RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF197 (Homo sapiens)

Ensembl gene IDs: ENSG00000186448

Ensembl transcript IDs: ENST00000334075.6, ENST00000344387.9, ENST00000383744.8, ENST00000383745.6, ENST00000396058.1, ENST00000412641.1, ENST00000627004.1, ENST00000627517.2, ENST00000627752.2, ENST00000627845.1, ENST00000627858.1, ENST00000628172.3

Found 775 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGAGGAAGTGTTGTTCCTGGGGCACTC +
Preference number: 1 (lower is better)
Translates to: ATRSVGGCGQISAAM*LPGSTGGSVVPGAL
Trigger: GAGTGCCCCAGGAACAACACTTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR CCA 90 bp AGCTGCTATGTGGCTGCCAGGAAGTACAGGAGGAAGTGTTGTTCCTaGGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCTTGACAAG +
Preference number: 1 (lower is better)
Translates to: SCYVAARKYRRKCCS*GTHHLLESVLILDK
Trigger: CTTGTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR TCA 90 bp ACCAACTCCTGGGGCTGGGCTGTTAGGAGCATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCCTGGGAAAGGGCAGAAGCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: TNSWGWAVRSISAIN*FLGFSSWERAEASG
Trigger: CCCTGAAGCTTCTGCCCTTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGGCACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR TCA 90 bp TGGGCACTGACTGCCCACAAGTGGATTCTGCACTGGCTTAATCAGTaGAGAGCTTGGCTCCATGTGAAAAATTTATGTCCCAGTAAATTT +
Preference number: 1 (lower is better)
Translates to: WALTAHKWILHWLNQ*RAWLHVKNLCPSKF
Trigger: AAATTTACTGGGACATAAATTTTTCACATGGAGCCAAGCTCTTCACTGATTAAGCCAGTGCAGAATCCACTTGTGGGCAGTCAGTGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR CCA 90 bp GCTTTCTTATGCAATATTCCACGTTCTGGATGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGTAACC +
Preference number: 1 (lower is better)
Translates to: AFLCNIPRSGCVCFS*CLLFVPLPPVFPVT
Trigger: GGTTACAGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATATTGCATAAGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
3UTR TCA 90 bp AGTGGATTCTGCACTGGCTTAATCAGTGAAGAGCTTGGCTCCATGTaGAAAATTTATGTCCCAGTAAATTTAGTGCTGGGACAGAATGTT +
Preference number: 1 (lower is better)
Translates to: SGFCTGLISEELGSM*KIYVPVNLVLGQNV
Trigger: AACATTCTGTCCCAGCACTAAATTTACTGGGACATAAATTTTTCACATGGAGCCAAGCTCTTCACTGATTAAGCCAGTGCAGAATCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR TCA 90 bp ACCTTTCACTCTAATGAGGAACCAGCCCCCAAGAAACTGTGGGGTTaGATTAATAACATTTATGATAATCAACACACCACTTTGACATTA +
Preference number: 1 (lower is better)
Translates to: TFHSNEEPAPKKLWG*INNIYDNQHTTLTL
Trigger: TAATGTCAAAGTGGTGTGTTGATTATCATAAATGTTATTAATTCAACCCCACAGTTTCTTGGGGGCTGGTTCCTCATTAGAGTGAAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR TCA 90 bp GCAAGTTTTCATTTCTCTGGGATAAATGCTCAGAAGTGCAATTCCTaGAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCAAA +
Preference number: 1 (lower is better)
Translates to: ASFHFSGINAQKCNS*SMTYTCVVLQETAK
Trigger: TTTGGCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTTATCCCAGAGAAATGAAAACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR CCA 90 bp ACATTCGTATACAGGTTTTTGTGTGAACGCAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATAC +
Preference number: 1 (lower is better)
Translates to: TFVYRFLCERKFSFL*DKCSEVQFLKHDIY
Trigger: GTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTTATCCCAGAGAAATGAAAACTTGCGTTCACACAAAAACCTGTATACGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR TCA 90 bp GTTTCATTAGTAACAGGCTATCATTTGACAGCAATGATGAAATATTaGTTAGAATTCACAATGACTGTGGCAGGGATCATCAGCTCAACT +
Preference number: 1 (lower is better)
Translates to: VSLVTGYHLTAMMKY*LEFTMTVAGIISST
Trigger: AGTTGAGCTGATGATCCCTGCCACAGTCATTGTGAATTCTAATCAATATTTCATCATTGCTGTCAAATGATAGCCTGTTACTAATGAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR TCA 90 bp ATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATaGACATTCGTATACAGGTTTTTGTGTGAACGCAAGTTTTCATTT +
Preference number: 1 (lower is better)
Translates to: IWVAYRFRPLQIKLL*TFVYRFLCERKFSF
Trigger: AAATGAAAACTTGCGTTCACACAAAAACCTGTATACGAATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR GCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGCGATCCTGGCTCACTaGAACCTCCGCCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHAILAH*NLRPPR
Trigger: CCTGGGAGGGCGGAGGTTGCAGTGAGCCAGGATCGC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACAATCCTGACCTCAGGTaGTCCACTCGCTTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHNPDLR*STRFGL
Trigger: GAGGCCGAAGCGAGTGGATCACCTGAGGTCAGGATT...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR GCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGGGATTACCGGTGTGTaGCCCCATGCCCGGATAATT +
Preference number: 2 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHGITGV*PHARII
Trigger: AATTATCCGGGCATGGGGGCACACACCGGTAATCCC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCTTGTCTCGAACTCCTaGGCTCAAGGGATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLLVSNS*AQGIFP
Trigger: TGGGAAGATCCCTTGAGCCCAGGAGTTCGAGACAAG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR CAA 90 bp AAATTTCAGCTGCTATGTGGCTGCCAGGAAGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCT +
Preference number: 2 (lower is better)
Translates to: KFQLLCGCQEVQEEV*FLGHSPPSGECPDP
Trigger: AGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR GCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTTGCCCAGGCTGGAGTaGAATGGCGCGATCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVLPRLE*NGAILA
Trigger: AGCCAGGATCGCGCCATTGCACTCCAGCCTGGGCAA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCAATCCTGACCTCAGGTaGTCCACTCGCTTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVNPDLR*STRFGL
Trigger: GAGGCCGAAGCGAGTGGATCACCTGAGGTCAGGATT...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCAATCCTGACCTCAGGTaGTCCACTCGCTTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LTFWIILSVQVFHSSDTINPDLR*STRFGL
Trigger: GAGGCCGAAGCGAGTGGATCACCTGAGGTCAGGATT...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR TCA 90 bp TTGAATGCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTGGTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: LNATRSVGGCGQISAAMWFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...CCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR GCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGGGATTACCGGTGTGTaGCCCCATGCCCGGATAATT +
Preference number: 2 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIGITGV*PHARII
Trigger: AATTATCCGGGCATGGGGGCACACACCGGTAATCCC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR GCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAATTGCCCAGGCTGGAGTaGAATGGCGCGATCCTGGCT +
Preference number: 2 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKLPRLE*NGAILA
Trigger: AGCCAGGATCGCGCCATTGCACTCCAGCCTGGGCAA...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR GCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTACAGGAGTGAGCCACTaGACCCAGCCCATGTCTACT +
Preference number: 2 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSTGVSH*TQPMST
Trigger: AGTAGACATGGGCTGGGTGCAGTGGCTCACTCCTGT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 2 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGGGGGTAATGGGCACTaGCTGCCCACAAGTGGATTC +
Preference number: 2 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMGGNGH*LPTSGF
Trigger: GAATCCACTTGTGGGCAGTCAGTGCCCATTACCCCC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR GCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR TCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 2 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR TCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 2 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR GCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCAGGGATTACCGGTGTGTaGCCCCATGCCCGGATAATT +
Preference number: 2 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTAGITGV*PHARII
Trigger: AATTATCCGGGCATGGGGGCACACACCGGTAATCCC...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR GCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGGGATTACCGGTGTGTaGCCCCATGCCCGGATAATT +
Preference number: 2 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKGITGV*PHARII
Trigger: AATTATCCGGGCATGGGGGCACACACCGGTAATCCC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR GCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCACAGGAGTGAGCCACTaGACCCAGCCCATGTCTACT +
Preference number: 2 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCTGVSH*TQPMST
Trigger: AGTAGACATGGGCTGGGTGCAGTGGCTCACTCCTGT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR GCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAACAGGAGTGAGCCACTaGACCCAGCCCATGTCTACT +
Preference number: 2 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKTGVSH*TQPMST
Trigger: AGTAGACATGGGCTGGGTGCAGTGGCTCACTCCTGT...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR GCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCGTAATGGGCACTGACTaGCCACAAGTGGATTCTGCA +
Preference number: 2 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSVMGTD*PQVDSA
Trigger: TGCAGAATCCACTTGTGGGCAGTCAGTGCCCATTAC...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR GCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR CCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGCTTGTCTCGAACTCCTaGGCTCAAGGGATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMLVSNS*AQGIFP
Trigger: TGGGAAGATCCCTTGAGCCCAGGAGTTCGAGACAAG...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 2 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR CCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAACTTGTCTCGAACTCCTaGGCTCAAGGGATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKLVSNS*AQGIFP
Trigger: TGGGAAGATCCCTTGAGCCCAGGAGTTCGAGACAAG...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR CCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCACTTGTCTCGAACTCCTaGGCTCAAGGGATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTALVSNS*AQGIFP
Trigger: TGGGAAGATCCCTTGAGCCCAGGAGTTCGAGACAAG...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 2 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR TCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCAGCCCAACTCCACACCTaGCATTCTGGATCATACTGT +
Preference number: 2 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTAAQLHT*HSGSYC
Trigger: ACAGTATGATCCAGAATGTCAGGTGTGGAGTTGGGC...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 2 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMLSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 2 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 2 (lower is better)
Translates to: YLTILLCISLMPNDVEHLTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR TCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGACTGCCCTTCCATTTTaGCACTCTCCATCTGTTAAG +
Preference number: 2 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMTALPF*HSPSVK
Trigger: CTTAACAGATGGAGAGTGTCAAAATGGAAGGGCAGT...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR TCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAACACTGGCTTAATCAGTaGAGAGCTTGGCTCCATGTG +
Preference number: 2 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKHWLNQ*RAWLHV
Trigger: CACATGGAGCCAAGCTCTTCACTGATTAAGCCAGTG...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCTGACTGCCCACAAGTaGATTCTGCACTGGCTTAAT +
Preference number: 2 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMLTAHK*ILHWLN
Trigger: ATTAAGCCAGTGCAGAATCCACTTGTGGGCAGTCAG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR GCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTAAAGCAGGGTACCACTaGCCTTCCATTTTGACACTC +
Preference number: 2 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIKAGYH*PSILTL
Trigger: GAGTGTCAAAATGGAAGGGCAGTGGTACCCTGCTTT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR GCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCCCACAAGTGGATTCTaGACTGGCTTAATCAGTGAA +
Preference number: 2 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCPTSGF*TGLISE
Trigger: TTCACTGATTAAGCCAGTGCAGAATCCACTTGTGGG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 2 (lower is better)
Translates to: KAENGIINSQQTQDSLNNISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR TCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR GCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCAGGGCAGCTTTCTTATaGAATATTCCACGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCRAAFL*NIPRSG
Trigger: TCCAGAACGTGGAATATTGCATAAGAAAGCTGCCCT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR GCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGAGGGCAGCTTTCTTATaGAATATTCCACGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMRAAFL*NIPRSG
Trigger: TCCAGAACGTGGAATATTGCATAAGAAAGCTGCCCT...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTTATCTTTTAGGTTCCTaGAATCCCCCTCATTCTAAT +
Preference number: 2 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFYLLGS*NPPHSN
Trigger: ATTAGAATGAGGGGGATTCCAGGAACCTAAAAGATA...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATATTACATCACAGAAGGTaGCACATTATGTGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: FHVDSTMNILLCLPDLSILHHRR*HIMWAV
Trigger: GACAGCCCACATAATGTGCCACCTTCTGTGATGTAA...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR CAA 90 bp TCAACATTGGTACAGTATGTGTGTATAGGTATAGCACCTATAGATTaGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCAC +
Preference number: 2 (lower is better)
Translates to: STLVQYVCIGIAPID*CNHHCNQDTQVFHH
Trigger: GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGCTATACCTATACACACATACTGTACCAATGTTGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCATTTTGTTACTCGGTaGAGAGGTAAATCACAGCAT +
Preference number: 2 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCHFVTR*RGKSQH
Trigger: ATGCTGTGATTTACCTCTTCACCGAGTAACAAAATG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR GCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAAGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 2 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR GCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATAAGAATCACAGGAAGTTaGAAAGATAGCACCCTTCAC +
Preference number: 2 (lower is better)
Translates to: FHVDSTMNILLCLPDLSIRITGS*KDSTLH
Trigger: GTGAAGGGTGCTATCTTTGCAACTTCCTGTGATTCT...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCCACAAAGACCTTTCTaGTGCTACCTTTTAATAGTT +
Preference number: 2 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHPQRPF*CYLLIV
Trigger: AACTATTAAAAGGTAGCACCAGAAAGGTCTTTGTGG...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR GCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAATTGTGTAACCACCACTaGAATCAAGATACACAAGTG +
Preference number: 2 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKLCNHH*NQDTQV
Trigger: CACTTGTGTATCTTGATTGCAGTGGTGGTTACACAA...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHKFSFL*DKCSEV
Trigger: CACTTCTGAGCATTTATCCCAGAGAAATGAAAACTT...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
3UTR-3UTR TCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR TCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR GCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 2 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR GCA 72 bp TCCTGGAGGTTGAATGCCACTAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCTATGTGGCTGCCAGGA +
Preference number: 3 (lower is better)
Translates to: SWRLNATRSVGG*GQISAAMWLPG
Trigger: TCCTGGCAGCCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAACCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR TCA 72 bp CTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTaGCATTCTGGATCATACTGTCTGTTCAGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: LISRLLSAQLHT*HSGSYCLFRFS
Trigger: GGAAAACCTGAACAGACAGTATGATCCAGAATGTCAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACTCATCAGCAGACTCTaGTCCGCCCAACTCCACACC +
Preference number: 3 (lower is better)
Translates to: FHVDSTMNILLCLPDLSILISRL*SAQLHT
Trigger: GGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAG...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR TCA 72 bp ACTGCCCACAAGTGGATTCTGCACTGGCTTAATCAGTaGAGAGCTTGGCTCCATGTGAAAAATTTATGTCCC +
Preference number: 3 (lower is better)
Translates to: TAHKWILHWLNQ*RAWLHVKNLCP
Trigger: GGGACATAAATTTTTCACATGGAGCCAAGCTCTTCACTGATTAAGCCAGTGCAGAATCCACTTGTGGGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCAGTGCTCTTTTAGGTaGTCCTCATCAGCAGACTCT +
Preference number: 3 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSQCSFR*SSSADS
Trigger: AGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 3 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 3 (lower is better)
Translates to: KAENGIINSQQTQDSLNNVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR TCA 72 bp GTTCCTCTGCCTCCTGTATTTCCTGTAACCTGGCAATaGGGTCCAAGAAGCTTGATTAAATTCAGGTTGAAC +
Preference number: 3 (lower is better)
Translates to: VPLPPVFPVTWQ*GPRSLIKFRLN
Trigger: GTTCAACCTGAATTTAATCAAGCTTCTTGGACCTCATTGCCAGGTTACAGGAAATACAGGAGGCAGAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTAAGGAGCATGCTTTaGAGTCATCTGAGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLRSML*SHLSLL
Trigger: AAGAAGGCTCAGATGACTCAAAAGCATGCTCCTTAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR TCA 72 bp AGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCATCCTTGCCAGCAGTTA +
Preference number: 3 (lower is better)
Translates to: RVAVPFYIPSNV*DPVSLHPCQQL
Trigger: TAACTGCTGGCAAGGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR CCA 72 bp TGCAATATTCCACGTTCTGGATGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTT +
Preference number: 3 (lower is better)
Translates to: CNIPRSGCVCFS*CLLFVPLPPVF
Trigger: AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 3 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCTAAGGAGCATGCTTTaGAGTCATCTGAGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCLRSML*SHLSLL
Trigger: AAGAAGGCTCAGATGACTCAAAAGCATGCTCCTTAG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCTGTTTCTCTTCATCCTaGCCAGCAGTTACCACCATT +
Preference number: 3 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCCFSSS*PAVTTI
Trigger: AATGGTGGTAACTGCTGGCAAGGATGAAGAGAAACA...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATTTCCAGTTTTCACTCTaGGCTACCTTTCACTCTAAT +
Preference number: 3 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHFQFSL*ATFHSN
Trigger: ATTAGAGTGAAAGGTAGCCAAGAGTGAAAACTGGAA...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTCACAGCATTCTCCATaGTTAAAGTACATATGTCCT +
Preference number: 3 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSSQHSP*LKYICP
Trigger: AGGACATATGTACTTTAACAATGGAGAATGCTGTGA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR TCA 72 bp CAACCCTGTGAGGTAGGTATCATGTCAACATTTGACTaGCAGGAAACTAAAGCTTTAGAGGCTGACTTAATA +
Preference number: 3 (lower is better)
Translates to: QPCEVGIMSTFD*QETKALEADLI
Trigger: TATTAAGTCAGCCTCTAAAGCTTTAGTTTCCTGTCAGTCAAATGTTGACATGATACCTACCTCACAGGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATTCACAGCATTCTCCATaGTTAAAGTACATATGTCCT +
Preference number: 3 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHSQHSP*LKYICP
Trigger: AGGACATATGTACTTTAACAATGGAGAATGCTGTGA...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
3UTR-3UTR CAA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTAAGCTGGGAAATAAATaGTTTTCCTTGGCATCACTG +
Preference number: 3 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIKLGNK*FSLASL
Trigger: CAGTGATGCCAAGGAAAACAATTTATTTCCCAGCTT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
3UTR-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 3 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 3 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR TCA 72 bp CATTTCTCTGGGATAAATGCTCAGAAGTGCAATTCCTaGAGCATGACATATACATGTGTGGTTTTACAAGAA +
Preference number: 3 (lower is better)
Translates to: HFSGINAQKCNS*SMTYTCVVLQE
Trigger: TTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTTATCCCAGAGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR CCA 72 bp ACCACAATTTGTTTTAACCACCTAAGGAAGGATATATaGGTTGCCTACAGGTTTCGACCATTACAAATAAAG +
Preference number: 3 (lower is better)
Translates to: TTICFNHLRKDI*VAYRFRPLQIK
Trigger: CTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATATCCTTCCTTAGGTGGTTAAAACAAATTGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
3UTR-3UTR CAA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAAGTATCATGTCAACATTaGACTGACAGGAAACTAAAG +
Preference number: 3 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKVSCQH*TDRKLK
Trigger: CTTTAGTTTCCTGTCAGTCAAATGTTGACATGATAC...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp TTGAATGCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTGGATCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: LNATRSVGGCGQISAAMWIGGSR*GSSLAY
Trigger: GTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGAT...CCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp GCCCTCTGGATTGGGCCCAGACATGCCCATTCCTCTGAAGTGAAGCATACTGACCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: ALWIGPRHAHSSEVKHTDLGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...GTCAGTATGCTTCACTTCAGAGGAATGGGCATGTCTGGGCCCAATCCAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR GCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGTTGCCCAGGCTGGAGTaGAATGGCGCGATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLLPRLE*NGAILA
Trigger: AGCCAGGATCGCGCCATTGCACTCCAGCCTGGGCAA...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLLGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCCCTCTGGATTGGGCCCAGACATGCCCATTCCTCTGAAGTGAAGCATACTGACCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: ALWIGPRHAHSSEVKHTDQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...GTCAGTATGCTTCACTTCAGAGGAATGGGCATGTCTGGGCCCAATCCAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR GCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTCTGCGGCTCCAGCCTTaGGTACCGCCGCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPLRLQP*VPPPRR
Trigger: GCGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAG...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGCGATCCTGGCTCACTaGAACCTCCGCCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRAILAH*NLRPPR
Trigger: CCTGGGAGGGCGGAGGTTGCAGTGAGCCAGGATCGC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTGAATGCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTGGTCGCCACTTCCAGGGTaGTGGAGCTGTACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LNATRSVGGCGQISAAMWSPLPG*WSCTQV
Trigger: GACCTGGGTACAGCTCCATCACCCTGGAAGTGGCGA...CCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGCCCAGAGAAACAACTaGGCTTTCCAGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHAQRNN*AFQAPV
Trigger: GACTGGGGCCTGGAAAGCTCAGTTGTTTCTCTGGGC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396058.1
ENST00000627845.1
CDS-3UTR GCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCTGCGGCTCCAGCCTTaGGTACCGCCGCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPLRLQP*VPPPRR
Trigger: GCGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTACCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSTGGSR*GSSLAY
Trigger: GTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGGT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383745.6
ENST00000627752.2
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCCCTCTGGATTGGGCCCAGACATGCCCATTCCTCTGAAGTGAAGCATACTGACTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: ALWIGPRHAHSSEVKHTDFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...GTCAGTATGCTTCACTTCAGAGGAATGGGCATGTCTGGGCCCAATCCAGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR TCA 90 bp GCCCTCTGGATTGGGCCCAGACATGCCCATTCCTCTGAAGTGAAGCATACTGACCTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: ALWIGPRHAHSSEVKHTDLSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...GTCAGTATGCTTCACTTCAGAGGAATGGGCATGTCTGGGCCCAATCCAGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR GCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTATCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFIGGSR*GSSLAY
Trigger: GTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGAT...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGCGATCCTGGCTCACTaGAACCTCCGCCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIAILAH*NLRPPR
Trigger: CCTGGGAGGGCGGAGGTTGCAGTGAGCCAGGATCGC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTTGCCCAGGCTGGAGTaGAATGGCGCGATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRLPRLE*NGAILA
Trigger: AGCCAGGATCGCGCCATTGCACTCCAGCCTGGGCAA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGGTTTGAGCGGTAACTaGAGACCTTCCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLGLSGN*RPSHSH
Trigger: ATGACTGTGGGAAGGTCTTCAGTTACCGCTCAAACC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCACTGGCTTAATCAGTaGAGAGCTTGGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLHWLNQ*RAWLHV
Trigger: CACATGGAGCCAAGCTCTTCACTGATTAAGCCAGTG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCTGCGGCTCCAGCCTTaGGTACCGCCGCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNILRLQP*VPPPRR
Trigger: GCGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACTGCGGCTCCAGCCTTaGGTACCGCCGCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTLRLQP*VPPPRR
Trigger: GCGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCTGCGGCTCCAGCCTTaGGTACCGCCGCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYLRLQP*VPPPRR
Trigger: GCGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACATCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHIGGSR*GSSLAY
Trigger: GTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGAT...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCTTGTAAGGGTTCTCTaGACTGTGGAGTCGCTGATG +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLLVRVL*TVESLM
Trigger: CATCAGCGACTCCACAGTGCAGAGAACCCTTACAAG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCCTCATTCTCGGTCATaGTCTCCCATTCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHPHSRS*SPILGR
Trigger: CCTCCCTAGAATGGGAGACCATGACCGAGAATGAGG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTTGTCTCGAACTCCTaGGCTCAAGGGATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHLVSNS*AQGIFP
Trigger: TGGGAAGATCCCTTGAGCCCAGGAGTTCGAGACAAG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTCGCCACTTCCAGGGTaGTGGAGCTGTACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVSPLPG*WSCTQV
Trigger: GACCTGGGTACAGCTCCATCACCCTGGAAGTGGCGA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGCCTCTGATGGTCAATaGGGTAAGCATTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLASDGQ*GKHSER
Trigger: TCTCTCAGAATGCTTACCTCATTGACCATCAGAGGC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGTCTGTGTGGACTCTCTaGTGTAAGAGGAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLSVWTL*CKRRLL
Trigger: CAAAAGCCTCCTCTTACATCAGAGAGTCCACACAGA...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGGTTTGAGCGGTAACTaGAGACCTTCCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHGLSGN*RPSHSH
Trigger: ATGACTGTGGGAAGGTCTTCAGTTACCGCTCAAACC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TTGAATGCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTGGCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LNATRSVGGCGQISAAMWQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...CCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGGGATTACCGGTGTGTaGCCCCATGCCCGGATAATT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRGITGV*PHARII
Trigger: AATTATCCGGGCATGGGGGCACACACCGGTAATCCC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACGCGATCCTGGCTCACTaGAACCTCCGCCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHAILAH*NLRPPR
Trigger: CCTGGGAGGGCGGAGGTTGCAGTGAGCCAGGATCGC...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTGCCCAGGCTGGAGTaGAATGGCGCGATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTILPRLE*NGAILA
Trigger: AGCCAGGATCGCGCCATTGCACTCCAGCCTGGGCAA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTACCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNITGGSR*GSSLAY
Trigger: GTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGGT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383745.6
ENST00000627752.2
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGTGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLCLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTILGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTCGCCACTTCCAGGGTaGTGGAGCTGTACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSSPLPG*WSCTQV
Trigger: GACCTGGGTACAGCTCCATCACCCTGGAAGTGGCGA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCTTGACAGTAAAGCTTTGCATTaGGAACAATGGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KCCSWGTHHLLESVLILDSKALH*EQWSCP
Trigger: AGGGCAGCTCCATTGTTCTCAATGCAAAGCTTTACT...GTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR TCA 90 bp TTGAATGCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTGGGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LNATRSVGGCGQISAAMWAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...CCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR GCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATATCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNIGGSR*GSSLAY
Trigger: GTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGAT...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAATCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTIGGSR*GSSLAY
Trigger: GTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGAT...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CAGGAGGAAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATAAGCCAGACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QEEVLFLGHSPPSGECPDKPDLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTCTGGCTT...ATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTTCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGAGTGGATTCTCTGGTaGAGAATGAGGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHEWILW*RMRLFF
Trigger: GAAGAAGAGCCTCATTCTGCACCAGAGAATCCACTC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCTTGCCCAGGCTGGAGTaGAATGGCGCGATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFLPRLE*NGAILA
Trigger: AGCCAGGATCGCGCCATTGCACTCCAGCCTGGGCAA...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACTGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHCLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGGTCTCTCCCCTGAATaGCGCCTTAGATGTATAATT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLGLSPE*RLRCII
Trigger: AATTATACATCTAAGGCGCCATTCAGGGGAGAGACC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCAGGCCGCTAGGAGATaGCACAGGAACGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPQAARR*HRNEPF
Trigger: GAAGGGCTCGTTCCTGTGTCATCTCCTAGCGGCCTG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGTTTCATTTCCCCACTaGCTTGCCAAAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHVSFPH*LAKTCH
Trigger: ATGGCAAGTTTTGGCAAGTCAGTGGGGAAATGAAAC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGAATGAGGTTTCTGTTTaGACCGAAGACCTTACCACA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLNEVSV*TEDLTT
Trigger: TGTGGTAAGGTCTTCGGTTCAAACAGAAACCTCATT...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGGTTTGAGCGGTAACTaGAGACCTTCCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRGLSGN*RPSHSH
Trigger: ATGACTGTGGGAAGGTCTTCAGTTACCGCTCAAACC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCTTGACAAGCCAGACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KCCSWGTHHLLESVLILDKPDLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTCTGGCTT...GTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGAATGGTTCCGTAAATaGATTAGAAGGCTCGAACGC +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHEWFRK*IRRLER
Trigger: GCGTTCGAGCCTTCTAATGCATTTACGGAACCATTC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCTTGTAAGGGTTCTCTaGACTGTGGAGTCGCTGATG +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRLVRVL*TVESLM
Trigger: CATCAGCGACTCCACAGTGCAGAGAACCCTTACAAG...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCACAGGAGTGAGCCACTaGACCCAGCCCATGTCTACT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTITGVSH*TQPMST
Trigger: AGTAGACATGGGCTGGGTGCAGTGGCTCACTCCTGT...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPLGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLLGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMLGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCTTGACCTGGAACCTCAAGTATaGAGCATCAAAACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KCCSWGTHHLLESVLILDLEPQV*SIKTAV
Trigger: TACTGCTGTTTTGATGCTCCATACTTGAGGTTCCAG...GTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGGTTTCTCCCCTGAATaGTTCCGTAAATGCATTAGA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLGFSPE*FRKCIR
Trigger: TCTAATGCATTTACGGAACCATTCAGGGGAGAAACC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGTCGCCACTTCCAGGGTaGTGGAGCTGTACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMSPLPG*WSCTQV
Trigger: GACCTGGGTACAGCTCCATCACCCTGGAAGTGGCGA...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCAGGCCGCTAGGAGATaGCACAGGAACGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMQAARR*HRNEPF
Trigger: GAAGGGCTCGTTCCTGTGTCATCTCCTAGCGGCCTG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCAGGCCGCTAGGAGATaGCACAGGAACGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRQAARR*HRNEPF
Trigger: GAAGGGCTCGTTCCTGTGTCATCTCCTAGCGGCCTG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACACTTTCAGAAATAGCTaGACCGAAAGTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHTFRNS*TESQAV
Trigger: GACAGCTTGACTTTCGGTTCAGCTATTTCTGAAAGT...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGCCTCTGATGGTCAATaGGGTAAGCATTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRASDGQ*GKHSER
Trigger: TCTCTCAGAATGCTTACCTCATTGACCATCAGAGGC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGGCTTTTCTTCAGAATaGAGCATTTGCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHGFSSE*SICHTH
Trigger: ATGAGTGTGGCAAATGCTTCATTCTGAAGAAAAGCC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCTCACAACAACCCTGTaGGGTAGGTATCATGTCAAC +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRLTTTL*GRYHVN
Trigger: GTTGACATGATACCTACCTCACAGGGTTGTTGTGAG...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGACTGGAACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHDWNLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTTCCAGTC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTACAGGAGTGAGCCACTaGACCCAGCCCATGTCTACT +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFTGVSH*TQPMST
Trigger: AGTAGACATGGGCTGGGTGCAGTGGCTCACTCCTGT...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRLGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACTGGAACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHWNLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTTCCA...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCAATCTTGGACTCATTaGTGTTTTGTAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLQSWTH*CFVAKR
Trigger: TCTCTTGGCTACAAAACACCAATGAGTCCAAGATTG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCTTGTCTCGAACTCCTaGGCTCAAGGGATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVLVSNS*AQGIFP
Trigger: TGGGAAGATCCCTTGAGCCCAGGAGTTCGAGACAAG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTCGCCACTTCCAGGGTaGTGGAGCTGTACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNSPLPG*WSCTQV
Trigger: GACCTGGGTACAGCTCCATCACCCTGGAAGTGGCGA...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCAGGCCGCTAGGAGATaGCACAGGAACGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNQAARR*HRNEPF
Trigger: GAAGGGCTCGTTCCTGTGTCATCTCCTAGCGGCCTG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGTTTCATTTCCCCACTaGCTTGCCAAAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRVSFPH*LAKTCH
Trigger: ATGGCAAGTTTTGGCAAGTCAGTGGGGAAATGAAAC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCAGAAGGCTCGAACGCTaGATAAAGCCTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRRRLER*IKPFPH
Trigger: ATGTGGAAAAGGCTTTATTCAGCGTTCGAGCCTTCT...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGTGTGTATGGAGTTTCTaGTGGACCATAAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLCVWSF*WTIKLL
Trigger: CAAAAGTTTTATGGTCCATCAGAAACTCCATACACA...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACAATGAGGTTTCTGTTTaGACTGAAAGCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHNEVSV*TESSST
Trigger: TGTGGAAGAGCTTTCAGTTCAAACAGAAACCTCATT...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAAATCCTGACCTCAGGTaGTCCACTCGCTTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKNPDLR*STRFGL
Trigger: GAGGCCGAAGCGAGTGGATCACCTGAGGTCAGGATT...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGCCCAACTCCACACCTaGCATTCTGGATCATACTGT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVAQLHT*HSGSYC
Trigger: ACAGTATGATCCAGAATGTCAGGTGTGGAGTTGGGC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGCCCAACTCCACACCTaGCATTCTGGATCATACTGT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIAQLHT*HSGSYC
Trigger: ACAGTATGATCCAGAATGTCAGGTGTGGAGTTGGGC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGGGGGTAATGGGCACTaGCTGCCCACAAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCGGNGH*LPTSGF
Trigger: GAATCCACTTGTGGGCAGTCAGTGCCCATTACCCCC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGGGGGGTAATGGGCACTaGCTGCCCACAAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLGGNGH*LPTSGF
Trigger: GAATCCACTTGTGGGCAGTCAGTGCCCATTACCCCC...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGCCCAGAGAAACAACTaGGCTTTCCAGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKAQRNN*AFQAPV
Trigger: GACTGGGGCCTGGAAAGCTCAGTTGTTTCTCTGGGC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396058.1
ENST00000627845.1
CDS-3UTR GCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACTCCTTTATGAGAGTCTaGTCTTTGAGAACTACTTGG +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHSFMRV*SLRTTW
Trigger: CCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAGGA...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGGGATTACCGGTGTGTaGCCCCATGCCCGGATAATT +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLGITGV*PHARII
Trigger: AATTATCCGGGCATGGGGGCACACACCGGTAATCCC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNILGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCTTGGTGCGTGCTTCTaGTCTCAGCCACCGGCGACA +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYLGACF*SQPPAT
Trigger: TGTCGCCGGTGGCTGAGACCAGAAGCACGCACCAAG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGTGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGTTGAAGATGAAGGTTaGAAGTCTGAGAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLVEDEG*KSERIL
Trigger: AAGAATTCTCTCAGACTTCCAACCTTCATCTTCAAC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTCTCAAGGGCACAGAATaGTTCACAGGGGGTAATGGG +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSLKGTE*FTGGNG
Trigger: CCCATTACCCCCTGTGAACCATTCTGTGCCCTTGAG...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTCAAGGGCACAGAATaGTTCACAGGGGGTAATGGG +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLKGTE*FTGGNG
Trigger: CCCATTACCCCCTGTGAACCATTCTGTGCCCTTGAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCGAGTGTCCTGATCCTTaGCAAGGACTGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSECPDP*QGLEPQ
Trigger: TTGAGGTTCCAGTCCTTGTCAAGGATCAGGACACTC...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR TCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGAGTGTCCTGATCCTTaGCAAGGACTGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPECPDP*QGLEPQ
Trigger: TTGAGGTTCCAGTCCTTGTCAAGGATCAGGACACTC...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTCCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTCAGGCCGCTAGGAGATaGCACAGGAACGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFQAARR*HRNEPF
Trigger: GAAGGGCTCGTTCCTGTGTCATCTCCTAGCGGCCTG...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGAGTGTCCTGATCCTTaGCAAGGACTGGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVECPDP*QGLELV
Trigger: TACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGAGTGTCCTGATCCTTaGCAAGGACTGGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIECPDP*QGLELV
Trigger: TACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTCTGTGTGGACTCTCTaGTGTAAGAGGAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTISVWTL*CKRRLL
Trigger: CAAAAGCCTCCTCTTACATCAGAGAGTCCACACAGA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTCTGTGTGGACTCTCTaGTGTAAGAGGAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVSVWTL*CKRRLL
Trigger: CAAAAGCCTCCTCTTACATCAGAGAGTCCACACAGA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGGCTTTTCTTCAGAATaGAGCATTTGCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRGFSSE*SICHTH
Trigger: ATGAGTGTGGCAAATGCTTCATTCTGAAGAAAAGCC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATAAATCCTGACCTCAGGTaGTCCACTCGCTTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSINPDLR*STRFGL
Trigger: GAGGCCGAAGCGAGTGGATCACCTGAGGTCAGGATT...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGCCCAACTCCACACCTaGCATTCTGGATCATACTGT +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPAQLHT*HSGSYC
Trigger: ACAGTATGATCCAGAATGTCAGGTGTGGAGTTGGGC...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCACTGGCTTAATCAGTaGAGAGCTTGGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFHWLNQ*RAWLHV
Trigger: CACATGGAGCCAAGCTCTTCACTGATTAAGCCAGTG...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGAAGGATATATGGGTTaGCTACAGGTTTCGACCATT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVREGYMG*LQVSTI
Trigger: AATGGTCGAAACCTGTAGGCAACCCATATATCCTTC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGAGTGGATTCTCTGGTaGAGAATGAGGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIEWILW*RMRLFF
Trigger: GAAGAAGAGCCTCATTCTGCACCAGAGAATCCACTC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGGGGATTACCGGTGTGTaGCCCCATGCCCGGATAATT +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLGITGV*PHARII
Trigger: AATTATCCGGGCATGGGGGCACACACCGGTAATCCC...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCAACAGGAGTGAGCCACTaGACCCAGCCCATGTCTACT +
Preference number: 4 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTATGVSH*TQPMST
Trigger: AGTAGACATGGGCTGGGTGCAGTGGCTCACTCCTGT...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRCLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGACTGTACACAACGGTaGGAACAGAAGCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSDCTQR*EQKPDL
Trigger: CAAGTCTGGCTTCTGTTCCCACCGTTGTGTACAGTC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAACAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCAGTACAAGGCCCTCTaGATTGGGCCCAGACATGCC +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIQYKAL*IGPRHA
Trigger: GGCATGTCTGGGCCCAATCCAGAGGGCCTTGTACTG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCTTGTCTCGAACTCCTaGGCTCAAGGGATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHLVSNS*AQGIFP
Trigger: TGGGAAGATCCCTTGAGCCCAGGAGTTCGAGACAAG...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPLSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGAGTGTCCTGATCCTTaGCAAGGACTGGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSECPDP*QGLELV
Trigger: TACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCAGAAGGCTCGAACGCTaGATAAAGCCTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIRRLER*IKPFPH
Trigger: ATGTGGAAAAGGCTTTATTCAGCGTTCGAGCCTTCT...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCGCCTCTGATGGTCAATaGGGTAAGCATTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFASDGQ*GKHSER
Trigger: TCTCTCAGAATGCTTACCTCATTGACCATCAGAGGC...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCAATGAGGTTTCTGTTTaGACTGAAAGCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRNEVSV*TESSST
Trigger: TGTGGAAGAGCTTTCAGTTCAAACAGAAACCTCATT...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTCACAACAACCCTGTaGGGTAGGTATCATGTCAAC +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFLTTTL*GRYHVN
Trigger: GTTGACATGATACCTACCTCACAGGGTTGTTGTGAG...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTCACAACAACCCTGTaGGGTAGGTATCATGTCAAC +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLTTTL*GRYHVN
Trigger: GTTGACATGATACCTACCTCACAGGGTTGTTGTGAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCCATCAAGGTCTTTCTaGAGCTCCTCTACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIPSRSF*SSSTRA
Trigger: GGCCCTGGTAGAGGAGCTGCAGAAAGACCTTGATGG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTCCTTTATGAGAGTCTaGTCTTTGAGAACTACTTGG +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRSFMRV*SLRTTW
Trigger: CCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAGGA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGAATGGTTCCGTAAATaGATTAGAAGGCTCGAACGC +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIEWFRK*IRRLER
Trigger: GCGTTCGAGCCTTCTAATGCATTTACGGAACCATTC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCAAAGCAGGGTACCACTaGCCTTCCATTTTGACACTC +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFKAGYH*PSILTL
Trigger: GAGTGTCAAAATGGAAGGGCAGTGGTACCCTGCTTT...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGTAATGGGCACTGACTaGCCACAAGTGGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLVMGTD*PQVDSA
Trigger: TGCAGAATCCACTTGTGGGCAGTCAGTGCCCATTAC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTTTCTTCCTTACAGCTTaGAGAGTATCATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPFFLTA*RVSSGA
Trigger: AGCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAA...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTTCTTCCTTACAGCTTaGAGAGTATCATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSFFLTA*RVSSGA
Trigger: AGCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCTGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFCLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSIPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCCAGGATCTGTGCCTTaGTGCGTGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNPGSVP*CVLLVS
Trigger: TGAGACCAGAAGCACGCACCAAGGCACAGATCCTGG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLNITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAACCTCATTCTCGGTCATaGTCTCCCATTCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKPHSRS*SPILGR
Trigger: CCTCCCTAGAATGGGAGACCATGACCGAGAATGAGG...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCTTAATAACATCACATaGCCATTAAGGGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRLNNIT*PLRESQ
Trigger: CTGGCTTTCCCTTAATGGCCATGTGATGTTATTAAG...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTGACTGCCCACAAGTaGATTCTGCACTGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLTAHK*ILHWLN
Trigger: ATTAAGCCAGTGCAGAATCCACTTGTGGGCAGTCAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAACCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACGATCCCTCCTCCATTaGATTGCTTTTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTRSLLH*IAFAPV
Trigger: GACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCLSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLLSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCGAGTGTCCTGATCCTTaGCAAGGACTGGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPECPDP*QGLELV
Trigger: TACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTC...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTGGGGAACACTTCCTTaGAGTCTTTTTGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIWGTLP*SLFDVP
Trigger: AGGAACATCAAAAAGACTTCAAGGAAGTGTTCCCCA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTGGGGAACACTTCCTTaGAGTCTTTTTGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVWGTLP*SLFDVP
Trigger: AGGAACATCAAAAAGACTTCAAGGAAGTGTTCCCCA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCAATGAGGTTTCTGTTTaGACCGAAGACCTTACCACA +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTINEVSV*TEDLTT
Trigger: TGTGGTAAGGTCTTCGGTTCAAACAGAAACCTCATT...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTGTGTATGGAGTTTCTaGTGGACCATAAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRCVWSF*WTIKLL
Trigger: CAAAAGTTTTATGGTCCATCAGAAACTCCATACACA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGGCTTTTCTTCAGAATaGAGCATTTGCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVGFSSE*SICHTH
Trigger: ATGAGTGTGGCAAATGCTTCATTCTGAAGAAAAGCC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGCCCAACTCCACACCTaGCATTCTGGATCATACTGT +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKAQLHT*HSGSYC
Trigger: ACAGTATGATCCAGAATGTCAGGTGTGGAGTTGGGC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACCCTGTAACCTGGCAATaGGGTCCAAGAAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHPVTWQ*GPRSLI
Trigger: AATCAAGCTTCTTGGACCTCATTGCCAGGTTACAGG...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGACTGGAACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVDWNLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTTCCAGTC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCATTTCCCCACTGACTTaGCAAAACTTGCCATTCACA +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVISPLT*QNLPFT
Trigger: TGTGAATGGCAAGTTTTGGCAAGTCAGTGGGGAAAT...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGAGTGGATTCTCTGGTaGAGAATGAGGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSEWILW*RMRLFF
Trigger: GAAGAAGAGCCTCATTCTGCACCAGAGAATCCACTC...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCTTGTAAGGGTTCTCTaGACTGTGGAGTCGCTGATG +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMLVRVL*TVESLM
Trigger: CATCAGCGACTCCACAGTGCAGAGAACCCTTACAAG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATAAAGCAGGGTACCACTaGCCTTCCATTTTGACACTC +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHKAGYH*PSILTL
Trigger: GAGTGTCAAAATGGAAGGGCAGTGGTACCCTGCTTT...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATTTCTTCCTTACAGCTTaGAGAGTATCATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHFFLTA*RVSSGA
Trigger: AGCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAA...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTTCTTCCTTACAGCTTaGAGAGTATCATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPFFLTA*RVSSGA
Trigger: AGCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVCLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPCLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGGACTGTACACAACGGTaGGAACAGAAGCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRDCTQR*EQKPDL
Trigger: CAAGTCTGGCTTCTGTTCCCACCGTTGTGTACAGTC...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATAACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSITNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYTNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTACCAACTCCTGGGGCTaGGCTGTTAGGAGCATAAGT +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNITNSWG*AVRSIS
Trigger: ACTTATGCTCCTAACAGCCCAGCCCCAGGAGTTGGT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTAACATCACCAACTCCTaGGGCTGGGCTGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VDSTMNILLCLPDLSIHINITNS*GWAVRS
Trigger: GCTCCTAACAGCCCAGCCCCAGGAGTTGGTGATGTT...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTGGAACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIWNLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTTCCA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGTTGAAGATGAAGGTTaGAAGTCTGAGAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRVEDEG*KSERIL
Trigger: AAGAATTCTCTCAGACTTCCAACCTTCATCTTCAAC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTTCTTCCTTACAGCTTaGAGAGTATCATCTACAAGA +
Preference number: 4 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRFFLTA*RVSSTR
Trigger: TCTTGTAGATGATACTCTCCAAGCTGTAAGGAAGAA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396058.1
ENST00000627845.1
CDS-3UTR TCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLFWRVS*SLTRTG
Trigger: TCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAA...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGCAGGAGAATCATGCTaGGGATCCTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNAGESC*GSWRLN
Trigger: ATTCAACCTCCAGGATCCTCAGCATGATTCTCCTGC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAACCCATTCCTCTGAAGTaGAGCATACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKPIPLK*SILTPP
Trigger: AGGAGGTGTCAGTATGCTTCACTTCAGAGGAATGGG...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSILSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCTCAGTCCTAGGTCCTaGAGTTGTTGGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLLSPRS*SCWFTA
Trigger: GGCAGTAAACCAACAACTTCAGGACCTAGGACTGAG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTGGGGAACACTTCCTTaGAGTCTTTTTGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSWGTLP*SLFDVP
Trigger: AGGAACATCAAAAAGACTTCAAGGAAGTGTTCCCCA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGGCTCTTCTTCAGAATaGAAGCTTTCTGACACTTAT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVGSSSE*KLSDTY
Trigger: ATAAGTGTCAGAAAGCTTTCATTCTGAAGAAGAGCC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCATGTACAAGCAGGCTTaGATTGTAACTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIMYKQA*IVTESL
Trigger: AAGGCTTTCAGTTACAATTCAAGCCTGCTTGTACAT...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAAGGTTTGAGCGGTAACTaGAGACCTTCCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKGLSGN*RPSHSH
Trigger: ATGACTGTGGGAAGGTCTTCAGTTACCGCTCAAACC...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATACTGCCCTTCCATTTTaGCACTCTCCATCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHTALPF*HSPSVK
Trigger: CTTAACAGATGGAGAGTGTCAAAATGGAAGGGCAGT...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTGAGCTTGGCTCCATGTaGAAAATTTATGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFELGSM*KIYVPV
Trigger: TACTGGGACATAAATTTTTCACATGGAGCCAAGCTC...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTCTCCTGTTTAACAGATaGGGAATTCAAGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSLLFNR*GIQGSK
Trigger: CTTGGAGCCTTGAATTCCTCATCTGTTAAACAGGAG...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTCAGCTGCTATGTGGCTaGCAGGAAGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFQLLCG*QEVQEE
Trigger: TTCCTCCTGTACTTCCTGGCAGCCACATAGCAGCTG...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACAGGTCAGTAGGAGGATaGGGGCAAATTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYRSVGG*GQISAA
Trigger: AGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCT...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGAAGGATATATGGGTTaGCTACAGGTTTCGACCATT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSEGYMG*LQVSTI
Trigger: AATGGTCGAAACCTGTAGGCAACCCATATATCCTTC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGACTGGAACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSDWNLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTTCCAGTC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTCCTTTATGAGAGTCTaGTCTTTGAGAACTACTTGG +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVSFMRV*SLRTTW
Trigger: CCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAGGA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGGAGTGGATTCTCTGGTaGAGAATGAGGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLEWILW*RMRLFF
Trigger: GAAGAAGAGCCTCATTCTGCACCAGAGAATCCACTC...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCTTGTAAGGGTTCTCTaGACTGTGGAGTCGCTGATG +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLLVRVL*TVESLM
Trigger: CATCAGCGACTCCACAGTGCAGAGAACCCTTACAAG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGCCCACAAGTGGATTCTaGACTGGCTTAATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMPTSGF*TGLISE
Trigger: TTCACTGATTAAGCCAGTGCAGAATCCACTTGTGGG...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGTAATGGGCACTGACTaGCCACAAGTGGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNVMGTD*PQVDSA
Trigger: TGCAGAATCCACTTGTGGGCAGTCAGTGCCCATTAC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTEELLP*KLVPHF
Trigger: GAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGTGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLCLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTCCAGACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSPDLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTCTGG...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTGGAACCTCAAGTATaGAGCATCAAAACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLEPQV*SIKTAV
Trigger: TACTGCTGTTTTGATGCTCCATACTTGAGGTTCCAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTATCCTTGACAAGGACTaGAACCTCAAGTATGGAGCA +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSILDKD*NLKYGA
Trigger: TGCTCCATACTTGAGGTTCCAGTCCTTGTCAAGGAT...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCATCCTTGACAAGGACTaGAACCTCAAGTATGGAGCA +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLILDKD*NLKYGA
Trigger: TGCTCCATACTTGAGGTTCCAGTCCTTGTCAAGGAT...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTCCTCATTCTCGGTCATaGTCTCCCATTCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFPHSRS*SPILGR
Trigger: CCTCCCTAGAATGGGAGACCATGACCGAGAATGAGG...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGTGTGGATTCTCCGATaGTTTATAAGATGGGAGATT +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVVWILR*FIRWEI
Trigger: AATCTCCCATCTTATAAACCATCGGAGAATCCACAC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGGTTTCTCCCCTGAATaGTTCCGTAAATGCATTAGA +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSGFSPE*FRKCIR
Trigger: TCTAATGCATTTACGGAACCATTCAGGGGAGAAACC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATGGTCTCTCCCCTGAATaGCGCCTTAGATGTATAATT +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHGLSPE*RLRCII
Trigger: AATTATACATCTAAGGCGCCATTCAGGGGAGAGACC...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCAATCTTGGACTCATTaGTGTTTTGTAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVQSWTH*CFVAKR
Trigger: TCTCTTGGCTACAAAACACCAATGAGTCCAAGATTG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCTTAATAACATCACATaGCCATTAAGGGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVLNNIT*PLRESQ
Trigger: CTGGCTTTCCCTTAATGGCCATGTGATGTTATTAAG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTTACATCACAGAAGGTaGCACATTATGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPLHHRR*HIMWAV
Trigger: GACAGCCCACATAATGTGCCACCTTCTGTGATGTAA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGAGTGTCCTGATCCTTaGCAAGGACTGGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNECPDP*QGLELV
Trigger: TACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGAGTGTCCTGATCCTTaGCAAGGACTGGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTECPDP*QGLELV
Trigger: TACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGTTTCATTTCCCCACTaGCTTGCCAAAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKVSFPH*LAKTCH
Trigger: ATGGCAAGTTTTGGCAAGTCAGTGGGGAAATGAAAC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCAGAAGGCTCGAACGCTaGATAAAGCCTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCRRLER*IKPFPH
Trigger: ATGTGGAAAAGGCTTTATTCAGCGTTCGAGCCTTCT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCAAGAAGGCTCGAACGCTaGATAAAGCCTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTARRLER*IKPFPH
Trigger: ATGTGGAAAAGGCTTTATTCAGCGTTCGAGCCTTCT...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACGCCTCTGATGGTCAATaGGGTAAGCATTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYASDGQ*GKHSER
Trigger: TCTCTCAGAATGCTTACCTCATTGACCATCAGAGGC...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGGCTCTTCTTCAGAATaGAAGCTTTCTGACACTTAT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSGSSSE*KLSDTY
Trigger: ATAAGTGTCAGAAAGCTTTCATTCTGAAGAAGAGCC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCAACTGCCCTTCCATTTTaGCACTCTCCATCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTATALPF*HSPSVK
Trigger: CTTAACAGATGGAGAGTGTCAAAATGGAAGGGCAGT...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATGAGCTTGGCTCCATGTaGAAAATTTATGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHELGSM*KIYVPV
Trigger: TACTGGGACATAAATTTTTCACATGGAGCCAAGCTC...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCCTGTAACCTGGCAATaGGGTCCAAGAAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYPVTWQ*GPRSLI
Trigger: AATCAAGCTTCTTGGACCTCATTGCCAGGTTACAGG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCAGGGCAGCTTTCTTATaGAATATTCCACGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPRAAFL*NIPRSG
Trigger: TCCAGAACGTGGAATATTGCATAAGAAAGCTGCCCT...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCTGCATTTCCCTCATaGCTAATGATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSSAFPS*LMMLNI
Trigger: GATGTTCAACATCATTAGGCATGAGGGAAATGCAGA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACGAAGGATATATGGGTTaGCTACAGGTTTCGACCATT +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHEGYMG*LQVSTI
Trigger: AATGGTCGAAACCTGTAGGCAACCCATATATCCTTC...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCGAAGGATATATGGGTTaGCTACAGGTTTCGACCATT +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPEGYMG*LQVSTI
Trigger: AATGGTCGAAACCTGTAGGCAACCCATATATCCTTC...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCGACTGGAACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPDWNLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTTCCAGTC...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACATTTCCCCACTGACTTaGCAAAACTTGCCATTCACA +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHISPLT*QNLPFT
Trigger: TGTGAATGGCAAGTTTTGGCAAGTCAGTGGGGAAAT...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCATTTCCCCACTGACTTaGCAAAACTTGCCATTCACA +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLISPLT*QNLPFT
Trigger: TGTGAATGGCAAGTTTTGGCAAGTCAGTGGGGAAAT...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTTGTGTAACCACCACTaGAATCAAGATACACAAGTG +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSLCNHH*NQDTQV
Trigger: CACTTGTGTATCTTGATTGCAGTGGTGGTTACACAA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTCTTCCTTACAGCTTaGAGAGTATCATCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNFFLTA*RVSSGA
Trigger: AGCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAA...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLCLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTTGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLCLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTCLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTTGTCTAAAGTGTAGGTaGGAGGTCTCCCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNICLKCR*EVSQTE
Trigger: CTCTGTTTGGGAGACCTCCCACCTACACTTTAGACA...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTATTTCAGCTGCTATGTaGCTGCCAGGAAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIISAAM*LPGSTG
Trigger: TCCTGTACTTCCTGGCAGCCACATAGCAGCTGAAAT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTGGAACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPWNLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTTCCA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGGTCTCTCCCCTGAATaGCGCCTTAGATGTATAATT +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKGLSPE*RLRCII
Trigger: AATTATACATCTAAGGCGCCATTCAGGGGAGAGACC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCTGACTGCCCACAAGTaGATTCTGCACTGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNLTAHK*ILHWLN
Trigger: ATTAAGCCAGTGCAGAATCCACTTGTGGGCAGTCAG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAATTACATCACAGAAGGTaGCACATTATGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKLHHRR*HIMWAV
Trigger: GACAGCCCACATAATGTGCCACCTTCTGTGATGTAA...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTAGTAAAGCTTTGCATTaGGAACAATGGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNISKALH*EQWSCP
Trigger: AGGGCAGCTCCATTGTTCTCAATGCAAAGCTTTACT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR TCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCTGGGGAACACTTCCTTaGAGTCTTTTTGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCWGTLP*SLFDVP
Trigger: AGGAACATCAAAAAGACTTCAAGGAAGTGTTCCCCA...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAACTTTCAGAAATAGCTaGACCGAAAGTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKTFRNS*TESQAV
Trigger: GACAGCTTGACTTTCGGTTCAGCTATTTCTGAAAGT...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCAAATGAGGTTTCTGTTTaGACCGAAGACCTTACCACA +
Preference number: 4 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTANEVSV*TEDLTT
Trigger: TGTGGTAAGGTCTTCGGTTCAAACAGAAACCTCATT...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAAATGAGGTTTCTGTTTaGACCGAAGACCTTACCACA +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKNEVSV*TEDLTT
Trigger: TGTGGTAAGGTCTTCGGTTCAAACAGAAACCTCATT...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCTGTGTATGGAGTTTCTaGTGGACCATAAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFCVWSF*WTIKLL
Trigger: CAAAAGTTTTATGGTCCATCAGAAACTCCATACACA...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCTCCTGTTTAACAGATaGGGAATTCAAGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNILLFNR*GIQGSK
Trigger: CTTGGAGCCTTGAATTCCTCATCTGTTAAACAGGAG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTTTATATAAGCTGGGATaGTTCAACAACCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPLYKLG*FNNLDE
Trigger: TTCATCCAGGTTGTTGAATCATCCCAGCTTATATAA...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCATTTTGTTACTCGGTaGAGAGGTAAATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPHFVTR*RGKSQH
Trigger: ATGCTGTGATTTACCTCTTCACCGAGTAACAAAATG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCATGTGGACTCAACAATaGACATTTTGCTATGTTTGC +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSMWTQQ*TFCYVC
Trigger: GCAAACATAGCAAAATGTTCATTGTTGAGTCCACAT...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTATGTGGACTCAACAATaGACATTTTGCTATGTTTGC +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSMWTQQ*TFCYVC
Trigger: GCAAACATAGCAAAATGTTCATTGTTGAGTCCACAT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTAGAGTACAGAAGAGTTaGAAGTATGGCACATTGAAT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSRVQKS*KYGTLN
Trigger: ATTCAATGTGCCATACTTTCAACTCTTCTGTACTCT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGAGGGCAGCTTTCTTATaGAATATTCCACGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLRAAFL*NIPRSG
Trigger: TCCAGAACGTGGAATATTGCATAAGAAAGCTGCCCT...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGAGGGCAGCTTTCTTATaGAATATTCCACGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRRAAFL*NIPRSG
Trigger: TCCAGAACGTGGAATATTGCATAAGAAAGCTGCCCT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTGCATTTCCCTCATaGCTAATGATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPSAFPS*LMMLNI
Trigger: GATGTTCAACATCATTAGGCATGAGGGAAATGCAGA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGACTGGAACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCDWNLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTTCCAGTC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGACTGGAACTTGTATTaGTGGTCCATCAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKDWNLY*WSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTTCCAGTC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTTGTGTAACCACCACTaGAATCAAGATACACAAGTG +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLLCNHH*NQDTQV
Trigger: CACTTGTGTATCTTGATTGCAGTGGTGGTTACACAA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGAGAATCACAGGAAGTTaGAAAGATAGCACCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRRITGS*KDSTLH
Trigger: GTGAAGGGTGCTATCTTTGCAACTTCCTGTGATTCT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCATGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTACLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAATACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKYFLGS*FPISRY
Trigger: ATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTA...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCCAGACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNPDLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTCTGG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTTGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCTGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCATGGAACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTAWNLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTTCCA...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGTGGAACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRWNLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTTCCA...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGTGTGGATTCTCCGATaGTTTATAAGATGGGAGATT +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSVWILR*FIRWEI
Trigger: AATCTCCCATCTTATAAACCATCGGAGAATCCACAC...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGGTCTCTCCCCTGAATaGCGCCTTAGATGTATAATT +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNGLSPE*RLRCII
Trigger: AATTATACATCTAAGGCGCCATTCAGGGGAGAGACC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTGAAGAGTTGAAAGTATaGCACATTGAATACCCGTAT +
Preference number: 4 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFEELKV*HIEYPY
Trigger: ATACGGGTATTCAATGTGCCATACTTTCAACTCTTC...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGAAGAGTTGAAAGTATaGCACATTGAATACCCGTAT +
Preference number: 4 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPEELKV*HIEYPY
Trigger: ATACGGGTATTCAATGTGCCATACTTTCAACTCTTC...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTTCTTCCTTACAGCTTaGAGAGTATCATCTACAAGA +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSFFLTA*RVSSTR
Trigger: TCTTGTAGATGATACTCTCCAAGCTGTAAGGAAGAA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383745.6
ENST00000627752.2
CDS-3UTR TCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTGTTTCATTTCCCCACTaGCTTGCCAAAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFVSFPH*LAKTCH
Trigger: ATGGCAAGTTTTGGCAAGTCAGTGGGGAAATGAAAC...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGGCTCTTCTTCAGAATaGAAGCTTTCTGACACTTAT +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMGSSSE*KLSDTY
Trigger: ATAAGTGTCAGAAAGCTTTCATTCTGAAGAAGAGCC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTGTGTATGGAGTTTCTaGTGGACCATAAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPCVWSF*WTIKLL
Trigger: CAAAAGTTTTATGGTCCATCAGAAACTCCATACACA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGATGTACAAGCAGGCTTaGATTGTAACTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLMYKQA*IVTESL
Trigger: AAGGCTTTCAGTTACAATTCAAGCCTGCTTGTACAT...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAATGTACAAGCAGGCTTaGATTGTAACTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKMYKQA*IVTESL
Trigger: AAGGCTTTCAGTTACAATTCAAGCCTGCTTGTACAT...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGATGTACAAGCAGGCTTaGATTGTAACTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRMYKQA*IVTESL
Trigger: AAGGCTTTCAGTTACAATTCAAGCCTGCTTGTACAT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCAATGAGGTTTCTGTTTaGACTGAAAGCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCNEVSV*TESSST
Trigger: TGTGGAAGAGCTTTCAGTTCAAACAGAAACCTCATT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGTTATATAAGCTGGGATaGTTCAACAACCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMLYKLG*FNNLDE
Trigger: TTCATCCAGGTTGTTGAATCATCCCAGCTTATATAA...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCATTTTGTTACTCGGTaGAGAGGTAAATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRHFVTR*RGKSQH
Trigger: ATGCTGTGATTTACCTCTTCACCGAGTAACAAAATG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTATGTGGACTCAACAATaGACATTTTGCTATGTTTGC +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSMWTQQ*TFCYVC
Trigger: GCAAACATAGCAAAATGTTCATTGTTGAGTCCACAT...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGGGCAGCTTTCTTATaGAATATTCCACGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTRAAFL*NIPRSG
Trigger: TCCAGAACGTGGAATATTGCATAAGAAAGCTGCCCT...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTAGGGCAGCTTTCTTATaGAATATTCCACGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLRAAFL*NIPRSG
Trigger: TCCAGAACGTGGAATATTGCATAAGAAAGCTGCCCT...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTCCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGTCTGCATTTCCCTCATaGCTAATGATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRSAFPS*LMMLNI
Trigger: GATGTTCAACATCATTAGGCATGAGGGAAATGCAGA...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGTCTGCATTTCCCTCATaGCTAATGATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLSAFPS*LMMLNI
Trigger: GATGTTCAACATCATTAGGCATGAGGGAAATGCAGA...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACGTTTCTCTTCATCCTTaGCAGCAGTTACCACCATTA +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYVSLHP*QQLPPL
Trigger: TAATGGTGGTAACTGCTGGCAAGGATGAAGAGAAAC...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTGAATGGTTCCGTAAATaGATTAGAAGGCTCGAACGC +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFEWFRK*IRRLER
Trigger: GCGTTCGAGCCTTCTAATGCATTTACGGAACCATTC...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTCCCACAAGTGGATTCTaGACTGGCTTAATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VDSTMNILLCLPDLSIHIPTSGF*TGLISE
Trigger: TTCACTGATTAAGCCAGTGCAGAATCCACTTGTGGG...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATAGAATCACAGGAAGTTaGAAAGATAGCACCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNRITGS*KDSTLH
Trigger: GTGAAGGGTGCTATCTTTGCAACTTCCTGTGATTCT...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTTGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNICLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNCLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACTGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYCLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATATGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSICLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACTGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATTGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSKFSFL*DKCSEV
Trigger: CACTTCTGAGCATTTATCCCAGAGAAATGAAAACTT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATGGAACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTWNLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTTCCA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTTGGAACTTGTATTGCTaGTCCATCAAGGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLWNLYC*SIKVFL
Trigger: CAGAAAGACCTTGATGGACCAGCAATACAAGTTCCA...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATGTTGAAGATGAAGGTTaGAAGTCTGAGAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHVEDEG*KSERIL
Trigger: AAGAATTCTCTCAGACTTCCAACCTTCATCTTCAAC...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAACTTAATAACATCACATaGCCATTAAGGGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKLNNIT*PLRESQ
Trigger: CTGGCTTTCCCTTAATGGCCATGTGATGTTATTAAG...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCCCACAAAGACCTTTCTaGTGCTACCTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLPQRPF*CYLLIV
Trigger: AACTATTAAAAGGTAGCACCAGAAAGGTCTTTGTGG...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGCCACAAAGACCTTTCTaGTGCTACCTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMPQRPF*CYLLIV
Trigger: AACTATTAAAAGGTAGCACCAGAAAGGTCTTTGTGG...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTTCTTCCTTACAGCTTaGAGAGTATCATCTACAAGA +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPFFLTA*RVSSTR
Trigger: TCTTGTAGATGATACTCTCCAAGCTGTAAGGAAGAA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383745.6
ENST00000627752.2
3UTR CAA 72 bp GTACAGTATGTGTGTATAGGTATAGCACCTATAGATTaGTGTAACCACCACTGCAATCAAGATACACAAGTG +
Preference number: 4 (lower is better)
Translates to: VQYVCIGIAPID*CNHHCNQDTQV
Trigger: CACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGCTATACCTATACACACATACTGTAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATATTCCCAGCAATGTATaGGATCCTGTTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNIPSNV*DPVSLH
Trigger: ATGAAGAGAAACAGGATCTCATACATTGCTGGGAAT...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGCAATTCCTGAAGCATaGCATATACATGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTAIPEA*HIHVWF
Trigger: AAACCACACATGTATATGTCATGCTTCAGGAATTGC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACAATGAGGTTTCTGTTTaGACTGAAAGCTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYNEVSV*TESSST
Trigger: TGTGGAAGAGCTTTCAGTTCAAACAGAAACCTCATT...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTGGCTTTTCTTCAGAATaGAGCATTTGCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: VDSTMNILLCLPDLSIHIGFSSE*SICHTH
Trigger: ATGAGTGTGGCAAATGCTTCATTCTGAAGAAAAGCC...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR TCA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGATGTGGACTCAACAATaGACATTTTGCTATGTTTGC +
Preference number: 4 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRMWTQQ*TFCYVC
Trigger: GCAAACATAGCAAAATGTTCATTGTTGAGTCCACAT...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGAGAGTACAGAAGAGTTaGAAGTATGGCACATTGAAT +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMRVQKS*KYGTLN
Trigger: ATTCAATGTGCCATACTTTCAACTCTTCTGTACTCT...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTCCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATCTGCATTTCCCTCATaGCTAATGATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTSAFPS*LMMLNI
Trigger: GATGTTCAACATCATTAGGCATGAGGGAAATGCAGA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACTCTGCATTTCCCTCATaGCTAATGATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYSAFPS*LMMLNI
Trigger: GATGTTCAACATCATTAGGCATGAGGGAAATGCAGA...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAATCTGCATTTCCCTCATaGCTAATGATGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKSAFPS*LMMLNI
Trigger: GATGTTCAACATCATTAGGCATGAGGGAAATGCAGA...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAATCCTTTATGAGAGTCTaGTCTTTGAGAACTACTTGG +
Preference number: 4 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKSFMRV*SLRTTW
Trigger: CCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAGGA...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACTTGTGTAACCACCACTaGAATCAAGATACACAAGTG +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYLCNHH*NQDTQV
Trigger: CACTTGTGTATCTTGATTGCAGTGGTGGTTACACAA...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTAGAATCACAGGAAGTTaGAAAGATAGCACCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFRITGS*KDSTLH
Trigger: GTGAAGGGTGCTATCTTTGCAACTTCCTGTGATTCT...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTTGTCTCAGAGCATTGTaGGCTACATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VDSTMNILLCLPDLSIHICLRAL*ATFSLV
Trigger: GACAAGAGAAAATGTAGCCCACAATGCTCTGAGACA...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPKFSFL*DKCSEV
Trigger: CACTTCTGAGCATTTATCCCAGAGAAATGAAAACTT...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTGGTTTCTCCCCTGAATaGTTCCGTAAATGCATTAGA +
Preference number: 4 (lower is better)
Translates to: VDSTMNILLCLPDLSIHIGFSPE*FRKCIR
Trigger: TCTAATGCATTTACGGAACCATTCAGGGGAGAAACC...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGTTGAAGATGAAGGTTaGAAGTCTGAGAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMVEDEG*KSERIL
Trigger: AAGAATTCTCTCAGACTTCCAACCTTCATCTTCAAC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACAATCTTGGACTCATTaGTGTTTTGTAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTQSWTH*CFVAKR
Trigger: TCTCTTGGCTACAAAACACCAATGAGTCCAAGATTG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACTTAATAACATCACATaGCCATTAAGGGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSILNNIT*PLRESQ
Trigger: CTGGCTTTCCCTTAATGGCCATGTGATGTTATTAAG...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGAAGAGTTGAAAGTATaGCACATTGAATACCCGTAT +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMEELKV*HIEYPY
Trigger: ATACGGGTATTCAATGTGCCATACTTTCAACTCTTC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGGAAGAGTTGAAAGTATaGCACATTGAATACCCGTAT +
Preference number: 4 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLEELKV*HIEYPY
Trigger: ATACGGGTATTCAATGTGCCATACTTTCAACTCTTC...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAATTCTTCCTTACAGCTTaGAGAGTATCATCTACAAGA +
Preference number: 4 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKFFLTA*RVSSTR
Trigger: TCTTGTAGATGATACTCTCCAAGCTGTAAGGAAGAA...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396058.1
ENST00000627845.1
CDS-3UTR TCA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATATAAGTGCCATTAATTaGTTTCTTGGGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAENGIINSQQTQDSLNNISAIN*FLGFSS
Trigger: GGAAGAGAACCCAAGAAATCAATTAATGGCACTTAT...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR TCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATAAGAGTACAGAAGAGTTaGAAGTATGGCACATTGAAT +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSIRVQKS*KYGTLN
Trigger: ATTCAATGTGCCATACTTTCAACTCTTCTGTACTCT...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR TCA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTAGAGTACAGAAGAGTTaGAAGTATGGCACATTGAAT +
Preference number: 4 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIRVQKS*KYGTLN
Trigger: ATTCAATGTGCCATACTTTCAACTCTTCTGTACTCT...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTTTGTGTAACCACCACTaGAATCAAGATACACAAGTG +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFLCNHH*NQDTQV
Trigger: CACTTGTGTATCTTGATTGCAGTGGTGGTTACACAA...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATGTGTCTGTTTCTCGTaGTGTCTTTTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTCVCFS*CLLFVP
Trigger: AGGAACAAATAAAAGACACCACGAGAAACAGACACA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMKFSFL*DKCSEV
Trigger: CACTTCTGAGCATTTATCCCAGAGAAATGAAAACTT...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTCAATCTTGGACTCATTaGTGTTTTGTAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFQSWTH*CFVAKR
Trigger: TCTCTTGGCTACAAAACACCAATGAGTCCAAGATTG...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACTATCTTTTAGGTTCCTaGAATCCCCCTCATTCTAAT +
Preference number: 4 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYYLLGS*NPPHSN
Trigger: ATTAGAATGAGGGGGATTCCAGGAACCTAAAAGATA...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTTCCAGTTTTCACTCTTaGCTACCTTTCACTCTAATG +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFSSFHS*LPFTLM
Trigger: CATTAGAGTGAAAGGTAGCCAAGAGTGAAAACTGGA...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTTCCAGTTTTCACTCTTaGCTACCTTTCACTCTAATG +
Preference number: 4 (lower is better)
Translates to: VDSTMNILLCLPDLSIHISSFHS*LPFTLM
Trigger: CATTAGAGTGAAAGGTAGCCAAGAGTGAAAACTGGA...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACCACAAAGACCTTTCTaGTGCTACCTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSIPQRPF*CYLLIV
Trigger: AACTATTAAAAGGTAGCACCAGAAAGGTCTTTGTGG...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCCACAAAGACCTTTCTaGTGCTACCTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLPQRPF*CYLLIV
Trigger: AACTATTAAAAGGTAGCACCAGAAAGGTCTTTGTGG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR GCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR GCA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: YLTILLCISLMPNDVEHLKFSFL*DKCSEV
Trigger: CACTTCTGAGCATTTATCCCAGAGAAATGAAAACTT...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CCA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATAAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FHVDSTMNILLCLPDLSIKFSFL*DKCSEV
Trigger: CACTTCTGAGCATTTATCCCAGAGAAATGAAAACTT...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CCA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTTATCTTTTAGGTTCCTaGAATCCCCCTCATTCTAAT +
Preference number: 4 (lower is better)
Translates to: VDSTMNILLCLPDLSIHIYLLGS*NPPHSN
Trigger: ATTAGAATGAGGGGGATTCCAGGAACCTAAAAGATA...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR GCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTCCATTGAATTGCTTTTaGCCCTGTCAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFPLNCF*PCQKSI
Trigger: AATTGATTTTTGACAGGGGCAAAAGCAATTCAATGG...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CCA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTAAGTTTTCATTTCTCTaGGATAAATGCTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFKFSFL*DKCSEV
Trigger: CACTTCTGAGCATTTATCCCAGAGAAATGAAAACTT...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS TCA 90 bp CTCCAGCCTTGCGTACCGCCGCCTCGGCGCCAGGCCGCTAGGAGATaGCACAGGAACGAGCCCTTCCGGCAGCCGAGGCACAGAATAATG +
Preference number: 5 (lower is better)
Translates to: LQPCVPPPRRQAARR*HRNEPFRQPRHRIM
Trigger: CATTATTCTGTGCCTCGGCTGCCGGAAGGGCTCGTTCCTGTGTCATCTCCTAGCGGCCTGGCGCCGAGGCGGCGGTACGCAAGGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000628172.3
CDS TCA 90 bp ATTGAGAACAATGGAGCTGCCCTCGAGCCCCACTCATGGCACTGGTaGCCTCTCCCAGAGGAGACTGTACACAACGGTGGGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: IENNGAALEPHSWHW*PLPEETVHNGGNRS
Trigger: GCTTCTGTTCCCACCGTTGTGTACAGTCTCCTCTGGGAGAGGTCACCAGTGCCATGAGTGGGGCTCGAGGGCAGCTCCATTGTTCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGCTGCGGCTCCAGCCTaGCGTACCGCCGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPAAAPA*RTAASA
Trigger: CGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAGC...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGGCTGCGGCTCCAGCCTaGCGTACCGCCGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMAAAPA*RTAASA
Trigger: CGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAGC...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS CCA 90 bp GTAGGTGGGAGGTCTCCCAAACAGAGGAGCTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTATCATCCTTCCCCTTCACAAGGCCCT +
Preference number: 5 (lower is better)
Translates to: VGGRSPKQRSYFLGS*FPISRYHPSPSQGP
Trigger: AGGGCCTTGTGAAGGGGAAGGATGATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCTGTTTGGGAGACCTCCCACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000412641.1
ENST00000627004.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGCTGCGGCTCCAGCCTaGCGTACCGCCGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCAAAPA*RTAASA
Trigger: CGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAGC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGGCTGCGGCTCCAGCCTaGCGTACCGCCGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRAAAPA*RTAASA
Trigger: CGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAGC...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACTCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHSRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCCCTCTGGATTGGGCCCAGACATGCCCATTCCTCTGAAGTGAAGCATACTGACGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: ALWIGPRHAHSSEVKHTDAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...GTCAGTATGCTTCACTTCAGAGGAATGGGCATGTCTGGGCCCAATCCAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGCTGCGGCTCCAGCCTaGCGTACCGCCGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: KAENGIINSQQTQDSLNNAAAPA*RTAASA
Trigger: CGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAGC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS TCA 90 bp GGAAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGAACTTGTATTGCTGGTCCATCAAGG +
Preference number: 5 (lower is better)
Translates to: GSVVPGALTTFWRVS*SLTRTGTCIAGPSR
Trigger: CCTTGATGGACCAGCAATACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000628172.3
CDS TCA 90 bp GTTCCTAAGAGGGTCTTGAGTCACGAAAGCGCCAGACCCACATCTTaGACAAAGCGCAGAAGGAACTGCGTCAGCAACTCCCAGCTAACT +
Preference number: 5 (lower is better)
Translates to: VPKRVLSHESARPTS*TKRRRNCVSNSQLT
Trigger: AGTTAGCTGGGAGTTGCTGACGCAGTTCCTTCTGCGCTTTGTTCAAGATGTGGGTCTGGCGCTTTCGTGACTCAAGACCCTCTTAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412641.1
ENST00000627004.1
CDS CCA 90 bp CTCATGGCACTGGTGACCTCTCCCAGAGGAGACTGTACACAACGGTaGGAACAGAAGCCAGACTTGTATTGCTGGTCCATCAAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LMALVTSPRGDCTQR*EQKPDLYCWSIKVF
Trigger: AAAGACCTTGATGGACCAGCAATACAAGTCTGGCTTCTGTTCCCACCGTTGTGTACAGTCTCCTCTGGGAGAGGTCACCAGTGCCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRSRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS TCA 90 bp GGAACCTCAAGTATGGAGCATCAAAACAGCAGTAAAGCTTTGCATTaGGAACAATGGAGCTGCCCTCGAGCCCCACTCATGGCACTGGTG +
Preference number: 5 (lower is better)
Translates to: GTSSMEHQNSSKALH*EQWSCPRAPLMALV
Trigger: CACCAGTGCCATGAGTGGGGCTCGAGGGCAGCTCCATTGTTCTCAATGCAAAGCTTTACTGCTGTTTTGATGCTCCATACTTGAGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS TCA 90 bp GGAAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGAACCTCAAGTATGGAGCATCAAAAC +
Preference number: 5 (lower is better)
Translates to: GSVVPGALTTFWRVS*SLTRTGTSSMEHQN
Trigger: GTTTTGATGCTCCATACTTGAGGTTCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS GCA 90 bp GGACTGGAACCTCAAGTATGGAGCATCAAAACAGCAGTAAAGCTTTaGATTGAGAACAATGGAGCTGCCCTCGAGCCCCACTCATGGCAC +
Preference number: 5 (lower is better)
Translates to: GLEPQVWSIKTAVKL*IENNGAALEPHSWH
Trigger: GTGCCATGAGTGGGGCTCGAGGGCAGCTCCATTGTTCTCAATGCAAAGCTTTACTGCTGTTTTGATGCTCCATACTTGAGGTTCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS CCA 90 bp CTAAAGTGTAGGTGGGAGGTCTCCCAAACAGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTCCAGGTATCATCCTTCCCCTTCACA +
Preference number: 5 (lower is better)
Translates to: LKCRWEVSQTEELLP*KLVPHFQVSSFPFT
Trigger: TGTGAAGGGGAAGGATGATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCTGTTTGGGAGACCTCCCACCTACACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000412641.1
ENST00000627004.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCCCTCTGGATTGGGCCCAGACATGCCCATTCCTCTGAAGTGAAGCATACTGACCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: ALWIGPRHAHSSEVKHTDRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...GTCAGTATGCTTCACTTCAGAGGAATGGGCATGTCTGGGCCCAATCCAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp CAGGAGGAAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATTGTTTCTCTTCATCCTaGCCAGCAGTTACCACCATT +
Preference number: 5 (lower is better)
Translates to: QEEVLFLGHSPPSGECPDCFSSS*PAVTTI
Trigger: AATGGTGGTAACTGCTGGCAAGGATGAAGAGAAACA...ATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTTCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp TTGAATGCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTGGAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: LNATRSVGGCGQISAAMWRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...CCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp AAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCTTGACCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: KCCSWGTHHLLESVLILDRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...GTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGGACTGGAACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHGLELV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTTCCAGTCC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGAGAACTACTTGGCTTaGATGTCACCTCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLENYLA*MSPPHS
Trigger: AGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCTCTTTGAGAACTACTaGGCTTTGATGTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLLFENY*ALMSPP
Trigger: AGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCATTTCCCCACTGACTaGCCAAAACTTGCCATTCAC +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHHFPTD*PKLAIH
Trigger: GTGAATGGCAAGTTTTGGCAAGTCAGTGGGGAAATG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGGAGTCCTTTTCTTCTaGTCTCGTTCACAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLGVLFF*SRSQRE
Trigger: TTCCCTTTGTGAACGAGACAAGAAGAAAAGGACTCC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCCTCATCAGCAGACTCTaGTCCGCCCAACTCCACACC +
Preference number: 5 (lower is better)
Translates to: LTFWIILSVQVFHSSDTILISRL*SAQLHT
Trigger: GGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAG...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCTCATCAGCAGACTCTaGTCCGCCCAACTCCACACC +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVLISRL*SAQLHT
Trigger: GGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCAGTGCTCTTTTAGGTaGTCCTCATCAGCAGACTCT +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHQCSFR*SSSADS
Trigger: AGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CAGGAGGAAGTGTTGTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTGATTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QEEVLFLGHSPPSGECPDCHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...ATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAACAACACTTCCTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSSRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTTCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPSRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTCTTTGAGAACTACTaGGCTTTGATGTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHLFENY*ALMSPP
Trigger: AGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS GCA 90 bp GTATCATCCATATTCCTGTGCACAGCAGCCTCAATCCAAAGGATCTaGACAGCACAGATCTTGCCTGATCTCCTCCTTGAGTTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: VSSIFLCTAASIQRI*TAQILPDLLLEFSE
Trigger: TTCACTGAACTCAAGGAGGAGATCAGGCAAGATCTGTGCTGTGCAGATCCTTTGGATTGAGGCTGCTGTGCACAGGAATATGGATGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412641.1
ENST00000627004.1
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLCHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHSCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGGACTGGAACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRGLELV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTTCCAGTCC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGACAAGGACTGGAACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRDKDWN*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTTCCAGTCCTTGTC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACTCAATCTTGGACTCATaGGTGTTTTGTAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHSILDS*VFCSQE
Trigger: CTCTTGGCTACAAAACACCAATGAGTCCAAGATTGA...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGCAGAGTACAGAAGAGTaGAAAGTATGGCACATTGAA +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLQSTEE*KVWHIE
Trigger: TTCAATGTGCCATACTTTCAACTCTTCTGTACTCTG...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTTCTTCCTTACAGCTaGGAGAGTATCATCTACAAG +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHLLPYS*ESIIYK
Trigger: CTTGTAGATGATACTCTCCAAGCTGTAAGGAAGAAG...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396058.1
ENST00000627845.1
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGACCTCAAGAAATCATaGTTAAAGTTAGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLDLKKS*LKLAQR
Trigger: TCTCTGGGCTAACTTTAACAATGATTTCTTGAGGTC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396058.1
ENST00000627845.1
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCATCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTASRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCTCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCSRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCTGACTTGCCAAAACTaGCCATTCACACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRLTCQN*PFTLFF
Trigger: GAAGAAGAGTGTGAATGGCAAGTTTTGGCAAGTCAG...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGGTATGGATTTTCTGTaGAAGATGAAGGTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHGMDFL*KMKVGS
Trigger: ACTTCCAACCTTCATCTTCAACAGAAAATCCATACC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCTCATCAGCAGACTCTaGTCCGCCCAACTCCACACC +
Preference number: 5 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMLISRL*SAQLHT
Trigger: GGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACCTGGTATCATGTCAACATTaGACTGACAGGAAACTAAAG +
Preference number: 5 (lower is better)
Translates to: ALLGCPHQQTLVRPTPHLVSCQH*TDRKLK
Trigger: CTTTAGTTTCCTGTCAGTCAAATGTTGACATGATAC...CAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCCCAACTCCACACGACCTCAAGAAATCATaGTTAAAGTTAGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SALLGCPHQQTLVRPTPHDLKKS*LKLAQR
Trigger: TCTCTGGGCTAACTTTAACAATGATTTCTTGAGGTC...GTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396058.1
ENST00000627845.1
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTTCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLSRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATCCAGGATCTGTGCCTaGGTGCGTGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTSRICA*VRASGL
Trigger: GAGACCAGAAGCACGCACCAAGGCACAGATCCTGGA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCGACAAGGACTGGAACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIDKDWN*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTTCCAGTCCTTGTC...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCCATTTCCCCACTGACTaGCCAAAACTTGCCATTCAC +
Preference number: 5 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIHFPTD*PKLAIH
Trigger: GTGAATGGCAAGTTTTGGCAAGTCAGTGGGGAAATG...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTCAATCTTGGACTCATaGGTGTTTTGTAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRSILDS*VFCSQE
Trigger: CTCTTGGCTACAAAACACCAATGAGTCCAAGATTGA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCTCATCAGCAGACTCTaGTCCGCCCAACTCCACACC +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYLISRL*SAQLHT
Trigger: GGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCAGTGCTCTTTTAGGTaGTCCTCATCAGCAGACTCT +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVQCSFR*SSSADS
Trigger: AGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCTTCTTCCTTACAGCTaGGAGAGTATCATCGGGGGC +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRLLPYS*ESIIGG
Trigger: GCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAAG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGCTTCTTCCTTACAGCTaGGAGAGTATCATCGGGGGC +
Preference number: 5 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMLLPYS*ESIIGG
Trigger: GCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAAG...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCCTTCTTCCTTACAGCTaGGAGAGTATCATCGGGGGC +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCLLPYS*ESIIGG
Trigger: GCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAAG...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRCHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGC +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTLHKAL*SQSIVG
Trigger: GCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGAAGCCAGACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSEARLV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTCTGGCTTC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTGAACAGAAGCCAGACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSEQKPD*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTCTGGCTTCTGTTC...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAAGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATAGTACAGGAGGAAGTGTaGTTCCTGGGGCACTCACCA +
Preference number: 5 (lower is better)
Translates to: FHVDSTMNILLCLPDLSIVQEEV*FLGHSP
Trigger: TGGTGAGTGCCCCAGGAACAACACTTCCTCCTGTAC...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TTGAATGCCACTAGGTCAGTAGGAGGATGCGGGCAAATTTCAGCTGCTATGTGGCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: LNATRSVGGCGQISAAMWPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...CCACATAGCAGCTGAAATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCGGACTGGAACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSGLELV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTTCCAGTCC...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCTGACTTGCCAAAACTaGCCATTCACACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVLTCQN*PFTLFF
Trigger: GAAGAAGAGTGTGAATGGCAAGTTTTGGCAAGTCAG...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCATTTCCCCACTGACTaGCCAAAACTTGCCATTCAC +
Preference number: 5 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFHFPTD*PKLAIH
Trigger: GTGAATGGCAAGTTTTGGCAAGTCAGTGGGGAAATG...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGGAGTCCTTTTCTTCTaGTCTCGTTCACAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVGVLFF*SRSQRE
Trigger: TTCCCTTTGTGAACGAGACAAGAAGAAAAGGACTCC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCGGTATGGATTTTCTGTaGAAGATGAAGGTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRGMDFL*KMKVGS
Trigger: ACTTCCAACCTTCATCTTCAACAGAAAATCCATACC...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LTFWIILSVQVFHSSDTISCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: KAENGIINSQQTQDSLNNAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGCGATCCCTCCTCCATaGAATTGCTTTTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTAIPPP*NCFCPC
Trigger: ACAGGGGCAAAAGCAATTCAATGGAGGAGGGATCGC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTGTTTCTCTTCATCCTaGCCAGCAGTTACCACCATT +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSCFSSS*PAVTTI
Trigger: AATGGTGGTAACTGCTGGCAAGGATGAAGAGAAACA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCGGACTGGAACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLGLELV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTTCCAGTCC...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCTCTTTGAGAACTACTaGGCTTTGATGTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSLFENY*ALMSPP
Trigger: AGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCCGCTGTAAGAGGAGGCTTTaGCTTCGAATGAAAACTTTT +
Preference number: 5 (lower is better)
Translates to: DSKSSALLGCPHQQTLVRCKRRL*LRMKTF
Trigger: AAAAGTTTTCATTCGAAGCAAAAGCCTCCTCTTACA...GCGGACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTCTTCTTCCTTACAGCTaGGAGAGTATCATCGGGGGC +
Preference number: 5 (lower is better)
Translates to: VDSTMNILLCLPDLSIHILLPYS*ESIIGG
Trigger: GCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAAG...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTCTTCTTCCTTACAGCTaGGAGAGTATCATCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFLLPYS*ESIIGG
Trigger: GCCCCCGATGATACTCTCCAAGCTGTAAGGAAGAAG...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSSCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFSCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAGGAGCTACTTCCTaGGAAGCTGGTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTRGATS*EAGSPF
Trigger: AAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCT...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGGAACAGAAGCCAGACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKREQKPD*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTCTGGCTTCTGTTC...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LTFWIILSVQVFHSSDTIPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCTAAGGAGCATGCTTTaGAGTCATCTGAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPLRSML*SHLSLL
Trigger: AAGAAGGCTCAGATGACTCAAAAGCATGCTCCTTAG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATTCCACGTTCTGGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTTGTTTCTCTTCATCCTaGCCAGCAGTTACCACCATT +
Preference number: 5 (lower is better)
Translates to: YSTFWMCLFLVVSFICSSCFSSS*PAVTTI
Trigger: AATGGTGGTAACTGCTGGCAAGGATGAAGAGAAACA...AGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCCAGAACGTGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACTGTTTCTCTTCATCCTaGCCAGCAGTTACCACCATT +
Preference number: 5 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHCFSSS*PAVTTI
Trigger: AATGGTGGTAACTGCTGGCAAGGATGAAGAGAAACA...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGGACTGGAACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCGLELV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTTCCAGTCC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAAGAAACTGCGACAAGGACTGGAACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: EVQFLKHDIYMCGFTRNCDKDWN*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTTCCAGTCCTTGTC...GCAGTTTCTTGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCCTGACTTGCCAAAACTaGCCATTCACACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPLTCQN*PFTLFF
Trigger: GAAGAAGAGTGTGAATGGCAAGTTTTGGCAAGTCAG...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTTCAATCTTGGACTCATaGGTGTTTTGTAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPSILDS*VFCSQE
Trigger: CTCTTGGCTACAAAACACCAATGAGTCCAAGATTGA...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCAGTGCTCTTTTAGGTaGTCCTCATCAGCAGACTCT +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRQCSFR*SSSADS
Trigger: AGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSCHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CAGAGTGGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QSGCTILHSQQCMRSCFSCHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...AGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCCACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLSCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHSCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: WYNKLTADSRQLEQFSLPSCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...GGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATGAAGCCAGACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: KAENGIINSQQTQDSLNNEARLV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTCTGGCTTC...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCTAAGGAGCATGCTTTaGAGTCATCTGAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRLRSML*SHLSLL
Trigger: AAGAAGGCTCAGATGACTCAAAAGCATGCTCCTTAG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGACAAGGACTGGAACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTDKDWN*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTTCCAGTCCTTGTC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAAGACAAGGACTGGAACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKDKDWN*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTTCCAGTCCTTGTC...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTGACAAGGACTGGAACTaGTATTGCTGGTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLDKDWN*YCWSIK
Trigger: CTTGATGGACCAGCAATACAAGTTCCAGTCCTTGTC...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAAGAGAACTACTTGGCTTaGATGTCACCTCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKENYLA*MSPPHS
Trigger: AGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTC...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCAGGAGTCCTTTTCTTCTaGTCTCGTTCACAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTAGVLFF*SRSQRE
Trigger: TTCCCTTTGTGAACGAGACAAGAAGAAAAGGACTCC...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp CTGACATTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTGTAAGAGGAGGCTTTaGCTTCGAATGAAAACTTTT +
Preference number: 5 (lower is better)
Translates to: LTFWIILSVQVFHSSDTICKRRL*LRMKTF
Trigger: AAAAGTTTTCATTCGAAGCAAAAGCCTCCTCTTACA...GATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTCAATCAGGTTTCTGTaGTACGTAAAACCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVSIRFL*YVKPFP
Trigger: TGGAAAAGGTTTTACGTACAACAGAAACCTGATTGA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTCAGTGCTCTTTTAGGTaGTCCTCATCAGCAGACTCT +
Preference number: 5 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIQCSFR*SSSADS
Trigger: AGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTG...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCGTATCATGTCAACATTaGACTGACAGGAAACTAAAG +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVVSCQH*TDRKLK
Trigger: CTTTAGTTTCCTGTCAGTCAAATGTTGACATGATAC...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCAAGCTGGGAAATAAATaGTTTTCCTTGGCATCACTG +
Preference number: 5 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFKLGNK*FSLASL
Trigger: CAGTGATGCCAAGGAAAACAATTTATTTCCCAGCTT...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTTTCCAGTTTTCACTCTaGGCTACCTTTCACTCTAAT +
Preference number: 5 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPFQFSL*ATFHSN
Trigger: ATTAGAGTGAAAGGTAGCCAAGAGTGAAAACTGGAA...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TCTGATTCCAAATCCAGTGCTCTTTTAGGTTGTCCTCATCAGCAGACTCTTGTCTCACAGCATTCTCCATaGTTAAAGTACATATGTCCT +
Preference number: 5 (lower is better)
Translates to: SDSKSSALLGCPHQQTLVSQHSP*LKYICP
Trigger: AGGACATATGTACTTTAACAATGGAGAATGCTGTGA...GACAAGAGTCTGCTGATGAGGACAACCTAAAAGAGCACTGGATTTGGAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCTACAGCTCTTTAGTTTaGGGTTTTCGTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: DVSVSRGVFYLFLCLLYFYSSLV*GFRCHC
Trigger: ACAATGGCAACGAAAACCCAAAACTAAAGAGCTGTA...GAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTCAGAGTACAGAAGAGTaGAAAGTATGGCACATTGAA +
Preference number: 5 (lower is better)
Translates to: CVCFSWCLLFVPLPPVFPQSTEE*KVWHIE
Trigger: TTCAATGTGCCATACTTTCAACTCTTCTGTACTCTG...AGGAAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLCHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCGTGGTGTCTTTTATTaGTTCCTCTGCCTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYRGVFY*FLCLLY
Trigger: ATACAGGAGGCAGAGGAACAAATAAAAGACACCACG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp GGATGTGTCTGTTTCTCGTGGTGTCTTTTATTTGTTCCTCTGCCTCCTGTATTTCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: GCVCFSWCLLFVPLPPVFPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...AAATACAGGAGGCAGAGGAACAAATAAAAGACACCACGAGAAACAGACACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACTAAGGAGCATGCTTTaGAGTCATCTGAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTLRSML*SHLSLL
Trigger: AAGAAGGCTCAGATGACTCAAAAGCATGCTCCTTAG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCTAAGGAGCATGCTTTaGAGTCATCTGAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYLRSML*SHLSLL
Trigger: AAGAAGGCTCAGATGACTCAAAAGCATGCTCCTTAG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCTAAGGAGCATGCTTTaGAGTCATCTGAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLLRSML*SHLSLL
Trigger: AAGAAGGCTCAGATGACTCAAAAGCATGCTCCTTAG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATATGTTTCTCTTCATCCTaGCCAGCAGTTACCACCATT +
Preference number: 5 (lower is better)
Translates to: FHVDSTMNILLCLPDLSICFSSS*PAVTTI
Trigger: AATGGTGGTAACTGCTGGCAAGGATGAAGAGAAACA...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTGGACTGGAACTTGTATaGCTGGTCCATCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: VDSTMNILLCLPDLSIHIGLELV*LVHQGL
Trigger: AAGACCTTGATGGACCAGCAATACAAGTTCCAGTCC...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTGAGAACTACTTGGCTTaGATGTCACCTCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: YMGCLQVSTITNKAAMNIENYLA*MSPPHS
Trigger: AGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTC...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp CCCTTAAGATTAAGAATATTCTTCAAACTACCACCACCGTCACAGGTAAGAAAACTGACTTGCCAAAACTaGCCATTCACACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PLRLRIFFKLPPPSQVRKLTCQN*PFTLFF
Trigger: GAAGAAGAGTGTGAATGGCAAGTTTTGGCAAGTCAG...TTTTCTTACCTGTGACGGTGGTGGTAGTTTGAAGAATATTCTTAATCTTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTCATTTCCCCACTGACTaGCCAAAACTTGCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFHFPTD*PKLAIH
Trigger: GTGAATGGCAAGTTTTGGCAAGTCAGTGGGGAAATG...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGGAGTCCTTTTCTTCTaGTCTCGTTCACAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTGVLFF*SRSQRE
Trigger: TTCCCTTTGTGAACGAGACAAGAAGAAAAGGACTCC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGATAGCACCCTTCACCCACTTTCCCCTCATGGTTACATCTTACATAAAATGGGTATGGATTTTCTGTaGAAGATGAAGGTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: KDSTLHPLSPHGYILHKMGMDFL*KMKVGS
Trigger: ACTTCCAACCTTCATCTTCAACAGAAAATCCATACC...CATTTTATGTAAGATGTAACCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCGTATCATGTCAACATTaGACTGACAGGAAACTAAAG +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSVSCQH*TDRKLK
Trigger: CTTTAGTTTCCTGTCAGTCAAATGTTGACATGATAC...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCAAGCTGGGAAATAAATaGTTTTCCTTGGCATCACTG +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLKLGNK*FSLASL
Trigger: CAGTGATGCCAAGGAAAACAATTTATTTCCCAGCTT...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATTACAGCTCTTTAGTTTaGGGTTTTCGTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHYSSLV*GFRCHC
Trigger: ACAATGGCAACGAAAACCCAAAACTAAAGAGCTGTA...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp ATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATTTTCACTCCCCTCTCTACAGCTCTTTAGTTTaGGGTTTTCGTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: IINSQQTQDSLNNFHSPLYSSLV*GFRCHC
Trigger: ACAATGGCAACGAAAACCCAAAACTAAAGAGCTGTA...GAGAGGGGAGTGAAAATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GGCTGTACCATTTTACATTCCCAGCAATGTATGAGATCCTGTTTCTCTTCATCCTCAACAATGAACATTTaGCTATGTTTGCCTGATCTC +
Preference number: 5 (lower is better)
Translates to: GCTILHSQQCMRSCFSSSSTMNI*LCLPDL
Trigger: GAGATCAGGCAAACATAGCAAAATGTTCATTGTTGA...GGATGAAGAGAAACAGGATCTCATACATTGCTGGGAATGTAAAATGGTACAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCTTCTTCCTTACAGCTaGGAGAGTATCATCTACAAG +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRLLPYS*ESIIYK
Trigger: CTTGTAGATGATACTCTCCAAGCTGTAAGGAAGAAG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383745.6
ENST00000627752.2
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRCHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATATGGGTTGCCTACAGGTTTCGACCATTACAAATAAAGCTGCTATGAACATTTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: YMGCLQVSTITNKAAMNISCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...AATGTTCATAGCAGCTTTATTTGTAATGGTCGAAACCTGTAGGCAACCCATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTTCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLSCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATATCTTGTCTCAGAGCATaGTGGGCTACATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FHVDSTMNILLCLPDLSISCLRA*WATFSL
Trigger: AAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGA...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp CCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATCACCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: PIDLCNHHCNQDTQVFHHPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...GTGATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GGAAATAAATTGTTTTCCTTGGCATCACTGTTAATGGCTGGCCATAACATTTTTGAGAACTACTTGGCTTaGATGTCACCTCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: GNKLFSLASLLMAGHNIFENYLA*MSPPHS
Trigger: AGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTC...AAAAATGTTATGGCCAGCCATTAACAGTGATGCCAAGGAAAACAATTTATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTCTCTTTGAGAACTACTaGGCTTTGATGTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: VDSTMNILLCLPDLSIHILFENY*ALMSPP
Trigger: AGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAG...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GCACCTATAGATTTGTGTAACCACCACTGCAATCAAGATACACAAGTGTTCCATTCAACAATGAACATTTaGCTATGTTTGCCTGATCTC +
Preference number: 5 (lower is better)
Translates to: APIDLCNHHCNQDTQVFHSTMNI*LCLPDL
Trigger: GAGATCAGGCAAACATAGCAAAATGTTCATTGTTGA...ATGGAACACTTGTGTATCTTGATTGCAGTGGTGGTTACACAAATCTATAGGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGCTGAAAAGGCAGAGTACAGAAGAGTaGAAAGTATGGCACATTGAA +
Preference number: 5 (lower is better)
Translates to: VGLLPMDIQLLQQYLLKRQSTEE*KVWHIE
Trigger: TTCAATGTGCCATACTTTCAACTCTTCTGTACTCTG...CCTTTTCAGCAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCTTCTTCCTTACAGCTaGGAGAGTATCATCTACAAG +
Preference number: 5 (lower is better)
Translates to: KAENGIINSQQTQDSLNNLLPYS*ESIIYK
Trigger: CTTGTAGATGATACTCTCCAAGCTGTAAGGAAGAAG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383745.6
ENST00000627752.2
CDS-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: KAENGIINSQQTQDSLNNPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TTCCATGTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: FHVDSTMNILLCLPDLSIPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...TATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCACATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACACCATTAATTGATTTCTaGGGTTCTCTTCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTPLIDF*GSLPGK
Trigger: TTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGG...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCACCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTAPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TTAGTGCTGGGACAGAATGTTGTTTCATTAGTAACAGGCTATCATTTGACAGCATCAATCAGGTTTCTGTaGTACGTAAAACCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LVLGQNVVSLVTGYHLTASIRFL*YVKPFP
Trigger: TGGAAAAGGTTTTACGTACAACAGAAACCTGATTGA...TGCTGTCAAATGATAGCCTGTTACTAATGAAACAACATTCTGTCCCAGCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TTCTGGATCATACTGTCTGTTCAGGTTTTCCACAGCAGTGACACTATCTTTAAATCAATCAGGTTTCTGTaGTACGTAAAACCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: FWIILSVQVFHSSDTIFKSIRFL*YVKPFP
Trigger: TGGAAAAGGTTTTACGTACAACAGAAACCTGATTGA...TTTAAAGATAGTGTCACTGCTGTGGAAAACCTGAACAGACAGTATGATCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACAGGTATGGATTTTCTGTaGAAGATGAAGGTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTGMDFL*KMKVGS
Trigger: ACTTCCAACCTTCATCTTCAACAGAAAATCCATACC...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp ATTCTGATAGGTGATATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGGTATCATGTCAACATTaGACTGACAGGAAACTAAAG +
Preference number: 5 (lower is better)
Translates to: ILIGDISRFYSAFPSCLMVSCQH*TDRKLK
Trigger: CTTTAGTTTCCTGTCAGTCAAATGTTGACATGATAC...CATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATATCACCTATCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATACAGCTCTTTAGTTTaGGGTTTTCGTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTYSSLV*GFRCHC
Trigger: ACAATGGCAACGAAAACCCAAAACTAAAGAGCTGTA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp CCTGAAGTTGTTGGTTTACTGCCTATGGATATCCAATTACTCCAACAGTATTTGTCAACAATGAACATTTaGCTATGTTTGCCTGATCTC +
Preference number: 5 (lower is better)
Translates to: PEVVGLLPMDIQLLQQYLSTMNI*LCLPDL
Trigger: GAGATCAGGCAAACATAGCAAAATGTTCATTGTTGA...CAAATACTGTTGGAGTAATTGGATATCCATAGGCAGTAAACCAACAACTTCAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCAGAGTACAGAAGAGTaGAAAGTATGGCACATTGAA +
Preference number: 5 (lower is better)
Translates to: KAENGIINSQQTQDSLNNQSTEE*KVWHIE
Trigger: TTCAATGTGCCATACTTTCAACTCTTCTGTACTCTG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTTGTCATTGTTGTTTTTaGAAAAAGGCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VDSTMNILLCLPDLSIHICHCCF*KKAPLQ
Trigger: CTGGAGAGGAGCCTTTTTCAAAAAACAACAATGACA...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAAGCAGAGAATGGTATAATAAACTCACAGCAGACTCAAGACAGCTTGAACAATCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: KAENGIINSQQTQDSLNNPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...ATTGTTCAAGCTGTCTTGAGTCTGCTGTGAGTTTATTATACCATTCTCTGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACCCTGTCAAAAATCAATaGGCCATTTATGTGAGTCTA +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYPVKNQ*AIYVSL
Trigger: TAGACTCACATAAATGGCCAATTGATTTTTGACAGG...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000627517.2
ENST00000627752.2
ENST00000627858.1
ENST00000628172.3
CDS-3UTR CAA 90 bp AAATGCTCAGAAGTGCAATTCCTGAAGCATGACATATACATGTGTGGTTTTACATGTAAGAGGAGGCTTTaGCTTCGAATGAAAACTTTT +
Preference number: 5 (lower is better)
Translates to: KCSEVQFLKHDIYMCGFTCKRRL*LRMKTF
Trigger: AAAAGTTTTCATTCGAAGCAAAAGCCTCCTCTTACA...TGTAAAACCACACATGTATATGTCATGCTTCAGGAATTGCACTTCTGAGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp TATCTCACGATTTTACTCTGCATTTCCCTCATGCCTAATGATGTTGAACATCTTTCAATCAGGTTTCTGTaGTACGTAAAACCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: YLTILLCISLMPNDVEHLSIRFL*YVKPFP
Trigger: TGGAAAAGGTTTTACGTACAACAGAAACCTGATTGA...AAGATGTTCAACATCATTAGGCATGAGGGAAATGCAGAGTAAAATCGTGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp GTGGACTCAACAATGAACATTTTGCTATGTTTGCCTGATCTCTCAATACATATTTTCCAGTTTTCACTCTaGGCTACCTTTCACTCTAAT +
Preference number: 5 (lower is better)
Translates to: VDSTMNILLCLPDLSIHIFQFSL*ATFHSN
Trigger: ATTAGAGTGAAAGGTAGCCAAGAGTGAAAACTGGAA...AATATGTATTGAGAGATCAGGCAAACATAGCAAAATGTTCATTGTTGAGTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344387.9
ENST00000628172.3
CDS-3UTR CAA 90 bp ATACATGTGTGGTTTTACAAGAAACTGCCAAATTATATTCCAGAGTGGCTGTACTCAACAATGAACATTTaGCTATGTTTGCCTGATCTC +
Preference number: 5 (lower is better)
Translates to: IHVWFYKKLPNYIPEWLYSTMNI*LCLPDL
Trigger: GAGATCAGGCAAACATAGCAAAATGTTCATTGTTGA...GTACAGCCACTCTGGAATATAATTTGGCAGTTTCTTGTAAAACCACACATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383745.6
ENST00000627752.2
ENST00000628172.3
CDS GCA 72 bp GAGTATCATCGGGGGCTCCCGCTGCGGCTCCAGCCTTaGGTACCGCCGCCTCGGCGCCAGGCCGCTAGGAGA +
Preference number: 6 (lower is better)
Translates to: EYHRGLPLRLQP*VPPPRRQAARR
Trigger: TCTCCTAGCGGCCTGGCGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGATGATACTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000628172.3
CDS TCA 72 bp TGCGTACCGCCGCCTCGGCGCCAGGCCGCTAGGAGATaGCACAGGAACGAGCCCTTCCGGCAGCCGAGGCAC +
Preference number: 6 (lower is better)
Translates to: CVPPPRRQAARR*HRNEPFRQPRH
Trigger: GTGCCTCGGCTGCCGGAAGGGCTCGTTCCTGTGTCATCTCCTAGCGGCCTGGCGCCGAGGCGGCGGTACGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000627517.2
ENST00000628172.3
CDS GCA 72 bp TTGGAGAGTATCATCTACAAGACCGGGGGCTCCCGCTaGGGCTCCAGCCTTGCGTACCGCCGCCTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: LESIIYKTGGSR*GSSLAYRRLGA
Trigger: GGCGCCGAGGCGGCGGTACGCAAGGCTGGAGCCGCAGCGGGAGCCCCCGGTCTTGTAGATGATACTCTCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383745.6
ENST00000627752.2
CDS TCA 72 bp AATGGAGCTGCCCTCGAGCCCCACTCATGGCACTGGTaGCCTCTCCCAGAGGAGACTGTACACAACGGTGGG +
Preference number: 6 (lower is better)
Translates to: NGAALEPHSWHW*PLPEETVHNGG
Trigger: CCCACCGTTGTGTACAGTCTCCTCTGGGAGAGGTCACCAGTGCCATGAGTGGGGCTCGAGGGCAGCTCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS TCA 72 bp GTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGAACCTCAAGTATGGAG +
Preference number: 6 (lower is better)
Translates to: VPGALTTFWRVS*SLTRTGTSSME
Trigger: CTCCATACTTGAGGTTCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS TCA 72 bp AGGGTCTTGAGTCACGAAAGCGCCAGACCCACATCTTaGACAAAGCGCAGAAGGAACTGCGTCAGCAACTCC +
Preference number: 6 (lower is better)
Translates to: RVLSHESARPTS*TKRRRNCVSNS
Trigger: GGAGTTGCTGACGCAGTTCCTTCTGCGCTTTGTTCAAGATGTGGGTCTGGCGCTTTCGTGACTCAAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412641.1
ENST00000627004.1
CDS CCA 72 bp CTGGTGACCTCTCCCAGAGGAGACTGTACACAACGGTaGGAACAGAAGCCAGACTTGTATTGCTGGTCCATC +
Preference number: 6 (lower is better)
Translates to: LVTSPRGDCTQR*EQKPDLYCWSI
Trigger: GATGGACCAGCAATACAAGTCTGGCTTCTGTTCCCACCGTTGTGTACAGTCTCCTCTGGGAGAGGTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS CAA 72 bp GAGGGTCTTGAGTCACGAAAGCGCCAGACCCACATCTaGAACAAAGCGCAGAAGGAACTGCGTCAGCAACTC +
Preference number: 6 (lower is better)
Translates to: EGLESRKRQTHI*NKAQKELRQQL
Trigger: GAGTTGCTGACGCAGTTCCTTCTGCGCTTTGTTCAAGATGTGGGTCTGGCGCTTTCGTGACTCAAGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412641.1
ENST00000627004.1
CDS TCA 72 bp GTTCCTGGGGCACTCACCACCTTCTGGAGAGTGTCCTaGTCCTTGACAAGGACTGGAACTTGTATTGCTGGT +
Preference number: 6 (lower is better)
Translates to: VPGALTTFWRVS*SLTRTGTCIAG
Trigger: ACCAGCAATACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000628172.3
CDS CCA 72 bp AGGTGGGAGGTCTCCCAAACAGAGGAGCTACTTCCTTaGAAGCTGGTTCCCCATTTCCAGGTATCATCCTTC +
Preference number: 6 (lower is better)
Translates to: RWEVSQTEELLP*KLVPHFQVSSF
Trigger: GAAGGATGATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCTGTTTGGGAGACCTCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000412641.1
ENST00000627004.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000627858.1
ENST00000628172.3
CDS CAA 90 bp TCTCCCAGAGGAGACTGTACACAACGGTGGGAACAGAAGCCAGACTaGTATTGCTGGTCCATCAAGGTCTTTCTGCAGCTCCTCTACCAG +
Preference number: 6 (lower is better)
Translates to: SPRGDCTQRWEQKPD*YCWSIKVFLQLLYQ
Trigger: CTGGTAGAGGAGCTGCAGAAAGACCTTGATGGACCAGCAATACAAGTCTGGCTTCTGTTCCCACCGTTGTGTACAGTCTCCTCTGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS TCA 72 bp GGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCTTaGCAAGGACTGGAACCTCAAGTATGGAGCATCAAA +
Preference number: 6 (lower is better)
Translates to: GHSPPSGECPDP*QGLEPQVWSIK
Trigger: TTTGATGCTCCATACTTGAGGTTCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS TCA 72 bp GGGCACTCACCACCTTCTGGAGAGTGTCCTGATCCTTaGCAAGGACTGGAACTTGTATTGCTGGTCCATCAA +
Preference number: 6 (lower is better)
Translates to: GHSPPSGECPDP*QGLELVLLVHQ
Trigger: TTGATGGACCAGCAATACAAGTTCCAGTCCTTGTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000628172.3
CDS CCA 72 bp AGGTCTCCCAAACAGAGGAGCTACTTCCTTGGAAGCTaGTTCCCCATTTCCAGGTATCATCCTTCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: RSPKQRSYFLGS*FPISRYHPSPS
Trigger: TGAAGGGGAAGGATGATACCTGGAAATGGGGAACCAGCTTCCAAGGAAGTAGCTCCTCTGTTTGGGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000412641.1
ENST00000627004.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000627858.1
ENST00000628172.3
CDS CAA 72 bp GGAGACTGTACACAACGGTGGGAACAGAAGCCAGACTaGTATTGCTGGTCCATCAAGGTCTTTCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: GDCTQRWEQKPD*YCWSIKVFLQL
Trigger: GAGCTGCAGAAAGACCTTGATGGACCAGCAATACAAGTCTGGCTTCTGTTCCCACCGTTGTGTACAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS CAA 72 bp CTGTACACAACGGTGGGAACAGAAGCCAGACTTGTATaGCTGGTCCATCAAGGTCTTTCTGCAGCTCCTCTA +
Preference number: 6 (lower is better)
Translates to: LYTTVGTEARLV*LVHQGLSAAPL
Trigger: TAGAGGAGCTGCAGAAAGACCTTGATGGACCAGCAATACAAGTCTGGCTTCTGTTCCCACCGTTGTGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS TCA 72 bp AGTATGGAGCATCAAAACAGCAGTAAAGCTTTGCATTaGGAACAATGGAGCTGCCCTCGAGCCCCACTCATG +
Preference number: 6 (lower is better)
Translates to: SMEHQNSSKALH*EQWSCPRAPLM
Trigger: CATGAGTGGGGCTCGAGGGCAGCTCCATTGTTCTCAATGCAAAGCTTTACTGCTGTTTTGATGCTCCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334075.6
ENST00000627858.1
CDS GCA 72 bp CAGCCTCAATCCAAAGGATCTGCACAGCACAGATCTTaGCTGATCTCCTCCTTGAGTTCAGTGAAGAAGTTC +
Preference number: 6 (lower is better)
Translates to: QPQSKGSAQHRS*LISSLSSVKKF
Trigger: GAACTTCTTCACTGAACTCAAGGAGGAGATCAGGCAAGATCTGTGCTGTGCAGATCCTTTGGATTGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412641.1
ENST00000627004.1
CDS CAA 72 bp GCAGCCTCAATCCAAAGGATCTGCACAGCACAGATCTaGCCTGATCTCCTCCTTGAGTTCAGTGAAGAAGTT +
Preference number: 6 (lower is better)
Translates to: AASIQRICTAQI*PDLLLEFSEEV
Trigger: AACTTCTTCACTGAACTCAAGGAGGAGATCAGGCAAGATCTGTGCTGTGCAGATCCTTTGGATTGAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412641.1
ENST00000627004.1
CDS CAA 72 bp TTTCCAGGTATCATCCTTCCCCTTCACAAGGCCCTCTaGTCTCAGAGCATTGTGGGCTACATTTTCTCTTGT +
Preference number: 6 (lower is better)
Translates to: FPGIILPLHKAL*SQSIVGYIFSC
Trigger: ACAAGAGAAAATGTAGCCCACAATGCTCTGAGACAAGAGGGCCTTGTGAAGGGGAAGGATGATACCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000334075.6
ENST00000344387.9
ENST00000383744.8
ENST00000383745.6
ENST00000396058.1
ENST00000412641.1
ENST00000627004.1
ENST00000627517.2
ENST00000627752.2
ENST00000627845.1
ENST00000627858.1
ENST00000628172.3
CDS CAA 72 bp CTTTATGAGAGTCTGCTCTTTGAGAACTACTTGGCTTaGATGTCACCTCCTCATTCTCGGTCATGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: LYESLLFENYLA*MSPPHSRSWSP
Trigger: GGGAGACCATGACCGAGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS CAA 90 bp TTGATGTTCCTTTATGAGAGTCTGCTCTTTGAGAACTACTTGGCTTaGATGTCACCTCCTCATTCTCGGTCATGGTCTCCCATTCTAGGG +
Preference number: 6 (lower is better)
Translates to: LMFLYESLLFENYLA*MSPPHSRSWSPILG
Trigger: CCCTAGAATGGGAGACCATGACCGAGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAGGAACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS TCA 72 bp TTTATGAGAGTCTGCTCTTTGAGAACTACTTGGCTTTaGTGTCACCTCCTCATTCTCGGTCATGGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: FMRVCSLRTTWL*CHLLILGHGLP
Trigger: TGGGAGACCATGACCGAGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAGCAGACTCTCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS CAA 90 bp TCCTTCCACTTTTGGCCTTGTTTCTCTGGTGGAGTCCTTTTCTTCTaGTCTCGTTCACAAAGGGAAACTTTCTTCACTGTATCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: SFHFWPCFSGGVLFF*SRSQRETFFTVSAL
Trigger: AAGGGCAGATACAGTGAAGAAAGTTTCCCTTTGTGAACGAGACAAGAAGAAAAGGACTCCACCAGAGAAACAAGGCCAAAAGTGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS CAA 72 bp ATGTTCCTTTATGAGAGTCTGCTCTTTGAGAACTACTaGGCTTTGATGTCACCTCCTCATTCTCGGTCATGG +
Preference number: 6 (lower is better)
Translates to: MFLYESLLFENY*ALMSPPHSRSW
Trigger: CCATGACCGAGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAGGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS CAA 90 bp GTCTTTTTGATGTTCCTTTATGAGAGTCTGCTCTTTGAGAACTACTaGGCTTTGATGTCACCTCCTCATTCTCGGTCATGGTCTCCCATT +
Preference number: 6 (lower is better)
Translates to: VFLMFLYESLLFENY*ALMSPPHSRSWSPI
Trigger: AATGGGAGACCATGACCGAGAATGAGGAGGTGACATCAAAGCCAAGTAGTTCTCAAAGAGCAGACTCTCATAAAGGAACATCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3
CDS CAA 72 bp TTTTGGCCTTGTTTCTCTGGTGGAGTCCTTTTCTTCTaGTCTCGTTCACAAAGGGAAACTTTCTTCACTGTA +
Preference number: 6 (lower is better)
Translates to: FWPCFSGGVLFF*SRSQRETFFTV
Trigger: TACAGTGAAGAAAGTTTCCCTTTGTGAACGAGACAAGAAGAAAAGGACTCCACCAGAGAAACAAGGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344387.9
ENST00000396058.1
ENST00000627845.1
ENST00000628172.3