RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF195 (Homo sapiens)

Ensembl gene IDs: ENSG00000005801

Ensembl transcript IDs: ENST00000005082.13, ENST00000330692.11, ENST00000343338.11, ENST00000354599.10, ENST00000399602.9, ENST00000429541.6, ENST00000525313.6, ENST00000525502.5, ENST00000526501.5, ENST00000526540.5, ENST00000526601.5, ENST00000527386.1, ENST00000528218.5, ENST00000528410.5, ENST00000528636.1, ENST00000529085.5, ENST00000529228.5, ENST00000529678.5, ENST00000530643.5, ENST00000532539.1, ENST00000533036.5, ENST00000618467.4, ENST00000620374.4, ENST00000649622.1

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCACGAAGAAGATACAATACAGACAGTATAGTCTCTTCAACACTTaGTCCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAACT +
Preference number: 1 (lower is better)
Translates to: FTKKIQYRQYSLFNT*SLQRSNHTSVYIIT
Trigger: AGTTATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGACCAAGTGTTGAAGAGACTATACTGTCTGTATTGTATCTTCTTCGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526501.5
3UTR TCA 90 bp TCTAGATGTCTCTGTAGACTCAACACAGGGATTCAGTGTCATTTCTaGACGTGTCCTTGCTTATTTTTCCCATTTAGTGTATTTGCAAAA +
Preference number: 1 (lower is better)
Translates to: SRCLCRLNTGIQCHF*TCPCLFFPFSVFAK
Trigger: TTTTGCAAATACACTAAATGGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGTCTACAGAGACATCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTCGGGGTGCGGGAGCTaGGTTGGGGGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SFIELLGCSTTVRGGSPASGCGS*VGGAGE
Trigger: TTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGA...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACTCGGGGTGCGGGAGCTaGGTTGGGGGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYSGCGS*VGGAGE
Trigger: TTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGA...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTATCGGGGTGCGGGAGCTaGGTTGGGGGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: APPQLEEAALLTDYSRFLSGCGS*VGGAGE
Trigger: TTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGA...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTAGAACTGGGTTGGGGTaGGGGAGCTTAGTCGAGGGT +
Preference number: 2 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPRTGLG*GSLVEG
Trigger: ACCCTCGACTAAGCTCCCCCACCCCAACCCAGTTCT...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAGTGCGGGAGCTGAGTTaGGGGTGCAGGAGAACTGGG +
Preference number: 2 (lower is better)
Translates to: APPQLEEAALLTDYSRFLVRELS*GCRRTG
Trigger: CCCAGTTCTCCTGCACCCCCAACTCAGCTCCCGCAC...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR GCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACTTGCCAGCTTTGTTATaGGAGGTGAACAGACATGTT +
Preference number: 2 (lower is better)
Translates to: IGPELGRGAGAELGVQENLPALL*EVNRHV
Trigger: AACATGTCTGTTCACCTCGCATAACAAAGCTGGCAA...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR GCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTGAGCTTAGTCGAGGGTaGAGGTGTCTTGTCTGCATC +
Preference number: 2 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAELSRG*RCLVCI
Trigger: GATGCAGACAAGACACCTGCACCCTCGACTAAGCTC...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR GCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGAGCTTAGTCGAGGGTaGAGGTGTCTTGTCTGCATC +
Preference number: 2 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYELSRG*RCLVCI
Trigger: GATGCAGACAAGACACCTGCACCCTCGACTAAGCTC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACTACTCTTGTGTGCTCTaGAGACTTATATTTCATGAA +
Preference number: 2 (lower is better)
Translates to: IGPELGRGAGAELGVQENYSCVL*RLIFHE
Trigger: TTCATGAAATATAAGTCTCCAGAGCACACAAGAGTA...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTATTAAGTCTGAACTCTaGTGTAAAGTGGGATGCGAG +
Preference number: 2 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAIKSEL*CKVGCE
Trigger: CTCGCATCCCACTTTACATCAGAGTTCAGACTTAAT...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR GCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTTTGCCAGCTTTGTTATaGGAGGTGAACAGACATGTT +
Preference number: 2 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPLPALL*EVNRHV
Trigger: AACATGTCTGTTCACCTCGCATAACAAAGCTGGCAA...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGAGACACAGCATCTACTaGTTTGAGAATAGAATGACA +
Preference number: 2 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLRHSIY*FENRMT
Trigger: TGTCATTCTATTCTCAAATCAGTAGATGCTGTGTCT...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTGGACAAGTATATCAGTaGTGCACACCTAAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAGQVYQ*CTPKRK
Trigger: TTTTCTCTTAGGTGTGCATCACTGATATACTTGTCC...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR CAA 90 bp TTAGTCGAGGGTGCAGGTGTCTTGTCTGCATCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAGGTGAACAGACATGTTAACCGCATC +
Preference number: 2 (lower is better)
Translates to: LVEGAGVLSASWRCF*PALLCEVNRHVNRI
Trigger: GATGCGGTTAACATGTCTGTTCACCTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGATGCAGACAAGACACCTGCACCCTCGACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGGACAAGTATATCAGTaGTGCACACCTAAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYGQVYQ*CTPKRK
Trigger: TTTTCTCTTAGGTGTGCATCACTGATATACTTGTCC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR GCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGAGAAATACTCTTGTGTaGTCTGGAGACTTATATTTC +
Preference number: 2 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLRNTLV*SGDLYF
Trigger: GAAATATAAGTCTCCAGAGCACACAAGAGTATTTCT...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGTACTCTTGTGTGCTCTaGAGACTTATATTTCATGAA +
Preference number: 2 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLYSCVL*RLIFHE
Trigger: TTCATGAAATATAAGTCTCCAGAGCACACAAGAGTA...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAATTAAGTCTGAACTCTaGTGTAAAGTGGGATGCGAG +
Preference number: 2 (lower is better)
Translates to: APPQLEEAALLTDYSRFLIKSEL*CKVGCE
Trigger: CTCGCATCCCACTTTACATCAGAGTTCAGACTTAAT...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACACAGCATCTACTaGTTTGAGAATAGAATGACA +
Preference number: 2 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYRHSIY*FENRMT
Trigger: TGTCATTCTATTCTCAAATCAGTAGATGCTGTGTCT...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR GCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTAGAAATACTCTTGTGTaGTCTGGAGACTTATATTTC +
Preference number: 2 (lower is better)
Translates to: SFIELLGCSTTVRGGSPARNTLV*SGDLYF
Trigger: GAAATATAAGTCTCCAGAGCACACAAGAGTATTTCT...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAGGACAAGTATATCAGTaGTGCACACCTAAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: APPQLEEAALLTDYSRFLGQVYQ*CTPKRK
Trigger: TTTTCTCTTAGGTGTGCATCACTGATATACTTGTCC...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTATACTCTTGTGTGCTCTaGAGACTTATATTTCATGAA +
Preference number: 2 (lower is better)
Translates to: APPQLEEAALLTDYSRFLYSCVL*RLIFHE
Trigger: TTCATGAAATATAAGTCTCCAGAGCACACAAGAGTA...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCATTAAGTCTGAACTCTaGTGTAAAGTGGGATGCGAG +
Preference number: 2 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPIKSEL*CKVGCE
Trigger: CTCGCATCCCACTTTACATCAGAGTTCAGACTTAAT...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR TCA 90 bp GAAAATACCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAACTGAAGGGATAAAAGCAGCATCTTaGAGAATTATCTGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: ENTLQRSNHTSVYIITEGIKAAS*RIICSL
Trigger: GAGGGAGCAGATAATTCTTCAAGATGCTGCTTTTAT...CCCTTCAGTTATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530643.5
3UTR-3UTR GCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACAGAAATACTCTTGTGTaGTCTGGAGACTTATATTTC +
Preference number: 2 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHRNTLV*SGDLYF
Trigger: GAAATATAAGTCTCCAGAGCACACAAGAGTATTTCT...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCTACTCTTGTGTGCTCTaGAGACTTATATTTCATGAA +
Preference number: 2 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPYSCVL*RLIFHE
Trigger: TTCATGAAATATAAGTCTCCAGAGCACACAAGAGTA...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CAA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACTCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAG +
Preference number: 3 (lower is better)
Translates to: IGPELGRGAGAELGVQENSWRCF*PALLCE
Trigger: CTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGA...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CAA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTTCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAG +
Preference number: 3 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPSWRCF*PALLCE
Trigger: CTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGA...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR-3UTR CAA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTATCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAG +
Preference number: 3 (lower is better)
Translates to: APPQLEEAALLTDYSRFLSWRCF*PALLCE
Trigger: CTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGA...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR CCA 72 bp AAGATACAATACAGACAGTATAGTCTCTTCAACACTTaGTCCCTGCAACGCAGCAATCACACTTCTGTGTAT +
Preference number: 3 (lower is better)
Translates to: KIQYRQYSLFNT*SLQRSNHTSVY
Trigger: ATACACAGAAGTGTGATTGCTGCGTTGCAGGGACCAAGTGTTGAAGAGACTATACTGTCTGTATTGTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526501.5
3UTR-3UTR CAA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTCTCAGTATTCTTTTaGGGAATGCATCTTGTATGC +
Preference number: 3 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWLSVFF*GMHLVC
Trigger: GCATACAAGATGCATTCCCAAAAAGAATACTGAGAG...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
3UTR-3UTR CAA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCCTCTCAGTATTCTTTTaGGGAATGCATCTTGTATGC +
Preference number: 3 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEALSVFF*GMHLVC
Trigger: GCATACAAGATGCATTCCCAAAAAGAATACTGAGAG...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
3UTR TCA 72 bp CTCTGTAGACTCAACACAGGGATTCAGTGTCATTTCTaGACGTGTCCTTGCTTATTTTTCCCATTTAGTGTA +
Preference number: 3 (lower is better)
Translates to: LCRLNTGIQCHF*TCPCLFFPFSV
Trigger: TACACTAAATGGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGTCTACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR GCA 72 bp AGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTaGAGCATTATTCACAATTGTCAAGATATAAAGACA +
Preference number: 3 (lower is better)
Translates to: SILKNYLLPHVH*SIIHNCQDIKT
Trigger: TGTCTTTATATCTTGACAATTGTGAATAATGCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR GCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACTTCTGGATCTCCCGGTaGCTGCGGGTCACACGACCT +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENFWISR*LRVTRP
Trigger: AGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAA...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACCGCGGGGACAGGAAGTaGAGCTCTGTCGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENRGDRK*SSVGTK
Trigger: CTTTGTCCCGACAGAGCTCCACTTCCTGTCCCCGCG...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343338.11
ENST00000620374.4
CDS-3UTR TCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGTCGGGGTGCGGGAGCTaGGTTGGGGGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLSGCGS*VGGAGE
Trigger: TTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGA...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGGGATCTCCCGGTGCCTaGGGGTCACACGACCTACGG +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEGSPGA*GSHDLR
Trigger: CCGTAGGTCGTGTGACCCGCAGGCACCGGGAGATCC...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACACATTGAGGCCTGGCTaGGCACGGTGGTTCACACCT +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENTLRPG*ARWFTP
Trigger: AGGTGTGAACCACCGTGCCCAGCCAGGCCTCAATGT...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACAGAACTGGGTTGGGGTaGGGGAGCTTAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENRTGLG*GSLVEG
Trigger: ACCCTCGACTAAGCTCCCCCACCCCAACCCAGTTCT...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGGTGCGGGAGCTGAGTTaGGGGTGCAGGAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEVRELS*GCRRTG
Trigger: CCCAGTTCTCCTGCACCCCCAACTCAGCTCCCGCAC...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGCTGGCGTTTCACTTCTaGATCTCCCGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLLAFHF*ISRCLR
Trigger: CCGCAGGCACCGGGAGATCCAGAAGTGAAACGCCAG...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTGTGCGGGAGCTGAGTTaGGGGTGCAGGAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAVRELS*GCRRTG
Trigger: CCCAGTTCTCCTGCACCCCCAACTCAGCTCCCGCAC...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTTTCTGGATCTCCCGGTaGCTGCGGGTCACACGACCT +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPFWISR*LRVTRP
Trigger: AGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAA...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTTCTGGATCTCCCGGTaGCTGCGGGTCACACGACCT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAFWISR*LRVTRP
Trigger: AGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAA...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGAGCTGAGTTGGGGGTaGAGGAGAACTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPELSWG*RRTGLG
Trigger: CCCCAACCCAGTTCTCCTGCACCCCCAACTCAGCTC...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGAGAACTGGGTTGGGGTaGGGGAGCTTAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEERTGLG*GSLVEG
Trigger: ACCCTCGACTAAGCTCCCCCACCCCAACCCAGTTCT...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTTGTCCACAGAAACATTaGGGCCTGGCTGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPCPQKH*GLAGHG
Trigger: ACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACA...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACAAAGTGGAGGCCGCAGTaGGCCACGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: AVNLSTETLRPGWARWFTKWRPQ*ATITPL
Trigger: CAGTGGTGTGATCGTGGCTCACTGCGGCCTCCACTT...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529228.5
CDS-3UTR GCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAGGATCTCCCGGTGCCTaGGGGTCACACGACCTACGG +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLGSPGA*GSHDLR
Trigger: CCGTAGGTCGTGTGACCCGCAGGCACCGGGAGATCC...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACATTCTGGATCTCCCGGTaGCTGCGGGTCACACGACCT +
Preference number: 4 (lower is better)
Translates to: AVNLSTETLRPGWARWFTFWISR*LRVTRP
Trigger: AGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAA...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525313.6
ENST00000528218.5
CDS-3UTR CCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGGGCCTCCAGAGAGCCTaGCGTTTCACTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLGLQRA*RFTSGS
Trigger: AGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGGGCCTCCAGAGAGCCTaGCGTTTCACTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEGLQRA*RFTSGS
Trigger: AGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTACATTGAGGCCTGGCTaGGCACGGTGGTTCACACCT +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPTLRPG*ARWFTP
Trigger: AGGTGTGAACCACCGTGCCCAGCCAGGCCTCAATGT...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGAGAAACATTGAGGCCTaGCTGGGCACGGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEERNIEA*LGTVVH
Trigger: GTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCT...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTAGAACTGGGTTGGGGTaGGGGAGCTTAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPARTGLG*GSLVEG
Trigger: ACCCTCGACTAAGCTCCCCCACCCCAACCCAGTTCT...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACATGTCCACAGAAACATTaGGGCCTGGCTGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: AVNLSTETLRPGWARWFTCPQKH*GLAGHG
Trigger: ACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACA...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGGTGAAATCCCATCTCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEVKSHL*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGAGATGGGATTTCAC...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACAACATTGAGGCCTGGCTaGGCACGGTGGTTCACACCT +
Preference number: 4 (lower is better)
Translates to: AVNLSTETLRPGWARWFTTLRPG*ARWFTP
Trigger: AGGTGTGAACCACCGTGCCCAGCCAGGCCTCAATGT...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR TCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGCTGGCTTACAGACAGTaGGACCAACGGAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEELAYRQ*DQRRTS
Trigger: ACTTGTTCTCCGTTGGTCTCACTGTCTGTAAGCCAG...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGTCCTCCTGTGTTCACTaGGGTGTGAGGACTGTGTAT +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLSSCVH*GVRTVY
Trigger: ATACACAGTCCTCACACCTCAGTGAACACAGGAGGA...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACTTTTCCTCAGTACCATaGTCATGTTCAGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENFSSVP*SCSVRW
Trigger: CCACCTTACTGAACATGAGCATGGTACTGAGGAAAA...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAGAGCTGAGTTGGGGGTaGAGGAGAACTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLELSWG*RRTGLG
Trigger: CCCCAACCCAGTTCTCCTGCACCCCCAACTCAGCTC...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACACCACGATCACACCACTaGACTTCCAGCCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: AVNLSTETLRPGWARWFTPRSHH*TSSLSD
Trigger: GTCACTCAGGCTGGAAGTGCAGTGGTGTGATCGTGG...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529228.5
CDS-3UTR CCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGGCCTCCAGAGAGCCTaGCGTTTCACTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYGLQRA*RFTSGS
Trigger: AGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGTGAAATCCCATCTCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPVKSHL*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGAGATGGGATTTCAC...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGAAACATTGAGGCCTaGCTGGGCACGGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYRNIEA*LGTVVH
Trigger: GTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCT...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTCTGGCTTACAGACAGTaGGACCAACGGAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPALAYRQ*DQRRTS
Trigger: ACTTGTTCTCCGTTGGTCTCACTGTCTGTAAGCCAG...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTATGTCCACAGAAACATTaGGGCCTGGCTGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLCPQKH*GLAGHG
Trigger: ACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACA...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACGCAAGAATCATCTGTTaGTTAGAAAGGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENARIIC*LERLEQ
Trigger: TTGCTCAAGCCTTTCTAATCAACAGATGATTCTTGC...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGGTGTTCACTGAGGTGTaGGGACTGTGTATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLVFTEV*GLCIGF
Trigger: AAAGCCTATACACAGTCCTCACACCTCAGTGAACAC...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTCCTCCTGTGTTCACTaGGGTGTGAGGACTGTGTAT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPASSCVH*GVRTVY
Trigger: ATACACAGTCCTCACACCTCAGTGAACACAGGAGGA...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACATGTTTGGTAATGTCTaGGAACCACATGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENMFGNV*EPHEDS
Trigger: AGAGTCTTCATGTGGTTCTCAGACATTACCAAACAT...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGATGTACAGTCAGGTGTaGGAACTGGGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLMYSQV*ELGEGF
Trigger: AAAGCCTTCACCCAGTTCTCACACCTGACTGTACAT...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGATGTACAGTCAGGTGTaGGAACTGGGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEMYSQV*ELGEGF
Trigger: AAAGCCTTCACCCAGTTCTCACACCTGACTGTACAT...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTATCACACCTGCATCGTaGGAATATGCCATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAITPAS*EYAISW
Trigger: CCAGGAGATGGCATATTCTCACGATGCAGGTGTGAT...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343338.11
CDS-3UTR TCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACGGACAAGTATATCAGTaGTGCACACCTAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENGQVYQ*CTPKRK
Trigger: TTTTCTCTTAGGTGTGCATCACTGATATACTTGTCC...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACTCGGGGTGCGGGAGCTaGGTTGGGGGTGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHSGCGS*VGGAGE
Trigger: TTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGA...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACGGATCTCCCGGTGCCTaGGGGTCACACGACCTACGG +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHGSPGA*GSHDLR
Trigger: CCGTAGGTCGTGTGACCCGCAGGCACCGGGAGATCC...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACGAAGGATTTGGGCTGTaGTTAAAACCTTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: IGPELGRGAGAELGVQENEGFGL*LKPLYH
Trigger: ATGGTACAAAGGTTTTAACCACAGCCCAAATCCTTC...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAAGAACTGGGTTGGGGTaGGGGAGCTTAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLRTGLG*GSLVEG
Trigger: ACCCTCGACTAAGCTCCCCCACCCCAACCCAGTTCT...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGTGTTCACTGAGGTGTaGGGACTGTGTATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPVFTEV*GLCIGF
Trigger: AAAGCCTATACACAGTCCTCACACCTCAGTGAACAC...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTGTGTTCACTGAGGTGTaGGGACTGTGTATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAVFTEV*GLCIGF
Trigger: AAAGCCTATACACAGTCCTCACACCTCAGTGAACAC...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACTCCTCCTGTGTTCACTaGGGTGTGAGGACTGTGTAT +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYSSCVH*GVRTVY
Trigger: ATACACAGTCCTCACACCTCAGTGAACACAGGAGGA...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTATGTACAGTCAGGTGTaGGAACTGGGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAMYSQV*ELGEGF
Trigger: AAAGCCTTCACCCAGTTCTCACACCTGACTGTACAT...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGGGATCTCCCGGTGCCTaGGGGTCACACGACCTACGG +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWGSPGA*GSHDLR
Trigger: CCGTAGGTCGTGTGACCCGCAGGCACCGGGAGATCC...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528218.5
CDS-3UTR GCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACTGCATCGTGAGAATATaGCATCTCCTGGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYCIVRI*HLLASR
Trigger: TCTGGAGGCCAGGAGATGGCATATTCTCACGATGCA...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343338.11
CDS-3UTR GCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAACCATTTCACAGTTTaGAGCACCCCAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYNHFTV*STPGEH
Trigger: GTGCTCACCTGGGGTGCTGCAAACTGTGAAATGGTT...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGCATTTCTCTGGTGTTTaGAAGGATTTGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEHFSGV*KDLGCG
Trigger: ACCACAGCCCAAATCCTTCCAAACACCAGAGAAATG...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGTGTTCACTGAGGTGTaGGGACTGTGTATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYVFTEV*GLCIGF
Trigger: AAAGCCTATACACAGTCCTCACACCTCAGTGAACAC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGATGGTTAGAAAGGCTTaGGCAAGTTCTGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLMVRKA*ASSEDL
Trigger: AAGGTCTTCAGAACTTGCTCAAGCCTTTCTAACCAT...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGATTAAGTCTGAACTCTaGTGTAAAGTGGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLIKSEL*CKVGCE
Trigger: CTCGCATCCCACTTTACATCAGAGTTCAGACTTAAT...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAACGTCAACAGAGTCTaGGCACCAGCCATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYNVNRV*APAISF
Trigger: GAAAGAAATGGCTGGTGCTCAGACTCTGTTGACGTT...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343338.11
ENST00000620374.4
CDS-3UTR TCA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACAAACGTCAACAGAGTCTaGGCACCAGCCATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AVNLSTETLRPGWARWFTNVNRV*APAISF
Trigger: GAAAGAAATGGCTGGTGCTCAGACTCTGTTGACGTT...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528218.5
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTGTGAGCACAGTGCAGTaGATTTGTCCACAGAAACAT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAVSTVQ*ICPQKH
Trigger: ATGTTTCTGTGGACAAATTCACTGCACTGTGCTCAC...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTATTGCAGCACCCCAGGTaGGCACAGTGCAGTGAATTT +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLLQHPR*AQCSEF
Trigger: AAATTCACTGCACTGTGCTCACCTGGGGTGCTGCAA...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GAAAATACCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAACTGAAGGGGGATCTCCCGGTGCCTaGGGGTCACACGACCTACGG +
Preference number: 4 (lower is better)
Translates to: ENTLQRSNHTSVYIITEGGSPGA*GSHDLR
Trigger: CCGTAGGTCGTGTGACCCGCAGGCACCGGGAGATCC...CCCTTCAGTTATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGTATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530643.5
CDS-3UTR GCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTTGCCAGCTTTGTTATaGGAGGTGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEELPALL*EVNRHV
Trigger: AACATGTCTGTTCACCTCGCATAACAAAGCTGGCAA...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACGAGCTGAGTTGGGGGTaGAGGAGAACTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHELSWG*RRTGLG
Trigger: CCCCAACCCAGTTCTCCTGCACCCCCAACTCAGCTC...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GGGAATAAAAGCAGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTGCAGCCTGGCGTTTCACTTCTaGATCTCCCGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GNKSSILKNYLLPHVHCSLAFHF*ISRCLR
Trigger: CCGCAGGCACCGGGAGATCCAGAAGTGAAACGCCAG...GCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCTGCTTTTATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR CCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCGTGCGGGAGCTGAGTTaGGGGTGCAGGAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPVRELS*GCRRTG
Trigger: CCCAGTTCTCCTGCACCCCCAACTCAGCTCCCGCAC...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTACTGGCTTACAGACAGTaGGACCAACGGAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLLAYRQ*DQRRTS
Trigger: ACTTGTTCTCCGTTGGTCTCACTGTCTGTAAGCCAG...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp TATAGTCTCTTCAACACTTGGTCCCTGCAACGCAGCAATCACACTTCTGTGTATGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: YSLFNTWSLQRSNHTSVYVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...ATACACAGAAGTGTGATTGCTGCGTTGCAGGGACCAAGTGTTGAAGAGACTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526501.5
CDS-3UTR TCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTATGGTTAGAAAGGCTTaGGCAAGTTCTGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAMVRKA*ASSEDL
Trigger: AAGGTCTTCAGAACTTGCTCAAGCCTTTCTAACCAT...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTATGGTTAGAAAGGCTTaGGCAAGTTCTGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPMVRKA*ASSEDL
Trigger: AAGGTCTTCAGAACTTGCTCAAGCCTTTCTAACCAT...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCTTCTGGATCTCCCGGTaGCTGCGGGTCACACGACCT +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPFWISR*LRVTRP
Trigger: AGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAA...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTTTTCCTCAGTACCATaGTCATGTTCAGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAFSSVP*SCSVRW
Trigger: CCACCTTACTGAACATGAGCATGGTACTGAGGAAAA...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTTGCCAGCTTTGTTATaGGAGGTGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPALPALL*EVNRHV
Trigger: AACATGTCTGTTCACCTCGCATAACAAAGCTGGCAA...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGCGTTTCACTTCTaGATCTCCCGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWLAFHF*ISRCLR
Trigger: CCGCAGGCACCGGGAGATCCAGAAGTGAAACGCCAG...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525313.6
ENST00000528218.5
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGGTGTTTGGAAGGATTTaGGCTGTGGTTAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEVFGRI*AVVKTF
Trigger: AAAGGTTTTAACCACAGCCCAAATCCTTCCAAACAC...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTTTTCTCCTGCTTCTCTaGGATTTCCTCTTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPFLLLL*DFLLGK
Trigger: CTTTCCTAAGAGGAAATCCCAGAGAAGCAGGAGAAA...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343338.11
ENST00000620374.4
CDS-3UTR CCA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTTTCTCCTGCTTCTCTaGGATTTCCTCTTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SFIELLGCSTTVRGGSPAFLLLL*DFLLGK
Trigger: CTTTCCTAAGAGGAAATCCCAGAGAAGCAGGAGAAA...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343338.11
ENST00000620374.4
CDS-3UTR CCA 90 bp TATAGTCTCTTCAACACTTGGTCCCTGCAACGCAGCAATCACACTTCTGTGTATCTCAGGAGGCTGAAGTaGGAAGAAGGCTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: YSLFNTWSLQRSNHTSVYLRRLK*EEGSSP
Trigger: TGGGCTCGAGCCTTCTTCCCACTTCAGCCTCCTGAG...ATACACAGAAGTGTGATTGCTGCGTTGCAGGGACCAAGTGTTGAAGAGACTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526501.5
CDS-3UTR CCA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACAGTGAAATCCCATCTCTaGGTTACCTGCTTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: AVNLSTETLRPGWARWFTVKSHL*VTCFVH
Trigger: ATGAACGAAGCAGGTAACCCAGAGATGGGATTTCAC...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525313.6
CDS-3UTR TCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR TCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGTGTCCACAGAAACATTaGGGCCTGGCTGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWCPQKH*GLAGHG
Trigger: ACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACA...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR TCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGAGACACAGCATCTACTaGTTTGAGAATAGAATGACA +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEERHSIY*FENRMT
Trigger: TGTCATTCTATTCTCAAATCAGTAGATGCTGTGTCT...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTTCTGGATCTCCCGGTaGCTGCGGGTCACACGACCT +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEAFWISR*LRVTRP
Trigger: AGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAA...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525313.6
ENST00000528218.5
CDS-3UTR GCA 90 bp CAGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTGCAGCATTATTCACAATTCTGGATCTCCCGGTaGCTGCGGGTCACACGACCT +
Preference number: 4 (lower is better)
Translates to: QHLEELSAPSCSLQHYSQFWISR*LRVTRP
Trigger: AGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAA...TTGTGAATAATGCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530643.5
CDS-3UTR CCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCCTGGCGTTTCACTTCTaGATCTCCCGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEALAFHF*ISRCLR
Trigger: CCGCAGGCACCGGGAGATCCAGAAGTGAAACGCCAG...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525313.6
ENST00000528218.5
CDS-3UTR CCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGACATTGAGGCCTGGCTaGGCACGGTGGTTCACACCT +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWTLRPG*ARWFTP
Trigger: AGGTGTGAACCACCGTGCCCAGCCAGGCCTCAATGT...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR CCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGAAGGATTTGGGCTGTaGTTAAAACCTTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPEGFGL*LKPLYH
Trigger: ATGGTACAAAGGTTTTAACCACAGCCCAAATCCTTC...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGTCATTCCCACCCACCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWSFPPT*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGGTGGGTGGGAATGA...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525313.6
CDS-3UTR TCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEAVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR TCA 90 bp CAGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTGCAGCATTATTCACAAGTTGCTCCAGGCAGGTaGTCAGGCCTGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: QHLEELSAPSCSLQHYSQVAPGR*SGLAYR
Trigger: TCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAAC...TTGTGAATAATGCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR TCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGTCCACAGAAACATTaGGGCCTGGCTGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEACPQKH*GLAGHG
Trigger: ACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACA...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR TCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGCAAGAATCATCTGTTaGTTAGAAAGGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYARIIC*LERLEQ
Trigger: TTGCTCAAGCCTTTCTAATCAACAGATGATTCTTGC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGAGAAATACTCTTGTGTaGTCTGGAGACTTATATTTC +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEERNTLV*SGDLYF
Trigger: GAAATATAAGTCTCCAGAGCACACAAGAGTATTTCT...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGGGCCTCCAGAGAGCCTaGCGTTTCACTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWGLQRA*RFTSGS
Trigger: AGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525313.6
ENST00000528218.5
CDS-3UTR CCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCACATTGAGGCCTGGCTaGGCACGGTGGTTCACACCT +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEATLRPG*ARWFTP
Trigger: AGGTGTGAACCACCGTGCCCAGCCAGGCCTCAATGT...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR CCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGAAGGATTTGGGCTGTaGTTAAAACCTTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYEGFGL*LKPLYH
Trigger: ATGGTACAAAGGTTTTAACCACAGCCCAAATCCTTC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTACATTTCTCTGGTGTTTaGAAGGATTTGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLHFSGV*KDLGCG
Trigger: ACCACAGCCCAAATCCTTCCAAACACCAGAGAAATG...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTACTCTTGTGTGCTCTaGAGACTTATATTTCATGAA +
Preference number: 4 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEEYSCVL*RLIFHE
Trigger: TTCATGAAATATAAGTCTCCAGAGCACACAAGAGTA...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp TGGTCCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAACTGAAGGGAATAACGTTTGCGGATGCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: WSLQRSNHTSVYIITEGNNVCGC*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGCATCCGCAAACGTT...ATTCCCTTCAGTTATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526501.5
CDS-3UTR TCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCTTGCAGCACCCCAGGTaGGCACAGTGCAGTGAATTT +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPLQHPR*AQCSEF
Trigger: AAATTCACTGCACTGTGCTCACCTGGGGTGCTGCAA...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp AGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTGCAGCATTATTCACAATAGGTCCTCAGGAGGCTaGAGTGGGAAGAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: SILKNYLLPHVHCSIIHNRSSGG*SGKKAR
Trigger: TCGAGCCTTCTTCCCACTTCAGCCTCCTGAGGACCT...ATTGTGAATAATGCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526501.5
CDS-3UTR GCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTATTTTCCTCAGTACCATaGTCATGTTCAGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLFSSVP*SCSVRW
Trigger: CCACCTTACTGAACATGAGCATGGTACTGAGGAAAA...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AACCACAAAGAAAATACCCTGCAACGCAGCAATCACACTTCTGTGTATATAATACTGGCGTTTCACTTCTaGATCTCCCGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: NHKENTLQRSNHTSVYIILAFHF*ISRCLR
Trigger: CCGCAGGCACCGGGAGATCCAGAAGTGAAACGCCAG...TATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGTATTTTCTTTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530643.5
CDS-3UTR CCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCGGCCTCCAGAGAGCCTaGCGTTTCACTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEAGLQRA*RFTSGS
Trigger: AGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525313.6
ENST00000528218.5
CDS-3UTR CCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCAGAAACATTGAGGCCTaGCTGGGCACGGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEARNIEA*LGTVVH
Trigger: GTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCT...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR CCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACATGAGAAGACATAGCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHMRRHS*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGCTATGTCTTCTCAT...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343338.11
ENST00000354599.10
CDS-3UTR CCA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTTACTCTTGTGTGCTCTaGAGACTTATATTTCATGAA +
Preference number: 4 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPYSCVL*RLIFHE
Trigger: TTCATGAAATATAAGTCTCCAGAGCACACAAGAGTA...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
3UTR CAA 72 bp GGTGCAGGTGTCTTGTCTGCATCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAGGTGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: GAGVLSASWRCF*PALLCEVNRHV
Trigger: AACATGTCTGTTCACCTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGATGCAGACAAGACACCTGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAATGTTTGGTAATGTCTaGGAACCACATGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLMFGNV*EPHEDS
Trigger: AGAGTCTTCATGTGGTTCTCAGACATTACCAAACAT...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGAAATACTCTTGTGTaGTCTGGAGACTTATATTTC +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYRNTLV*SGDLYF
Trigger: GAAATATAAGTCTCCAGAGCACACAAGAGTATTTCT...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCAACCATTTCACAGTTTaGAGCACCCCAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPNHFTV*STPGEH
Trigger: GTGCTCACCTGGGGTGCTGCAAACTGTGAAATGGTT...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCATCTCTGGGTTACCTaGTTCGTTCATTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWHLWVT*FVHSHP
Trigger: TGGGTGGGAATGAACGAAGCAGGTAACCCAGAGATG...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525313.6
CDS-3UTR CCA 90 bp CAACGCAGCAATCACACTTCTGTGTATATAATAACTGAAGGGAATAAAAGCAGCGGCCTCCAGAGAGCCTaGCGTTTCACTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: QRSNHTSVYIITEGNKSSGLQRA*RFTSGS
Trigger: AGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC...GCTGCTTTTATTCCCTTCAGTTATTATATACACAGAAGTGTGATTGCTGCGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR CCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAGTGTTTGGAAGGATTTaGGCTGTGGTTAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLVFGRI*AVVKTF
Trigger: AAAGGTTTTAACCACAGCCCAAATCCTTCCAAACAC...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCATGAGAAGACATAGCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPMRRHS*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGCTATGTCTTCTCAT...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343338.11
ENST00000354599.10
CDS-3UTR CCA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACTACTCTTGTGTGCTCTaGAGACTTATATTTCATGAA +
Preference number: 4 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYYSCVL*RLIFHE
Trigger: TTCATGAAATATAAGTCTCCAGAGCACACAAGAGTA...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp AGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTGCAGCATTATTCACAATAACGTTTGCGGATGCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SILKNYLLPHVHCSIIHNNVCGC*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGCATCCGCAAACGTT...ATTGTGAATAATGCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR TCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCCTGGCTTACAGACAGTaGGACCAACGGAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEALAYRQ*DQRRTS
Trigger: ACTTGTTCTCCGTTGGTCTCACTGTCTGTAAGCCAG...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525313.6
ENST00000528218.5
CDS-3UTR TCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAAGACACAGCATCTACTaGTTTGAGAATAGAATGACA +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLRHSIY*FENRMT
Trigger: TGTCATTCTATTCTCAAATCAGTAGATGCTGTGTCT...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACGTGAGCACAGTGCAGTaGATTTGTCCACAGAAACAT +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHVSTVQ*ICPQKH
Trigger: ATGTTTCTGTGGACAAATTCACTGCACTGTGCTCAC...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp TGGTCCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAACTGAAGGGAATTCAACACTTGGTCCCTaGAACGCAGCAATCACACTT +
Preference number: 4 (lower is better)
Translates to: WSLQRSNHTSVYIITEGNSTLGP*NAAITL
Trigger: AAGTGTGATTGCTGCGTTGCAGGGACCAAGTGTTGA...ATTCCCTTCAGTTATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526501.5
CDS-3UTR CCA 90 bp AACCACAAAGAAAATACCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAGGCCTCCAGAGAGCCTaGCGTTTCACTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: NHKENTLQRSNHTSVYIIGLQRA*RFTSGS
Trigger: AGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC...TATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGTATTTTCTTTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530643.5
CDS-3UTR CCA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCACAAAGAAAATACCTaGATGTCCGTCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWHKENT*MSVCCL
Trigger: GAGGCAGCAGACGGACATCCAGGTATTTTCTTTGTG...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528218.5
CDS-3UTR TCA 90 bp AGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTGCAGCATTATTCACAATCTGGCTTACAGACAGTaGGACCAACGGAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: SILKNYLLPHVHCSIIHNLAYRQ*DQRRTS
Trigger: ACTTGTTCTCCGTTGGTCTCACTGTCTGTAAGCCAG...ATTGTGAATAATGCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR TCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACATGGTTAGAAAGGCTTaGGCAAGTTCTGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHMVRKA*ASSEDL
Trigger: AAGGTCTTCAGAACTTGCTCAAGCCTTTCTAACCAT...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR GCA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTAAGAAATACTCTTGTGTaGTCTGGAGACTTATATTTC +
Preference number: 4 (lower is better)
Translates to: APPQLEEAALLTDYSRFLRNTLV*SGDLYF
Trigger: GAAATATAAGTCTCCAGAGCACACAAGAGTATTTCT...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCCATTTCTCTGGTGTTTaGAAGGATTTGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPHFSGV*KDLGCG
Trigger: ACCACAGCCCAAATCCTTCCAAACACCAGAGAAATG...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACGCAAGAATCATCTGTTaGTTAGAAAGGCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHARIIC*LERLEQ
Trigger: TTGCTCAAGCCTTTCTAATCAACAGATGATTCTTGC...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACGGACAAGTATATCAGTaGTGCACACCTAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHGQVYQ*CTPKRK
Trigger: TTTTCTCTTAGGTGTGCATCACTGATATACTTGTCC...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp TATAGTCTCTTCAACACTTGGTCCCTGCAACGCAGCAATCACACTTCTGTGTATATAAAAGCAGCATCTTaGAGAATTATCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: YSLFNTWSLQRSNHTSVYIKAAS*RIICSL
Trigger: GAGGGAGCAGATAATTCTTCAAGATGCTGCTTTTAT...ATACACAGAAGTGTGATTGCTGCGTTGCAGGGACCAAGTGTTGAAGAGACTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526501.5
CDS-3UTR CCA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACGTGTTTGGAAGGATTTaGGCTGTGGTTAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHVFGRI*AVVKTF
Trigger: AAAGGTTTTAACCACAGCCCAAATCCTTCCAAACAC...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR TCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCATGTTTGGTAATGTCTaGGAACCACATGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPMFGNV*EPHEDS
Trigger: AGAGTCTTCATGTGGTTCTCAGACATTACCAAACAT...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCGTGTTTGGAAGGATTTaGGCTGTGGTTAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPVFGRI*AVVKTF
Trigger: AAAGGTTTTAACCACAGCCCAAATCCTTCCAAACAC...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTTTCTCCTGCTTCTCTaGGATTTCCTCTTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEAFLLLL*DFLLGK
Trigger: CTTTCCTAAGAGGAAATCCCAGAGAAGCAGGAGAAA...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528218.5
CDS-3UTR CCA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCTTAGGAAAGATTCTCTaGACAAATCACACCATCTCC +
Preference number: 4 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPLGKIL*TNHTIS
Trigger: GGAGATGGTGTGATTTGTCCAGAGAATCTTTCCTAA...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620374.4
CDS-3UTR TCA 90 bp CAGCATCTTGAAGAATTATCTGCTCCCTCATGTTCACTGCAGCATTATTCACAAATAAAAGCAGCATCTTaGAGAATTATCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QHLEELSAPSCSLQHYSQIKAAS*RIICSL
Trigger: GAGGGAGCAGATAATTCTTCAAGATGCTGCTTTTAT...TTGTGAATAATGCTGCAGTGAACATGAGGGAGCAGATAATTCTTCAAGATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR CCA 90 bp TTGGGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTTAGGAAAGATTCTCTaGACAAATCACACCATCTCC +
Preference number: 4 (lower is better)
Translates to: LGKMRRHSSEFVHRNIEALGKIL*TNHTIS
Trigger: GGAGATGGTGTGATTTGTCCAGAGAATCTTTCCTAA...GGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528218.5
CDS-3UTR GCA 90 bp AATACCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAACTGAAGGGAATACAAAGAAAATACCCTaGAACGCAGCAATCACACTT +
Preference number: 4 (lower is better)
Translates to: NTLQRSNHTSVYIITEGNTKKIP*NAAITL
Trigger: AAGTGTGATTGCTGCGTTGCAGGGTATTTTCTTTGT...ATTCCCTTCAGTTATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530643.5
CDS GCA 90 bp GGCCTCCAGAGAGCCTGGCGTTTCACTTCTGGATCTCCCGGTGCCTaGGGGTCACACGACCTACGGCTAGCAGGGGACACAGAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: GLQRAWRFTSGSPGA*GSHDLRLAGDTEPR
Trigger: CCGCGGCTCTGTGTCCCCTGCTAGCCGTAGGTCGTGTGACCCGCAGGCACCGGGAGATCCAGAAGTGAAACGCCAGGCTCTCTGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000330692.11
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000429541.6
ENST00000525502.5
ENST00000526601.5
ENST00000527386.1
ENST00000528218.5
ENST00000528410.5
ENST00000529678.5
ENST00000532539.1
ENST00000533036.5
ENST00000618467.4
ENST00000620374.4
ENST00000649622.1
CDS-3UTR CAA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTTGTCCACAGAAACATaGAGGCCTGGCTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEELSTET*RPGWAR
Trigger: CCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAA...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACGCTTTATTGAGCTGCTaGGCTGCTCCACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: IGPELGRGAGAELGVQENALLSC*AAPPQL
Trigger: TAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGC...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS CCA 90 bp AGAAAGGATGCAGCCACGATGAAAGATAGCATAGGCCGGGCACACTaGTTCACACCAGCTCACACCTGGAACCCCAGCACTTCGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RKDAATMKDSIGRAH*FTPAHTWNPSTSGD
Trigger: GTCTCCCGAAGTGCTGGGGTTCCAGGTGTGAGCTGGTGTGAACCAGTGTGCCCGGCCTATGCTATCTTTCATCGTGGCTGCATCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528636.1
ENST00000649622.1
CDS-3UTR CAA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACTCATTTCTCTGGTGTTaGGAAGGATTTGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: IGPELGRGAGAELGVQENSFLWC*EGFGLW
Trigger: CCACAGCCCAAATCCTTCCAAACACCAGAGAAATGA...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS TCA 90 bp ACTTGTAGTCCCAACTACTCAGAAGGCTGGAGTGGGAGAATCACCTaGACCTGGGAAGTGGAGGCCGCAGTGAGCCACGATCACACCACT +
Preference number: 5 (lower is better)
Translates to: TCSPNYSEGWSGRIT*TWEVEAAVSHDHTT
Trigger: AGTGGTGTGATCGTGGCTCACTGCGGCCTCCACTTCCCAGGTTCAGGTGATTCTCCCACTCCAGCCTTCTGAGTAGTTGGGACTACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS-3UTR CAA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACATTGTCCACAGAAACATaGAGGCCTGGCTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: AVNLSTETLRPGWARWFTLSTET*RPGWAR
Trigger: CCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAA...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS GCA 90 bp AAGACAAGCCTGAGTAGCATGGTGAAATCCCATCTCTGGGTTACCTaGTTCGTTCATTCCCACCCACCTGGATGTCCGTCTGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: KTSLSSMVKSHLWVT*FVHSHPPGCPSAAS
Trigger: GGAGGCAGCAGACGGACATCCAGGTGGGTGGGAATGAACGAAGCAGGTAACCCAGAGATGGGATTTCACCATGCTACTCAGGCTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525313.6
CDS-3UTR CAA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGGCTTTATTGAGCTGCTaGGCTGCTCCACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLALLSC*AAPPQL
Trigger: TAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGC...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTATTGTCCACAGAAACATaGAGGCCTGGCTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: APPQLEEAALLTDYSRFLLSTET*RPGWAR
Trigger: CCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAA...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGTCATTTCTCTGGTGTTaGGAAGGATTTGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLSFLWC*EGFGLW
Trigger: CCACAGCCCAAATCCTTCCAAACACCAGAGAAATGA...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTTATTGAGCTGCTaGGCTGCTCCACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPALLSC*AAPPQL
Trigger: TAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGC...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp ATAGGGCCAGAACTAGGTCGGGGTGCGGGAGCTGAGTTGGGGGTGCAGGAGAACCTGTGGTTAAAACCTTaGTACCATGTTTCACATTTG +
Preference number: 5 (lower is better)
Translates to: IGPELGRGAGAELGVQENLWLKP*YHVSHL
Trigger: CAAATGTGAAACATGGTACAAAGGTTTTAACCACAG...GTTCTCCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTAGTTCTGGCCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTTCATTTCTCTGGTGTTaGGAAGGATTTGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPSFLWC*EGFGLW
Trigger: CCACAGCCCAAATCCTTCCAAACACCAGAGAAATGA...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp TTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACGCTTTATTGAGCTGCTaGGCTGCTCCACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: FIELLGCSTTVRGGSPAYALLSC*AAPPQL
Trigger: TAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGC...GTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp AGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAG +
Preference number: 5 (lower is better)
Translates to: SFIELLGCSTTVRGGSPASWRCF*PALLCE
Trigger: CTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGA...AGCAGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp AGTCCTGTGGGAGGGGAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGCTCTCAGTATTCTTTTaGGGAATGCATCTTGTATGC +
Preference number: 5 (lower is better)
Translates to: SPVGGEGNGLIRVTLTEELSVFF*GMHLVC
Trigger: GCATACAAGATGCATTCCCAAAAAGAATACTGAGAG...CTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTCCCCTCCCACAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GGTAAAATGAGAAGACATAGCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGTTGTCCACAGAAACATaGAGGCCTGGCTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: GKMRRHSSEFVHRNIEAWLSTET*RPGWAR
Trigger: CCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAA...CCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCTATGTCTTCTCATTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR CAA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACAGACATAGCAGTGAATTaGTCCACAGAAACATTGAGG +
Preference number: 5 (lower is better)
Translates to: AVNLSTETLRPGWARWFTDIAVN*STETLR
Trigger: CCTCAATGTTTCTGTGGACAAATTCACTGCTATGTC...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR CAA 90 bp GCAAGCTTTATTGAGCTGCTTGGCTGCTCCACCACAGTTAGAGGAGGCAGCCCTCTCTCAGTATTCTTTTaGGGAATGCATCTTGTATGC +
Preference number: 5 (lower is better)
Translates to: ASFIELLGCSTTVRGGSPLSVFF*GMHLVC
Trigger: GCATACAAGATGCATTCCCAAAAAGAATACTGAGAG...AGGGCTGCCTCCTCTAACTGTGGTGGAGCAGCCAAGCAGCTCAATAAAGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GAGAGCACAAGGGACCGTATTGTAAGTCCTGTGGGAGGGGAAGGGAACGGTCTGCTGTGGTTAAAACCTTaGTACCATGTTTCACATTTG +
Preference number: 5 (lower is better)
Translates to: ESTRDRIVSPVGGEGNGLLWLKP*YHVSHL
Trigger: CAAATGTGAAACATGGTACAAAGGTTTTAACCACAG...CAGACCGTTCCCTTCCCCTCCCACAGGACTTACAATACGGTCCCTTGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS CCA 90 bp ACAGGATGGTATGCGAACAGAGAGGAAAACTGCCGCAGAGACCAATaGGACAGAACAGAGAGCCCAGAATTAAACTCATGCATATCCACT +
Preference number: 5 (lower is better)
Translates to: TGWYANREENCRRDQ*DRTESPELNSCIST
Trigger: AGTGGATATGCATGAGTTTAATTCTGGGCTCTCTGTTCTGTCCCATTGGTCTCTGCGGCAGTTTTCCTCTCTGTTCGCATACCATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS-3UTR CAA 90 bp GCAGTGAATTTGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACACTCTCAGTATTCTTTTaGGGAATGCATCTTGTATGC +
Preference number: 5 (lower is better)
Translates to: AVNLSTETLRPGWARWFTLSVFF*GMHLVC
Trigger: GCATACAAGATGCATTCCCAAAAAGAATACTGAGAG...TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525313.6
ENST00000528218.5
ENST00000529228.5
CDS-3UTR CAA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTACTCTCAGTATTCTTTTaGGGAATGCATCTTGTATGC +
Preference number: 5 (lower is better)
Translates to: APPQLEEAALLTDYSRFLLSVFF*GMHLVC
Trigger: GCATACAAGATGCATTCCCAAAAAGAATACTGAGAG...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACTCATTTCTCTGGTGTTaGGAAGGATTTGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHSFLWC*EGFGLW
Trigger: CCACAGCCCAAATCCTTCCAAACACCAGAGAAATGA...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GCTCCACCACAGTTAGAGGAGGCAGCCCTGCTTACAGACTATAGCAGGTTTTTACTGTGGTTAAAACCTTaGTACCATGTTTCACATTTG +
Preference number: 5 (lower is better)
Translates to: APPQLEEAALLTDYSRFLLWLKP*YHVSHL
Trigger: CAAATGTGAAACATGGTACAAAGGTTTTAACCACAG...TAAAAACCTGCTATAGTCTGTAAGCAGGGCTGCCTCCTCTAACTGTGGTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp GAAGGGAACGGTCTGATCAGGGTGACCCTAACAGAAGAGTATTATTCTAAACACTCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAG +
Preference number: 5 (lower is better)
Translates to: EGNGLIRVTLTEEYYSKHSWRCF*PALLCE
Trigger: CTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGA...GTGTTTAGAATAATACTCTTCTGTTAGGGTCACCCTGATCAGACCGTTCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp ACTCAACACAGGGATTCAGTGTCATTTCTGAACGTGTCCTTGCTTATTTTTCCCTCCTGGAGATGTTTTTaGCCAGCTTTGTTATGCGAG +
Preference number: 5 (lower is better)
Translates to: TQHRDSVSFLNVSLLIFPSWRCF*PALLCE
Trigger: CTCGCATAACAAAGCTGGCAAAAAACATCTCCAGGA...GGGAAAAATAAGCAAGGACACGTTCAGAAATGACACTGAATCCCTGTGTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000620374.4
CDS-3UTR CAA 90 bp CAACGCAGCAATCACACTTCTGTGTATATAATAACTGAAGGGAATAAAAGCAGCAATAAAAGCAGCATCTaGAAGAATTATCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: QRSNHTSVYIITEGNKSSNKSSI*KNYLLP
Trigger: AGGGAGCAGATAATTCTTCAAGATGCTGCTTTTATT...GCTGCTTTTATTCCCTTCAGTTATTATATACACAGAAGTGTGATTGCTGCGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526501.5
ENST00000530643.5
CDS-3UTR CAA 90 bp CACAAAGAAAATACCCTGCAACGCAGCAATCACACTTCTGTGTATATAATAACTAATAAAAGCAGCATCTaGAAGAATTATCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: HKENTLQRSNHTSVYIITNKSSI*KNYLLP
Trigger: AGGGAGCAGATAATTCTTCAAGATGCTGCTTTTATT...AGTTATTATATACACAGAAGTGTGATTGCTGCGTTGCAGGGTATTTTCTTTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530643.5
CDS TCA 72 bp GCGGTGTGCCCCTGTAGTTCCAGGTCCTCAGGAGGCTaGAGTGGGAAGAAGGCTCGAGCCCAGGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: AVCPCSSRSSGG*SGKKARAQEAE
Trigger: CTCTGCTTCCTGGGCTCGAGCCTTCTTCCCACTTCAGCCTCCTGAGGACCTGGAACTACAGGGGCACACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525502.5
ENST00000528636.1
ENST00000649622.1
CDS TCA 72 bp CCCAACTACTCAGAAGGCTGGAGTGGGAGAATCACCTaGACCTGGGAAGTGGAGGCCGCAGTGAGCCACGAT +
Preference number: 6 (lower is better)
Translates to: PNYSEGWSGRIT*TWEVEAAVSHD
Trigger: ATCGTGGCTCACTGCGGCCTCCACTTCCCAGGTTCAGGTGATTCTCCCACTCCAGCCTTCTGAGTAGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS CCA 72 bp GCAGCCACGATGAAAGATAGCATAGGCCGGGCACACTaGTTCACACCAGCTCACACCTGGAACCCCAGCACT +
Preference number: 6 (lower is better)
Translates to: AATMKDSIGRAH*FTPAHTWNPST
Trigger: AGTGCTGGGGTTCCAGGTGTGAGCTGGTGTGAACCAGTGTGCCCGGCCTATGCTATCTTTCATCGTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528636.1
ENST00000649622.1
CDS TCA 72 bp AAGACAAGCCTGAGTAGCATGGTGAAATCCCATCTCTaGACCTGGGAAGTGGAGGCCGCAGTGAGCCACGAT +
Preference number: 6 (lower is better)
Translates to: KTSLSSMVKSHL*TWEVEAAVSHD
Trigger: ATCGTGGCTCACTGCGGCCTCCACTTCCCAGGTTCAGAGATGGGATTTCACCATGCTACTCAGGCTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529228.5
ENST00000533036.5
CDS CAA 90 bp CATTTCACAGTTTGCAGCACCCCAGGTGAGCACAGTGCAGTGAATTaGTCCACAGAAACATTGAGGCCTGGCTGGGCACGGTGGTTCACA +
Preference number: 6 (lower is better)
Translates to: HFTVCSTPGEHSAVN*STETLRPGWARWFT
Trigger: TGTGAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGCACTGTGCTCACCTGGGGTGCTGCAAACTGTGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399602.9
ENST00000526540.5
ENST00000620374.4
CDS CCA 72 bp AAGACAAGCCTGAGTAGCATGGTGAAATCCCATCTCTaGGTTACCTGCTTCGTTCATTCCCACCCACCTGGA +
Preference number: 6 (lower is better)
Translates to: KTSLSSMVKSHL*VTCFVHSHPPG
Trigger: TCCAGGTGGGTGGGAATGAACGAAGCAGGTAACCCAGAGATGGGATTTCACCATGCTACTCAGGCTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525313.6
CDS TCA 72 bp GCTCACTTCAGGCCAGAAGTTCAGAACCAGCCTGGGTaGCACAGAGAGATCTCATCTCACAAAAATGCCTTT +
Preference number: 6 (lower is better)
Translates to: AHFRPEVQNQPG*HREISSHKNAF
Trigger: AAAGGCATTTTTGTGAGATGAGATCTCTCTGTGTCACCCAGGCTGGTTCTGAACTTCTGGCCTGAAGTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS GCA 72 bp TCACAATTGTCAAGATATAAAGACAAGCTAAACGTTTaGGGATGCTGGATGTCCGTCTGCTGCCTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SQLSRYKDKLNV*GCWMSVCCLLS
Trigger: AGACAGGAGGCAGCAGACGGACATCCAGCATCCGCAAACGTTTAGCTTGTCTTTATATCTTGACAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526501.5
ENST00000529085.5
ENST00000530643.5
CDS GCA 72 bp CAGCAACAAAAATGTGTCAGTCTTCTTGTACAGAAATaGCTTTCCAAGAGAATCAGGCACCACGGCTCATGC +
Preference number: 6 (lower is better)
Translates to: QQQKCVSLLVQK*LSKRIRHHGSC
Trigger: GCATGAGCCGTGGTGCCTGATTCTCTTGGAAAGGCATTTCTGTACAAGAAGACTGACACATTTTTGTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS CCA 72 bp AAGATACAATACAGACAGTATAGTCTCTTCAACACTTaGTCCTGGATGTCCGTCTGCTGCCTCCTGTCTCTT +
Preference number: 6 (lower is better)
Translates to: KIQYRQYSLFNT*SWMSVCCLLSL
Trigger: AAGAGACAGGAGGCAGCAGACGGACATCCAGGACCAAGTGTTGAAGAGACTATACTGTCTGTATTGTATCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS CAA 90 bp CTGGGTTATATATTCCCCGACAGCAACAAAAATGTGTCAGTCTTCTaGTACAGAAATGCCTTTCCAAGAGAATCAGGCACCACGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LGYIFPDSNKNVSVF*YRNAFPRESGTTAH
Trigger: ATGAGCCGTGGTGCCTGATTCTCTTGGAAAGGCATTTCTGTACAAGAAGACTGACACATTTTTGTTGCTGTCGGGGAATATATAACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS CAA 72 bp GAGCAAGAGATAAAGACACTGCTGCACTCTTCATATTaGCAGGGTTTTTCCTCAGTACCATGCTCATGTTCA +
Preference number: 6 (lower is better)
Translates to: EQEIKTLLHSSY*QGFSSVPCSCS
Trigger: TGAACATGAGCATGGTACTGAGGAAAAACCCTGCAAATATGAAGAGTGCAGCAGTGTCTTTATCTCTTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000005082.13
ENST00000343338.11
ENST00000354599.10
ENST00000399602.9
ENST00000429541.6
ENST00000526601.5
ENST00000620374.4
ENST00000649622.1
CDS CAA 72 bp ATATTCCCCGACAGCAACAAAAATGTGTCAGTCTTCTaGTACAGAAATGCCTTTCCAAGAGAATCAGGCACC +
Preference number: 6 (lower is better)
Translates to: IFPDSNKNVSVF*YRNAFPRESGT
Trigger: GGTGCCTGATTCTCTTGGAAAGGCATTTCTGTACAAGAAGACTGACACATTTTTGTTGCTGTCGGGGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS CCA 72 bp TCTAACATCAGGGCTCCCAGATATATAAAGCAAATATaGAGAGAAGTGAAGCAAGATGTACACAGCAATACA +
Preference number: 6 (lower is better)
Translates to: SNIRAPRYIKQI*REVKQDVHSNT
Trigger: TGTATTGCTGTGTACATCTTGCTTCACTTCTCTCCATATTTGCTTTATATATCTGGGAGCCCTGATGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS GCA 72 bp AGTATACAAAGCAACTCAGGACTTAGAAGAGATATTTaGACACCCATGTTTACTGTACCACTATTCAGAAAA +
Preference number: 6 (lower is better)
Translates to: SIQSNSGLRRDI*TPMFTVPLFRK
Trigger: TTTTCTGAATAGTGGTACAGTAAACATGGGTGTGCAAATATCTCTTCTAAGTCCTGAGTTGCTTTGTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649622.1
CDS CAA 72 bp ATGATGAAACAAAGCAGAGAGCCCAGAAATAAACCCTaGTGGATAAAATCAAGTAATTTTCCACAAGGTATC +
Preference number: 6 (lower is better)
Translates to: MMKQSREPRNKP*WIKSSNFPQGI
Trigger: GATACCTTGTGGAAAATTACTTGATTTTATCCACAAGGGTTTATTTCTGGGCTCTCTGCTTTGTTTCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649622.1