Pregenerated sensors for ZNF230 (Homo sapiens)
Ensembl gene IDs: ENSG00000159882Ensembl transcript IDs: ENST00000429154.7, ENST00000585491.1, ENST00000585568.5, ENST00000585632.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAATCCCACTATTGAGTATATCCAAAGCAAAGGAAATCAGTATGTaGATCAGATATCTACACTACCATGTTCATTGGAGCACTATTCTT | + |
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Preference number: 1 (lower is better) Translates to: AIPLLSISKAKEISM*IRYLHYHVHWSTIL Trigger: AAGAATAGTGCTCCAATGAACATGGTAGTGTAGATATCTGATCCACATACTGATTTCCTTTGCTTTGGATATACTCAATAGTGGGATTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR CAA 90 bp | CAGGACCACCAGCCAGAAAGGGGTTGTAATAAACCAGGAAAGAGATaGGGCAATTTAGATCAGGGTGATATAAGTGGGCATGGTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QDHQPERGCNKPGKR*GNLDQGDISGHGQK Trigger: CTTCTGACCATGCCCACTTATATCACCCTGATCTAAATTGCCCAATCTCTTTCCTGGTTTATTACAACCCCTTTCTGGCTGGTGGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| 3UTR-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGTGCAGTTGAGGACTTaGGGCCTGAGGTGGTATGAA | + |
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Preference number: 2 (lower is better) Translates to: QLSRDFITHLITKDSVQRVQLRT*GLRWYE Trigger: TTCATACCACCTCAGGCCTCAAGTCCTCAACTGCAC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGTCTTCATGTGGTCCTaGTTCCGCAATAGTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: QLSRDFITHLITKDSVQRVFMWS*FRNSLA Trigger: GGCAAGACTATTGCGGAAGCAGGACCACATGAAGAC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585568.5 |
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| 3UTR-3UTR CCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTAGGGCAGTCTTCATGTaGTCCTGCTTCCGCAATAGT | + |
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Preference number: 2 (lower is better) Translates to: QLSRDFITHLITKDSVQRRAVFM*SCFRNS Trigger: ACTATTGCGGAAGCAGGACCACATGAAGACTGCCCT...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585568.5 |
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| 3UTR-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTTTGTGGCAACATAGATaGGCTTTGGAGGACATGTTA | + |
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Preference number: 2 (lower is better) Translates to: QLSRDFITHLITKDSVQRLWQHR*ALEDML Trigger: TAACATGTCCTCCAAAGCTCATCTATGTTGCCACAA...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCTTGTGGCAACATAGATaGGCTTTGGAGGACATGTTA | + |
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Preference number: 2 (lower is better) Translates to: YRQLSRDFITHLITKDSVLWQHR*ALEDML Trigger: TAACATGTCCTCCAAAGCTCATCTATGTTGCCACAA...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR CCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCACTACCATGTTCATTaGAGCACTATTCTTCACAAT | + |
|
Preference number: 2 (lower is better) Translates to: QLSRDFITHLITKDSVQRHYHVH*STILHN Trigger: ATTGTGAAGAATAGTGCTCCAATGAACATGGTAGTG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCTTTATGATGGAGTCTTaGGACTGGGTTAAGTCACTT | + |
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Preference number: 2 (lower is better) Translates to: YRQLSRDFITHLITKDSVFMMES*DWVKSL Trigger: AAGTGACTTAACCCAGTCTCAAGACTCCATCATAAA...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585568.5 |
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| 3UTR-3UTR CCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGAGATAGCCAAAGATTaGGTAACAAGATACATAAGT | + |
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Preference number: 2 (lower is better) Translates to: QLSRDFITHLITKDSVQREIAKD*VTRYIS Trigger: ACTTATGTATCTTGTTACCCAATCTTTGGCTATCTC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCACTACCATGTTCATTaGAGCACTATTCTTCACAAT | + |
|
Preference number: 2 (lower is better) Translates to: YRQLSRDFITHLITKDSVHYHVH*STILHN Trigger: ATTGTGAAGAATAGTGCTCCAATGAACATGGTAGTG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTTCCATAGTTTTGCTCTaGTGTCAAGCCTCTGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QLSRDFITHLITKDSVQRSIVLL*CQASEA Trigger: TGCCTCAGAGGCTTGACACAAGAGCAAAACTATGGA...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCACACTTCCATAGTTTaGCTCTTGTGTCAAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: QLSRDFITHLITKDSVQRHTSIV*LLCQAS Trigger: AGAGGCTTGACACAAGAGCAAAACTATGGAAGTGTG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGCTTCCGCAATAGTCTaGCCGCCTGAATTTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: YRQLSRDFITHLITKDSVASAIV*PPEFPS Trigger: AGAAGGAAATTCAGGCGGCAAGACTATTGCGGAAGC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585568.5 |
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| 3UTR-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCTCCATAGTTTTGCTCTaGTGTCAAGCCTCTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: YRQLSRDFITHLITKDSVSIVLL*CQASEA Trigger: TGCCTCAGAGGCTTGACACAAGAGCAAAACTATGGA...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCTAGCAATCCCACTATaGAGTATATCCAAAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: QLSRDFITHLITKDSVQRLAIPL*SISKAK Trigger: CTTTGCTTTGGATATACTCAATAGTGGGATTGCTAG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGTTGATGCCACAAACTaGAATACTCTAGGATACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLSRDFITHLITKDSVQRVDATN*NTLGYK Trigger: TTTGTATCCTAGAGTATTCAAGTTTGTGGCATCAAC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585568.5 |
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| 3UTR-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCTAGCAATCCCACTATaGAGTATATCCAAAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: YRQLSRDFITHLITKDSVLAIPL*SISKAK Trigger: CTTTGCTTTGGATATACTCAATAGTGGGATTGCTAG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| 3UTR CCA 72 bp | CTATTGAGTATATCCAAAGCAAAGGAAATCAGTATGTaGATCAGATATCTACACTACCATGTTCATTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: LLSISKAKEISM*IRYLHYHVHWS Trigger: GCTCCAATGAACATGGTAGTGTAGATATCTGATCCACATACTGATTTCCTTTGCTTTGGATATACTCAATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | AGGGAACAGGACCACCAGCCAGAAAGGGGTTGTAATAAACCAGGAAAGAGATTGGACCCCAAGCGAAGGTaGCAAGTTCAGAAGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: REQDHQPERGCNKPGKRLDPKRR*QVQKDP Trigger: CGGGTCCTTCTGAACTTGTCACCTTCGCTTGGGGTC...CAATCTCTTTCCTGGTTTATTACAACCCCTTTCTGGCTGGTGGTCCTGTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| CDS-3UTR TCA 90 bp | GAACAGGACCACCAGCCAGAAAGGGGTTGTAATAAACCAGGAAAGAGATTGGGCTGGTTGATGCCCCACTaGCAGCAGGTTCGTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: EQDHQPERGCNKPGKRLGWLMPH*QQVREV Trigger: AACTTCACGAACCTGCTGTCAGTGGGGCATCAACCA...GCCCAATCTCTTTCCTGGTTTATTACAACCCCTTTCTGGCTGGTGGTCCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| CDS-3UTR CCA 90 bp | AGGGAACAGGACCACCAGCCAGAAAGGGGTTGTAATAAACCAGGAAAGAGATTGGAGCACAAAGGAAGGTaGAATTGTGCCTCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: REQDHQPERGCNKPGKRLEHKGR*NCASAL Trigger: GAGAGCGGAGGCACAATTCCACCTTCCTTTGTGCTC...CAATCTCTTTCCTGGTTTATTACAACCCCTTTCTGGCTGGTGGTCCTGTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGACCCCAAGCGAAGGTaGCAAGTTCAGAAGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRDPKRR*QVQKDP Trigger: CGGGTCCTTCTGAACTTGTCACCTTCGCTTGGGGTC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGACCCCAAGCGAAGGTaGCAAGTTCAGAAGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVDPKRR*QVQKDP Trigger: CGGGTCCTTCTGAACTTGTCACCTTCGCTTGGGGTC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAGGACCACCAGCCAGAAAGGGGTTGTAATAAACCAGGAAAGAGATTGGGCAATAGGTCACTGCCTCCTTaGATGTGGTCATTTTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: QDHQPERGCNKPGKRLGNRSLPP*MWSFFL Trigger: TAGGAAAAATGACCACATTCAAGGAGGCAGTGACCT...ATTGCCCAATCTCTTTCCTGGTTTATTACAACCCCTTTCTGGCTGGTGGTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTTGGTTGATGCCCCACTaGCAGCAGGTTCGTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRWLMPH*QQVREV Trigger: AACTTCACGAACCTGCTGTCAGTGGGGCATCAACCA...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429154.7 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTAAGCCAGCAGCCAAGTaGAACAGGGTAAGATTACCC | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRKPAAK*NRVRLP Trigger: GGGTAATCTTACCCTGTTGCACTTGGCTGCTGGCTT...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCTAAGGCCTGTCTCCTaGATGACAAGCGTAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRLRPVS*MTSVSS Trigger: AGAACTTACGCTTGTCATTCAGGAGACAGGCCTTAG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCAAGGTACCTGTAGTTaGCATTCTAGTGGTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRQGTCS*HSSGHH Trigger: GTGGTGACCACTAGAATGTCAACTACAGGTACCTTG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | GGAAAGAGATTGGGCAATTTAGATCAGGGTGATATAAGTGGGCATGGTCAGAAGATCCTTGAAGGTCACTaGCTCCTTGAATGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: GKRLGNLDQGDISGHGQKILEGH*LLECGH Trigger: ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGAT...CTTCTGACCATGCCCACTTATATCACCCTGATCTAAATTGCCCAATCTCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGAGCACAAAGGAAGGTaGAATTGTGCCTCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVEHKGR*NCASAL Trigger: GAGAGCGGAGGCACAATTCCACCTTCCTTTGTGCTC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTAGGTCACTGCCTCCTTaGATGTGGTCATTTTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRRSLPP*MWSFFL Trigger: TAGGAAAAATGACCACATTCAAGGAGGCAGTGACCT...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTATCCTTGAAGGTCACTaGCTCCTTGAATGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRILEGH*LLECGH Trigger: ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGAT...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGTCTTCATGTGGTCCTaGTTCCGCAATAGTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVVFMWS*FRNSLA Trigger: GGCAAGACTATTGCGGAAGCAGGACCACATGAAGAC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGTATGGACCCTCTGGTaGAAGTTAAGACCTGACTTA | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRVWTLW*KLRPDL Trigger: TAAGTCAGGTCTTAACTTGCACCAGAGGGTCCATAC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCAGGGCAGTCTTCATGTaGTCCTGCTTCCGCAATAGT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVRAVFM*SCFRNS Trigger: ACTATTGCGGAAGCAGGACCACATGAAGACTGCCCT...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCCAGTATGGACCCTCTaGTGCAAGTTAAGACCTGAC | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVPVWTL*CKLRPD Trigger: GTCAGGTCTTAACTTGCACCAGAGGGTCCATACTGG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCTAAGGCCTGTCTCCTaGATGACAAGCGTAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVLRPVS*MTSVSS Trigger: AGAACTTACGCTTGTCATTCAGGAGACAGGCCTTAG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAAGGTACCTGTAGTTaGCATTCTAGTGGTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVQGTCS*HSSGHH Trigger: GTGGTGACCACTAGAATGTCAACTACAGGTACCTTG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTTTTATGATGGAGTCTTaGGACTGGGTTAAGTCACTT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRFMMES*DWVKSL Trigger: AAGTGACTTAACCCAGTCTCAAGACTCCATCATAAA...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGAGATTATAGACAACTaGGCAGAGACTTTATCACAC | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQREIIDN*AETLSH Trigger: GTGTGATAAAGTCTCTGCTCAGTTGTCTATAATCTC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGATATAAACACACACTaGAGTGCTTACCATATGCCT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRDINTH*SAYHMP Trigger: AGGCATATGGTAAGCACTTCAGTGTGTGTTTATATC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCATCCTTGAAGGTCACTaGCTCCTTGAATGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVILEGH*LLECGH Trigger: ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGAT...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTAGCGTAAGTTCTGTTTaGAACCCTACTGCACAATTT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRSVSSV*NPTAQF Trigger: AAATTGTGCAGTAGGGTTGCAAACAGAACTTACGCT...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGAACTGAGTGTATTCTaGATTTTAACTCGTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRELSVF*ILTRVP Trigger: AGGGACACGAGTTAAAATGCAGAATACACTCAGTTC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCTTGTGGTCTCCTTGTTaGTCTTTACAGAAAGACCGG | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVLWSPC*SLQKDR Trigger: CCGGTCTTTCTGTAAAGACCAACAAGGAGACCACAA...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGTCCTGGTAGGTAAGTaGTTAACGTTAATAAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRVLVGK*LTLISL Trigger: CAAACTTATTAACGTTAATCACTTACCTACCAGGAC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429154.7 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTTGTTTGCAACCCTACTaGACAATTTACAAGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRCLQPY*TIYKSS Trigger: AGAACTCTTGTAAATTGTGCAGTAGGGTTGCAAACA...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCATTATATCAAGGCCTaGATGGAAATACAGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRHYIKA*MEIQKQ Trigger: TTGCTTCTGTATTTCCATGCAGGCCTTGATATAATG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTATATCAAGGCCTGCATaGAAATACAGAAGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRISRPA*KYRSNH Trigger: ATGATTGCTTCTGTATTTCCATGCAGGCCTTGATAT...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCCGATAGGTTTCTCTTaGTATTTCATAGAGATAGGA | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRPIGFS*YFIEIG Trigger: TCCTATCTCTATGAAATACCAAGAGAAACCTATCGG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGAGATTATAGACAACTaGGCAGAGACTTTATCACAC | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVEIIDN*AETLSH Trigger: GTGTGATAAAGTCTCTGCTCAGTTGTCTATAATCTC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGATATAAACACACACTaGAGTGCTTACCATATGCCT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVDINTH*SAYHMP Trigger: AGGCATATGGTAAGCACTTCAGTGTGTGTTTATATC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCAGCGTAAGTTCTGTTTaGAACCCTACTGCACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVSVSSV*NPTAQF Trigger: AAATTGTGCAGTAGGGTTGCAAACAGAACTTACGCT...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCAACGTAACTACATCTaGCACGTAAAAAGTATTACT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRQRNYI*HVKSIT Trigger: AGTAATACTTTTTACGTGGCAGATGTAGTTACGTTG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCATTGTATGCAACCAATaGAGCATTAGACAAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVIVCNQ*SIRQSH Trigger: GTGGCTTTGTCTAATGCTCCATTGGTTGCATACAAT...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCAAAAATTGTCAAATTaGCATAGCTTCTACCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: QLSRDFITHLITKDSVQRQKLSN*HSFYLS Trigger: ACTCAGGTAGAAGCTATGCCAATTTGACAATTTTTG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR TCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCTCCTACAAGCCTGGATaGAATATATTATCAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVSYKPG*NILSVW Trigger: CCATACTGATAATATATTTCATCCAGGCTTGTAGGA...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCATTATATCAAGGCCTaGATGGAAATACAGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVHYIKA*MEIQKQ Trigger: TTGCTTCTGTATTTCCATGCAGGCCTTGATATAATG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCATATCAAGGCCTGCATaGAAATACAGAAGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVISRPA*KYRSNH Trigger: ATGATTGCTTCTGTATTTCCATGCAGGCCTTGATAT...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCCGATAGGTTTCTCTTaGTATTTCATAGAGATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVPIGFS*YFIEIG Trigger: TCCTATCTCTATGAAATACCAAGAGAAACCTATCGG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR GCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTAACTACATCTaGCACGTAAAAAGTATTACT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVQRNYI*HVKSIT Trigger: AGTAATACTTTTTACGTGGCAGATGTAGTTACGTTG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGAGATAGCCAAAGATTaGGTAACAAGATACATAAGT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVEIAKD*VTRYIS Trigger: ACTTATGTATCTTGTTACCCAATCTTTGGCTATCTC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CCA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCTCTGTCCTACAAGCCTaGATGAAATATATTATCAGT | + |
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Preference number: 4 (lower is better) Translates to: YRQLSRDFITHLITKDSVSVLQA*MKYIIS Trigger: ACTGATAATATATTTCATCCAGGCTTGTAGGACAGA...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | CAGGACCACCAGCCAGAAAGGGGTTGTAATAAACCAGGAAAGAGATTGGGCAATCAAAGGAAGGTGGAATaGTGCCTCCGCTCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: QDHQPERGCNKPGKRLGNQRKVE*CLRSPP Trigger: TGGCGGAGAGCGGAGGCACAATTCCACCTTCCTTTG...ATTGCCCAATCTCTTTCCTGGTTTATTACAACCCCTTTCTGGCTGGTGGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| CDS-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTCAAAGGAAGGTGGAATaGTGCCTCCGCTCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: QLSRDFITHLITKDSVQRQRKVE*CLRSPP Trigger: TGGCGGAGAGCGGAGGCACAATTCCACCTTCCTTTG...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAAAGGAAGGTGGAATaGTGCCTCCGCTCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: YRQLSRDFITHLITKDSVQRKVE*CLRSPP Trigger: TGGCGGAGAGCGGAGGCACAATTCCACCTTCCTTTG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | CAGGACCACCAGCCAGAAAGGGGTTGTAATAAACCAGGAAAGAGATTGGGCAATAAACCAGGAAAGAGATaGGGCAATTTAGATCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: QDHQPERGCNKPGKRLGNKPGKR*GNLDQG Trigger: ACCCTGATCTAAATTGCCCAATCTCTTTCCTGGTTT...ATTGCCCAATCTCTTTCCTGGTTTATTACAACCCCTTTCTGGCTGGTGGTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585632.5 |
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| CDS-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGGAGTCTTCAGTGTCTaGAGTAATGGAGCACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: QLSRDFITHLITKDSVQRGVFSV*SNGAQR Trigger: CCTTTGTGCTCCATTACTCAAGACACTGAAGACTCC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTGATGAGTTTTCTCCATaGTGGTCTCCTTGTTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QLSRDFITHLITKDSVQRDEFSP*WSPCWS Trigger: AGACCAACAAGGAGACCACAATGGAGAAAACTCATC...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGGAGTCTTCAGTGTCTaGAGTAATGGAGCACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: YRQLSRDFITHLITKDSVGVFSV*SNGAQR Trigger: CCTTTGTGCTCCATTACTCAAGACACTGAAGACTCC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCGATGAGTTTTCTCCATaGTGGTCTCCTTGTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YRQLSRDFITHLITKDSVDEFSP*WSPCWS Trigger: AGACCAACAAGGAGACCACAATGGAGAAAACTCATC...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCACACTTCCATAGTTTaGCTCTTGTGTCAAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YRQLSRDFITHLITKDSVHTSIV*LLCQAS Trigger: AGAGGCTTGACACAAGAGCAAAACTATGGAAGTGTG...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTACCCAAAATAATGCTTaGGATTGCAGAACTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLSRDFITHLITKDSVQRTQNNA*DCRTEC Trigger: ACACTCAGTTCTGCAATCCAAAGCATTATTTTGGGT...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | CAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCCAACGTTCCGATAGGTTTCTCTaGGTATTTCATAGAGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLSRDFITHLITKDSVQRSDRFL*VFHRDR Trigger: CCTATCTCTATGAAATACCAAGAGAAACCTATCGGA...ACGTTGGACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCAAGCGTAAGTTCTGTTaGCAACCCTACTGCACAATT | + |
|
Preference number: 5 (lower is better) Translates to: YRQLSRDFITHLITKDSVKRKFC*QPYCTI Trigger: AATTGTGCAGTAGGGTTGCAAACAGAACTTACGCTT...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCACCCAAAATAATGCTTaGGATTGCAGAACTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YRQLSRDFITHLITKDSVTQNNA*DCRTEC Trigger: ACACTCAGTTCTGCAATCCAAAGCATTATTTTGGGT...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS-3UTR CAA 90 bp | TATAGACAACTGAGCAGAGACTTTATCACACACCTCATTACTAAGGATTCTGTCTCCGATAGGTTTCTCTaGGTATTTCATAGAGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: YRQLSRDFITHLITKDSVSDRFL*VFHRDR Trigger: CCTATCTCTATGAAATACCAAGAGAAACCTATCGGA...GACAGAATCCTTAGTAATGAGGTGTGTGATAAAGTCTCTGCTCAGTTGTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429154.7 ENST00000585568.5 |
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| CDS GCA 90 bp | AATTTGGAAATTAAAAGGAATGAAGTACCAACCCATGCTACAACATaGACAAACCTTGGAAACATCATAAGAGAAAGAAGCCAGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NLEIKRNEVPTHATT*TNLGNIIRERSQSP Trigger: TGGTGACTGGCTTCTTTCTCTTATGATGTTTCCAAGGTTTGTGCATGTTGTAGCATGGGTTGGTACTTCATTCCTTTTAATTTCCAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585491.1 |
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