCFVSG*VEERFL
Trigger: TAGAAATCGTTCCTCCACCCACCCAGAGACAAAGCA...GGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp TTCCTGTGCAGGTCCATGTGCAGGGCCTGGGACAAGACTGTTCCTCTTCCTTTGAAGGCTCATACCAGCTaGAATCTTGCAAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLCRSMCRAWDKTVPLPLKAHTS*NLARAP
Trigger: TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTT...CAAAGGAAGAGGAACAGTCTTGTCCCAGGCCCTGCACATGGACCTGCACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575538.1
CDS-3UTR TCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGGGTAGCGGAGATGCCTaGAGCGTTGGCGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLGSGDA*SVGGRS
Trigger: AGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACC...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR TCA 90 bp CTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCGGCTCTTTTCTGGCATaGACTCTCCGATGTCTAATG +
Preference number: 4 (lower is better)
Translates to: LFGKGWVSLGWSWMLSASGSFLA*TLRCLM
Trigger: CATTAGACATCGGAGAGTTCATGCCAGAAAAGAGCC...GGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573015.5
CDS-3UTR TCA 90 bp TGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCCCCCTCGGTCCAGCCTaGAGGTCATCAATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CGNFLMDDNHLPETFLLGPLGPA*RSSIWL
Trigger: GAGCCAGATTGATGACCTTCAGGCTGGACCGAGGGG...GCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp TGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCATGGCGCTTTGGGATTTCTCTaGTGCAGTTCTAAGGTACCC +
Preference number: 4 (lower is better)
Translates to: WMLSASWAAPRDSFFSHGALGFL*CSSKVP
Trigger: GGGTACCTTAGAACTGCAGCAGAGAAATCCCAAAGC...GCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp TGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCATGGCCCTGGGGGCATATGTTaGTTTCTATCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WMLSASWAAPRDSFFSHGPGGIC*FLSCSS
Trigger: TGAGCTGCAAGATAGAAAGCAACATATGCCCCCAGG...GCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp CTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGGCTGTTCGTTTCCATTaGCAGGGTGAGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPLVPSSSSSLVPVYPEGAVRFH*QGEGGH
Trigger: GTGGCCTCCCTCACCCTGGCAATGGAAACGAACAGC...CCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp AATTTTCTTCAAATTACTAGTGTGGTTTCTGTCCCCTGCCTGGACACTTGCAGAAGCGGCCGGGTGCCCTaGAGGCCCCTGGGAATTGCA +
Preference number: 4 (lower is better)
Translates to: NFLQITSVVSVPCLDTCRSGRVP*RPLGIA
Trigger: TGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCT...TCTGCAAGTGTCCAGGCAGGGGACAGAAACCACACTAGTAATTTGAAGAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCGCCGCCTGCACGACTaGACTGGAGCGGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNRRLHD*TGAAGC
Trigger: GCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp TCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCAGGTTCCCAGGTAGCCTaGTCTCATACTCACAAGACT +
Preference number: 4 (lower is better)
Translates to: SALALQKAHTSWNLARAPGSQVA*SHTHKT
Trigger: AGTCTTGTGAGTATGAGACCAGGCTACCTGGGAACC...TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGCAGAGTACTCGTAGTTaGCTCAAGGCCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLQSTRS*LKASRG
Trigger: TCCCCGGGAGGCCTTGAGCCAACTACGAGTACTCTG...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp TCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGCTGATGCTCAGTGCTTCCTaGGCTGCTCCCAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: SSSSLVPVYPEGPEFQLLMLSAS*AAPRDS
Trigger: GGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCAT...CAGCAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp CTGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCTGCTTTGTCTCTGGGTaGGTGGAGGAACGATTTCTA +
Preference number: 4 (lower is better)
Translates to: LELDAQCFLGCSQRFLLLCFVSG*VEERFL
Trigger: TAGAAATCGTTCCTCCACCCACCCAGAGACAAAGCA...GAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp CTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPLVPSSSSSLVPVYPEGCPCVP*RARVSA
Trigger: AGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACA...CCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKCPCVP*RARVSA
Trigger: AGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACA...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp TGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCGGTAGCGGAGATGCCTaGAGCGTTGGCGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: CGNFLMDDNHLPETFLLGGSGDA*SVGGRS
Trigger: AGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACC...GCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACACTGGAGCGGCCGGGTaGCCTGGAGGCCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNTGAAG*PGGPWE
Trigger: TTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGGGCAGGTTTGCGCCTaGGCAGGTCGCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNGQVCA*AGRSLG
Trigger: GCCGAGGCTGCGACCTGCGCAGGCGCAAACCTGCCC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCCCCAGGGGCAGGTTTaGGCCTGCGCAGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNPQGQV*ACAGRS
Trigger: GCTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp TTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAGTAGAGGAAGAAGCAGGGCCTGGGACCTaGGGCTCTGGTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: FGPIIIIFSCPCVPVEEEAGPGT*GSGSSP
Trigger: AGGACTTGAACCAGAGCCGCAGGTCCCAGGCCCTGC...TTCTTCCTCTACTGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR GCA 90 bp TTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCCTGTGCAGGTCCATGTaGAGGGCCTGGGACCTGCGG +
Preference number: 4 (lower is better)
Translates to: FLPCGNFLMDDNHLPETFLCRSM*RAWDLR
Trigger: CCGCAGGTCCCAGGCCCTGCACATGGACCTGCACAG...GAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573015.5
CDS-3UTR GCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTCTGTGCAGGTCCATGTaGAGGGCCTGGGACCTGCGG +
Preference number: 4 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTLCRSM*RAWDLR
Trigger: CCGCAGGTCCCAGGCCCTGCACATGGACCTGCACAG...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR GCA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCCCATGGCTCTTCCTGTaGAGGTCCATGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIIPWLFL*RSMCRA
Trigger: GGCCCTGCACATGGACCTGCACAGGAAGAGCCATGG...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp GTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCTTGGGATTTCTCTGCTaGAGTTCTAAGGTACCCTCA +
Preference number: 4 (lower is better)
Translates to: VCTSSAEGSYQLESCKGPLGFLC*SSKVPS
Trigger: TGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAA...GGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp TGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCGGAAGAAGTCAAATATaGTTTGTCTCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WSWMLSASWAAPRDSFFSGRSQI*FVSGWV
Trigger: CACCCACCCAGAGACAAAGCATATTTGACTTCTTCC...GGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp GTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGGCCCCGAAACACATACTAACTaGTCTACCTGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VCTSSAEGSYQLESCKGPETHTN*STWPKR
Trigger: TCTCTTGGGCCAGGTAGAGCAGTTAGTATGTGTTTC...GGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCCTGCACGACTGGACTaGAGCGGCCGGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNPARLD*SGRVPW
Trigger: CCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGCGCTGCCGAGAGGCTaGGAGCCCGGGAACCGGTTC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNALPRG*EPGNRF
Trigger: GAACCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTTTGGCCCAGGCGCGTaGGCGCTGCCGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNFGPGA*ALPRGW
Trigger: CCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLSLGWS*MLSASW
Trigger: CCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGA...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp TTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FLWSHHHHLLLSLCTLKGLFGKG*VSLGWS
Trigger: GCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG...GCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTGTGGAATTGTACCTaGAGGGCGGTGCTGGCGGAC +
Preference number: 4 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIILWNCT*RAVLAD
Trigger: GTCCGCCAGCACCGCCCTTCAGGTACAATTCCACAA...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR TCA 90 bp GCCAGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTAGTCTGCACTAGCTCTTGGCGGAAGATCTCTTaGCTGGTAGAGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ARVSAAVSDTAILVCTSSWRKIS*LVEWFP
Trigger: TGGGAACCACTCTACCAGTCAAGAGATCTTCCGCCA...AGAGCTAGTGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR TCA 90 bp TGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCATCTCCACTCTTAGGGTaGTGTCCCCGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CSSSFGPIIIIFSCPCVPSPLLG*CPRTQD
Trigger: ATCCTGGGTGCGGGGACATCACCCTAAGAGTGGAGA...TGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAGAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR TCA 90 bp CTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCATGTCTAATGAGCTCTaGGCACCATCCATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LFGKGWVSLGWSWMLSASMSNEL*APSISF
Trigger: AAAGCTTATGGATGGTGCTCAGAGCTCATTAGACAT...GGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573015.5
CDS-3UTR GCA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGGTACCTGAAGGGCGGTaGTGGCGGACAGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWVPEGR*WRTDVR
Trigger: CCTGACATCTGTCCGCCAGCACCGCCCTTCAGGTAC...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp GACCAAATCCCCCTTCCCACCTGCGGCTCTGGTTCAAGTCCTTTCTCTAAATCCGCTTTGGGATTTCTCTaGTGCAGTTCTAAGGTACCC +
Preference number: 4 (lower is better)
Translates to: DQIPLPTCGSGSSPFSKSALGFL*CSSKVP
Trigger: GGGTACCTTAGAACTGCAGCAGAGAAATCCCAAAGC...GGATTTAGAGAAAGGACTTGAACCAGAGCCGCAGGTGGGAAGGGGGATTTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp TGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAGCTGTTCGTTTCCATTaGCAGGGTGAGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CSSSFGPIIIIFSCPCVPAVRFH*QGEGGH
Trigger: GTGGCCTCCCTCACCCTGGCAATGGAAACGAACAGC...TGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAGAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR GCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGTACCAGCTGGAATCTTaGAAGGGCCCCAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKYQLES*KGPSRG
Trigger: TCCTCTACTGGGGCCCTTGCAAGATTCCAGCTGGTA...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTCTGTGCAGGTCCATGTaGAGGGCCTGGGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSLCRSM*RAWDLE
Trigger: CTCCAGGTCCCAGGCCCTGCACATGGACCTGCACAG...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACAGCGGCCGGGTGCCCTaGAGGCCCCTGGGAATTGCA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNSGRVP*RPLGIA
Trigger: TGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTCCGTTCGCGGACTTTaGCCCAGGCGCGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNSVRGL*PRRVGA
Trigger: AGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp TGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCATGCTCAGTGCTTCCTaGGCTGCTCCCAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: CGNFLMDDNHLPETFLLGMLSAS*AAPRDS
Trigger: GGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCAT...GCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp TGTGATTCCACTTCAGTAATGGGTGGTTGTGGCAATGATCCTTTGTCCTTGGGCTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CDSTSVMGGCGNDPLSLGSLGWS*MLSASW
Trigger: CCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGA...GCCCAAGGACAAAGGATCATTGCCACAACCACCCATTACTGAAGTGGAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp ACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCGTGGGAATTTCCTTATaGATGACAACCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TCSLFGKGWVSLGWSWMLVGISL*MTTICL
Trigger: CAGGCAGATGGTTGTCATCCATAAGGAAATTCCCAC...GAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGAAGGCTCATACCAGCTaGAATCTTGCAAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKKAHTS*NLARAP
Trigger: TGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTT...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGTCCATGTGCAGGGCCTaGGACCTGGAGGTGATCAGG +
Preference number: 4 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWSMCRA*DLEVIR
Trigger: CCTGATCACCTCCAGGTCCCAGGCCCTGCACATGGA...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR TCA 90 bp GTCTTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTCTCCACTCTTAGGGTaGTGTCCCCGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VFLPCGNFLMDDNHLPETSPLLG*CPRTQD
Trigger: ATCCTGGGTGCGGGGACATCACCCTAAGAGTGGAGA...AGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR TCA 90 bp GATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTATGCTGACCGAGGTTTaGGCTCTGTTTGAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: DDNHLPETFLLGRGPPQSMLTEV*ALFESF
Trigger: AAAACTTTCAAACAGAGCTCAAACCTCGGTCAGCAT...AGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACAAAGAGCGCGCCGCCTaGACGACTGGACTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNKERAA*TTGLER
Trigger: CCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTGCAGGGCCTGGGACCTaGGGCTCTGGTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLAGPGT*GSGSSP
Trigger: AGGACTTGAACCAGAGCCGCAGGTCCCAGGCCCTGC...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCTGTGCAGGTCCATGTaGAGGGCCTGGGACCTGCGG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLCRSM*RAWDLR
Trigger: CCGCAGGTCCCAGGCCCTGCACATGGACCTGCACAG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp GATTCCACTTCAGTAATGGGTGGTTGTGGCAATGATCCTTTGTCCTTGGGCTCTCAGTGCTTCCTGGGCTaGTCCCAGAGATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: DSTSVMGGCGNDPLSLGSQCFLG*SQRFLL
Trigger: AAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTG...AGAGCCCAAGGACAAAGGATCATTGCCACAACCACCCATTACTGAAGTGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR GCA 90 bp GACCAAATCCCCCTTCCCACCTGCGGCTCTGGTTCAAGTCCTTTCTCTAAATCCTTGGGATTTCTCTGCTaGAGTTCTAAGGTACCCTCA +
Preference number: 4 (lower is better)
Translates to: DQIPLPTCGSGSSPFSKSLGFLC*SSKVPS
Trigger: TGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAA...GGATTTAGAGAAAGGACTTGAACCAGAGCCGCAGGTGGGAAGGGGGATTTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp GACCAAATCCCCCTTCCCACCTGCGGCTCTGGTTCAAGTCCTTTCTCTAAATCCGGAAGAAGTCAAATATaGTTTGTCTCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: DQIPLPTCGSGSSPFSKSGRSQI*FVSGWV
Trigger: CACCCACCCAGAGACAAAGCATATTTGACTTCTTCC...GGATTTAGAGAAAGGACTTGAACCAGAGCCGCAGGTGGGAAGGGGGATTTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR GCA 90 bp GATTCCACTTCAGTAATGGGTGGTTGTGGCAATGATCCTTTGTCCTTGGGCTCTTACCAGCTGGAATCTTaGAAGGGCCCCAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: DSTSVMGGCGNDPLSLGSYQLES*KGPSRG
Trigger: TCCTCTACTGGGGCCCTTGCAAGATTCCAGCTGGTA...AGAGCCCAAGGACAAAGGATCATTGCCACAACCACCCATTACTGAAGTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTTCCATGTGCAGGGCCTaGGACCTGCGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLSMCRA*DLRLWF
Trigger: GAACCAGAGCCGCAGGTCCCAGGCCCTGCACATGGA...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGATGATCCTTTGTCCTTaGGCTCTGGGCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKMILCP*ALGHLL
Trigger: CAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCAT...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp TGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTACTAACTGCTCTACCTaGCCCAAGAGAGGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: WSHHHHLLLSLCTLKGQSTNCST*PKRGLN
Trigger: GTTCAAACCTCTCTTGGGCCAGGTAGAGCAGTTAGT...ACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR TCA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTGGTAGCGGAGATGCCTaGAGCGTTGGCGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSGSGDA*SVGGRS
Trigger: AGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACC...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR TCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTGGTAGCGGAGATGCCTaGAGCGTTGGCGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTGSGDA*SVGGRS
Trigger: AGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACC...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR TCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTCTCCACTCTTAGGGTaGTGTCCCCGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTSPLLG*CPRTQD
Trigger: ATCCTGGGTGCGGGGACATCACCCTAAGAGTGGAGA...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGTTCCATCGGGGCGCTaGCGCGAATCGCGCCACTTA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNVPSGR*RESRHL
Trigger: TAAGTGGCGCGATTCGCGGCAGCGCCCCGATGGAAC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp CTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGAGGAACTCCAGGATCTaGTCCTTCGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPLVPSSSSSLVPVYPEGRNSRI*SFVCFS
Trigger: AGAGAAACACACGAAGGAGCAGATCCTGGAGTTCCT...CCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGCAGGGCCTGGGACCTaGGGCTCTGGTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNAGPGT*GSGSSP
Trigger: AGGACTTGAACCAGAGCCGCAGGTCCCAGGCCCTGC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGCCTGGGGGCATATGTTaGTTTCTATCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLPGGIC*FLSCSS
Trigger: TGAGCTGCAAGATAGAAAGCAACATATGCCCCCAGG...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTGCCCTGGAGGCCCCTaGGAATTGCAGTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNCPGGP*ELQSLR
Trigger: GCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTCAGAGTACTCGTAGTTaGCTCAAGGCCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSQSTRS*LKASRG
Trigger: TCCCCGGGAGGCCTTGAGCCAACTACGAGTACTCTG...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR CCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTCAGAGTACTCGTAGTTaGCTCAAGGCCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTQSTRS*LKASRG
Trigger: TCCCCGGGAGGCCTTGAGCCAACTACGAGTACTCTG...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTCCATGTGCAGGGCCTaGGACCTGCGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNSMCRA*DLRLWF
Trigger: GAACCAGAGCCGCAGGTCCCAGGCCCTGCACATGGA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGATGCTCAGTGCTTCCTaGGCTGCTCCCAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWMLSAS*AAPRDS
Trigger: GGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCAT...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWWVSLG*SWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCA...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGCTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWLFGKG*VSLGWS
Trigger: GCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGTACCTGTTCACTCTTTaGGAAAGGCTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLYLFTL*ERLGLL
Trigger: AAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTA...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp GCCAGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTAGTCTGCACTAGCTCTTTTGTCCTTGGGCTCTaGGCCATCTTCTGTAACAAC +
Preference number: 4 (lower is better)
Translates to: ARVSAAVSDTAILVCTSSFVLGL*AIFCNN
Trigger: GTTGTTACAGAAGATGGCCCAGAGCCCAAGGACAAA...AGAGCTAGTGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGTCAGTCTCTCCGCTTTaGGATTTCTCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLSVSPL*DFSAAV
Trigger: AACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGA...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGTCAGTCTCTCCGCTTTaGGATTTCTCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKSVSPL*DFSAAV
Trigger: AACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGA...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp GTCTTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTCTGAAACTTTCCTCCTaGGCAGGGGACCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: VFLPCGNFLMDDNHLPETLKLSS*AGDHLS
Trigger: ACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAG...AGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp CTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGGTGGGAATTTCCTTATaGATGACAACCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LWSHHHHLLLSLCTLKGQVGISL*MTTICL
Trigger: CAGGCAGATGGTTGTCATCCATAAGGAAATTCCCAC...CTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp CTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAATATGCTTTGTCTCTaGGTGGGTGGAGGAACGATT +
Preference number: 4 (lower is better)
Translates to: LWSHHHHLLLSLCTLKGQNMLCL*VGGGTI
Trigger: AATCGTTCCTCCACCCACCCAGAGACAAAGCATATT...CTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACACCGGTTCCTGGACTTaGGCGGAGCGAGAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNTGSWT*AERERA
Trigger: CGCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR TCA 90 bp TTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAGTAGAGGAAGAATGGCGGAAGATCTCTTaGCTGGTAGAGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FGPIIIIFSCPCVPVEEEWRKIS*LVEWFP
Trigger: TGGGAACCACTCTACCAGTCAAGAGATCTTCCGCCA...TTCTTCCTCTACTGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR TCA 90 bp CATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGCTGTATGCTGACCGAGGTTTaGGCTCTGTTTGAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: HHLLLSLCTLKGQSFSCCMLTEV*ALFESF
Trigger: AAAACTTTCAAACAGAGCTCAAACCTCGGTCAGCAT...ACAGCAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGTACCTGAAGGGCGGTaGTGGCGGACAGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNVPEGR*WRTDVR
Trigger: CCTGACATCTGTCCGCCAGCACCGCCCTTCAGGTAC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGAGGCCCCTGGGAATTaGAGTCCTTGCGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNEAPGN*SPCAGG
Trigger: TCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCCATGGCTCTTCCTGTaGAGGTCCATGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNPWLFL*RSMCRA
Trigger: GGCCCTGCACATGGACCTGCACAGGAAGAGCCATGG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp TGGAGACGTTCTCCCCTTCAATTCAATGGGAAGGCTCTTTTCTGGCATGAACTCCCTGGGGGCATATGTTaGTTTCTATCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WRRSPLQFNGKALFWHELPGGIC*FLSCSS
Trigger: TGAGCTGCAAGATAGAAAGCAACATATGCCCCCAGG...GAGTTCATGCCAGAAAAGAGCCTTCCCATTGAATTGAAGGGGAGAACGTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573015.5
CDS-3UTR GCA 90 bp ACAACTGACAGAAAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCATCCCCCTTCCCACCTaGGGCTCTGGTTCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TTDRKCKYTCSLFGKGWVIPLPT*GSGSSP
Trigger: AGGACTTGAACCAGAGCCGCAGGTGGGAAGGGGGAT...GACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTTTCTGTCAGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCCTGAAGGGCGGTGCTaGCGGACAGATGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNPEGRC*RTDVRE
Trigger: TTCCCTGACATCTGTCCGCCAGCACCGCCCTTCAGG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTWVSLG*SWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCA...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCATGATCCTTTGTCCTTaGGCTCTGGGCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIIMILCP*ALGHLL
Trigger: CAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCAT...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp AGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTAGTCTGCACTAGCTCTGCATGCTTTGTCTCTGGGTaGGTGGAGGAACGATTTCTA +
Preference number: 4 (lower is better)
Translates to: RVSAAVSDTAILVCTSSACFVSG*VEERFL
Trigger: TAGAAATCGTTCCTCCACCCACCCAGAGACAAAGCA...TGCAGAGCTAGTGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGAATATGCTTTGTCTCTaGGTGGGTGGAGGAACGATT +
Preference number: 4 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLNMLCL*VGGGTI
Trigger: AATCGTTCCTCCACCCACCCAGAGACAAAGCATATT...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTTGTGGAATTGTACCTaGAGGGCGGTGCTGGCGGAC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLWNCT*RAVLAD
Trigger: GTCCGCCAGCACCGCCCTTCAGGTACAATTCCACAA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGGTAGCGGAGATGCCTaGAGCGTTGGCGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNGSGDA*SVGGRS
Trigger: AGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTCTCCACTCTTAGGGTaGTGTCCCCGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNSPLLG*CPRTQD
Trigger: ATCCTGGGTGCGGGGACATCACCCTAAGAGTGGAGA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp TGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAAGGAACTCCAGGATCTaGTCCTTCGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CSSSFGPIIIIFSCPCVPRNSRI*SFVCFS
Trigger: AGAGAAACACACGAAGGAGCAGATCCTGGAGTTCCT...TGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAGAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR GCA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCCCTGGGGGCATATGTTaGTTTCTATCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIIPGGIC*FLSCSS
Trigger: TGAGCTGCAAGATAGAAAGCAACATATGCCCCCAGG...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR GCA 90 bp TGGAGACGTTCTCCCCTTCAATTCAATGGGAAGGCTCTTTTCTGGCATGAACTCGGAAGAAGTCAAATATaGTTTGTCTCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WRRSPLQFNGKALFWHELGRSQI*FVSGWV
Trigger: CACCCACCCAGAGACAAAGCATATTTGACTTCTTCC...GAGTTCATGCCAGAAAAGAGCCTTCCCATTGAATTGAAGGGGAGAACGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573015.5
CDS-3UTR CCA 90 bp TTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAGTAGAGGAAGAAGGTTCCCAGGTAGCCTaGTCTCATACTCACAAGACT +
Preference number: 4 (lower is better)
Translates to: FGPIIIIFSCPCVPVEEEGSQVA*SHTHKT
Trigger: AGTCTTGTGAGTATGAGACCAGGCTACCTGGGAACC...TTCTTCCTCTACTGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCAGAGTACTCGTAGTTaGCTCAAGGCCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNQSTRS*LKASRG
Trigger: TCCCCGGGAGGCCTTGAGCCAACTACGAGTACTCTG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ACAACTGACAGAAAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TTDRKCKYTCSLFGKGWVSLGWS*MLSASW
Trigger: CCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGA...GACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTTTCTGTCAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLSLGWS*MLSASW
Trigger: CCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGA...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTCTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLLFGKG*VSLGWS
Trigger: GCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTACCTGTTCACTCTTTaGGAAAGGCTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIIYLFTL*ERLGLL
Trigger: AAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTA...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTCTGAAACTTTCCTCCTaGGCAGGGGACCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLLKLSS*AGDHLS
Trigger: ACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAG...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTGCTTTGTCTCTGGGTaGGTGGAGGAACGATTTCTA +
Preference number: 4 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIICFVSG*VEERFL
Trigger: TAGAAATCGTTCCTCCACCCACCCAGAGACAAAGCA...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR TCA 90 bp CTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGGGTAACACTTCTCCATaGGTTCTATTTTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: LWSHHHHLLLSLCTLKGQGNTSP*VLFSNY
Trigger: GTAATTGGAAAATAGAACTCATGGAGAAGTGTTACC...CTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGCCCTTGTAAGCGGGTaGCTTCATCAAGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNALVSG*LHQVWG
Trigger: CCCCCAAACTTGATGAAGTCACCCGCTTACAAGGGC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTGTCCCTGTGTACCCTaGAGGGCCAGAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNCPCVP*RARVSA
Trigger: AGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTCAGTGCTTCCTGGGCTaGTCCCAGAGATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLQCFLG*SQRFLL
Trigger: AAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTG...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACAAGGCTCATACCAGCTaGAATCTTGCAAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNKAHTS*NLARAP
Trigger: GGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACATGCTCAGTGCTTCCTaGGCTGCTCCCAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNMLSAS*AAPRDS
Trigger: GGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCAT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNSLGWS*MLSASW
Trigger: CCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNWVSLG*SWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLFGKG*VSLGWS
Trigger: GCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp GTCTTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTTGTCCTTGGGCTCTaGGCCATCTTCTGTAACAAC +
Preference number: 4 (lower is better)
Translates to: VFLPCGNFLMDDNHLPETFVLGL*AIFCNN
Trigger: GTTGTTACAGAAGATGGCCCAGAGCCCAAGGACAAA...AGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCTGAAACTTTCCTCCTaGGCAGGGGACCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLKLSS*AGDHLS
Trigger: ACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ACAACTGACAGAAAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCATGTGCAGGGCCTaGGACAAGACTGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TTDRKCKYTCSLFGKGWVSMCRA*DKTVPL
Trigger: AAGAGGAACAGTCTTGTCCCAGGCCCTGCACATGGA...GACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTTTCTGTCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575538.1
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTGGCGGAAGATCTCTTaGCTGGTAGAGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNWRKIS*LVEWFP
Trigger: TGGGAACCACTCTACCAGTCAAGAGATCTTCCGCCA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp TTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCAGGAACTCCAGGATCTaGTCCTTCGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FLPCGNFLMDDNHLPETFRNSRI*SFVCFS
Trigger: AGAGAAACACACGAAGGAGCAGATCCTGGAGTTCCT...GAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCAGTGCTTCCTGGGCTaGTCCCAGAGATTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNQCFLG*SQRFLL
Trigger: AAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp TTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAGTAGAGGAAGAAGGAAGAAGTCAAATATaGTTTGTCTCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FGPIIIIFSCPCVPVEEEGRSQI*FVSGWV
Trigger: CACCCACCCAGAGACAAAGCATATTTGACTTCTTCC...TTCTTCCTCTACTGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR CCA 90 bp AATTTTCTTCAAATTACTAGTGTGGTTTCTGTCCCCTGCCTGGACACTTGCAGATACCTGTTCACTCTTTaGGAAAGGCTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NFLQITSVVSVPCLDTCRYLFTL*ERLGLL
Trigger: AAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTA...TCTGCAAGTGTCCAGGCAGGGGACAGAAACCACACTAGTAATTTGAAGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CCA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTTTTGTCCTTGGGCTCTaGGCCATCTTCTGTAACAAC +
Preference number: 4 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSFVLGL*AIFCNN
Trigger: GTTGTTACAGAAGATGGCCCAGAGCCCAAGGACAAA...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTATGATCCTTTGTCCTTaGGCTCTGGGCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLMILCP*ALGHLL
Trigger: CAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCAT...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR TCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTCTTCATCAGAGGACATaGAGGGATGATCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLLHQRT*RDDLQA
Trigger: TGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAG...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR GCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTAGGAACTCCAGGATCTaGTCCTTCGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLRNSRI*SFVCFS
Trigger: AGAGAAACACACGAAGGAGCAGATCCTGGAGTTCCT...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTTCTGGCCTTGTCCATaGCCTGTGGTAACACTTCTC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNFWPCP*PVVTLL
Trigger: GAGAAGTGTTACCACAGGCCATGGACAAGGCCAGAA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACATGTCAGGGAAATTCTaGCCTTGTCCATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNMSGKF*PCPWPV
Trigger: CACAGGCCATGGACAAGGCCAGAATTTCCCTGACAT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGGTTCCCAGGTAGCCTaGTCTCATACTCACAAGACT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNGSQVA*SHTHKT
Trigger: AGTCTTGTGAGTATGAGACCAGGCTACCTGGGAACC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTTTTGTCCTTGGGCTCTaGGCCATCTTCTGTAACAAC +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLFVLGL*AIFCNN
Trigger: GTTGTTACAGAAGATGGCCCAGAGCCCAAGGACAAA...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACATGATCCTTTGTCCTTaGGCTCTGGGCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNMILCP*ALGHLL
Trigger: CAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCAT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTAATATGCTTTGTCTCTaGGTGGGTGGAGGAACGATT +
Preference number: 4 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSNMLCL*VGGGTI
Trigger: AATCGTTCCTCCACCCACCCAGAGACAAAGCATATT...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR CCA 90 bp TTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCAATATGCTTTGTCTCTaGGTGGGTGGAGGAACGATT +
Preference number: 4 (lower is better)
Translates to: FLPCGNFLMDDNHLPETFNMLCL*VGGGTI
Trigger: AATCGTTCCTCCACCCACCCAGAGACAAAGCATATT...GAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR TCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTATGCTGACCGAGGTTTaGGCTCTGTTTGAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTMLTEV*ALFESF
Trigger: AAAACTTTCAAACAGAGCTCAAACCTCGGTCAGCAT...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR TCA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTATGTCTAATGAGCTCTaGGCACCATCCATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTMSNEL*APSISF
Trigger: AAAGCTTATGGATGGTGCTCAGAGCTCATTAGACAT...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGGCTCTTTTCTGGCATaGACTCTCCGATGTCTAATG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNGSFLA*TLRCLM
Trigger: CATTAGACATCGGAGAGTTCATGCCAGAAAAGAGCC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGAGGACATGAAGGGATaGTCTACAGGCAGAACTAAG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNEDMKG*STGRTK
Trigger: CTTAGTTCTGCCTGTAGATCATCCCTTCATGTCCTC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCTTCATCAGAGGACATaGAGGGATGATCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLHQRT*RDDLQA
Trigger: TGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACAGGAACTCCAGGATCTaGTCCTTCGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNRNSRI*SFVCFS
Trigger: AGAGAAACACACGAAGGAGCAGATCCTGGAGTTCCT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGCTTTGGGATTTCTCTaGTGCAGTTCTAAGGTACCC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNALGFL*CSSKVP
Trigger: GGGTACCTTAGAACTGCAGCAGAGAAATCCCAAAGC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTACCTGTTCACTCTTTaGGAAAGGCTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNYLFTL*ERLGLL
Trigger: AAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTTTGTCCTTGGGCTCTaGGCCATCTTCTGTAACAAC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNFVLGL*AIFCNN
Trigger: GTTGTTACAGAAGATGGCCCAGAGCCCAAGGACAAA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTCAGTCTCTCCGCTTTaGGATTTCTCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNSVSPL*DFSAAV
Trigger: AACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTGTGGGAATTTCCTTATaGATGACAACCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLVGISL*MTTICL
Trigger: CAGGCAGATGGTTGTCATCCATAAGGAAATTCCCAC...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTTGGGATTTCTCTGCTaGAGTTCTAAGGTACCCTCA +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLGFLC*SSKVPS
Trigger: TGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGTGGGAATTTCCTTATaGATGACAACCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNVGISL*MTTICL
Trigger: CAGGCAGATGGTTGTCATCCATAAGGAAATTCCCAC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTGTAACAACACTCTTTaGGAAAGGCTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNCNNTL*ERLGLL
Trigger: AAGGAGACCCAGCCTTTCCCAAAGAGTGTTGTTACA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACATGCTGACCGAGGTTTaGGCTCTGTTTGAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNMLTEV*ALFESF
Trigger: AAAACTTTCAAACAGAGCTCAAACCTCGGTCAGCAT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACATGTCTAATGAGCTCTaGGCACCATCCATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNMSNEL*APSISF
Trigger: AAAGCTTATGGATGGTGCTCAGAGCTCATTAGACAT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CCA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTAGAAGCAAAACAACTTaGCTACTACTTGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLRSKTT*LLLASK
Trigger: TTTGGATGCAAGTAGTAGCCAAGTTGTTTTGCTTCT...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR TCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGGTAACACTTCTCCATaGGTTCTATTTTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNGNTSP*VLFSNY
Trigger: GTAATTGGAAAATAGAACTCATGGAGAAGTGTTACC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR GCA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACAACTTGGCTACTACTTaGATCCAAAGCATCCTAATT +
Preference number: 4 (lower is better)
Translates to: INISIFIRGHEGMIYRQNNLATT*IQSILI
Trigger: AATTAGGATGCTTTGGATGCAAGTAGTAGCCAAGTT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS CCA 90 bp CCTCCTCGCCGCCGGCTTCCGTTCGCGGACTTTGGCCCAGGCGCGTaGGCGCTGCCGAGAGGCTGGGAGCCCGGGAACCGGTTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: PPRRRLPFADFGPGA*ALPRGWEPGNRFLD
Trigger: GTCCAGGAACCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAAGCCGGCGGCGAGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS GCA 90 bp GAACCGGTTCCTGGACTTGAGCGGAGCGAGAAAGAGCGCGCCGCCTaGACGACTGGACTGGAGCGGCCGGGTGCCCTGGAGGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: EPVPGLERSEKERAA*TTGLERPGALEAPG
Trigger: CCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 90 bp CAACTCCCAGAATCCTCCTCGCCGCCGGCTTCCGTTCGCGGACTTTaGCCCAGGCGCGTGGGCGCTGCCGAGAGGCTGGGAGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: QLPESSSPPASVRGL*PRRVGAAERLGARE
Trigger: TTCCCGGGCTCCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAAGCCGGCGGCGAGGAGGATTCTGGGAGTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS TCA 90 bp GGGCGCTGCCGAGAGGCTGGGAGCCCGGGAACCGGTTCCTGGACTTaGGCGGAGCGAGAAAGAGCGCGCCGCCTGCACGACTGGACTGGA +
Preference number: 5 (lower is better)
Translates to: GRCREAGSPGTGSWT*AERERARRLHDWTG
Trigger: TCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CCA 90 bp CCGTTCGCGGACTTTGGCCCAGGCGCGTGGGCGCTGCCGAGAGGCTaGGAGCCCGGGAACCGGTTCCTGGACTTGAGCGGAGCGAGAAAG +
Preference number: 5 (lower is better)
Translates to: PFADFGPGAWALPRG*EPGNRFLDLSGARK
Trigger: CTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS GCA 90 bp CGAGAAAGAGCGCGCCGCCTGCACGACTGGACTGGAGCGGCCGGGTaGCCTGGAGGCCCCTGGGAATTGCAGTCCTTGCGCAGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RERARRLHDWTGAAG*PGGPWELQSLRRWR
Trigger: TCTCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTTCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 90 bp AAGAGCGCGCCGCCTGCACGACTGGACTGGAGCGGCCGGGTGCCCTaGAGGCCCCTGGGAATTGCAGTCCTTGCGCAGGTGGAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: KSAPPARLDWSGRVP*RPLGIAVLAQVESE
Trigger: CTCACTCTCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS GCA 90 bp TGCCGCGAATCGCGCCACTTACAGCCCTCACCCCAGGGGCAGGTTTaGGCCTGCGCAGGTCGCAGCCTCGGCCTCCAACTCCCAGAATCC +
Preference number: 5 (lower is better)
Translates to: CRESRHLQPSPQGQV*ACAGRSLGLQLPES
Trigger: GGATTCTGGGAGTTGGAGGCCGAGGCTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGGTGAGGGCTGTAAGTGGCGCGATTCGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CCA 90 bp GACTTGAGCGGAGCGAGAAAGAGCGCGCCGCCTGCACGACTGGACTaGAGCGGCCGGGTGCCCTGGAGGCCCCTGGGAATTGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: DLSGARKSAPPARLD*SGRVPWRPLGIAVL
Trigger: AAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTTCTCGCTCCGCTCAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS GCA 90 bp GAATCGCGCCACTTACAGCCCTCACCCCAGGGGCAGGTTTGCGCCTaGGCAGGTCGCAGCCTCGGCCTCCAACTCCCAGAATCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ESRHLQPSPQGQVCA*AGRSLGLQLPESSS
Trigger: CGAGGAGGATTCTGGGAGTTGGAGGCCGAGGCTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGGTGAGGGCTGTAAGTGGCGCGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CCA 90 bp CGCCTGCACGACTGGACTGGAGCGGCCGGGTGCCCTGGAGGCCCCTaGGAATTGCAGTCCTTGCGCAGGTGGAGAGTGAGCCCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: RLHDWTGAAGCPGGP*ELQSLRRWRVSPCK
Trigger: CTTACAAGGGCTCACTCTCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 90 bp GCCGGGTGCCCTGGAGGCCCCTGGGAATTGCAGTCCTTGCGCAGGTaGAGAGTGAGCCCTTGTAAGCGGGTGACTTCATCAAGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: AGCPGGPWELQSLRR*RVSPCKRVTSSSLG
Trigger: CCCCAAACTTGATGAAGTCACCCGCTTACAAGGGCTCACTCTCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS-3UTR CAA 90 bp GATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTGGAGGCCCCTGGGAATaGCAGTCCTTGCGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: DDNHLPETFLLGRGPPQSGGPWE*QSLRRW
Trigger: CCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCC...AGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CAA 90 bp TTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCTTCCGTTCGCGGACTTaGGCCCAGGCGCGTGGGCGC +
Preference number: 5 (lower is better)
Translates to: FLWSHHHHLLLSLCTLKGFRSRT*AQARGR
Trigger: GCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAA...GCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CAA 90 bp CCCTACAGCTGCCCCTCGGTCCAGCCTGAAGGTCATCAATCTGGCTCCCATAACAGGGAAATTCTGGCCTaGTCCATGGCCTGTGGTAAC +
Preference number: 5 (lower is better)
Translates to: PYSCPSVQPEGHQSGSHNREILA*SMACGN
Trigger: GTTACCACAGGCCATGGACAAGGCCAGAATTTCCCT...GTTATGGGAGCCAGATTGATGACCTTCAGGCTGGACCGAGGGGCAGCTGTAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CAA 90 bp GGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCCTCAGTCTCTCCGCTTaGGGATTTCTCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GAGCSVLPGLLPEIPSSPLSLSA*GFLCCS
Trigger: ACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAG...GGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS CCA 90 bp AGTAAGGCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SKALFGKGWVSLGWS*MLSASWAAPRDSFF
Trigger: GAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGCCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572468.1
CDS-3UTR CAA 90 bp AAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGACCCCAGGGGCAGGTTaGCGCCTGCGCAGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: KCKYTCSLFGKGWVSLGWTPGAG*RLRRSQ
Trigger: CTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGGT...CCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CAA 90 bp GATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCATGGCTCCTCAGTCTCTCCGCTTaGGGATTTCTCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: DAQCFLGCSQRFLLLPWLLSLSA*GFLCCS
Trigger: ACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAG...GAGCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS CCA 90 bp AAGAATAGTAAGGCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCC +
Preference number: 5 (lower is better)
Translates to: KNSKALFGKGWVSLG*SWMLSASWAAPRDS
Trigger: GGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGCCTTACTATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572468.1
CDS CCA 90 bp GTAACAACACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTaGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VTTLFGKGWVSLGWS*MLSASWAAPRDSFF
Trigger: GAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGTTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS CCA 90 bp TCTTCTGTAACAACACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTaGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCC +
Preference number: 5 (lower is better)
Translates to: SSVTTLFGKGWVSLG*SWMLSASWAAPRDS
Trigger: GGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGTTGTTACAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CAA 90 bp GATGACAACCATCTGCCTGAAACTTTCCTCCTGGGCAGGGGACCACCTCAGTCTTTGGCGGAAGATCTCTaGACTGGTAGAGTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: DDNHLPETFLLGRGPPQSLAEDL*TGRVVP
Trigger: GGGAACCACTCTACCAGTCAAGAGATCTTCCGCCAA...AGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CAA 90 bp TGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCCCATGGCATACCTGTTCACTCTTaGGGAAAGGCTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: WMLSASWAAPRDSFFSHGIPVHS*GKAGSP
Trigger: AGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTAT...GCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp CTGGAGCTGGATGCTCAGTGCTTCCTGGGCTGCTCCCAGAGATTCCTTCTTCTCATACCTGTTCACTCTTaGGGAAAGGCTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LELDAQCFLGCSQRFLLLIPVHS*GKAGSP
Trigger: AGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTAT...GAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp CTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGAACCGGTTCCTGGACTaGAGCGGAGCGAGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LPLVPSSSSSLVPVYPEGNRFLD*SGARKS
Trigger: GCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTT...CCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CAA 90 bp TTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCGAAGTCAAATATGCTTaGTCTCTGGGTGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: FTLWERLGLLRLELDAQCEVKYA*SLGGWR
Trigger: CCTCCACCCACCCAGAGACAAAGCATATTTGACTTC...GCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS CCA 90 bp TTGTACCTGAAGGGCGGTGCTGGCGGACAGATGTCAGGGAAATTCTaGCCTTGTCCATGGCCTGTGGTAACACTTCTCCATGAGTTCTAT +
Preference number: 5 (lower is better)
Translates to: LYLKGGAGGQMSGKF*PCPWPVVTLLHEFY
Trigger: ATAGAACTCATGGAGAAGTGTTACCACAGGCCATGGACAAGGCCAGAATTTCCCTGACATCTGTCCGCCAGCACCGCCCTTCAGGTACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTTCCGTTCGCGGACTTaGGCCCAGGCGCGTGGGCGC +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNFRSRT*AQARGR
Trigger: GCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACACCCCAGGGGCAGGTTaGCGCCTGCGCAGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNTPGAG*RLRRSQ
Trigger: CTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGGT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp TTCACTCTTTGGGAAAGGCTGGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCCATCATCATCTTCTCTaGTCCCTGTGTACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: FTLWERLGLLRLELDAQCHHHLL*SLCTLK
Trigger: CTTCAGGGTACACAGGGACAAGAGAAGATGATGATG...GCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp TTCCTGTGCAGGTCCATGTGCAGGGCCTGGGACAAGACTGTTCCTCTTCCTTTGCATCATCATCTTCTCTaGTCCCTGTGTACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: FLCRSMCRAWDKTVPLPLHHHLL*SLCTLK
Trigger: CTTCAGGGTACACAGGGACAAGAGAAGATGATGATG...CAAAGGAAGAGGAACAGTCTTGTCCCAGGCCCTGCACATGGACCTGCACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575538.1
CDS CCA 90 bp GGCGGTGCTGGCGGACAGATGTCAGGGAAATTCTGGCCTTGTCCATaGCCTGTGGTAACACTTCTCCATGAGTTCTATTTTCCAATTACC +
Preference number: 5 (lower is better)
Translates to: GGAGGQMSGKFWPCP*PVVTLLHEFYFPIT
Trigger: GGTAATTGGAAAATAGAACTCATGGAGAAGTGTTACCACAGGCCATGGACAAGGCCAGAATTTCCCTGACATCTGTCCGCCAGCACCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 90 bp CCTGTTCTAAGAGATAAGAATAGTAAGGCACTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCTTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PVLRDKNSKALFGKG*VSLGWSWMLSASWA
Trigger: AGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGCCTTACTATTCTTATCTCTTAGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572468.1
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGGAGGCCCCTGGGAATaGCAGTCCTTGCGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNGGPWE*QSLRRW
Trigger: CCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp AGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTAGTCTGCACTAGCTCTGCATTGGCGGAAGATCTCTaGACTGGTAGAGTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: RVSAAVSDTAILVCTSSALAEDL*TGRVVP
Trigger: GGGAACCACTCTACCAGTCAAGAGATCTTCCGCCAA...TGCAGAGCTAGTGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CAA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGACCTGGGGGCATATGTaGCTTTCTATCTTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKTWGHM*LSILQL
Trigger: GAGCTGCAAGATAGAAAGCAACATATGCCCCCAGGT...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp GCCAGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTAGTCTGCACTAGCTCTGAAGTCAAATATGCTTaGTCTCTGGGTGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ARVSAAVSDTAILVCTSSEVKYA*SLGGWR
Trigger: CCTCCACCCACCCAGAGACAAAGCATATTTGACTTC...AGAGCTAGTGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp ATCCTAGTCTGCACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTGCAAGGAAGTCAAATATGCTTaGTCTCTGGGTGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ILVCTSSAEGSYQLESCKEVKYA*SLGGWR
Trigger: CCTCCACCCACCCAGAGACAAAGCATATTTGACTTC...CTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGTGCAGACTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp AGAGTTTCAGCTGCTGTTAGTGATACAGCCATCCTAGTCTGCACTAGCTCTGCAAAGAGAGGTTTGAACTaGGCACCTCCCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: RVSAAVSDTAILVCTSSAKRGLN*APPPTA
Trigger: AGCTGTAGGGGGAGGTGCCAAGTTCAAACCTCTCTT...TGCAGAGCTAGTGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CAA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTATACCAGCTGGAATCTaGCAAGGGCCCCCTCACAGG +
Preference number: 5 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTIPAGI*QGPPHR
Trigger: CCTGTGAGGGGGCCCTTGCAAGATTCCAGCTGGTAT...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CAA 90 bp TCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGCCAGAGTTTCAGCTGCATCATCATCTTCTCTaGTCCCTGTGTACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SSSSSLVPVYPEGPEFQLHHHLL*SLCTLK
Trigger: CTTCAGGGTACACAGGGACAAGAGAAGATGATGATG...CAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp CTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTGAAGGGATGTTGCTTTCTATCTaGCAGCTCACAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: LPLVPSSSSSLVPVYPEGMLLSI*QLTGPG
Trigger: TCCTGGTCCTGTGAGCTGCAAGATAGAAAGCAACAT...CCCTTCAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp TTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCTGGCCCAAGAGAGGTTaGAACTTGGCACCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: FLPCGNFLMDDNHLPETFWPKRG*NLAPPP
Trigger: AGGGGGAGGTGCCAAGTTCAAACCTCTCTTGGGCCA...GAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS TCA 90 bp AGGGAAATTCTGGCCTTGTCCATGGCCTGTGGTAACACTTCTCCATaGGTTCTATTTTCCAATTACCTCTTCCCAGACCTGATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: REILALSMACGNTSP*VLFSNYLFPDLMRG
Trigger: CCCTCTCATCAGGTCTGGGAAGAGGTAATTGGAAAATAGAACTCATGGAGAAGTGTTACCACAGGCCATGGACAAGGCCAGAATTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS-3UTR CAA 90 bp AATTTTCTTCAAATTACTAGTGTGGTTTCTGTCCCCTGCCTGGACACTTGCAGAGGGTCTCTTGTGGAATaGTACCTGAAGGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: NFLQITSVVSVPCLDTCRGSLVE*YLKGGA
Trigger: AGCACCGCCCTTCAGGTACAATTCCACAAGAGACCC...TCTGCAAGTGTCCAGGCAGGGGACAGAAACCACACTAGTAATTTGAAGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS-3UTR CAA 90 bp CTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCGAAGTCAAATATGCTTaGTCTCTGGGTGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LVSYSQDCSSSFGPIIIIEVKYA*SLGGWR
Trigger: CCTCCACCCACCCAGAGACAAAGCATATTTGACTTC...GATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTGGGAATTGCAGTCCTaGCGCAGGTGGAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNWELQS*RRWRVS
Trigger: GCTCACTCTCCACCTGCGCAAGGACTGCAATTCCCA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACAACCGGTTCCTGGACTaGAGCGGAGCGAGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNNRFLD*SGARKS
Trigger: GCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACATACCAGCTGGAATCTaGCAAGGGCCCCCTCACAGG +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNIPAGI*QGPPHR
Trigger: CCTGTGAGGGGGCCCTTGCAAGATTCCAGCTGGTAT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CAA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTTTGGCGGAAGATCTCTaGACTGGTAGAGTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSLAEDL*TGRVVP
Trigger: GGGAACCACTCTACCAGTCAAGAGATCTTCCGCCAA...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR CAA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTCTCAGTCTCTCCGCTTaGGGATTTCTCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTLSLSA*GFLCCS
Trigger: ACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAG...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CAA 90 bp TGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAATGTTGCTTTCTATCTaGCAGCTCACAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: CSSSFGPIIIIFSCPCVPMLLSI*QLTGPG
Trigger: TCCTGGTCCTGTGAGCTGCAAGATAGAAAGCAACAT...TGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAGAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR CAA 90 bp TTTGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCAGTAGAGGAAGAAACCTGGGGGCATATGTaGCTTTCTATCTTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: FGPIIIIFSCPCVPVEEETWGHM*LSILQL
Trigger: GAGCTGCAAGATAGAAAGCAACATATGCCCCCAGGT...TTCTTCCTCTACTGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571076.1
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACGGGTCTCTTGTGGAATaGTACCTGAAGGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNGSLVE*YLKGGA
Trigger: AGCACCGCCCTTCAGGTACAATTCCACAAGAGACCC...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTATACCTGTTCACTCTTaGGGAAAGGCTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSIPVHS*GKAGSP
Trigger: AGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTAT...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACAGGGAAATTCTGGCCTaGTCCATGGCCTGTGGTAAC +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNREILA*SMACGN
Trigger: GTTACCACAGGCCATGGACAAGGCCAGAATTTCCCT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACTTGGCGGAAGATCTCTaGACTGGTAGAGTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLAEDL*TGRVVP
Trigger: GGGAACCACTCTACCAGTCAAGAGATCTTCCGCCAA...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCTCAGTCTCTCCGCTTaGGGATTTCTCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNLSLSA*GFLCCS
Trigger: ACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CAA 90 bp TTTCTTCCCTGTGGGAATTTCCTTATGGATGACAACCATCTGCCTGAAACTTTCATGTTGCTTTCTATCTaGCAGCTCACAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: FLPCGNFLMDDNHLPETFMLLSI*QLTGPG
Trigger: TCCTGGTCCTGTGAGCTGCAAGATAGAAAGCAACAT...GAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570486.5
ENST00000573015.5
CDS-3UTR CAA 90 bp TCTCATACTCACAAGACTGTTCCTCTTCCTTTGGTCCCATCATCATCATCTTCTATGTTGCTTTCTATCTaGCAGCTCACAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: SHTHKTVPLPLVPSSSSSMLLSI*QLTGPG
Trigger: TCCTGGTCCTGTGAGCTGCAAGATAGAAAGCAACAT...AGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS-3UTR CAA 90 bp ACAACTGACAGAAAATGTAAATATACCTGTTCACTCTTTGGGAAAGGCTGGGTCACCTGGGGGCATATGTaGCTTTCTATCTTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: TTDRKCKYTCSLFGKGWVTWGHM*LSILQL
Trigger: GAGCTGCAAGATAGAAAGCAACATATGCCCCCAGGT...GACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTTTCTGTCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS-3UTR CAA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTCATCATCATCTTCTCTaGTCCCTGTGTACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLHHHLL*SLCTLK
Trigger: CTTCAGGGTACACAGGGACAAGAGAAGATGATGATG...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACATACCTGTTCACTCTTaGGGAAAGGCTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNIPVHS*GKAGSP
Trigger: AGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTAT...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250076.7
CDS-3UTR CAA 90 bp ATTAATATCAGTATCTTCATCAGAGGACATGAAGGGATGATCTACAGGCAGAACCATCATCATCTTCTCTaGTCCCTGTGTACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: INISIFIRGHEGMIYRQNHHHLL*SLCTLK
Trigger: CTTCAGGGTACACAGGGACAAGAGAAGATGATGATG...GTTCTGCCTGTAGATCATCCCTTCATGTCCTCTGATGAAGATACTGATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000575898.5
CDS-3UTR CAA 90 bp GACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTCAACTTGGCTACTACTaGCATCCAAAGCATCCTAAT +
Preference number: 5 (lower is better)
Translates to: DIIGGQTRQIMLERSKTTQLGYY*HPKHPN
Trigger: ATTAGGATGCTTTGGATGCAAGTAGTAGCCAAGTTG...AGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS-3UTR CAA 90 bp ACATTATTGGTGGGCAAACTAGGCAGATCATGCTGGAAAGAAGCAAAACAACTTAAGAAGCAAAACAACTaGGCTACTACTTGCATCCAA +
Preference number: 5 (lower is better)
Translates to: TLLVGKLGRSCWKEAKQLKKQNN*ATTCIQ
Trigger: TTGGATGCAAGTAGTAGCCAAGTTGTTTTGCTTCTT...AAGTTGTTTTGCTTCTTTCCAGCATGATCTGCCTAGTTTGCCCACCAATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS CCA 72 bp CGCCGGCTTCCGTTCGCGGACTTTGGCCCAGGCGCGTaGGCGCTGCCGAGAGGCTGGGAGCCCGGGAACCGG +
Preference number: 6 (lower is better)
Translates to: RRLPFADFGPGA*ALPRGWEPGNR
Trigger: CCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAAGCCGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CAA 90 bp CCAACTCCCAGAATCCTCCTCGCCGCCGGCTTCCGTTCGCGGACTTaGGCCCAGGCGCGTGGGCGCTGCCGAGAGGCTGGGAGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: PTPRILLAAGFRSRT*AQARGRCREAGSPG
Trigger: TCCCGGGCTCCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAAGCCGGCGGCGAGGAGGATTCTGGGAGTTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS GCA 72 bp TTCCGTTCGCGGACTTTGGCCCAGGCGCGTGGGCGCTaGCGAGAGGCTGGGAGCCCGGGAACCGGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: FRSRTLAQARGR*REAGSPGTGSW
Trigger: CCAGGAACCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CCA 72 bp GAATCCTCCTCGCCGCCGGCTTCCGTTCGCGGACTTTaGCCCAGGCGCGTGGGCGCTGCCGAGAGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: ESSSPPASVRGL*PRRVGAAERLG
Trigger: TCCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAAGCCGGCGGCGAGGAGGATTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CAA 72 bp AGAATCCTCCTCGCCGCCGGCTTCCGTTCGCGGACTTaGGCCCAGGCGCGTGGGCGCTGCCGAGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RILLAAGFRSRT*AQARGRCREAG
Trigger: CCCAGCCTCTCGGCAGCGCCCACGCGCCTGGGCCAAAGTCCGCGAACGGAAGCCGGCGGCGAGGAGGATTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS GCA 72 bp CCTGGACTTGAGCGGAGCGAGAAAGAGCGCGCCGCCTaGACGACTGGACTGGAGCGGCCGGGTGCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: PGLERSEKERAA*TTGLERPGALE
Trigger: CTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTTCTCGCTCCGCTCAAGTCCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 72 bp CCGCCTGCACGACTGGACTGGAGCGGCCGGGTGCCCTaGAGGCCCCTGGGAATTGCAGTCCTTGCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PPARLDWSGRVP*RPLGIAVLAQV
Trigger: CACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 72 bp GGAGCGAGAAAGAGCGCGCCGCCTGCACGACTGGACTaGAGCGGCCGGGTGCCCTGGAGGCCCCTGGGAATT +
Preference number: 6 (lower is better)
Translates to: GARKSAPPARLD*SGRVPWRPLGI
Trigger: AATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTGCAGGCGGCGCGCTCTTTCTCGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CAA 90 bp TGGGCGCTGCCGAGAGGCTGGGAGCCCGGGAACCGGTTCCTGGACTaGAGCGGAGCGAGAAAGAGCGCGCCGCCTGCACGACTGGACTGG +
Preference number: 6 (lower is better)
Translates to: WALPRGWEPGNRFLD*SGARKSAPPARLDW
Trigger: CCAGTCCAGTCGTGCAGGCGGCGCGCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTTCCCGGGCTCCCAGCCTCTCGGCAGCGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS TCA 72 bp CGAGAGGCTGGGAGCCCGGGAACCGGTTCCTGGACTTaGGCGGAGCGAGAAAGAGCGCGCCGCCTGCACGAC +
Preference number: 6 (lower is better)
Translates to: REAGSPGTGSWT*AERERARRLHD
Trigger: GTCGTGCAGGCGGCGCGCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTTCCCGGGCTCCCAGCCTCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS GCA 72 bp TCGCGCCACTTACAGCCCTCACCCCAGGGGCAGGTTTaGGCCTGCGCAGGTCGCAGCCTCGGCCTCCAACTC +
Preference number: 6 (lower is better)
Translates to: SRHLQPSPQGQV*ACAGRSLGLQL
Trigger: GAGTTGGAGGCCGAGGCTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGGTGAGGGCTGTAAGTGGCGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CAA 72 bp CCGAGAGGCTGGGAGCCCGGGAACCGGTTCCTGGACTaGAGCGGAGCGAGAAAGAGCGCGCCGCCTGCACGA +
Preference number: 6 (lower is better)
Translates to: PRGWEPGNRFLD*SGARKSAPPAR
Trigger: TCGTGCAGGCGGCGCGCTCTTTCTCGCTCCGCTCAAGTCCAGGAACCGGTTCCCGGGCTCCCAGCCTCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CAA 90 bp CTGCCGCGAATCGCGCCACTTACAGCCCTCACCCCAGGGGCAGGTTaGCGCCTGCGCAGGTCGCAGCCTCGGCCTCCAACTCCCAGAATC +
Preference number: 6 (lower is better)
Translates to: LPRIAPLTALTPGAG*RLRRSQPRPPTPRI
Trigger: GATTCTGGGAGTTGGAGGCCGAGGCTGCGACCTGCGCAGGCGCAAACCTGCCCCTGGGGTGAGGGCTGTAAGTGGCGCGATTCGCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250076.7
ENST00000570486.5
ENST00000574735.1
CDS CAA 90 bp CACGACTGGACTGGAGCGGCCGGGTGCCCTGGAGGCCCCTGGGAATaGCAGTCCTTGCGCAGGTGGAGAGTGAGCCCTTGTAAGCGGGTG +
Preference number: 6 (lower is better)
Translates to: HDWTGAAGCPGGPWE*QSLRRWRVSPCKRV
Trigger: CACCCGCTTACAAGGGCTCACTCTCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGTCCAGTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS GCA 72 bp TGCAGCTCACAGGACCAGGAGGTTCCATCGGGGCGCTaGCGCGAATCGCGCCACTTACAGCCCTCACCCCAG +
Preference number: 6 (lower is better)
Translates to: CSSQDQEVPSGR*RESRHLQPSPQ
Trigger: CTGGGGTGAGGGCTGTAAGTGGCGCGATTCGCGGCAGCGCCCCGATGGAACCTCCTGGTCCTGTGAGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570486.5
CDS GCA 72 bp GTACCCTCACAGGACCAGGAGGTTCCATCGGGGCGCTaGCGCGAATCGCGCCACTTACAGCCCTCACCCCAG +
Preference number: 6 (lower is better)
Translates to: VPSQDQEVPSGR*RESRHLQPSPQ
Trigger: CTGGGGTGAGGGCTGTAAGTGGCGCGATTCGCGGCAGCGCCCCGATGGAACCTCCTGGTCCTGTGAGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574735.1
CDS CAA 90 bp ACTGGAGCGGCCGGGTGCCCTGGAGGCCCCTGGGAATTGCAGTCCTaGCGCAGGTGGAGAGTGAGCCCTTGTAAGCGGGTGACTTCATCA +
Preference number: 6 (lower is better)
Translates to: TGAAGCPGGPWELQS*RRWRVSPCKRVTSS
Trigger: TGATGAAGTCACCCGCTTACAAGGGCTCACTCTCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGGGCACCCGGCCGCTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CAA 90 bp GCCAGGGTGAGGGAGGCCACCTGGGGGCATATGTTGCTTTCTATCTaGCAGCTCACAGGACCAGGAGGTTCCATCGGGGCGCTGCCGCGA +
Preference number: 6 (lower is better)
Translates to: ARVREATWGHMLLSI*QLTGPGGSIGALPR
Trigger: TCGCGGCAGCGCCCCGATGGAACCTCCTGGTCCTGTGAGCTGCAAGATAGAAAGCAACATATGCCCCCAGGTGGCCTCCCTCACCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS CCA 72 bp CCTGGAGGCCCCTGGGAATTGCAGTCCTTGCGCAGGTaGAGAGTGAGCCCTTGTAAGCGGGTGACTTCATCA +
Preference number: 6 (lower is better)
Translates to: PGGPWELQSLRR*RVSPCKRVTSS
Trigger: TGATGAAGTCACCCGCTTACAAGGGCTCACTCTCCACCTGCGCAAGGACTGCAATTCCCAGGGGCCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CAA 72 bp AGGGAGGCCACCTGGGGGCATATGTTGCTTTCTATCTaGCAGCTCACAGGACCAGGAGGTTCCATCGGGGCG +
Preference number: 6 (lower is better)
Translates to: REATWGHMLLSI*QLTGPGGSIGA
Trigger: CGCCCCGATGGAACCTCCTGGTCCTGTGAGCTGCAAGATAGAAAGCAACATATGCCCCCAGGTGGCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS CAA 90 bp TTCGTTTCCATTGCCAGGGTGAGGGAGGCCACCTGGGGGCATATGTaGCTTTCTATCTTGCAGCTCACAGGACCAGGAGGTTCCATCGGG +
Preference number: 6 (lower is better)
Translates to: FVSIARVREATWGHM*LSILQLTGPGGSIG
Trigger: CCCGATGGAACCTCCTGGTCCTGTGAGCTGCAAGATAGAAAGCAACATATGCCCCCAGGTGGCCTCCCTCACCCTGGCAATGGAAACGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
CDS CCA 72 bp GGGGTCTCTTGTGGAATTGTACCTGAAGGGCGGTGCTaGCGGACAGATGTCAGGGAAATTCTGGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: GVSCGIVPEGRC*RTDVREILALS
Trigger: GGACAAGGCCAGAATTTCCCTGACATCTGTCCGCCAGCACCGCCCTTCAGGTACAATTCCACAAGAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 72 bp AAGGGCGGTGCTGGCGGACAGATGTCAGGGAAATTCTaGCCTTGTCCATGGCCTGTGGTAACACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: KGGAGGQMSGKF*PCPWPVVTLLH
Trigger: ATGGAGAAGTGTTACCACAGGCCATGGACAAGGCCAGAATTTCCCTGACATCTGTCCGCCAGCACCGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 72 bp GGGCCATCTTCTGTAACAACACTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: GPSSVTTLFGKG*VSLGWSWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGTTGTTACAGAAGATGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575898.5
CDS CAA 72 bp TTTGTCTCTGGGTGGGTGGAGGAACGATTTCTAGTCTaGTCCGGTGAAGCTCGGCTGTTCGTTTCCATTGCC +
Preference number: 6 (lower is better)
Translates to: FVSGWVEERFLV*SGEARLFVSIA
Trigger: GGCAATGGAAACGAACAGCCGAGCTTCACCGGACAAGACTAGAAATCGTTCCTCCACCCACCCAGAGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570486.5
ENST00000571076.1
ENST00000573015.5
ENST00000575538.1
CDS CAA 90 bp TCCCAGGTAGCCTGGTCTCATACTCACAAGACTGTTCCTCTTCCTTaGGTCCCATCATCATCATCTTCTCTTGTCCCTGTGTACCCTCAC +
Preference number: 6 (lower is better)
Translates to: SQVAWSHTHKTVPLP*VPSSSSSLVPVYPH
Trigger: GTGAGGGTACACAGGGACAAGAGAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAGGCTACCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574735.1
CDS GCA 72 bp ACTAGCTCTGCAGAAGGCTCATACCAGCTGGAATCTTaGAAGGGCCCCAGTAGAGGAAGAAGTCAAATATGC +
Preference number: 6 (lower is better)
Translates to: TSSAEGSYQLES*KGPSRGRSQIC
Trigger: GCATATTTGACTTCTTCCTCTACTGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570486.5
ENST00000573015.5
ENST00000575538.1
CDS CCA 72 bp AGAGATAAGAATAGTAAGGCACTCTTTGGGAAAGGCTaGGTCTCCTTAGGCTGGAGCTGGATGCTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: RDKNSKALFGKG*VSLGWSWMLSA
Trigger: AGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGCCTTACTATTCTTATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572468.1
CDS TCA 72 bp CTGGCCTTGTCCATGGCCTGTGGTAACACTTCTCCATaGGTTCTATTTTCCAATTACCTCTTCCCAGACCTG +
Preference number: 6 (lower is better)
Translates to: LALSMACGNTSP*VLFSNYLFPDL
Trigger: CAGGTCTGGGAAGAGGTAATTGGAAAATAGAACTCATGGAGAAGTGTTACCACAGGCCATGGACAAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5
CDS CCA 72 bp GGCGGACAGATGTCAGGGAAATTCTGGCCTTGTCCATaGCCTGTGGTAACACTTCTCCATGAGTTCTATTTT +
Preference number: 6 (lower is better)
Translates to: GGQMSGKFWPCP*PVVTLLHEFYF
Trigger: AAAATAGAACTCATGGAGAAGTGTTACCACAGGCCATGGACAAGGCCAGAATTTCCCTGACATCTGTCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250076.7
ENST00000570486.5