RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF185 (Homo sapiens)

Ensembl gene IDs: ENSG00000147394

Ensembl transcript IDs: ENST00000318504.11, ENST00000318529.12, ENST00000324823.10, ENST00000370268.8, ENST00000370270.6, ENST00000426821.6, ENST00000436731.6, ENST00000447792.2, ENST00000449285.6, ENST00000454925.1, ENST00000535861.5, ENST00000539731.5

Found 1437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCACAGATGGCAGAGTCCAGCTGAACCTGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTACATCTGCCCAGCCATCCAACGAGTT +
Preference number: 1 (lower is better)
Translates to: AHRWQSPAEPEQRIG*LHGQAYICPAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTCAGGTTCAGCTGGACTCTGCCATCTGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR GCA 90 bp ACAGATGGCAGAGTCCAGCTGAACCTGAGCAGAGGATCGGCTGACTaGATGGACAGGCTTACATCTGCCCAGCCATCCAACGAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: TDGRVQLNLSRGSAD*MDRLTSAQPSNEFP
Trigger: TGGAAACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTCAGGTTCAGCTGGACTCTGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 90 bp ATTTCACACCTTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTGGCAGGAACTGTGTACCCTCTGCAC +
Preference number: 1 (lower is better)
Translates to: ISHLLLFASLCLWEA*REGVNLAGTVYPLH
Trigger: GTGCAGAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 90 bp AGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGACGTTGCTATAGCGTGCAGATACTGG +
Preference number: 1 (lower is better)
Translates to: RVWSAATWRLLLHGE*VLNAADVAIACRYW
Trigger: CCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR GCA 90 bp TTGGCACACACTGAGCACAAAATCAATGCTTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGCTCTGTAGCGTTCTGCGCAATGCAA +
Preference number: 1 (lower is better)
Translates to: LAHTEHKINACFCGC*SGKSMGSVAFCAMQ
Trigger: TTGCATTGCGCAGAACGCTACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGCTCAGTGTGTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 90 bp TATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTaGGACTCAGGGATAGCACCTCTCACCAACGGGGTGACTTTTATT +
Preference number: 1 (lower is better)
Translates to: YLGPLYLAFHPLVLH*DSGIAPLTNGVTFI
Trigger: AATAAAAGTCACCCCGTTGGTGAGAGGTGCTATCCCTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CCA 90 bp AATCCCTTTGGTGGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTGCTCAGATGTGGCAGTGACAGTAAC +
Preference number: 1 (lower is better)
Translates to: NPFGGRAGVQFTCGG*NINVRLLRCGSDSN
Trigger: GTTACTGTCACTGCCACATCTGAGCAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACCAAAGGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR TCA 90 bp AGAGCTTCTCATAGCATTTCCCACAGTGAATGGTGTCACGGTGAATaGAGATCTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCC +
Preference number: 1 (lower is better)
Translates to: RASHSISHSEWCHGE*RSDPGDRPSVYCKS
Trigger: GGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGCTATGAGAAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR GCA 90 bp GACAAGCTAAACACTAGCCTATGCCAATCCCTAGCATTTGATGTCTaGAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCC +
Preference number: 1 (lower is better)
Translates to: DKLNTSLCQSLAFDV*NLPTRDHQQSSTWP
Trigger: GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAGCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 90 bp TCTTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTaGACCCTACACTTCTGCCCACTTAAACTCATTAGAAAGCCAATC +
Preference number: 1 (lower is better)
Translates to: SSTWPIISLKGVRTH*TLHFCPLKLIRKPI
Trigger: GATTGGCTTTCTAATGAGTTTAAGTGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 90 bp GCCAAGATGGAATTCCTGTTTGATCCTCTTTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACA +
Preference number: 1 (lower is better)
Translates to: AKMEFLFDPLWLSLK*HHGHKALSKLQEAT
Trigger: TGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATGTCATTTCAGGCTCAACCAAAGAGGATCAAACAGGAATTCCATCTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CCA 90 bp TCATGTCTAAGATGGGATGAGAATATCACCTTCACAGGATTATTATaGGGATTAATGCCATTACTCTGTGACAGTGCCTGCTATGTGGTA +
Preference number: 1 (lower is better)
Translates to: SCLRWDENITFTGLL*GLMPLLCDSACYVV
Trigger: TACCACATAGCAGGCACTGTCACAGAGTAATGGCATTAATCCCCATAATAATCCTGTGAAGGTGATATTCTCATCCCATCTTAGACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 90 bp ATAGCCACCTCTCTGAGTTCCAATATCCTCATGTCTAAGATGGGATaGGAATATCACCTTCACAGGATTATTATGGGGATTAATGCCATT +
Preference number: 1 (lower is better)
Translates to: IATSLSSNILMSKMG*EYHLHRIIMGINAI
Trigger: AATGGCATTAATCCCCATAATAATCCTGTGAAGGTGATATTCTCATCCCATCTTAGACATGAGGATATTGGAACTCAGAGAGGTGGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 90 bp ACATGCCAACATACCTGTAAGGGAACACTCAAATATAGTGAAAGGTaGGTGGAAGACCAAATGAAAAACTGCTATATAACTCAATCAAAA +
Preference number: 1 (lower is better)
Translates to: TCQHTCKGTLKYSER*VEDQMKNCYITQSK
Trigger: TTTTGATTGAGTTATATAGCAGTTTTTCATTTGGTCTTCCACTCACCTTTCACTATATTTGAGTGTTCCCTTACAGGTATGTTGGCATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPACLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNCLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPACFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKICFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPADRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CAA 90 bp CCCTTAAAGGCAGACTATACCTTGAACGGGGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTGAG +
Preference number: 2 (lower is better)
Translates to: PLKADYTLNGGSQPI*GLFTLPFIHWSCTE
Trigger: CTCAGTGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTTTAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGCLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLCLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSTPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRTPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPASLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 2 (lower is better)
Translates to: WTVSDLTVAVSTDPSSCPWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...AGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: QSMECCHMEASSPWRMSPDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CAA 90 bp CACGTGCCAAGTCTGATGTTGGGGACTACAGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACATGCCCTCCAGAGGAAATCCACTAC +
Preference number: 2 (lower is better)
Translates to: HVPSLMLGTTAEEEQ*VFSVGTCPPEEIHY
Trigger: GTAGTGGATTTCCTCTGGAGGGCATGTACCCACACTAAATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPANLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 2 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLCLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGCTGGGCCCACAGATaGCAGAGTCCAGCTGAACCT +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLCWAHR*QSPAEP
Trigger: AGGTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CAA 90 bp GTCTTGCATGTTGGTTCTAAAACTCCCTTAAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCT +
Preference number: 2 (lower is better)
Translates to: VLHVGSKTPLKADYT*NGGSQPILGLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTTTAAGGGAGTTTTAGAACCAACATGCAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPALAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGTPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GCATTTCCCACAGTGAATGGTGTCACGGTGAATGAAGATCTGATCCAGGAGATCCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 2 (lower is better)
Translates to: AFPTVNGVTVNEDLIQEILGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...GATCTCCTGGATCAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPALNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPATLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKITLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACTTCACTAGCATTCACTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: VAIACRYWLPRRHFTSIHFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...GTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AATGAAGATCTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 2 (lower is better)
Translates to: NEDLIQEIAHRFTANPTLIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...AAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQTPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLTPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: EASLSWASLPCLSSTGPAFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CAA 90 bp AGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTCTGATCATTaGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: RGNPLQINGMFLSDH*AGRTSPQANVHRAQ
Trigger: CTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCATTTATTTGTAGTGGATTTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 2 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 2 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 2 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTGCTGGGCCCACAGATaGCAGAGTCCAGCTGAACCT +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQCWAHR*QSPAEP
Trigger: AGGTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFLAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGAAGCCAGCCTATCTTaGGCCTCTTTACCTTGCCTT +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMEASLS*ASLPCL
Trigger: AAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 2 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 2 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAGTTGGTATTTAGTGTaGGTACATGCCCTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMSWYLV*VHALQR
Trigger: CCTCTGGAGGGCATGTACCCACACTAAATACCAACT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 2 (lower is better)
Translates to: VCESNLFSAESISVWRHFSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTGAGGAAGAGCAGTTaGTATTTAGTGTGGGTACAT +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLRKSS*YLVWVH
Trigger: ATGTACCCACACTAAATACCAACTGCTCTTCCTCAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 2 (lower is better)
Translates to: GERRRHFIIKSRAEALILYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: RRRHFIIKSRAEALILYQFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp TGGCAGAGTCCAGCTGAACCTGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTACATCTGCCCAGCCATC +
Preference number: 3 (lower is better)
Translates to: WQSPAEPEQRIG*LHGQAYICPAI
Trigger: GATGGCTGGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTCAGGTTCAGCTGGACTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 3 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: EASLSWASLPCLSSTGPACKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR GCA 72 bp ACGGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCTGCACTGAGACTCAGG +
Preference number: 3 (lower is better)
Translates to: TGEASLSWASLP*LSSTGPALRLR
Trigger: CCTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CCA 72 bp TATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGC +
Preference number: 3 (lower is better)
Translates to: YAFGRPEGRVLT*QELCTLCTVLG
Trigger: GCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCAGGGAAAGGGGCAGCTaGGCCCTTGAAGTACTTCAT +
Preference number: 3 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSRERGS*ALEVLH
Trigger: ATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCCT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 3 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 3 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp CTTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTGGCAGGAACTGTGTAC +
Preference number: 3 (lower is better)
Translates to: LLLFASLCLWEA*REGVNLAGTVY
Trigger: GTACACAGTTCCTGCCAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp AGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGACGTTGCTATAGCGTGC +
Preference number: 3 (lower is better)
Translates to: SAATWRLLLHGE*VLNAADVAIAC
Trigger: GCACGCTATAGCAACGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR GCA 72 bp CCAGAGGAAGAGTGTGATTTCACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: PEEECDFTPSAL*KPMPLGGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 3 (lower is better)
Translates to: EASLSWASLPCLSSTGPAVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CCA 72 bp GGTGGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTGCTCAGATGTGGCAGT +
Preference number: 3 (lower is better)
Translates to: GGRAGVQFTCGG*NINVRLLRCGS
Trigger: ACTGCCACATCTGAGCAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 3 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 3 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 3 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAGGGAAAGGGGCAGCTaGGCCCTTGAAGTACTTCAT +
Preference number: 3 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLRERGS*ALEVLH
Trigger: ATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCCT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR GCA 72 bp ACTGAGCACAAAATCAATGCTTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGCTCTGTAGCGTTCTGC +
Preference number: 3 (lower is better)
Translates to: TEHKINACFCGC*SGKSMGSVAFC
Trigger: GCAGAACGCTACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 3 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: VCESNLFSAESISVWRHFCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp GAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTaGGCACAAAATCAATGCTTGCTTTTGTGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: ELCTLCTVLGTH*AQNQCLLLWVL
Trigger: CAGCACCCACAAAAGCAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 3 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 3 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 3 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 3 (lower is better)
Translates to: EASLSWASLPCLSSTGPAHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 3 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 3 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 3 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 3 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 3 (lower is better)
Translates to: EASLSWASLPCLSSTGPAFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp CATAGCATTTCCCACAGTGAATGGTGTCACGGTGAATaGAGATCTGATCCAGGAGATCGCCCATCGGTTTAC +
Preference number: 3 (lower is better)
Translates to: HSISHSEWCHGE*RSDPGDRPSVY
Trigger: GTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR CCA 72 bp CTCAATGCTGCTGACGTTGCTATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTCACTAGCATTCACGTA +
Preference number: 3 (lower is better)
Translates to: LNAADVAIACRY*LPRRHFTSIHV
Trigger: TACGTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAGGGAAAGGGGCAGCTaGGCCCTTGAAGTACTTCAT +
Preference number: 3 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQRERGS*ALEVLH
Trigger: ATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCCT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 3 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR TCA 72 bp TGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTaGACCCTACACTTCTGCCCACTTAAACTCATTAGA +
Preference number: 3 (lower is better)
Translates to: WPIISLKGVRTH*TLHFCPLKLIR
Trigger: TCTAATGAGTTTAAGTGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 3 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: RRRHFIIKSRAEALILYQCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: VCESNLFSAESISVWRHFNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 3 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR GCA 72 bp AACACTAGCCTATGCCAATCCCTAGCATTTGATGTCTaGAATTTACCCACCAGGGATCATCAACAGTCTTCA +
Preference number: 3 (lower is better)
Translates to: NTSLCQSLAFDV*NLPTRDHQQSS
Trigger: TGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAGGGATTGGCATAGGCTAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 3 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 3 (lower is better)
Translates to: RRRHFIIKSRAEALILYQPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 3 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 3 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 3 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAGGGAAAGGGGCAGCTaGGCCCTTGAAGTACTTCAT +
Preference number: 3 (lower is better)
Translates to: RRRHFIIKSRAEALILYQRERGS*ALEVLH
Trigger: ATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCCT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp GAATTCCTGTTTGATCCTCTTTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCGCTTTCTAAGCTACAA +
Preference number: 3 (lower is better)
Translates to: EFLFDPLWLSLK*HHGHKALSKLQ
Trigger: TTGTAGCTTAGAAAGCGCTTTATGCCCATGATGTCATTTCAGGCTCAACCAAAGAGGATCAAACAGGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 3 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 3 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 3 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: GERRRHFIIKSRAEALILSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 3 (lower is better)
Translates to: GERRRHFIIKSRAEALILFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 3 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp TCTCTGAGTTCCAATATCCTCATGTCTAAGATGGGATaGGAATATCACCTTCACAGGATTATTATGGGGATT +
Preference number: 3 (lower is better)
Translates to: SLSSNILMSKMG*EYHLHRIIMGI
Trigger: AATCCCCATAATAATCCTGTGAAGGTGATATTCTCATCCCATCTTAGACATGAGGATATTGGAACTCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 3 (lower is better)
Translates to: RRRHFIIKSRAEALILYQFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 3 (lower is better)
Translates to: GERRRHFIIKSRAEALILDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR TCA 72 bp ATTAAGATACGATATTGGATGTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAAGAAATCAAACAGGGA +
Preference number: 3 (lower is better)
Translates to: IKIRYWMYATST*EGQKHEEIKQG
Trigger: TCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATACATCCAATATCGTATCTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTCCTCGGGCGACCTCTaGCGGCCGGCACGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSSSGDL*RPARAW
Trigger: CCATGCCCGTGCCGGCCGCCAGAGGTCGCCCGAGGA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454925.1
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGCGCGACTCCGGCCTaGGGGCAGCTCTATGGTGCG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGATPA*GQLYGA
Trigger: CGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGCGGAGTCCTGCCCTaGGTGTCAGGATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGGVLP*VSGSAG
Trigger: GCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR TCA 90 bp TGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTGGCGCGACTCCGGCCTaGGGGCAGCTCTATGGTGCG +
Preference number: 4 (lower is better)
Translates to: WTVSDLTVAVSTDPSSCPGATPA*GQLYGA
Trigger: CGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCC...AGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIQAGSP*LRIPHC
Trigger: GCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLLGVP*CRAAPD
Trigger: ATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRALLGR*QDVGVL
Trigger: GAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGCGGAGTCCTGCCCTaGGTGTCAGGATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGGVLP*VSGSAG
Trigger: GCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCATGCCTTCCACGTCTaGGGCCACCAGGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNHAFHV*GHQAES
Trigger: GGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTCCAGTTGTCCTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCCCAGCCAAGTCCCTCTaGAGCTCTCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPVVLSEYGVLPHGGFFSPAKSL*SSLEQG
Trigger: CCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG...GGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGC +
Preference number: 4 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQQAGSP*LRIPHC
Trigger: GCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTG...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGCAGAGGCTTCCCTTTaGTGCGGCCTCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRAEASL*CGLQEL
Trigger: CAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRCLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSRDSRD*SGTGAS
Trigger: GGAAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGCGCGACTCCGGCCTaGGGGCAGCTCTATGGTGCG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGATPA*GQLYGA
Trigger: CGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTGCCTGGGGAAGACCTaGGCTCCTGGCTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LAFTYSFTKRIPLVVELECLGKT*APGSQR
Trigger: CCGCTGGGAGCCAGGAGCTCAGGTCTTCCCCAGGCA...CTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTGCCTGGGGAAGACCTaGGCTCCTGGCTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGCLGKT*APGSQR
Trigger: CCGCTGGGAGCCAGGAGCTCAGGTCTTCCCCAGGCA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGCCTTGGGGAACTGCTaGTGGGGCTGGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTALGNC*WGWEEL
Trigger: CAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTGCCTTGGGGAACTGCTaGTGGGGCTGGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QSMECCHMEASSPWRMSPALGNC*WGWEEL
Trigger: CAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGC...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTGCCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRCQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGCA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324823.10
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGAGCCAAGGCCCCCTTTaGGTCTGCCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRSQGPL*VCLCIL
Trigger: GAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCCCTCTGGAGCTCTCTaGAGCAGGGGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNPSGAL*SRGPPC
Trigger: ACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACCCTCTGGAGCTCTCTaGAGCAGGGGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAPSGAL*SRGPPC
Trigger: ACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACCAGCCAAGTCCCTCTaGAGCTCTCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAPAKSL*SSLEQG
Trigger: CCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCCAGCCAAGTCCCTCTaGAGCTCTCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTPAKSL*SSLEQG
Trigger: CCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLQAGSP*LRIPHC
Trigger: GCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGCGCTCCTCCTCGCCTaGTGGCAGAGGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIALLLA*WQRLPF
Trigger: AAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGACCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSDQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGACCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRDQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGTGCCTGTGTCTCCTaGGTAGGACCAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGACVS*VGPVLF
Trigger: GAAGAGCACTGGTCCTACCCAGGAGACACAGGCACC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGAGCTGATGGCTGCTaGTCTAGGCTTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGADGC*SRLAGL
Trigger: CAGTCCTGCAAGCCTAGACCAGCAGCCATCAGCTCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLLGVP*CRAAPD
Trigger: ATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCACCGCTTGCAGCCTCTaGCCTCCGTTTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSTACSL*PPFLFI
Trigger: GATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTCCCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: AFTYSFTKRIPLVVELESLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGCGGCCTCCAAGAGCTaGGATACTCATGGTGATTGC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRAASKS*DTHGDC
Trigger: GCAATCACCATGAGTATCTCAGCTCTTGGAGGCCGC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTCCATCCGCACTGTTTaGGCCAGGAGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRSIRTV*ARSGSC
Trigger: GCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCTTCGCGATAAACGGTaGCTGTGTCTCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLRDKR*LCLLGR
Trigger: CCTACCCAGGAGACACAGGCACCGTTTATCGCGAAG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGCCAGGAGTGGATCTTaGCAGAGCAGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTARSGS*QSRWVL
Trigger: CAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGCCAGGAGTGGATCTTaGCAGAGCAGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIARSGS*QSRWVL
Trigger: CAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRGLLCC*SSYQQG
Trigger: TCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCCTCCTGGGCTGCTGTaGTGTTGCTCTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSPPGLL*CCSSYQ
Trigger: CTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCAGTTGTCCTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PVVLSEYGVLPHGGFFSMGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...CATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGAGACGCTTTGGTCCTaGCTCCATCCGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSETLWS*LHPHCL
Trigger: CAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTGGGGAAGACCTCATaGCTTCCACGTCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLGKTS*LPRLGP
Trigger: TGGCCCCAGACGTGGAAGGCATGAGGTCTTCCCCAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTGGGGAAGACCTCATaGCTTCCACGTCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPALGKTS*LPRLGP
Trigger: TGGCCCCAGACGTGGAAGGCATGAGGTCTTCCCCAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRSCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTQAGSP*LRIPHC
Trigger: GCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGCAGAGGCTTCCCTTTaGTGCGGCCTCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNAEASL*CGLQEL
Trigger: CAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGCTGGCGCTCCTCCTCGCCTaGTGGCAGAGGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GRAGVQFTCGGWNINVRLALLLA*WQRLPF
Trigger: AAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGC...CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGACTGGCAGCACTTTTTaGAGTCCCGTTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRTGSTF*SPVGLG
Trigger: CCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCTTGAGCTGAGCTCCTaGCTCCCAGCGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLELSS*LPAGLG
Trigger: GCCTAGCCCCGCTGGGAGCCAGGAGCTCAGCTCAAG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR TCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQLLGVP*CRAAPD
Trigger: ATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAG...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp GTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCAATGCTGCTGACCGCTTGCAGCCTCTaGCCTCCGTTTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: VLPHGGFFSMANESSMLLTACSL*PPFLFI
Trigger: GATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGT...CAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQALLGR*QDVGVL
Trigger: GAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGC...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKICLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPARDSRD*SGTGAS
Trigger: GGAAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTRDSRD*SGTGAS
Trigger: GGAAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTAGGCTTGCAGGACTaGGAGTTGGCACTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLGLQD*ELALCP
Trigger: TGGGCACAGTGCCAACTCTCAGTCCTGCAAGCCTAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTAGGCTTGCAGGACTaGGAGTTGGCACTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPALGLQD*ELALCP
Trigger: TGGGCACAGTGCCAACTCTCAGTCCTGCAAGCCTAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTGGGTGTCAGGATCTaGAGGCGGACAATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLGVRI*RRTISS
Trigger: TGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp CCTCCAGTTGTCCTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PPVVLSEYGVLPHGGFFSGLLCC*SSYQQG
Trigger: TCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCC...GGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGAGGCTTCCCTTTGGTaGGGCCTCCAAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTEASLW*GLQELR
Trigger: TCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGCACTCGATCCAAATTaGCCGAGACGCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSALDPN*PRRFGP
Trigger: AGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCCTCCTTGTCTTTGTTaGCTGGGGAAGACCTCATGC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRPPCLC*LGKTSC
Trigger: GCATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGCCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTCQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324823.10
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGAGCCAAGGCCCCCTTTaGGTCTGCCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LSEYGVLPHGGFFSMANESQGPL*VCLCIL
Trigger: GAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCT...CTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCAGCCAAGGCCCCCTTTaGGTCTGCCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKISQGPL*VCLCIL
Trigger: GAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTGTCCTCTCAGAGTATaGAGTGCTGCCACATGGAGG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRCPLRV*SAATWR
Trigger: CCTCCATGTGGCAGCACTCCATACTCTGAGAGGACA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGCTGGGCCCACAGATaGCAGAGTCCAGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTCWAHR*QSPAEP
Trigger: AGGTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGCTGGGCCCACAGATaGCAGAGTCCAGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPACWAHR*QSPAEP
Trigger: AGGTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGACCAGGAGCTGCCTaGGAGCCTTTCCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGPGAA*EPFLFA
Trigger: AGCAAAGAGGAAAGGCTCCCAGGCAGCTCCTGGTCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCCCTCTGGAGCTCTCTaGAGCAGGGGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGPSGAL*SRGPPC
Trigger: ACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCCCTCTGGAGCTCTCTaGAGCAGGGGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLPSGAL*SRGPPC
Trigger: ACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GCAGATACTGGCTTCCCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGCCCTCTGGAGCTCTCTaGAGCAGGGGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ADTGFPEDTSLAFTYSFTPSGAL*SRGPPC
Trigger: ACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGG...CGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCAGCAGAGACTGAAGTaGCACTGGAGCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRQQRLK*HWSFLS
Trigger: AGAGAGGAAGCTCCAGTGCCACTTCAGTCTCTGCTG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGCGCTCCTCCTCGCCTaGTGGCAGAGGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLALLLA*WQRLPF
Trigger: AAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCTGATGAAAAGGATGTaGCGCGACTCCGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNLMKRM*RDSGLR
Trigger: CCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAACTGCTGCTGGGGCTaGGAAGAGCTGTCTATGGGC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPANCCWG*EELSMG
Trigger: GCCCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTTTTTGGAGTCCCGTTaGCCTTGGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSFLESR*PWGTAA
Trigger: AGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGACCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNDQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGACCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPADQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGGTGCCTGTGTCTCCTaGGTAGGACCAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTGACVS*VGPVLF
Trigger: GAAGAGCACTGGTCCTACCCAGGAGACACAGGCACC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGGGCTAGGCATACTTaGCAGGCACTCGATCCAAAT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGARHT*QALDPN
Trigger: ATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACTTCACTAGCATTCACGAAGACCTGAGCTCCTaGCTCCCAGCGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VAIACRYWLPRRHFTSIHEDLSS*LPAGLG
Trigger: GCCTAGCCCCGCTGGGAGCCAGGAGCTCAGGTCTTC...GTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGAAGACCTGAGCTCCTaGCTCCCAGCGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTEDLSS*LPAGLG
Trigger: GCCTAGCCCCGCTGGGAGCCAGGAGCTCAGGTCTTC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539731.5
3UTR CAA 72 bp AACGGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: NGGSQPILGLFT*PFIHWSCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCACCGCTTGCAGCCTCTaGCCTCCGTTTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKITACSL*PPFLFI
Trigger: GATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAACCGCTTGCAGCCTCTaGCCTCCGTTTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPATACSL*PPFLFI
Trigger: GATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAGGCAGACTATACCTTaGACGGGGGAAGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNRQTIP*TGEASL
Trigger: TAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAGGCAGACTATACCTTaGACGGGGGAAGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPARQTIP*TGEASL
Trigger: TAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTCCATCCGCACTGTTTaGGCCAGGAGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKISIRTV*ARSGSC
Trigger: GCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCCTCACCTCTTGAGCTaGGCTCCTGGCTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPPHLLS*APGSQR
Trigger: CCGCTGGGAGCCAGGAGCTCAGCTCAAGAGGTGAGG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCTTCGCGATAAACGGTaGCTGTGTCTCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNLRDKR*LCLLGR
Trigger: CCTACCCAGGAGACACAGGCACCGTTTATCGCGAAG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTTCGCGATAAACGGTaGCTGTGTCTCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLRDKR*LCLLGR
Trigger: CCTACCCAGGAGACACAGGCACCGTTTATCGCGAAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTTCGCGATAAACGGTaGCTGTGTCTCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPALRDKR*LCLLGR
Trigger: CCTACCCAGGAGACACAGGCACCGTTTATCGCGAAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGCCAGGAGTGGATCTTaGCAGAGCAGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLARSGS*QSRWVL
Trigger: CAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACACCAGGCGGAGTCCTaGCCTGGGTGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTHQAES*PGCQDL
Trigger: CAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTGLLCC*SSYQQG
Trigger: TCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACCTCCTGGGCTGCTGTaGTGTTGCTCTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAPPGLL*CCSSYQ
Trigger: CTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AATCTTTGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NLWTVSDLTVAVSTDPSSGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...ACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCAAAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRSQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSSQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAGGGCAGCTCTATGGTaGGACCCTCCGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTRAALW*DPPIHP
Trigger: AGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGAGACGCTTTGGTCCTaGCTCCATCCGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAETLWS*LHPHCL
Trigger: CAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGAGACGCTTTGGTCCTaGCTCCATCCGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIETLWS*LHPHCL
Trigger: CAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCAGGTAAGGTCCCAGTaGAGTTTGGCTCGTACCTGC +
Preference number: 4 (lower is better)
Translates to: QSMECCHMEASSPWRMSPQVRSQ*SLARTC
Trigger: GCAGGTACGAGCCAAACTGCACTGGGACCTTACCTG...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGTGCCTGTGTCTCCTaGGTAGGACTGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGACVS*VGLPVL
Trigger: GAGCACTGGCAGTCCTACCCAGGAGACACAGGCACC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324823.10
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTSCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGGCGGAGTCCTGCCCTaGGTGTCAGGATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPGGVLP*VSGSAG
Trigger: GCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCATGCCTTCCACGTCTaGGGCCACCAGGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPHAFHV*GHQAES
Trigger: GGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACCCTCTGGAGCTCTCTaGAGCAGGGGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTPSGAL*SRGPPC
Trigger: ACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGTGGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGCTGATGAAAAGGATGTaGCGCGACTCCGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGRAGVQFTCGGWNINVRLMKRM*RDSGLR
Trigger: CCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAG...CCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp GCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTCCAACTGCTGCTGGGGCTaGGAAGAGCTGTCTATGGGC +
Preference number: 4 (lower is better)
Translates to: AFTYSFTKRIPLVVELESNCCWG*EELSMG
Trigger: GCCCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTT...GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTGACCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: WTVSDLTVAVSTDPSSCPDQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTC...AGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTTGAGCTGAGCTCCTaGCTCCCAGCGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLELSS*LPAGLG
Trigger: GCCTAGCCCCGCTGGGAGCCAGGAGCTCAGCTCAAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTTGTCTTTGTTGCCTaGGGAAGACCTCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLVFVA*GRPHAF
Trigger: GAAGGCATGAGGTCTTCCCCAGGCAACAAAGACAAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGGGTCCCAGTGCAGTTTaGCTCGTACCTGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQGPSAV*LVPAGA
Trigger: TGCACCAGCAGGTACGAGCCAAACTGCACTGGGACC...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
3UTR CAA 72 bp GCAGACTATACCTTGAACGGGGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: ADYTLNGGSQPI*GLFTLPFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLLGVP*CRAAPD
Trigger: ATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTPFLFI*GEWHHL
Trigger: GAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCAGTTGTCCTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: PVVLSEYGVLPHGGFFSMPFLFI*GEWHHL
Trigger: GAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGG...CATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTALLGR*QDVGVL
Trigger: GAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPALLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSTQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRTQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCTGAGATACTCATGGTaGTTGCTCCGCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNLRYSW*LLRSSP
Trigger: AGGAGAGCTGCGGAGCAATCACCATGAGTATCTCAG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTGAGATACTCATGGTaGTTGCTCCGCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPALRYSW*LLRSSP
Trigger: AGGAGAGCTGCGGAGCAATCACCATGAGTATCTCAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTCCTCCATCCGCACTGTTTaGGCCAGGAGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: AFTYSFTKRIPLVVELESSIRTV*ARSGSC
Trigger: GCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGA...GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp CTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGCTAGGCTTGCAGGACTaGGAGTTGGCACTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LAFTYSFTKRIPLVVELELGLQD*ELALCP
Trigger: TGGGCACAGTGCCAACTCTCAGTCCTGCAAGCCTAG...CTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp CTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCAATGCTGCTGACGGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LPHGGFFSMANESSMLLTDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...CGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTTCCATGTGTCTACCTaGAGGCTCCCTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGFHVST*RLPPAS
Trigger: GGAGGCAGGAGGGAGCCTGCAGGTAGACACATGGAA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTCCAGGGCAGCTCTATGGTaGGACCCTCCGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: AFTYSFTKRIPLVVELESRAALW*DPPIHP
Trigger: AGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCT...GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp CTCAATGCTGCTGACGTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACACTGGAGCTGATGGCTaGTGGTCTAGGCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNAADVAIACRYWLPRRHTGADG*WSRLAG
Trigger: TCCTGCAAGCCTAGACCAGCAGCCATCAGCTCCAGT...GTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGTGCCTGTGTCTCCTaGGTAGGACTGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGACVS*VGLPVL
Trigger: GAGCACTGGCAGTCCTACCCAGGAGACACAGGCACC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324823.10
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKICLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QSMECCHMEASSPWRMSPCLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPACLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGTCCTCTCAGAGTATaGAGTGCTGCCACATGGAGG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPACPLRV*SAATWR
Trigger: CCTCCATGTGGCAGCACTCCATACTCTGAGAGGACA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGGGAAAGGGGCAGCTTaGCCCTTGAAGTACTTCATG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIGKGAA*PLKYFM
Trigger: CATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCCAGCCAAGTCCCTCTaGAGCTCTCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPPAKSL*SSLEQG
Trigger: CCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNQAGSP*LRIPHC
Trigger: GCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCAGCAGAGACTGAAGTaGCACTGGAGCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIQQRLK*HWSFLS
Trigger: AGAGAGGAAGCTCCAGTGCCACTTCAGTCTCTGCTG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCAGCAGAGACTGAAGTaGCACTGGAGCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNQQRLK*HWSFLS
Trigger: AGAGAGGAAGCTCCAGTGCCACTTCAGTCTCTGCTG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGTCCCCCTTCAGCGTaGTTCGCACTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPACPPSA*FALSSA
Trigger: AGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCTGATGAAAAGGATGTaGCGCGACTCCGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLMKRM*RDSGLR
Trigger: CCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTTTTGGAGTCCCGTTaGCCTTGGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIFLESR*PWGTAA
Trigger: AGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTTTTGGAGTCCCGTTaGCCTTGGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTFLESR*PWGTAA
Trigger: AGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTTTTTGGAGTCCCGTTaGCCTTGGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNFLESR*PWGTAA
Trigger: AGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGTGCCTGTGTCTCCTaGGTAGGACCAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGACVS*VGPVLF
Trigger: GAAGAGCACTGGTCCTACCCAGGAGACACAGGCACC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGGGCTAGGCATACTTaGCAGGCACTCGATCCAAAT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGARHT*QALDPN
Trigger: ATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGGGAGCTGATGGCTGCTaGTCTAGGCTTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LAFTYSFTKRIPLVVELEGADGC*SRLAGL
Trigger: CAGTCCTGCAAGCCTAGACCAGCAGCCATCAGCTCC...CTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCGGCCGGCACGGGCATaGCCTCAAGAGAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFRPARA*PQENPR
Trigger: GCGGGGATTCTCTTGAGGCCATGCCCGTGCCGGCCG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454925.1
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPALLGR*QDVGVL
Trigger: GAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTCCCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: AFTYSFTKRIPLVVELESLLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTCLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAGGCAGACTATACCTTaGACGGGGGAAGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLRQTIP*TGEASL
Trigger: TAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGGCAGACTATACCTTaGACGGGGGAAGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGRQTIP*TGEASL
Trigger: TAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGCGGCCTCCAAGAGCTaGGATACTCATGGTGATTGC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGAASKS*DTHGDC
Trigger: GCAATCACCATGAGTATCTCAGCTCTTGGAGGCCGC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTCCATCCGCACTGTTTaGGCCAGGAGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGSIRTV*ARSGSC
Trigger: GCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCCTCACCTCTTGAGCTaGGCTCCTGGCTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFPHLLS*APGSQR
Trigger: CCGCTGGGAGCCAGGAGCTCAGCTCAAGAGGTGAGG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCCTCACCTCTTGAGCTaGGCTCCTGGCTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNPHLLS*APGSQR
Trigger: CCGCTGGGAGCCAGGAGCTCAGCTCAAGAGGTGAGG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp GAGCTTCTCATAGCATTTCCCACAGTGAATGGTGTCACGGTGAATGAAGATCTGGCCAGGAGTGGATCTTaGCAGAGCAGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ELLIAFPTVNGVTVNEDLARSGS*QSRWVL
Trigger: CAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGC...CAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGCTATGAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCCTCCTGGGCTGCTGTaGTGTTGCTCTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGPPGLL*CCSSYQ
Trigger: CTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGAGTATGGAGCCTCCTGGGCTGCTGTaGTGTTGCTCTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: SHGCSKYRSLQLSSQSMEPPGLL*CCSSYQ
Trigger: CTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGG...CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSEYGVLPHGGFFSMANESQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...CTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTSQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPASQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPARGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCCTGATATTGTAGGGTaGCAGCTTCTTGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRPDIVG*QLLVIL
Trigger: GAGGATTACAAGAAGCTGGCACCCTACAATATCAGG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCCTGATATTGTAGGGTaGCAGCTTCTTGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSPDIVG*QLLVIL
Trigger: GAGGATTACAAGAAGCTGGCACCCTACAATATCAGG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: WTVSDLTVAVSTDPSSCPLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...AGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGATACTCATGGTGATTaGTCCGCAGCTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTDTHGD*SAALLS
Trigger: TGAGAGGAGAGCTGCGGAGCAATCACCATGAGTATC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGAGGCTTCCCTTTGGTaGGGCCTCCAAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTEASLW*GLQELR
Trigger: TCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAPSDSS*LVIQLL
Trigger: CAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTPSDSS*LVIQLL
Trigger: CAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGAGACGCTTTGGTCCTaGCTCCATCCGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLETLWS*LHPHCL
Trigger: CAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGGCACTCGATCCAAATTaGCCGAGACGCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQALDPN*PRRFGP
Trigger: AGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGC...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLSCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGGCGGAGTCCTGCCCTaGGTGTCAGGATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHGGVLP*VSGSAG
Trigger: GCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCATGCCTTCCACGTCTaGGGCCACCAGGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHHAFHV*GHQAES
Trigger: GGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: QSMECCHMEASSPWRMSPEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGGCCACACAGCCCAGTaGACACATGAGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPGHTAQ*THERWT
Trigger: GGTCCACCTCTCATGTGTCCACTGGGCTGTGTGGCC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTCTTGTAATCCTCAGTaGTCATCTTGTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRSCNPQ*SSCSQR
Trigger: CCTCTGGCTACAAGATGACCACTGAGGATTACAAGA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTCTTGTAATCCTCAGTaGTCATCTTGTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSSCNPQ*SSCSQR
Trigger: CCTCTGGCTACAAGATGACCACTGAGGATTACAAGA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGTGCCTGTGTCTCCTaGGTAGGACTGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGACVS*VGLLRF
Trigger: GAAACGGAGCAGTCCTACCCAGGAGACACAGGCACC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCCAGCCAAGTCCCTCTaGAGCTCTCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQPAKSL*SSLEQG
Trigger: CCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCCAGCCAAGTCCCTCTaGAGCTCTCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLPAKSL*SSLEQG
Trigger: CCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGACTGAAGTGGCACTaGAGCTTCCTCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGRLKWH*SFLSRS
Trigger: GCTCCGAGAGAGGAAGCTCCAGTGCCACTTCAGTCT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAGACTGAAGTGGCACTaGAGCTTCCTCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLRLKWH*SFLSRS
Trigger: GCTCCGAGAGAGGAAGCTCCAGTGCCACTTCAGTCT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp CTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTAAAGCAATAGCAGAGGCTTCCCTTTaGTGCGGCCTCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LIQEIAHRFTANPTLKAIAEASL*CGLQEL
Trigger: CAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGC...TATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGCGCTCCTCCTCGCCTaGTGGCAGAGGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLALLLA*WQRLPF
Trigger: AAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGTGTCCCCCTTCAGCGTaGTTCGCACTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQCPPSA*FALSSA
Trigger: AGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACA...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCTGAGGGCAGCTCTATaGTGCGACCCTCCGATTCAT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLRAAL*CDPPIH
Trigger: ATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAACTGCTGCTGGGGCTaGGAAGAGCTGTCTATGGGC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTNCCWG*EELSMG
Trigger: GCCCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCTTGTCTTTGTTGCCTaGGGAAGACCTCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILVFVA*GRPHAF
Trigger: GAAGGCATGAGGTCTTCCCCAGGCAACAAAGACAAG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGPFLFI*GEWHHL
Trigger: GAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPANAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGCCTTTGGGAGGCCTaGAGGGAGGGTGTTAACCTG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPCLWEA*REGVNL
Trigger: CAGGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPARKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPALSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAGGCAGACTATACCTTaGACGGGGGAAGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTRQTIP*TGEASL
Trigger: TAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTTTGCTTTTGGCCCTaGCAGACACCCGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLCFWP*QTPGTA
Trigger: CGCAGTTCCGGGTGTCTGTCAGGGCCAAAAGCAAAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPATQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGCGGCCTCCAAGAGCTaGGATACTCATGGTGATTGC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTAASKS*DTHGDC
Trigger: GCAATCACCATGAGTATCTCAGCTCTTGGAGGCCGC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGCACTTTCATCTGCTTaGGAACGTTATTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTALSSA*ERYCAP
Trigger: AGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTGCACTTTCATCTGCTTaGGAACGTTATTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSMECCHMEASSPWRMSPALSSA*ERYCAP
Trigger: AGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGC...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGGCGCGACTCCGGCCTaGGGGCAGCTCTATGGTGCG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMGATPA*GQLYGA
Trigger: CGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAATTTCCTCACCTCTTaGGCTGAGCTCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTNFLTS*AELLAP
Trigger: GGGAGCCAGGAGCTCAGCTCAAGAGGTGAGGAAATT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR TCA 90 bp AATCTTTGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: NLWTVSDLTVAVSTDPSSRDSRD*SGTGAD
Trigger: ATCAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...ACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCAAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGCCAGGAGTGGATCTTaGCAGAGCAGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQARSGS*QSRWVL
Trigger: CAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCTGGGTGTCAGGATCTaGAGGCGGACAATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGLGVRI*RRTISS
Trigger: TGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGGCACTGGAGCTCATaGCTTCCACGTCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLWHWSS*LPRLGP
Trigger: TGGCCCCAGACGTGGAAGGCATGAGCTCCAGTGCCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGLLCC*SSYQQG
Trigger: TCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACCTCCTGGGCTGCTGTaGTGTTGCTCTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTPPGLL*CCSSYQ
Trigger: CTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPATPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKITPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQGADVY*SQAFRP
Trigger: CGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AATGAAGATCTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTGAGGCTTCCCTTTGGTaGGGCCTCCAAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NEDLIQEIAHRFTANPTLEASLW*GLQELR
Trigger: TCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTC...AAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp GGTGGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGCCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GGRAGVQFTCGGWNINVRPSDSS*LVIQLL
Trigger: CAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGG...CCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAGGGCAGCTCTATGGTaGGACCCTCCGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTRAALW*DPPIHP
Trigger: AGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGCCTTGGGGAACTGCTaGTGGGGCTGGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHALGNC*WGWEEL
Trigger: CAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAACTGGAGCTGATGGCTaGTGGTCTAGGCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTTGADG*WSRLAG
Trigger: TCCTGCAAGCCTAGACCAGCAGCCATCAGCTCCAGT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GCATTTCCCACAGTGAATGGTGTCACGGTGAATGAAGATCTGATCCAGGAGATCAGTTTGGCTCGTACCTaGTGGTGCAGCTCTCTCGTC +
Preference number: 4 (lower is better)
Translates to: AFPTVNGVTVNEDLIQEISLART*WCSSLV
Trigger: GACGAGAGAGCTGCACCAGCAGGTACGAGCCAAACT...GATCTCCTGGATCAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLCLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AATGAAGATCTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: NEDLIQEIAHRFTANPTLAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...AAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCAGCCAAGGCCCCCTTTaGGTCTGCCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPSQGPL*VCLCIL
Trigger: GAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AATCTTTGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: NLWTVSDLTVAVSTDPSSWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...ACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCAAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGTCCTCTCAGAGTATaGAGTGCTGCCACATGGAGG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLCPLRV*SAATWR
Trigger: CCTCCATGTGGCAGCACTCCATACTCTGAGAGGACA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKINLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTGAGGAAGAGCAGTTaGTATTTAGTGTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLRKSS*YLVWVH
Trigger: ATGTACCCACACTAAATACCAACTGCTCTTCCTCAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCTGAGGAAGAGCAGTTaGTATTTAGTGTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLRKSS*YLVWVH
Trigger: ATGTACCCACACTAAATACCAACTGCTCTTCCTCAG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCCAGCCAAGTCCCTCTaGAGCTCTCTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFPAKSL*SSLEQG
Trigger: CCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAGACTGAAGTGGCACTaGAGCTTCCTCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTRLKWH*SFLSRS
Trigger: GCTCCGAGAGAGGAAGCTCCAGTGCCACTTCAGTCT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGCAGAGGCTTCCCTTTaGTGCGGCCTCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLAEASL*CGLQEL
Trigger: CAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTGATGAAAAGGATGTaGCGCGACTCCGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLMKRM*RDSGLR
Trigger: CCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGGTGCCTGTGTCTCCTaGGTAGGACCAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLGACVS*VGPVLF
Trigger: GAAGAGCACTGGTCCTACCCAGGAGACACAGGCACC...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGAGTATGGAGGGGGCTAGGCATACTTaGCAGGCACTCGATCCAAAT +
Preference number: 4 (lower is better)
Translates to: SHGCSKYRSLQLSSQSMEGARHT*QALDPN
Trigger: ATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCC...CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp AATCTTTGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTGCACTGTGCCCATCCTaGTCTTCCAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NLWTVSDLTVAVSTDPSSALCPS*SSRKEA
Trigger: TGCCTCTTTCCTGGAAGACCAGGATGGGCACAGTGC...ACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCAAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGAGTATGGAGCTTGTCTTTGTTGCCTaGGGAAGACCTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SHGCSKYRSLQLSSQSMELVFVA*GRPELL
Trigger: CAGGAGCTCAGGTCTTCCCCAGGCAACAAAGACAAG...CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLLGVP*CRAAPD
Trigger: ATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCACCGCTTGCAGCCTCTaGCCTCCGTTTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPTACSL*PPFLFI
Trigger: GATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CTCAATGCTGCTGACGTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LNAADVAIACRYWLPRRHWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...GTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPARRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACTGAGATACTCATGGTaGTTGCTCCGCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLRYSW*LLRSSP
Trigger: AGGAGAGCTGCGGAGCAATCACCATGAGTATCTCAG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCGGCCTCCAAGAGCTaGGATACTCATGGTGATTGC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPAASKS*DTHGDC
Trigger: GCAATCACCATGAGTATCTCAGCTCTTGGAGGCCGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGGCGCGACTCCGGCCTaGGGGCAGCTCTATGGTGCG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQGATPA*GQLYGA
Trigger: CGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGCCAGGAGTGGATCTTaGCAGAGCAGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNARSGS*QSRWVL
Trigger: CAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGCTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCACTCATTCATTGAGTaGCTGTGTGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNHSFIE*LCVSVH
Trigger: GTGGACACTAACACACAGGCACTCAATGAATGAGTG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCACTCATTCATTGAGTaGCTGTGTGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTHSFIE*LCVSVH
Trigger: GTGGACACTAACACACAGGCACTCAATGAATGAGTG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACCTGATATTGTAGGGTaGCAGCTTCTTGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAPDIVG*QLLVIL
Trigger: GAGGATTACAAGAAGCTGGCACCCTACAATATCAGG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGATACTCATGGTGATTaGTCCGCAGCTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGDTHGD*SAALLS
Trigger: TGAGAGGAGAGCTGCGGAGCAATCACCATGAGTATC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGAGGCTTCCCTTTGGTaGGGCCTCCAAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQEASLW*GLQELR
Trigger: TCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGC +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTVRTFI*LRTLLR
Trigger: GCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAAC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCAGTTGTCCTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGC +
Preference number: 4 (lower is better)
Translates to: PVVLSEYGVLPHGGFFSMVRTFI*LRTLLR
Trigger: GCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAAC...CATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCAGGGCAGCTCTATGGTaGGACCCTCCGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPRAALW*DPPIHP
Trigger: AGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTAAAGCAATAGAGACGCTTTGGTCCTaGCTCCATCCGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: LIQEIAHRFTANPTLKAIETLWS*LHPHCL
Trigger: CAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTC...TATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCTGGGGAAGACCTCATaGCTTCCACGTCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLGKTS*LPRLGP
Trigger: TGGCCCCAGACGTGGAAGGCATGAGGTCTTCCCCAG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACCTCCTTGTCTTTGTTaGCTGGGGAAGACCTCATGC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTPPCLC*LGKTSC
Trigger: GCATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTAAAGCAATATCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LIQEIAHRFTANPTLKAISCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...TATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAGACTGAAGTGGCACTaGAGCTCATGCCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTRLKWH*SSCLPR
Trigger: ACGTGGAAGGCATGAGCTCCAGTGCCACTTCAGTCT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGCTGATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: GRAGVQFTCGGWNINVRLIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCAATGCTTGCTTTTGTaGGTGCTGCTCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGQCLLL*VLLWEE
Trigger: CTCTTCCCAGAGCAGCACCCACAAAAGCAAGCATTG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGCTGGGCCCACAGATaGCAGAGTCCAGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQCWAHR*QSPAEP
Trigger: AGGTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGLPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGAAGCCAGCCTATCTTaGGCCTCTTTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLEASLS*ASLPCL
Trigger: AAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTCTTGTAATCCTCAGTaGTCATCTTGTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKISCNPQ*SSCSQR
Trigger: CCTCTGGCTACAAGATGACCACTGAGGATTACAAGA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATCTTGTAATCCTCAGTaGTCATCTTGTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPASCNPQ*SSCSQR
Trigger: CCTCTGGCTACAAGATGACCACTGAGGATTACAAGA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILQAGSP*LRIPHC
Trigger: GCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMQAGSP*LRIPHC
Trigger: GCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGCAGAGGCTTCCCTTTaGTGCGGCCTCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFAEASL*CGLQEL
Trigger: CAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATGTCCCCCTTCAGCGTaGTTCGCACTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTCPPSA*FALSSA
Trigger: AGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGCTGAGGGCAGCTCTATaGTGCGACCCTCCGATTCAT +
Preference number: 4 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLLRAAL*CDPPIH
Trigger: ATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAG...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAACTGCTGCTGGGGCTaGGAAGAGCTGTCTATGGGC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLNCCWG*EELSMG
Trigger: GCCCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGACTGGCAGCACTTTTTaGAGTCCCGTTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLTGSTF*SPVGLG
Trigger: CCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGT...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGAGTATGGAGCTGTTCTCACCAGACTaGCAGCACTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SHGCSKYRSLQLSSQSMELFSPD*QHFLES
Trigger: GGACTCCAAAAAGTGCTGCCAGTCTGGTGAGAACAG...CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCACTGTGCCCATCCTaGTCTTCCAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPALCPS*SSRKEA
Trigger: TGCCTCTTTCCTGGAAGACCAGGATGGGCACAGTGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
3UTR CAA 72 bp AGTCTGATGTTGGGGACTACAGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACATGCCCTCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLMLGTTAEEEQ*VFSVGTCPPEE
Trigger: TTCCTCTGGAGGGCATGTACCCACACTAAATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAACATCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPPFLFI*GEWHHL
Trigger: GAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGACCGCTTGCAGCCTCTaGCCTCCGTTTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQTACSL*PPFLFI
Trigger: GATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAGGCAGACTATACCTTaGACGGGGGAAGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQRQTIP*TGEASL
Trigger: TAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNRDSRD*SGTGAS
Trigger: GGAAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGCACTTTCATCTGCTTaGGAACGTTATTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGALSSA*ERYCAP
Trigger: AGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQRDSRD*SGTGAD
Trigger: ATCAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQGLLCC*SSYQQG
Trigger: TCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACACAGACACCCGGAACTaGGCCACTCAGAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHTDTRN*ATQSSC
Trigger: ACAGCTGCTCTGAGTGGCGCAGTTCCGGGTGTCTGT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR GCA 90 bp TGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCCTGATATTGTAGGGTaGCAGCTTCTTGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: WTVSDLTVAVSTDPSSCPPDIVG*QLLVIL
Trigger: GAGGATTACAAGAAGCTGGCACCCTACAATATCAGG...AGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTPSDSS*LVIQLL
Trigger: CAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQSCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAGCCAAGGCCCCCTTTaGGTCTGCCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFSQGPL*VCLCIL
Trigger: GAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LAFTYSFTKRIPLVVELEFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...CTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGTCCTCTCAGAGTATaGAGTGCTGCCACATGGAGG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPCPLRV*SAATWR
Trigger: CCTCCATGTGGCAGCACTCCATACTCTGAGAGGACA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTAAAGCAATATGTCCTCTCAGAGTATaGAGTGCTGCCACATGGAGG +
Preference number: 4 (lower is better)
Translates to: LIQEIAHRFTANPTLKAICPLRV*SAATWR
Trigger: CCTCCATGTGGCAGCACTCCATACTCTGAGAGGACA...TATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTTGTGGGTGCTGCTCTaGGAAGAGCATGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLLWVLL*EEHGLC
Trigger: ACAGAGCCCATGCTCTTCCCAGAGCAGCACCCACAA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTGCTGGGCCCACAGATaGCAGAGTCCAGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHCWAHR*QSPAEP
Trigger: AGGTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGCTGGGCCCACAGATaGCAGAGTCCAGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNCWAHR*QSPAEP
Trigger: AGGTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCTGAGGAAGAGCAGTTaGTATTTAGTGTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNLRKSS*YLVWVH
Trigger: ATGTACCCACACTAAATACCAACTGCTCTTCCTCAG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTGGACACATGAGAGGTaGACCAGGAGCTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHWTHER*TRSCLG
Trigger: TCCCAGGCAGCTCCTGGTCCACCTCTCATGTGTCCA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR CCA 90 bp GGTGGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGTCTTGTAATCCTCAGTaGTCATCTTGTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GGRAGVQFTCGGWNINVRSCNPQ*SSCSQR
Trigger: CCTCTGGCTACAAGATGACCACTGAGGATTACAAGA...CCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGTCCCCCTTCAGCGTaGTTCGCACTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPCPPSA*FALSSA
Trigger: AGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCTGAGGGCAGCTCTATaGTGCGACCCTCCGATTCAT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLRAAL*CDPPIH
Trigger: ATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTGATGAAAAGGATGTaGCGCGACTCCGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLMKRM*RDSGLR
Trigger: CCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACAACTGCTGCTGGGGCTaGGAAGAGCTGTCTATGGGC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHNCCWG*EELSMG
Trigger: GCCCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAACTGCTGCTGGGGCTaGGAAGAGCTGTCTATGGGC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNNCCWG*EELSMG
Trigger: GCCCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGTTTTTGGAGTCCCGTTaGCCTTGGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLFLESR*PWGTAA
Trigger: AGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAA...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCACTGGCAGCACTTTTTaGAGTCCCGTTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLTGSTF*SPVGLG
Trigger: CCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGGGGCTAGGCATACTTaGCAGGCACTCGATCCAAAT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPGARHT*QALDPN
Trigger: ATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTTGAGCTGAGCTCCTaGCTCCCAGCGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLELSS*LPAGLG
Trigger: GCCTAGCCCCGCTGGGAGCCAGGAGCTCAGCTCAAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGCACTGTGCCCATCCTaGTCTTCCAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQALCPS*SSRKEA
Trigger: TGCCTCTTTCCTGGAAGACCAGGATGGGCACAGTGC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGGAGCTGATGGCTGCTaGTCTAGGCTTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNGADGC*SRLAGL
Trigger: CAGTCCTGCAAGCCTAGACCAGCAGCCATCAGCTCC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
3UTR CAA 72 bp GTTGGTTCTAAAACTCCCTTAAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCTATCTTGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VGSKTPLKADYT*NGGSQPILGLF
Trigger: AAAGAGGCCCAAGATAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTTTAAGGGAGTTTTAGAACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQPFLFI*GEWHHL
Trigger: GAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLPFLFI*GEWHHL
Trigger: GAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCGAGTCATCAGCTTCTaGTCAGCCTGGCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMRVISF*SAWRWG
Trigger: CCCCCACCGCCAGGCTGATCAGAAGCTGATGACTCG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGGAGTCAGGACACACTaGACCCTACACTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNGVRTH*TLHFCP
Trigger: TGGGCAGAAGTGTAGGGTTCAGTGTGTCCTGACTCC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAGGCAGACTATACCTTaGACGGGGGAAGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNRQTIP*TGEASL
Trigger: TAGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTTQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACTTCACTAGCATTCACACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VAIACRYWLPRRHFTSIHTQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...GTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGCGGCCTCCAAGAGCTaGGATACTCATGGTGATTGC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHAASKS*DTHGDC
Trigger: GCAATCACCATGAGTATCTCAGCTCTTGGAGGCCGC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTCCATCCGCACTGTTTaGGCCAGGAGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFSIRTV*ARSGSC
Trigger: GCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAATTTCCTCACCTCTTaGGCTGAGCTCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNNFLTS*AELLAP
Trigger: GGGAGCCAGGAGCTCAGCTCAAGAGGTGAGGAAATT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFRDSRD*SGTGAD
Trigger: ATCAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCACCAGGCGGAGTCCTaGCCTGGGTGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMHQAES*PGCQDL
Trigger: CAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNGLLCC*SSYQQG
Trigger: TCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHGLLCC*SSYQQG
Trigger: TCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCCTCCTGGGCTGCTGTaGTGTTGCTCTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNPPGLL*CCSSYQ
Trigger: CTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCTTTGGGTCTGCCTTTaGATCCTCCTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLWVCL*ILLGCC
Trigger: ACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGGCCCCCTTTGGGTCTaGCTTTGCATCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILGPLWV*LCILLG
Trigger: GCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGCTTTTGTGGGTGCTaGTCTGGGAAGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFCFCGC*SGKSMG
Trigger: GCCCATGCTCTTCCCAGAGCAGCACCCACAAAAGCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGCTTGCTTTTGTGGGTaGTGCTCTGGGAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLACFCG*CSGKSM
Trigger: CATGCTCTTCCCAGAGCAGCACCCACAAAAGCAAGC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGTACCCTCTGCACAGTaGTTGGCACACACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFVPSAQ*LAHTEH
Trigger: GTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTAC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCACTCATTCATTGAGTaGCTGTGTGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGHSFIE*LCVSVH
Trigger: GTGGACACTAACACACAGGCACTCAATGAATGAGTG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCACTCATTCATTGAGTaGCTGTGTGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLHSFIE*LCVSVH
Trigger: GTGGACACTAACACACAGGCACTCAATGAATGAGTG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCATCTGCAAAATTCTGTaGCTTTTTAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSICKIL*LFRHER
Trigger: TCTCTCATGTCTAAAAAGGCACAGAATTTTGCAGAT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCCTGATATTGTAGGGTaGCAGCTTCTTGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLPDIVG*QLLVIL
Trigger: GAGGATTACAAGAAGCTGGCACCCTACAATATCAGG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAGGGCAGCTCTATGGTaGGACCCTCCGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFRAALW*DPPIHP
Trigger: AGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGCCTTGGGGAACTGCTaGTGGGGCTGGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILALGNC*WGWEEL
Trigger: CAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGCACTCGATCCAAATTaGCCGAGACGCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLALDPN*PRRFGP
Trigger: AGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATACTGGAGCTGATGGCTaGTGGTCTAGGCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNTGADG*WSRLAG
Trigger: TCCTGCAAGCCTAGACCAGCAGCCATCAGCTCCAGT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLCLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCATGCCTTCCACGTCTaGGGCCACCAGGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQHAFHV*GHQAES
Trigger: GGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGTCCTCTCAGAGTATaGAGTGCTGCCACATGGAGG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQCPLRV*SAATWR
Trigger: CCTCCATGTGGCAGCACTCCATACTCTGAGAGGACA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTAAAGCAATATTCATaGCAGCAGATACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLKQYS*QQIPRC
Trigger: ACATCTTGGTATCTGCTGCCATGAATATTGCTTTAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 4 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGGGAGGGTGTTAACCTaGCAGGAACTGTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHGRVLT*QELCTL
Trigger: GAGGGTACACAGTTCCTGCCAGGTTAACACCCTCCC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGAAGCCAGCCTATCTTaGGCCTCTTTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPEASLS*ASLPCL
Trigger: AAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAGACTGAAGTGGCACTaGAGCTTCCTCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFRLKWH*SFLSRS
Trigger: GCTCCGAGAGAGGAAGCTCCAGTGCCACTTCAGTCT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCAGCAGAGACTGAAGTaGCACTGGAGCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLQQRLK*HWSFLS
Trigger: AGAGAGGAAGCTCCAGTGCCACTTCAGTCTCTGCTG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGCGCTCCTCCTCGCCTaGTGGCAGAGGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMALLLA*WQRLPF
Trigger: AAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCTGAGGGCAGCTCTATaGTGCGACCCTCCGATTCAT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLRAAL*CDPPIH
Trigger: ATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTACTGGCAGCACTTTTTaGAGTCCCGTTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFTGSTF*SPVGLG
Trigger: CCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILALLGR*QDVGVL
Trigger: GAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLCWGP*KPPHQP
Trigger: TGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGCCAGGAGTGGATCTTaGCAGAGCAGGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMARSGS*QSRWVL
Trigger: CAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCTGGGTGTCAGGATCTaGAGGCGGACAATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLGVRI*RRTISS
Trigger: TGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCACCAGGCGGAGTCCTaGCCTGGGTGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQHQAES*PGCQDL
Trigger: CAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKISRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGGACAGGCTTACATCTaGCCAGCCATCCAACGAGTT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNGQAYI*PAIQRV
Trigger: AACTCGTTGGATGGCTGGGCAGATGTAAGCCTGTCC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCCTCCTTGTCTTTGTTaGCTGGGGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQPPCLC*LGKTCL
Trigger: CAAACAGGTCTTCCCCAGGCAACAAAGACAAGGAGG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGATACTCATGGTGATTaGTCCGCAGCTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQDTHGD*SAALLS
Trigger: TGAGAGGAGAGCTGCGGAGCAATCACCATGAGTATC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLPSDSS*LVIQLL
Trigger: CAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGCACTCGATCCAAATTaGCCGAGACGCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNALDPN*PRRFGP
Trigger: AGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCCTCCTTGTCTTTGTTaGCTGGGGAAGACCTCATGC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFPPCLC*LGKTSC
Trigger: GCATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNCLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHCLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGTCCTCTCAGAGTATaGAGTGCTGCCACATGGAGG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNCPLRV*SAATWR
Trigger: CCTCCATGTGGCAGCACTCCATACTCTGAGAGGACA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCTGAGGAAGAGCAGTTaGTATTTAGTGTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLRKSS*YLVWVH
Trigger: ATGTACCCACACTAAATACCAACTGCTCTTCCTCAG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGAAGCCAGCCTATCTTaGGCCTCTTTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLEASLS*ASLPCL
Trigger: AAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATCTTGTAATCCTCAGTaGTCATCTTGTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTSCNPQ*SSCSQR
Trigger: CCTCTGGCTACAAGATGACCACTGAGGATTACAAGA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTGTCCCCCTTCAGCGTaGTTCGCACTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHCPPSA*FALSSA
Trigger: AGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTTTTTGGAGTCCCGTTaGCCTTGGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHFLESR*PWGTAA
Trigger: AGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGGGGCTAGGCATACTTaGCAGGCACTCGATCCAAAT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFGARHT*QALDPN
Trigger: ATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
3UTR CAA 72 bp CAATTTACCCACCAGGGATCATCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAAGGGAGTCAGGACACA +
Preference number: 4 (lower is better)
Translates to: QFTHQGSSTVFN*AHYKPQGSQDT
Trigger: TGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQALLGR*QDVGVL
Trigger: GAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGAGCAGAGGATCGGCTaGCTGCATGGACAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILEQRIG*LHGQAY
Trigger: GTAAGCCTGTCCATGCAGTCAGCCGATCCTCTGCTC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFSQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTCTCAGAGTATGGAGTaGTGCCACATGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNSQSME*CHMEAS
Trigger: AGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCACTCATTCATTGAGTaGCTGTGTGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPHSFIE*LCVSVH
Trigger: GTGGACACTAACACACAGGCACTCAATGAATGAGTG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAATCTGCAAAATTCTGTaGCTTTTTAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPAICKIL*LFRHER
Trigger: TCTCTCATGTCTAAAAAGGCACAGAATTTTGCAGAT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCATCTGCAAAATTCTGTaGCTTTTTAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIICKIL*LFRHER
Trigger: TCTCTCATGTCTAAAAAGGCACAGAATTTTGCAGAT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAGGTGGACCAGGAGCTaGCTGGGAGCCTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMRWTRS*LGAFPL
Trigger: AAGAGGAAAGGCTCCCAGGCAGCTCCTGGTCCACCT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCCTCCTTGTCTTTGTTaGCTGGGGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNPPCLC*LGKTCL
Trigger: CAAACAGGTCTTCCCCAGGCAACAAAGACAAGGAGG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCCTCCTTGTCTTTGTTaGCTGGGGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHPPCLC*LGKTCL
Trigger: CAAACAGGTCTTCCCCAGGCAACAAAGACAAGGAGG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGAGGCTTCCCTTTGGTaGGGCCTCCAAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMEASLW*GLQELR
Trigger: TCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGAGGCTTCCCTTTGGTaGGGCCTCCAAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILEASLW*GLQELR
Trigger: TCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPVRTFI*LRTLLR
Trigger: GCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAAC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFPSDSS*LVIQLL
Trigger: CAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQRAGGS*LFSEGP
Trigger: CGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILAFASS*AAVLLL
Trigger: GAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAGCCAAGGCCCCCTTTaGGTCTGCCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMSQGPL*VCLCIL
Trigger: GAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATTAAAGCAATATTCATaGCAGCAGATACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: EASLSWASLPCLSSTGPALKQYS*QQIPRC
Trigger: ACATCTTGGTATCTGCTGCCATGAATATTGCTTTAA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTAAAGCAATATTCATaGCAGCAGATACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLKQYS*QQIPRC
Trigger: ACATCTTGGTATCTGCTGCCATGAATATTGCTTTAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCATGTCCCAAGTACCTaGGGCCCCAGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQHVPST*GPSSCH
Trigger: GTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAGTTGGTATTTAGTGTaGGTACATGCCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSWYLV*VHALQR
Trigger: CCTCTGGAGGGCATGTACCCACACTAAATACCAACT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGAAGCCAGCCTATCTTaGGCCTCTTTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNEASLS*ASLPCL
Trigger: AAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGAAGCCAGCCTATCTTaGGCCTCTTTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFEASLS*ASLPCL
Trigger: AAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCTGTTCTCACCAGACTaGCAGCACTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLFSPD*QHFLES
Trigger: GGACTCCAAAAAGTGCTGCCAGTCTGGTGAGAACAG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTTGTCTTTGTTGCCTaGGGAAGACCTCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLVFVA*GRPHAF
Trigger: GAAGGCATGAGGTCTTCCCCAGGCAACAAAGACAAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGACCGCTTGCAGCCTCTaGCCTCCGTTTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILTACSL*PPFLFI
Trigger: GATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGGTGTCACGGTGAATaGAGATCTGATCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFWCHGE*RSDPGD
Trigger: ATCTCCTGGATCAGATCTTCATTCACCGTGACACCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAGAAGGGCAAAAGCATaGAGAAATCAAACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLRRAKA*RNQTGR
Trigger: CCTCCCTGTTTGATTTCTTCATGCTTTTGCCCTTCT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGGTTGAGCCTGAAATaGCATCATGGGCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNWLSLK*HHGHKA
Trigger: CGCTTTATGCCCATGATGTCATTTCAGGCTCAACCA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFTQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNTQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQRDSRD*SGTGAS
Trigger: GGAAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGCACTTTCATCTGCTTaGGAACGTTATTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNALSSA*ERYCAP
Trigger: AGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHTPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGC +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQVRTFI*LRTLLR
Trigger: GCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAAC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTGCCAGTGCTCTTCTTaGCCGCTGACAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQCQCSS*PLTGRR
Trigger: CCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGCA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324823.10
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILSCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAGCCAAGGCCCCCTTTaGGTCTGCCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQSQGPL*VCLCIL
Trigger: GAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTCCTTAAAGCAATATTCATaGCAGCAGATACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: AFTYSFTKRIPLVVELESLKQYS*QQIPRC
Trigger: ACATCTTGGTATCTGCTGCCATGAATATTGCTTTAA...GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAACTTGGGGCAAAACTaGGGACAGCCAAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNNLGQN*GQPNLS
Trigger: GGACAAATTTGGCTGTCCCCAGTTTTGCCCCAAGTT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCAACAGTCTTCAACTTaGCCCATTATAAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPQQSST*PIISLK
Trigger: CTTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGAAAGCATCTCAGTTTaGAGGCATTTTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFESISV*RHFHGR
Trigger: CCGCCCATGAAAATGCCTCCAAACTGAGATGCTTTC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAGTTGGTATTTAGTGTaGGTACATGCCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFSWYLV*VHALQR
Trigger: CCTCTGGAGGGCATGTACCCACACTAAATACCAACT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAGTTGGTATTTAGTGTaGGTACATGCCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNSWYLV*VHALQR
Trigger: CCTCTGGAGGGCATGTACCCACACTAAATACCAACT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACAGTTGGTATTTAGTGTaGGTACATGCCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHSWYLV*VHALQR
Trigger: CCTCTGGAGGGCATGTACCCACACTAAATACCAACT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAGACTGAAGTGGCACTaGAGCTTCCTCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILRLKWH*SFLSRS
Trigger: GCTCCGAGAGAGGAAGCTCCAGTGCCACTTCAGTCT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCTGAGGGCAGCTCTATaGTGCGACCCTCCGATTCAT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILLRAAL*CDPPIH
Trigger: ATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTGATGAAAAGGATGTaGCGCGACTCCGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLMKRM*RDSGLR
Trigger: CCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGACTGGCAGCACTTTTTaGAGTCCCGTTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMTGSTF*SPVGLG
Trigger: CCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILLLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGGAATGTTCCTCTCTaGTCATTTGGCAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNWNVPL*SFGRKN
Trigger: GTTCTTCCTGCCAAATGATCAGAGAGGAACATTCCA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTGAGATACTCATGGTaGTTGCTCCGCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLRYSW*LLRSSP
Trigger: AGGAGAGCTGCGGAGCAATCACCATGAGTATCTCAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTTCGCGATAAACGGTaGCTGTGTCTCCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLRDKR*LCLLGR
Trigger: CCTACCCAGGAGACACAGGCACCGTTTATCGCGAAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTGGGTGTCAGGATCTaGAGGCGGACAATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLGVRI*RRTISS
Trigger: TGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCCTCCTGGGCTGCTGTaGTGTTGCTCTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQPPGLL*CCSSYQ
Trigger: CTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGAACTGTGTACCCTCTaGACAGTGCTTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMELCTL*TVLGTH
Trigger: GTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTCACTGAAAGCTCTCTaGTCAGATCAGCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMSLKAL*SDQLAP
Trigger: GGGGGCTAGCTGATCTGAGCAGAGAGCTTTCAGTGA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCACTCATTCATTGAGTaGCTGTGTGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNHSFIE*LCVSVH
Trigger: GTGGACACTAACACACAGGCACTCAATGAATGAGTG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCACTCATTCATTGAGTaGCTGTGTGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHHSFIE*LCVSVH
Trigger: GTGGACACTAACACACAGGCACTCAATGAATGAGTG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCATCTGCAAAATTCTGTaGCTTTTTAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGICKIL*LFRHER
Trigger: TCTCTCATGTCTAAAAAGGCACAGAATTTTGCAGAT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCCTGATATTGTAGGGTaGCAGCTTCTTGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNPDIVG*QLLVIL
Trigger: GAGGATTACAAGAAGCTGGCACCCTACAATATCAGG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTCCGGATCCCACATTaGCATCACTCAACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLRIPH*HHSTVH
Trigger: GTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGCACTCGATCCAAATTaGCCGAGACGCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILALDPN*PRRFGP
Trigger: AGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTCTTGCCAGAGCAGGTaGGTCCTGGCTCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQSCQSR*VLALLR
Trigger: TCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILCLSQE*ILPEQV
Trigger: CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCAGCAGAGACTGAAGTaGCACTGGAGCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILQQRLK*HWSSCL
Trigger: AAGGCATGAGCTCCAGTGCCACTTCAGTCTCTGCTG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTGGAGTGCTGCCACATaGAGGCTTCTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQWSAAT*RLLLHG
Trigger: GCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGATCGGCTGACTGCATaGACAGGCTTACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQDRLTA*TGLHLP
Trigger: GGGCAGATGTAAGCCTGTCCATGCAGTCAGCCGATC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTCTTGTAATCCTCAGTaGTCATCTTGTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNSCNPQ*SSCSQR
Trigger: CCTCTGGCTACAAGATGACCACTGAGGATTACAAGA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTGTCCCCCTTCAGCGTaGTTCGCACTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILCPPSA*FALSSA
Trigger: AGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTGAGGGCAGCTCTATaGTGCGACCCTCCGATTCAT +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLRAAL*CDPPIH
Trigger: ATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCTTGTCTTTGTTGCCTaGGGAAGACCTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILLVFVA*GRPELL
Trigger: CAGGAGCTCAGGTCTTCCCCAGGCAACAAAGACAAG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQPFLFI*GEWHHL
Trigger: GAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTTCTCCATGGCGAATaGGTCCTCAATGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLLHGE*VLNAAD
Trigger: GTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTTCAGGGAGCAGAATTaGGGGCAAATTAATCAGCTA +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHFREQN*GQINQL
Trigger: TAGCTGATTAATTTGCCCTCAATTCTGCTCCCTGAA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCCCAGAGGAAGAGTGTaGTTTCACACCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILPRGRV*FHTFCS
Trigger: AGAGCAGAAGGTGTGAAATCACACTCTTCCTCTGGG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGACGTTGCTATAGCGTaGAGATACTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILDVAIA*RYWLPR
Trigger: TCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTCGGATCTCACGGTTaGAGTAAGTACAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLGSHG*SKYRSL
Trigger: GAGGGATCTGTACTTACTGCAACCGTGAGATCCGAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCCCACAAGCCAATGTaGATAGGGCTCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQAHKPM*IGLRNW
Trigger: CCAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGATACTCATGGTGATTaGTCCGCAGCTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILDTHGD*SAALLS
Trigger: TGAGAGGAGAGCTGCGGAGCAATCACCATGAGTATC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGAGGCTTCTTCTCCATaGCGAATGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILEASSP*RMSPQC
Trigger: GCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTAAAGCAATATTCATaGCAGCAGATACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLKQYS*QQIPRC
Trigger: ACATCTTGGTATCTGCTGCCATGAATATTGCTTTAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCTGAGGAAGAGCAGTTaGTATTTAGTGTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLRKSS*YLVWVH
Trigger: ATGTACCCACACTAAATACCAACTGCTCTTCCTCAG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCTGTTCTCACCAGACTaGCAGCACTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILLFSPD*QHFLES
Trigger: GGACTCCAAAAAGTGCTGCCAGTCTGGTGAGAACAG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTGTTCTCACCAGACTaGCAGCACTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLFSPD*QHFLES
Trigger: GGACTCCAAAAAGTGCTGCCAGTCTGGTGAGAACAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAATGCCATTACTCTGTaGCAGTGCCTGCTATGTGGT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILNAITL*QCLLCG
Trigger: ACCACATAGCAGGCACTGTCACAGAGTAATGGCATT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGTGCTTGGCACACACTaGGCACAAAATCAATGCTTG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMVLGTH*AQNQCL
Trigger: CAAGCATTGATTTTGTGCTCAGTGTGTGCCAAGCAC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAGGAAAATGGGTCACTaGAAGCTCTCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMRKMGH*KLSAQI
Trigger: GATCTGAGCAGAGAGCTTTCAGTGACCCATTTTCCT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGTTGGGGACTACAGCTaGGGAAGAGCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQVGDYS*GRAVGI
Trigger: AATACCAACTGCTCTTCCTCAGCTGTAGTCCCCAAC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGACTCAACTGTGCACTTaGCCTTGCAGCATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILTQLCT*PCSICV
Trigger: AACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCAGAGTATGGAGTGCTaGCACATGGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQQSMEC*HMEASS
Trigger: AGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGACACCTTCTGCTCTTTaGAAGCCTATGCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMTPSAL*KPMPLG
Trigger: TCCCAAAGGCATAGGCTTGCAAAGAGCAGAAGGTGT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTTCAGGGATCCAGGATaGCCAGAGGAAGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQFRDPG*PEEECD
Trigger: ATCACACTCTTCCTCTGGGCATCCTGGATCCCTGAA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAGAGGATCGGCTGACTaGATGGACAGGCTTACATCT +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQRGSAD*MDRLTS
Trigger: AGATGTAAGCCTGTCCATGCAGTCAGCCGATCCTCT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTGGGCCTCTTTACCTTaGCTTTCATCCACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQWASLP*LSSTGP
Trigger: AGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCATCTGCAAAATTCTGTaGCTTTTTAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPICKIL*LFRHER
Trigger: TCTCTCATGTCTAAAAAGGCACAGAATTTTGCAGAT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 4 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAGTTGGTATTTAGTGTaGGTACATGCCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILSWYLV*VHALQR
Trigger: CCTCTGGAGGGCATGTACCCACACTAAATACCAACT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTTGCCTTTCATCCACTaGTCCTGCACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLPFIH*SCTETQ
Trigger: CTGAGTCTCAGTGCAGGACCAGTGGATGAAAGGCAA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTGTTCTCACCAGACTaGCAGCACTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLFSPD*QHFLES
Trigger: GGACTCCAAAAAGTGCTGCCAGTCTGGTGAGAACAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGATGGAATTCCTGTTTaGTCCTCTTTGGTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMDGIPV*SSLVEP
Trigger: AGGCTCAACCAAAGAGGATCAAACAGGAATTCCATC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCCAATCCCTAGCATTTaGTGTCTGCAATTTACCCAC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILPIPSI*CLQFTH
Trigger: GTGGGTAAATTGCAGACATCAAATGCTAGGGATTGG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTCTCACCAACGGGGTaGCTTTTATTTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLSPTG*LLFPSL
Trigger: GAGTGAAGGAAATAAAAGTCACCCCGTTGGTGAGAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGATCTGCAAAATTCTGTaGCTTTTTAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQICKIL*LFRHER
Trigger: TCTCTCATGTCTAAAAAGGCACAGAATTTTGCAGAT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILVRTFI*LRTLLR
Trigger: GCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAAC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTTCACTTGCGGGGGCTaGAATATAAATGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQFTCGG*NINVRL
Trigger: CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGATAGCGTGCAGATACTaGCTTCCCAGAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQIACRY*LPRRHF
Trigger: GAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTAT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTAAAGCAATATTCATaGCAGCAGATACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLKQYS*QQIPRC
Trigger: ACATCTTGGTATCTGCTGCCATGAATATTGCTTTAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 4 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGGGAAGATTTATGTGTaGAGTTCAGGGAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMGKIYV*SSGSRI
Trigger: AATTCTGCTCCCTGAACTTCACACATAAATCTTCCC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGATGTCTAAGATGGGATaGGAATATCACCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILMSKMG*EYHLHR
Trigger: CCTGTGAAGGTGATATTCTCATCCCATCTTAGACAT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTAGCATTTGATGTCTaGAATTTACCCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLAFDV*NLPTRD
Trigger: ATCCCTGGTGGGTAAATTGCAGACATCAAATGCTAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGC +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQVRTFI*LRTLLR
Trigger: GCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAAC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTAGGGAAGCCAAGATaGAATTCCTGTTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLGKPR*NSCLIL
Trigger: GAGGATCAAACAGGAATTCCATCTTGGCTTCCCTAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 4 (lower is better)
Translates to: VCESNLFSAESISVWRHFFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR TCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTATGCAACTTCAACTTaGGAAGGGCAAAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMYATST*EGQKHE
Trigger: TTCATGCTTTTGCCCTTCTCAAGTTGAAGTTGCATA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTAAACACTAGCCTATaGCAATCCCTAGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLNTSL*QSLAFD
Trigger: ATCAAATGCTAGGGATTGGCATAGGCTAGTGTTTAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTGAGGAAGAGCAGTTaGTATTTAGTGTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLRKSS*YLVWVH
Trigger: ATGTACCCACACTAAATACCAACTGCTCTTCCTCAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
3UTR CAA 72 bp TCAGCTATCAAGATTCCAACAGACACAGATATCACTTaGATCAGTAGCATCCTAAAATCACATCCTACTGAA +
Preference number: 4 (lower is better)
Translates to: SAIKIPTDTDIT*ISSILKSHPTE
Trigger: TTCAGTAGGATGTGATTTTAGGATGCTACTGATCAAAGTGATATCTGTGTCTGTTGGAATCTTGATAGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAAATTTTCCAACACATaGCAACATACCTGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMKFSNT*QHTCKG
Trigger: TCCCTTACAGGTATGTTGGCATGTGTTGGAAAATTT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTCAAGAAATGTTAGCTaGTTTTCCACCTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILSRNVS*FSTSLI
Trigger: GATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGACCCTAAAACCCACTTaGGAAGATTTATGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQTLKPT*EDLCVK
Trigger: CTTCACACATAAATCTTCCCAAGTGGGTTTTAGGGT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CCA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTTCACAGGATTATTATaGGGATTAATGCCATTACTC +
Preference number: 4 (lower is better)
Translates to: GERRRHFIIKSRAEALILFTGLL*GLMPLL
Trigger: GAGTAATGGCATTAATCCCCATAATAATCCTGTGAA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR GCA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGATCTGCAAAATTCTGTaGCTTTTTAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: RRRHFIIKSRAEALILYQICKIL*LFRHER
Trigger: TCTCTCATGTCTAAAAAGGCACAGAATTTTGCAGAT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS GCA 90 bp GCTAGCAGCTGCACACAGCCTTCCTCTCTCGGAGCCGATGTCTACTaGAGCCAAGCCTTCAGGCCGGGAGCCCGTGGCTCCGGATCCCAC +
Preference number: 5 (lower is better)
Translates to: ASSCTQPSSLGADVY*SQAFRPGARGSGSH
Trigger: GTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCCGAGAGAGGAAGGCTGTGTGCAGCTGCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370270.6
ENST00000436731.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 90 bp ACGTCTGGGGCCACCAGGCGGAGTCCTGCCCTGGGTGTCAGGATCTaGAGGCGGACAATTTCCTCACCTCTTGAGCTGAGCTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: TSGATRRSPALGVRI*RRTISSPLELSSWL
Trigger: GAGCCAGGAGCTCAGCTCAAGAGGTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS GCA 90 bp ACTGGAGCTCATGCCTTCCACGTCTGGGGCCACCAGGCGGAGTCCTaGCCTGGGTGTCAGGATCTGCAGGCGGACAATTTCCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: TGAHAFHVWGHQAES*PGCQDLQADNFLTS
Trigger: AGAGGTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATGAGCTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS GCA 90 bp GGAAGACCTCATGCCTTCCACGTCTGGGGCCACCAGGCGGAGTCCTaGCCTGGGTGTCAGGATCTGCAGGCGGACAATTTCCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: GRPHAFHVWGHQAES*PGCQDLQADNFLTS
Trigger: AGAGGTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATGAGGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS CCA 90 bp AGCTCATGCCTTCCACGTCTGGGGCCACCAGGCGGAGTCCTGCCCTaGGTGTCAGGATCTGCAGGCGGACAATTTCCTCACCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SSCLPRLGPPGGVLP*VSGSAGGQFPHLLS
Trigger: GCTCAAGAGGTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS CCA 90 bp CGGAGCCGATGTCTACTGCAGCCAAGCCTTCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGCCATCACTCAACTGTGCACTTGACC +
Preference number: 5 (lower is better)
Translates to: RSRCLLQPSLQAGSP*LRIPHCHHSTVHLT
Trigger: GGTCAAGTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 90 bp ACCTCATGCCTTCCACGTCTGGGGCCACCAGGCGGAGTCCTGCCCTaGGTGTCAGGATCTGCAGGCGGACAATTTCCTCACCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: TSCLPRLGPPGGVLP*VSGSAGGQFPHLLS
Trigger: GCTCAAGAGGTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS CCA 90 bp TGGGGAAGACCTGAGCTCCTGGCTCCCAGCGGGGCTAGGCATACTTaGCAGGCACTCGATCCAAATTGCCCGAGACGCTTTGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: WGRPELLAPSGARHT*QALDPNCPRRFGPA
Trigger: GGCAGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCCGCTGGGAGCCAGGAGCTCAGGTCTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436731.6
ENST00000447792.2
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGGAGTCCCGTTGGCCTaGGGGAACTGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSGVPLA*GNCCWG
Trigger: GCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 90 bp ACGTCTGGGGCCACCAGGCGGAGTCCTGCCCTGGGTGTCAGGATCTaGAGGCGGACAATTTCCTCACCTCTTGAGCTGTTTGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: TSGATRRSPALGVRI*RRTISSPLELFEPG
Trigger: TCCTGGCTCAAACAGCTCAAGAGGTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS CCA 90 bp GAGCTGTTTGAGCCAGGAGTGGATCTTGCCAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCGTCCTCTTCCACCACCTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: ELFEPGVDLARAGGS*LFSEGPSSSTTSTL
Trigger: GAGGGTGGAGGTGGTGGAAGAGGACGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS CCA 90 bp GACCTGTTTGAGCCAGGAGTGGATCTTGCCAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCGTCCTCTTCCACCACCTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: DLFEPGVDLARAGGS*LFSEGPSSSTTSTL
Trigger: GAGGGTGGAGGTGGTGGAAGAGGACGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS CCA 90 bp GCACTGTTTGAGCCAGGAGTGGATCTTGCCAGAGCAGGTGGGTCCTaGCTCTTCTCAGAAGGCCCGTCCTCTTCCACCACCTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: ALFEPGVDLARAGGS*LFSEGPSSSTTSTL
Trigger: GAGGGTGGAGGTGGTGGAAGAGGACGGGCCTTCTGAGAAGAGCCAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000447792.2
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 90 bp GGAGAATGGCACCACCTCCTCCTCCTCCTCCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGATATTGTAGGGTGCCTGGCGTTGCAT +
Preference number: 5 (lower is better)
Translates to: GEWHHLLLLLLLGVP*CRAAPDIVGCLALH
Trigger: ATGCAACGCCAGGCACCCTACAATATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAGGAGGAGGAGGAGGAGGTGGTGCCATTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS TCA 90 bp AGACTGAAGTGGCACTGGAGCTTGCAGCATCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCAAGTCCCTCTGGAGCTCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RLKWHWSLQHLCWGP*KPPHQPSPSGALWS
Trigger: GCTCCAGAGAGCTCCAGAGGGACTTGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAGCTCCAGTGCCACTTCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447792.2
CDS GCA 90 bp CAGCCAAGCCTTCAGGCCGGGAGCCCGTGGCTCCGGATCCCACATTaGCATCACTCAACTGTGCACTTGACCTTGCAGCATCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: QPSLQAGSPWLRIPH*HHSTVHLTLQHLCW
Trigger: CCAACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAGGCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 90 bp CTCCGGCCTGAGGGCAGCTCTATGGTGCGACCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTGTCCCCCTTCAGCGTGGTTCGCACT +
Preference number: 5 (lower is better)
Translates to: LRPEGSSMVRPSDSS*LVIQLLSPFSVVRT
Trigger: AGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAGGCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 90 bp GCCACACAGCCCAGTGGACACATGAGAGGTGGACCAGGAGCTGCCTaGGAGCCTTTCCTCTTTGCTTTTGGCCCTGACAGACACCCGGAA +
Preference number: 5 (lower is better)
Translates to: ATQPSGHMRGGPGAA*EPFLFAFGPDRHPE
Trigger: TTCCGGGTGTCTGTCAGGGCCAAAAGCAAAGAGGAAAGGCTCCCAGGCAGCTCCTGGTCCACCTCTCATGTGTCCACTGGGCTGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS CCA 90 bp CCTGCCTCCAGATTTGGCCACACAGCCCAGTGGACACATGAGAGGTaGACCAGGAGCTGCCTGGGAGCCTTTCCTCTTTGCTTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: PASRFGHTAQWTHER*TRSCLGAFPLCFWP
Trigger: GGGCCAAAAGCAAAGAGGAAAGGCTCCCAGGCAGCTCCTGGTCCACCTCTCATGTGTCCACTGGGCTGTGTGGCCAAATCTGGAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGAGTCCCGTTGGCCTaGGGGAACTGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGVPLA*GNCCWG
Trigger: GCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 90 bp CACTCAACTGTGCACTTGACCTTGCAGCATCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCAAGTCCCTCTGGAGCTCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: HSTVHLTLQHLCWGP*KPPHQPSPSGALWS
Trigger: GCTCCAGAGAGCTCCAGAGGGACTTGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 90 bp CCCCCTTTGGGTCTGCCTTTGCATCCTCCTGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGACAGCAGAGACTGAAGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: PPLGLPLHPPGLLCC*SSYQQGQQRLKWHW
Trigger: CCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 90 bp GGGAGCCTTTCCTCTTTGCTTTTGGCCCTGACAGACACCCGGAACTaGGCCACTCAGAGCAGCTGTGTAGGCAAACCCCACCGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GSLSSLLLALTDTRN*ATQSSCVGKPHRAS
Trigger: TGAAGCTCGGTGGGGTTTGCCTACACAGCTGCTCTGAGTGGCGCAGTTCCGGGTGTCTGTCAGGGCCAAAAGCAAAGAGGAAAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS GCA 90 bp CGCCCTTTGGGTCTGCCTTTGCATCCTCCTGGGCTGCTGTGCTGTTaGTCTTCCTATCAGCAGGGACAGCAGAGACTGAAGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: RPLGLPLHPPGLLCC*SSYQQGQQRLKWHW
Trigger: CCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447792.2
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCAGCCAAGGCCCCCTTaGGGTCTGCCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRQPRPP*GLPLHP
Trigger: AGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCAGCCAAGGCCCCCTTaGGGTCTGCCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSQPRPP*GLPLHP
Trigger: AGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLREQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTTGCAGCATCTGTGTaGGGGGCCCTGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLAASV*GALKAS
Trigger: GGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 90 bp GGAGAATGGCACCACCTCCTCCTCCTCCTCCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGATATTGTAGGGTGCCAGCTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: GEWHHLLLLLLLGVP*CRAAPDIVGCQLLV
Trigger: TACAAGAAGCTGGCACCCTACAATATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAGGAGGAGGAGGAGGAGGTGGTGCCATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 90 bp TCCAGCTCTTGTCCCCCTTCAGCGTGGTTCGCACTTTCATCTGCTTaGGAACGTTATTGCGCTCCTCCTCGCCTGGTGGCAGAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SSSCPPSAWFALSSA*ERYCAPPRLVAEAS
Trigger: GGAAGCCTCTGCCACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCAATGCTGCTGACGAGCCAGGAGTGGATCTaGCCAGAGCAGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LPHGGFFSMANESSMLLTSQEWI*PEQVGP
Trigger: AGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCT...CGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCAATGCTGCTGACGCTTGCAGCATCTGTGTaGGGGGCCCTGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LPHGGFFSMANESSMLLTLAASV*GALKAS
Trigger: GGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAG...CGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGCAGAGGCTTCCCTTaGGTGCGGCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGRGFP*VRPPRA
Trigger: AGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GCAGATACTGGCTTCCCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGGGAGTCCCGTTGGCCTaGGGGAACTGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ADTGFPEDTSLAFTYSFTGVPLA*GNCCWG
Trigger: GCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCC...CGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTTTTTGGAGTCCCGTaGGCCTTGGGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLFGVP*ALGNCC
Trigger: GCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGACTGGCAGCACTTTTaGGAGTCCCGTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRDWQHF*ESRWPW
Trigger: CCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGTC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCAATGCTGCTGACGATTGCCCGAGACGCTTaGGTCCTGCCTCCATCCGCA +
Preference number: 5 (lower is better)
Translates to: LPHGGFFSMANESSMLLTIARDA*VLPPSA
Trigger: TGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAAT...CGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS GCA 90 bp GTAATCCAGCTCTTGTCCCCCTTCAGCGTGGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGCTCCTCCTCGCCTGGTGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VIQLLSPFSVVRTFI*LRTLLRSSSPGGRG
Trigger: GCCTCTGCCACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCAGCCAGGAGTGGATCTaGCCAGAGCAGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTSQEWI*PEQVGP
Trigger: AGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCCTTTGGGTCTGCCTTaGCATCCTCCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIPLGLP*HPPGLL
Trigger: CAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCCTTTGGGTCTGCCTTaGCATCCTCCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QSMECCHMEASSPWRMSPPLGLP*HPPGLL
Trigger: CAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGG...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCAGCCAAGGCCCCCTTaGGGTCTGCCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNQPRPP*GLPLHP
Trigger: AGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCAGCCAAGGCCCCCTTaGGGTCTGCCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTQPRPP*GLPLHP
Trigger: AGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKICKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTCCTGCCTCCAGATTaGGCCACACAGCCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLLPPD*ATQPSG
Trigger: TCCACTGGGCTGTGTGGCCAAATCTGGAGGCAGGAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTEQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACTTGCAGCATCTGTGTaGGGGGCCCTGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPALAASV*GALKAS
Trigger: GGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCTTGCAGCATCTGTGTaGGGGGCCCTGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLAASV*GALKAS
Trigger: GGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TGGACAGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTGGCAGAGGCTTCCCTTaGGTGCGGCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: WTVSDLTVAVSTDPSSCPGRGFP*VRPPRA
Trigger: AGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCC...AGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTGCTTGAGAACGTTATaGCGCTCCTCCTCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRCLRTL*RSSSPG
Trigger: ACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCTCCATCCGCACTGTTaGAGCCAGGAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLHPHC*SQEWIL
Trigger: CAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATCCTCAGAACACCGCTaGCAGCCTCTGACCTCCGTT +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPASSEHR*QPLTSV
Trigger: AACGGAGGTCAGAGGCTGCAAGCGGTGTTCTGAGGA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTWAAVL*LFLSAG
Trigger: CCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGCTGCAGCCAAGGCCCCCTTaGGGTCTGCCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: GRAGVQFTCGGWNINVRLQPRPP*GLPLHP
Trigger: AGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTG...CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSTKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRLGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGTCCGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: AFTYSFTKRIPLVVELESEQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGCAGAGGCTTCCCTTaGGTGCGGCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGRGFP*VRPPRA
Trigger: AGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTT +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSLVIQL*SPFSVV
Trigger: AACCACGCTGAAGGGGGACAAGAGCTGGATTACCAA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCAGTTGTCCTCTCAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGACTGGCAGCACTTTTaGGAGTCCCGTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: PVVLSEYGVLPHGGFFSMDWQHF*ESRWPW
Trigger: CCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGTC...CATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CAGAGTATGGAGTGCTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTGGCACTCGATCCAAATaGCCCGAGACGCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: QSMECCHMEASSPWRMSPGTRSK*PETLWS
Trigger: GGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCC...AGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGGCACTCGATCCAAATaGCCCGAGACGCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPAGTRSK*PETLWS
Trigger: GGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 90 bp TCAAAATCAGTCAACACGCCCTTTGGGTCTGCCTTTGCATCCTCCTaGGCTGCTGTGCTGTTGCTCTTCCTATCAGCAGGGACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: SKSVNTPFGSAFASS*AAVLLLFLSAGTAE
Trigger: CTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGGGCGTGTTGACTGATTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447792.2
CDS-3UTR CAA 90 bp GGTGGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGRAGVQFTCGGWNINVRWAAVL*LFLSAG
Trigger: CCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA...CCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNGSQPI*GLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPAKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGEQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCTTGCAGCATCTGTGTaGGGGGCCCTGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGLAASV*GALKAS
Trigger: GGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCACTGTGCACTTGACCTaGCAGCATCTGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTTVHLT*QHLCWG
Trigger: CCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGT...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGCTCCGGATCCCACATaGCCATCACTCAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTAPDPT*PSLNCA
Trigger: TGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGGCAGAGGCTTCCCTTaGGTGCGGCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTGRGFP*VRPPRA
Trigger: AGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTGCTTGAGAACGTTATaGCGCTCCTCCTCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNCLRTL*RSSSPG
Trigger: ACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGCGCACTTTCATCTGCTaGAGAACGTTATTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRRTFIC*RTLLRS
Trigger: GGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCG...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CTGCCACATGGAGGCTTCTTCTCCATGGCGAATGAGTCCTCAATGCTGCTGACGTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTT +
Preference number: 5 (lower is better)
Translates to: LPHGGFFSMANESSMLLTLVIQL*SPFSVV
Trigger: AACCACGCTGAAGGGGGACAAGAGCTGGATTACCAA...CGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGGAGTCCCGTTGGCCTaGGGGAACTGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQGVPLA*GNCCWG
Trigger: GCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCTCCATCCGCACTGTTaGAGCCAGGAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNLHPHC*SQEWIL
Trigger: CAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCTCCATCCGCACTGTTaGAGCCAGGAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILHPHC*SQEWIL
Trigger: CAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGATTGCCCGAGACGCTTaGGTCCTGCCTCCATCCGCA +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLIARDA*VLPPSA
Trigger: TGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAAT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCATTGCCCGAGACGCTTaGGTCCTGCCTCCATCCGCA +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGIARDA*VLPPSA
Trigger: TGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAAT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTCATG +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPAASLSL*PGEDLM
Trigger: CATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTCCTCAGAACACCGCTaGCAGCCTCTGACCTCCGTT +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGSSEHR*QPLTSV
Trigger: AACGGAGGTCAGAGGCTGCAAGCGGTGTTCTGAGGA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAGCCAGGAGTGGATCTaGCCAGAGCAGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTSQEWI*PEQVGP
Trigger: AGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACAGCCAAGGCCCCCTTaGGGTCTGCCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTQPRPP*GLPLHP
Trigger: AGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKITKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPATKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNTKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAGGGAAAGGGGCAGCTaGGCCCTTGAAGTACTTCAT +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNRERGS*ALEVLH
Trigger: ATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCCT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSAEEEQ*VFSVGT
Trigger: TGTACCCACACTAAATACCAACTGCTCTTCCTCAGC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPALGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKILGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACTTGCAGCATCTGTGTaGGGGGCCCTGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLAASV*GALKAS
Trigger: GGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGTAGAGCTGGAGTCCAATTCACTTGCGGGGGCTGGAATATAAATGTGAGGCTGACTGTGCACTTGACCTaGCAGCATCTGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GRAGVQFTCGGWNINVRLTVHLT*QHLCWG
Trigger: CCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGT...CAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGGCAGAGGCTTCCCTTaGGTGCGGCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPGRGFP*VRPPRA
Trigger: AGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CTCAATGCTGCTGACGTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACTGCTTGAGAACGTTATaGCGCTCCTCCTCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LNAADVAIACRYWLPRRHCLRTL*RSSSPG
Trigger: ACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCA...GTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTT +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTLVIQL*SPFSVV
Trigger: AACCACGCTGAAGGGGGACAAGAGCTGGATTACCAA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGAGCTGTCTATGGGCTaGGTGAACACTCCCCGGATG +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGELSMG*VNTPRM
Trigger: CATCCGGGGAGTGTTCACCAAGCCCATAGACAGCTC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGAGCTGTCTATGGGCTaGGTGAACACTCCCCGGATG +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLELSMG*VNTPRM
Trigger: CATCCGGGGAGTGTTCACCAAGCCCATAGACAGCTC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGGAGTCCCGTTGGCCTaGGGGAACTGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNGVPLA*GNCCWG
Trigger: GCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CTCAATGCTGCTGACGTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACCTCCATCCGCACTGTTaGAGCCAGGAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: LNAADVAIACRYWLPRRHLHPHC*SQEWIL
Trigger: CAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAG...GTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGGCACTCGATCCAAATaGCCCGAGACGCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLGTRSK*PETLWS
Trigger: GGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGTGGTAGAGCTGGAGGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTGAGC +
Preference number: 5 (lower is better)
Translates to: LAFTYSFTKRIPLVVELEASLSL*PGEDLS
Trigger: GCTCAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...CTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPAYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGGSQPI*GLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLGSQPI*GLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGACTGTGCACTTGACCTaGCAGCATCTGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLTVHLT*QHLCWG
Trigger: CCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGT...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCCACTCAACTGTGCACTaGACCTTGCAGCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIHSTVH*TLQHLC
Trigger: ACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCCACTCAACTGTGCACTaGACCTTGCAGCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTHSTVH*TLQHLC
Trigger: ACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGCTCCGGATCCCACATaGCCATCACTCAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGAPDPT*PSLNCA
Trigger: TGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTGCTTGAGAACGTTATaGCGCTCCTCCTCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLCLRTL*RSSSPG
Trigger: ACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCACGCACTTTCATCTGCTaGAGAACGTTATTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPARTFIC*RTLLRS
Trigger: GGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCG...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTCCGATTCATCCTGCTaGGTAATCCAGCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNSDSSC*VIQLLS
Trigger: GGACAAGAGCTGGATTACCAAGCAGGATGAATCGGA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCTCCGATTCATCCTGCTaGGTAATCCAGCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTSDSSC*VIQLLS
Trigger: GGACAAGAGCTGGATTACCAAGCAGGATGAATCGGA...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACACTTTTTGGAGTCCCGTaGGCCTTGGGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLFGVP*ALGNCC
Trigger: GCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAG...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGAGGTCCCAGTGCAGTTaGGCTCGTACCTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLRSQCS*ARTCWC
Trigger: GCACCAGCAGGTACGAGCCAAACTGCACTGGGACCT...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTAAAGCAATATCCTCAGAACACCGCTaGCAGCCTCTGACCTCCGTT +
Preference number: 5 (lower is better)
Translates to: LIQEIAHRFTANPTLKAISSEHR*QPLTSV
Trigger: AACGGAGGTCAGAGGCTGCAAGCGGTGTTCTGAGGA...TATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCAGCCAGGAGTGGATCTaGCCAGAGCAGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSQEWI*PEQVGP
Trigger: AGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCCTTTGGGTCTGCCTTaGCATCCTCCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQPLGLP*HPPGLL
Trigger: CAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGTKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGAGTATGGAGACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SHGCSKYRSLQLSSQSMETKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGGGGAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 5 (lower is better)
Translates to: GGSQPILGLFTLPFIHWSAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CGAGTTTCCATGTCCCAAGTACCTGGGGCCCCAGCAGTTGCCACTAGCTTAAGGGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 5 (lower is better)
Translates to: RVSMSQVPGAPAVATSLRAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...CCTTAAGCTAGTGGCAACTGCTGGGGCCCCAGGTACTTGGGACATGGAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCTGCTCTTTGCAAGCCTATGCCTTTGGGAGGCCTGAAGGGAGGGTGTTAACCGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: FCSLQAYAFGRPEGRVLTAEEEQ*VFSVGT
Trigger: TGTACCCACACTAAATACCAACTGCTCTTCCTCAGC...GGTTAACACCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCAAAGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLLGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQEQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLEQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGCTCCGGATCCCACATaGCCATCACTCAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTAPDPT*PSLNCA
Trigger: TGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGTCTCGGATCTCACGGTTGCAGTAAGTACAGATCCCTCCAGTTGTCCTCTCAGCGCACTTTCATCTGCTaGAGAACGTTATTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SLGSHGCSKYRSLQLSSQRTFIC*RTLLRS
Trigger: GGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCG...CTGAGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGGAGCTGTCTATGGGCTaGGTGAACACTCCCCGGATG +
Preference number: 5 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLELSMG*VNTPRM
Trigger: CATCCGGGGAGTGTTCACCAAGCCCATAGACAGCTC...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp GAGCTTCTCATAGCATTTCCCACAGTGAATGGTGTCACGGTGAATGAAGATCTGCTTTTTGGAGTCCCGTaGGCCTTGGGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: ELLIAFPTVNGVTVNEDLLFGVP*ALGNCC
Trigger: GCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAG...CAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGCTATGAGAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGATTGCCCGAGACGCTTaGGTCCTGCCTCCATCCGCA +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQIARDA*VLPPSA
Trigger: TGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAAT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTCCTCAGAACACCGCTaGCAGCCTCTGACCTCCGTT +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSSEHR*QPLTSV
Trigger: AACGGAGGTCAGAGGCTGCAAGCGGTGTTCTGAGGA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000324823.10
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLWAAVL*LFLSAG
Trigger: CCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTCCTTTGGGTCTGCCTTaGCATCCTCCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFPLGLP*HPPGLL
Trigger: CAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGG...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTTKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTGCAAGCCTATGCCTTaGGGAGGCCTGAAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNCKPMP*GGLKGG
Trigger: CCCTCCCTTCAGGCCTCCCAAAGGCATAGGCTTGCA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTLGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPGSQPI*GLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHEQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGCACTCAACTGTGCACTaGACCTTGCAGCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLHSTVH*TLQHLC
Trigger: ACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCACTCAACTGTGCACTaGACCTTGCAGCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGHSTVH*TLQHLC
Trigger: ACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCTCCGGATCCCACATaGCCATCACTCAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPAPDPT*PSLNCA
Trigger: TGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AATGAAGATCTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTGCTCCGGATCCCACATaGCCATCACTCAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: NEDLIQEIAHRFTANPTLAPDPT*PSLNCA
Trigger: TGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGC...AAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGAGCTGTCTATGGGCTaGGTGAACACTCCCCGGATG +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLELSMG*VNTPRM
Trigger: CATCCGGGGAGTGTTCACCAAGCCCATAGACAGCTC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACATTGCCCGAGACGCTTaGGTCCTGCCTCCATCCGCA +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHIARDA*VLPPSA
Trigger: TGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAAT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTCATG +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPASLSL*PGEDLM
Trigger: CATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFWAAVL*LFLSAG
Trigger: CCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHWAAVL*LFLSAG
Trigger: CCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCATCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPASTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCAGAGTCCAGCTGAACCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 5 (lower is better)
Translates to: SRNLQSDAGPTDGRVQLNHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...GTTCAGCTGGACTCTGCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCAGGGAAAGGGGCAGCTaGGCCCTTGAAGTACTTCAT +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPRERGS*ALEVLH
Trigger: ATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCCT...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAAGCCAGCCTATCTTGGGCCTCTTTACCTTGCCTTTCATCCACTGGTCCTGCAGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 5 (lower is better)
Translates to: EASLSWASLPCLSSTGPAAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...TGCAGGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLAEEEQ*VFSVGT
Trigger: TGTACCCACACTAAATACCAACTGCTCTTCCTCAGC...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCACTGTGCACTTGACCTaGCAGCATCTGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLTVHLT*QHLCWG
Trigger: CCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGT...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTTGCTATAGCGTGCAGATACTGGCTTCCCAGAAGACACTTCACTAGCATTCACTCCGATTCATCCTGCTaGGTAATCCAGCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: VAIACRYWLPRRHFTSIHSDSSC*VIQLLS
Trigger: GGACAAGAGCTGGATTACCAAGCAGGATGAATCGGA...GTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGAGCTGTCTATGGGCTaGGTGAACACTCCCCGGATG +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHELSMG*VNTPRM
Trigger: CATCCGGGGAGTGTTCACCAAGCCCATAGACAGCTC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGACTGGCAGCACTTTTaGGAGTCCCGTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNDWQHF*ESRWPW
Trigger: CCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGTC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCTCCATCCGCACTGTTaGAGCCAGGAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLHPHC*SQEWIL
Trigger: CAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGGCACTCGATCCAAATaGCCCGAGACGCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFGTRSK*PETLWS
Trigger: GGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGTAGGGTGCCTGGCGTaGCATACTCACAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHVGCLA*HTHSFL
Trigger: CAAGAAGCTGTGAGTATGCAACGCCAGGCACCCTAC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AATGAAGATCTGATCCAGGAGATCGCCCATCGGTTTACTGCAAATCCCACACTTTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: NEDLIQEIAHRFTANPTLYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...AAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTAEEEQ*VFSVGT
Trigger: TGTACCCACACTAAATACCAACTGCTCTTCCTCAGC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNGSQPI*GLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHGSQPI*GLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTAAGGCAGACTATACCTaGAACGGGGGAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFKADYT*NGGSQP
Trigger: AGGCTGGCTTCCCCCGTTCAAGGTATAGTCTGCCTT...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGGGAGCCTTTCCTCTTaGCTTTTGGCCCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFGSLSS*LLALTD
Trigger: GTCTGTCAGGGCCAAAAGCAAAGAGGAAAGGCTCCC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTGTTT +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLASLSL*PGEDLF
Trigger: AAACAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATACTGTGCACTTGACCTaGCAGCATCTGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNTVHLT*QHLCWG
Trigger: CCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCAGAAGACACTTCACTAGCATTCACGTACTCCTTCACGAAGAGAATCCCTTTGCACTCAACTGTGCACTaGACCTTGCAGCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: PEDTSLAFTYSFTKRIPLHSTVH*TLQHLC
Trigger: ACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG...CAAAGGGATTCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGGCAGAGGCTTCCCTTaGGTGCGGCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILGRGFP*VRPPRA
Trigger: AGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTGCTTGAGAACGTTATaGCGCTCCTCCTCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFCLRTL*RSSSPG
Trigger: ACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTT +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQLVIQL*SPFSVV
Trigger: AACCACGCTGAAGGGGGACAAGAGCTGGATTACCAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAGCCAGGAGTGGATCTaGCCAGAGCAGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILSQEWI*PEQVGP
Trigger: AGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGAGCCAGGAGTGGATCTaGCCAGAGCAGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMSQEWI*PEQVGP
Trigger: AGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCT...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCACCTCTTGAGCTGTTaGAGCCAGGAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHHLLSC*SQEWIL
Trigger: CAAGATCCACTCCTGGCTCAAACAGCTCAAGAGGTG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCCTTTGGGTCTGCCTTaGCATCCTCCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMPLGLP*HPPGLL
Trigger: CAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GAGCTTCTCATAGCATTTCCCACAGTGAATGGTGTCACGGTGAATGAAGATCTGTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: ELLIAFPTVNGVTVNEDLWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...CAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGCTATGAGAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436731.6
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGCAGGAACTGTGTACCCTCTGCACAGTGCTTGGCACACACTGAGCACAAAATCGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 5 (lower is better)
Translates to: GRNCVPSAQCLAHTEHKIDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...GATTTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGGTACACAGTTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGGTTGTTCTTCCTTTCAAGGAACTTACAGAGTGATGCTGGGCCCACAGATGGCCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RLFFLSRNLQSDAGPTDGHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...GCCATCTGTGGGCCCAGCATCACTCTGTAAGTTCCTTGAAAGGAAGAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTTGATGTCTGCAATTTACCCACCAGGGATCATCAACAGTCTTCAACTTGGCCCGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: FDVCNLPTRDHQQSSTWPAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...GGGCCAAGTTGAAGACTGTTGATGATCCCTGGTGGGTAAATTGCAGACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATAGGGAAAGGGGCAGCTaGGCCCTTGAAGTACTTCAT +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNRERGS*ALEVLH
Trigger: ATGAAGTACTTCAAGGGCCAAGCTGCCCCTTTCCCT...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATTTGGCAGGAAGAACAAGCCCACAAGCCAATGTGCATAGGGCTCAGAAACTGTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: HLAGRTSPQANVHRAQKLFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...CAGTTTCTGAGCCCTATGCACATTGGCTTGTGGGCTTGTTCTTCCTGCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTTGGGCCTCTTTACCTaGCCTTTCATCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFLGLFT*PFIHWS
Trigger: GGACCAGTGGATGAAAGGCAAGGTAAAGAGGCCCAA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTGTTT +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHASLSL*PGEDLF
Trigger: AAACAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILEQGAS*SLLPGE
Trigger: TTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTT +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNLVIQL*SPFSVV
Trigger: AACCACGCTGAAGGGGGACAAGAGCTGGATTACCAA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTT +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHLVIQL*SPFSVV
Trigger: AACCACGCTGAAGGGGGACAAGAGCTGGATTACCAA...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGAGCCAGGAGTGGATCTaGCCAGAGCAGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQSQEWI*PEQVGP
Trigger: AGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCAATTTCCTCACCTCTaGAGCTGTTTGAGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHQFPHL*SCLSQE
Trigger: CTCCTGGCTCAAACAGCTCAAGAGGTGAGGAAATTG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMWAAVL*LFLSAG
Trigger: CCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILWAAVL*LFLSAG
Trigger: CCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCCTTTGGGTCTGCCTTaGCATCCTCCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQPLGLP*HPPGLL
Trigger: CAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCAGCCAAGGCCCCCTTaGGGTCTGCCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQQPRPP*GLPLHP
Trigger: AGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACATTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQAEEEQ*VFSVGT
Trigger: TGTACCCACACTAAATACCAACTGCTCTTCCTCAGC...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCTTGCAGCATCTGTGTaGGGGGCCCTGAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQLAASV*GALKAS
Trigger: GGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATCACTCAACTGTGCACTaGACCTTGCAGCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNHSTVH*TLQHLC
Trigger: ACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACCGCACTTTCATCTGCTaGAGAACGTTATTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHRTFIC*RTLLRS
Trigger: GGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCG...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCTTTTTGGAGTCCCGTaGGCCTTGGGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMLFGVP*ALGNCC
Trigger: GCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCTTTTTGGAGTCCCGTaGGCCTTGGGGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILLFGVP*ALGNCC
Trigger: GCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGACTGGCAGCACTTTTaGGAGTCCCGTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMDWQHF*ESRWPW
Trigger: CCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAGTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGGCACTCGATCCAAATaGCCCGAGACGCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMGTRSK*PETLWS
Trigger: GGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TCAAGAAATGTTAGCTGCTTTTCCACCTCCTTAATCCTGCTGGGATCTATACACAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: SRNVSCFSTSLILLGSIHNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...GTGTATAGATCCCAGCAGGATTAAGGAGGTGGAAAAGCAGCTAACATTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCCCTCTGCACAGTGCTaGGCACACACTGAGCACAAA +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILPSAQC*AHTEHK
Trigger: TTTGTGCTCAGTGTGTGCCAAGCACTGTGCAGAGGG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFAEEEQ*VFSVGT
Trigger: TGTACCCACACTAAATACCAACTGCTCTTCCTCAGC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGGAAGCCAGCCTATCTaGGGCCTCTTTACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILGSQPI*GLFTLP
Trigger: AGGCAAGGTAAAGAGGCCCAAGATAGGCTGGCTTCC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGCTCCGGATCCCACATaGCCATCACTCAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMAPDPT*PSLNCA
Trigger: TGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTGAGC +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQASLSL*PGEDLS
Trigger: GCTCAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539731.5
CDS-3UTR CAA 90 bp TGTGGGTACATGCCCTCCAGAGGAAATCCACTACAAATAAATGGAATGTTCCTCTCAACAGTCTTCAACTaGGCCCATTATAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: CGYMPSRGNPLQINGMFLSTVFN*AHYKPQ
Trigger: TTGAGGCTTATAATGGGCCAAGTTGAAGACTGTTGA...GAGGAACATTCCATTTATTTGTAGTGGATTTCCTCTGGAGGGCATGTACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp TTCAACTTGGCCCATTATAAGCCTCAAGGGAGTCAGGACACACTGAACCCTACAGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 5 (lower is better)
Translates to: FNLAHYKPQGSQDTLNPTDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...TGTAGGGTTCAGTGTGTCCTGACTCCCTTGAGGCTTATAATGGGCCAAGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CCTGGATTCACAAGCTCCTCTTTGGTAATGTCTGTGAGTCAAATCTGTTCTCAGTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: PGFTSSSLVMSVSQICSQFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...CTGAGAACAGATTTGACTCACAGACATTACCAAAGAGGAGCTTGTGAATCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGTGCCAAGTCTGATGTaGGGGACTACAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILVPSLM*GTTAEE
Trigger: TTCCTCAGCTGTAGTCCCCAACATCAGACTTGGCAC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTGTTT +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILASLSL*PGEDLF
Trigger: AAACAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGACTGTGCACTTGACCTaGCAGCATCTGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQTVHLT*QHLCWG
Trigger: CCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCTCCGGATCCCACATaGCCATCACTCAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQAPDPT*PSLNCA
Trigger: TGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCCTCCTTGTCTTTGTaGCCTGGGGAAGACCTCATG +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQASLSL*PGEDLM
Trigger: CATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGACGAAGAGAATCCCTTaGGTGGTAGAGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQTKRIP*VVELES
Trigger: GGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGT...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GTCTGTGAGTCAAATCTGTTCTCAGCTGAAAGCATCTCAGTTTGGAGGCATTTTGCAGAGGCCCTCATTTaGTATCAGAAATACTCTAAG +
Preference number: 5 (lower is better)
Translates to: VCESNLFSAESISVWRHFAEALI*YQKYSK
Trigger: CTTAGAGTATTTCTGATACAAAATGAGGGCCTCTGC...AAAATGCCTCCAAACTGAGATGCTTTCAGCTGAGAACAGATTTGACTCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCGCACTTTCATCTGCTaGAGAACGTTATTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILRTFIC*RTLLRS
Trigger: GGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTCCGATTCATCCTGCTaGGTAATCCAGCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILSDSSC*VIQLLS
Trigger: GGACAAGAGCTGGATTACCAAGCAGGATGAATCGGA...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTGGAGTCCAATTCACTaGCGGGGGCTGGAATATAAA +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMWSPIH*RGLEYK
Trigger: TTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTACAGATCCCTCCAGTaGTCCTCTCAGAGTATGGAG +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQYRSLQ*SSQSME
Trigger: CTCCATACTCTGAGAGGACAACTGGAGGGATCTGTA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTGGGGACAGCCAAATTaGTCCACGAGTCATCAGCTT +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQWGQPN*STSHQL
Trigger: AAGCTGATGACTCGTGGACAAATTTGGCTGTCCCCA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGAATCAATGCTTGCTTTaGTGGGTGCTGCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILNQCLL*WVLLWE
Trigger: TTCCCAGAGCAGCACCCACAAAAGCAAGCATTGATT...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGCACTCAACTGTGCACTaGACCTTGCAGCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQHSTVH*TLQHLC
Trigger: ACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTG...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGTCCGATTCATCCTGCTaGGTAATCCAGCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQSDSSC*VIQLLS
Trigger: GGACAAGAGCTGGATTACCAAGCAGGATGAATCGGA...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp CATCATGGGCATAAAGCGCTTTCTAAGCTACAAGAAGCTACACACACAAGCAATGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 5 (lower is better)
Translates to: HHGHKALSKLQEATHTSNDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...ATTGCTTGTGTGTGTAGCTTCTTGTAGCTTAGAAAGCGCTTTATGCCCATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCACAAAATCAATGCTaGCTTTTGTGGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQAQNQC*LLWVLL
Trigger: GAGCAGCACCCACAAAAGCAAGCATTGATTTTGTGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp AGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGTATCAGGCTGAGGAAGAGCAGTaGGTATTTAGTGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: RRRHFIIKSRAEALILYQAEEEQ*VFSVGT
Trigger: TGTACCCACACTAAATACCAACTGCTCTTCCTCAGC...CTGATACAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp GGAGAAAGACGTAGACATTTTATAATTAAATCAAGAGCAGAGGCCCTCATTTTGCACCCTAAAACCCACTaGGGAAGATTTATGTGTGAA +
Preference number: 5 (lower is better)
Translates to: GERRRHFIIKSRAEALILHPKTH*GRFMCE
Trigger: TTCACACATAAATCTTCCCAAGTGGGTTTTAGGGTG...CAAAATGAGGGCCTCTGCTCTTGATTTAATTATAAAATGTCTACGTCTTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGTTCACAAGCTCCTCTTaGGTAATGTCTGTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMFTSSS*VMSVSQ
Trigger: TTGACTCACAGACATTACCAAAGAGGAGCTTGTGAA...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS-3UTR CAA 90 bp ATTCTGTGCCTTTTTAGACATGAGAGAGGCTGTTTTGGATCTAAGTCAATAATGGACACAGATATCACTTaGATCAGTAGCATCCTAAAA +
Preference number: 5 (lower is better)
Translates to: ILCLFRHERGCFGSKSIMDTDIT*ISSILK
Trigger: TTTTAGGATGCTACTGATCAAAGTGATATCTGTGTC...CATTATTGACTTAGATCCAAAACAGCCTCTCTCATGTCTAAAAAGGCACAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
ENST00000454925.1
ENST00000535861.5
ENST00000539731.5
CDS TCA 72 bp CTCCTGGGTAGGACTGCCAGTGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTCCCGGGGAGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LLGRTASALLGR*QDVGVLPGSCP
Trigger: AGGACAGCTCCCCGGGAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGCAGTCCTACCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324823.10
ENST00000426821.6
ENST00000449285.6
CDS GCA 72 bp CATGCCTTCCACGTCTGGGGCCACCAGGCGGAGTCCTaGCCTGGGTGTCAGGATCTGCAGGCGGACAATTTC +
Preference number: 6 (lower is better)
Translates to: HAFHVWGHQAES*PGCQDLQADNF
Trigger: GAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS CCA 72 bp CTTCCACGTCTGGGGCCACCAGGCGGAGTCCTGCCCTaGGTGTCAGGATCTGCAGGCGGACAATTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: LPRLGPPGGVLP*VSGSAGGQFPH
Trigger: GTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324823.10
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS TCA 72 bp TGTCTCCTGGGTAGGACCAGTGCTCTTCTTGGCCGCTaGCAGGACGTAGGAGTGCTCCCGGGGAGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: CLLGRTSALLGR*QDVGVLPGSCP
Trigger: AGGACAGCTCCCCGGGAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTCCTACCCAGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 72 bp GGAGCTCTCTGGAGCAGGGGGCCTCCTTGTCTTTGTTaGCTGGGGAAGACCTCATGCCTTCCACGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: GALWSRGPPCLC*LGKTSCLPRLG
Trigger: CCCCAGACGTGGAAGGCATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTCCAGAGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS CCA 72 bp GGAGTCCCGTTGGCCTTGGGGAACTGCTGCTGGGGCTaGGAAGAGCTGTCTATGGGCTTGGTGAACACTCCC +
Preference number: 6 (lower is better)
Translates to: GVPLALGNCCWG*EELSMGLVNTP
Trigger: GGGAGTGTTCACCAAGCCCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 90 bp TCACCAGCCAAGTCCCTCTGGAGCTCTCTGGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAAGACCTCATGCCTTCCACGTCTGGG +
Preference number: 6 (lower is better)
Translates to: SPAKSLWSSLEQGAS*SLLPGEDLMPSTSG
Trigger: CCCAGACGTGGAAGGCATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS TCA 72 bp CACCACCTCCTCCTCCTCCTCCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGATATTGTAGGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: HHLLLLLLLGVP*CRAAPDIVGCL
Trigger: CAGGCACCCTACAATATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAGGAGGAGGAGGAGGAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS TCA 72 bp CACCACCTCCTCCTCCTCCTCCTCCTCGGTGTCCCCTaGTGTAGAGCTGCGCCTGATATTGTAGGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: HHLLLLLLLGVP*CRAAPDIVGCQ
Trigger: CTGGCACCCTACAATATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAGGAGGAGGAGGAGGAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 72 bp TGGCACTGGAGCTTGCAGCATCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCAAGTCCCTCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: WHWSLQHLCWGP*KPPHQPSPSGA
Trigger: AGCTCCAGAGGGACTTGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAGCTCCAGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447792.2
CDS CCA 72 bp TGTCTACTGCAGCCAAGCCTTCAGGCCGGGAGCCCGTaGCTCCGGATCCCACATTGCCATCACTCAACTGTG +
Preference number: 6 (lower is better)
Translates to: CLLQPSLQAGSP*LRIPHCHHSTV
Trigger: CACAGTTGAGTGATGGCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAGGCTTGGCTGCAGTAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 72 bp CCTTCAGGCCGGGAGCCCGTGGCTCCGGATCCCACATaGCCATCACTCAACTGTGCACTTGACCTTGCAGCA +
Preference number: 6 (lower is better)
Translates to: PSGREPVAPDPT*PSLNCALDLAA
Trigger: TGCTGCAAGGTCAAGTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 90 bp GCAGCCAAGCCTTCAGGCCGGGAGCCCGTGGCTCCGGATCCCACATaGCCATCACTCAACTGTGCACTTGACCTTGCAGCATCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: AAKPSGREPVAPDPT*PSLNCALDLAASVL
Trigger: CAACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAGGCTTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 72 bp AGCTGCCTGGGAGCCTTTCCTCTTTGCTTTTGGCCCTaGCAGACACCCGGAACTGCGCCACTCAGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: SCLGAFPLCFWP*QTPGTAPLRAA
Trigger: AGCTGCTCTGAGTGGCGCAGTTCCGGGTGTCTGTCAGGGCCAAAAGCAAAGAGGAAAGGCTCCCAGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS TCA 72 bp GTGCACTTGACCTTGCAGCATCTGTGTTGGGGGCCCTaGAAGCCTCCTCACCAGCCAAGTCCCTCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: VHLTLQHLCWGP*KPPHQPSPSGA
Trigger: AGCTCCAGAGGGACTTGGCTGGTGAGGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAGGTCAAGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 72 bp GCCACCAGGCGGAGTCCTGCCCTGGGTGTCAGGATCTaGAGGCGGACAATTTCCTCACCTCTTGAGCTGTTT +
Preference number: 6 (lower is better)
Translates to: ATRRSPALGVRI*RRTISSPLELF
Trigger: AAACAGCTCAAGAGGTGAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS GCA 72 bp CTTCAGGCCGGGAGCCCGTGGCTCCGGATCCCACATTaGCATCACTCAACTGTGCACTTGACCTTGCAGCAT +
Preference number: 6 (lower is better)
Translates to: LQAGSPWLRIPH*HHSTVHLTLQH
Trigger: ATGCTGCAAGGTCAAGTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 72 bp GGGGCTAGGCATACTTGGCAGGCACTCGATCCAAATTaGCCGAGACGCTTTGGTCCTGCCTCCATCCGCACT +
Preference number: 6 (lower is better)
Translates to: GARHTWQALDPN*PRRFGPASIRT
Trigger: AGTGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000447792.2
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 72 bp TCCACCCTCTTCGCGATAAACGGTGCCTGTGTCTCCTaGGTAGGACTGCCAGTGCTCTTCTTGGCCGCTGAC +
Preference number: 6 (lower is better)
Translates to: STLFAINGACVS*VGLPVLFLAAD
Trigger: GTCAGCGGCCAAGAAGAGCACTGGCAGTCCTACCCAGGAGACACAGGCACCGTTTATCGCGAAGAGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324823.10
ENST00000426821.6
ENST00000449285.6
CDS CCA 72 bp TGGTCCTGCCTCCATCCGCACTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTGGGTCCTGGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: WSCLHPHCLSQE*ILPEQVGPGSS
Trigger: AGAAGAGCCAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAGGCAGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000447792.2
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 72 bp AAGTCCCTCTGGAGCTCTCTGGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAAGACCTCATGCCTTCC +
Preference number: 6 (lower is better)
Translates to: KSLWSSLEQGAS*SLLPGEDLMPS
Trigger: GGAAGGCATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000449285.6
ENST00000535861.5
CDS CAA 90 bp GCCCCCTTTGGGTCTGCCTTTGCATCCTCCTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGGACAGCAGAGACTGAAGTGGCACTG +
Preference number: 6 (lower is better)
Translates to: APFGSAFASSWAAVL*LFLSAGTAETEVAL
Trigger: CAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000324823.10
ENST00000370268.8
ENST00000370270.6
ENST00000426821.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 90 bp GAAGGTTCCATGTGTCTACCTGCAGGCTCCCTCCTGCCTCCAGATTaGGCCACACAGCCCAGTGGACACATGAGAGGTGGACCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: EGSMCLPAGSLLPPD*ATQPSGHMRGGPGA
Trigger: AGCTCCTGGTCCACCTCTCATGTGTCCACTGGGCTGTGTGGCCAAATCTGGAGGCAGGAGGGAGCCTGCAGGTAGACACATGGAACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS CAA 90 bp TCCCCCTTCAGCGTGGTTCGCACTTTCATCTGCTTGAGAACGTTATaGCGCTCCTCCTCGCCTGGTGGCAGAGGCTTCCCTTTGGTGCGG +
Preference number: 6 (lower is better)
Translates to: SPFSVVRTFICLRTL*RSSSPGGRGFPLVR
Trigger: CCGCACCAAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 90 bp CGGCCTGAGGGCAGCTCTATGGTGCGACCCTCCGATTCATCCTGCTaGGTAATCCAGCTCTTGTCCCCCTTCAGCGTGGTTCGCACTTTC +
Preference number: 6 (lower is better)
Translates to: RPEGSSMVRPSDSSC*VIQLLSPFSVVRTF
Trigger: GAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCTCAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 90 bp ACGCCCTTTGGGTCTGCCTTTGCATCCTCCTGGGCTGCTGTGCTGTaGCTCTTCCTATCAGCAGGGACAGCAGAGACTGAAGTGGCACTG +
Preference number: 6 (lower is better)
Translates to: TPFGSAFASSWAAVL*LFLSAGTAETEVAL
Trigger: CAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447792.2
CDS TCA 72 bp TGGCAGAGGCTTCCCTTTGGTGCGGCCTCCAAGAGCTaGGATACTCATGGTGATTGCTCCGCAGCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: WQRLPFGAASKS*DTHGDCSAALL
Trigger: GAGGAGAGCTGCGGAGCAATCACCATGAGTATCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 72 bp TCCTCTTTGCTTTTGGCCCTGACAGACACCCGGAACTaGGCCACTCAGAGCAGCTGTGTAGGCAAACCCCAC +
Preference number: 6 (lower is better)
Translates to: SSLLLALTDTRN*ATQSSCVGKPH
Trigger: GTGGGGTTTGCCTACACAGCTGCTCTGAGTGGCGCAGTTCCGGGTGTCTGTCAGGGCCAAAAGCAAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS GCA 72 bp CTCTTCCACCACCTCCACCCTCTTCGCGATAAACGGTaGCTGTGTCTCCTGGGTAGGACTGCTCCGTTTCTG +
Preference number: 6 (lower is better)
Translates to: LFHHLHPLRDKR*LCLLGRTAPFL
Trigger: CAGAAACGGAGCAGTCCTACCCAGGAGACACAGGCACCGTTTATCGCGAAGAGGGTGGAGGTGGTGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS GCA 72 bp GAGGGCAGCTCTATGGTGCGACCCTCCGATTCATCCTaGTTGGTAATCCAGCTCTTGTCCCCCTTCAGCGTG +
Preference number: 6 (lower is better)
Translates to: EGSSMVRPSDSS*LVIQLLSPFSV
Trigger: CACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGGTCGCACCATAGAGCTGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 72 bp GGCACTCGATCCAAATTGCCCGAGACGCTTTGGTCCTaGCTCCATCCGCACTGTTTGAGCCAGGAGTGGATC +
Preference number: 6 (lower is better)
Translates to: GTRSKLPETLWS*LHPHCLSQEWI
Trigger: GATCCACTCCTGGCTCAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000447792.2
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 72 bp CCCAGTGGACACATGAGAGGTGGACCAGGAGCTGCCTaGGAGCCTTTCCTCTTTGCTTTTGGCCCTGACAGA +
Preference number: 6 (lower is better)
Translates to: PSGHMRGGPGAA*EPFLFAFGPDR
Trigger: TCTGTCAGGGCCAAAAGCAAAGAGGAAAGGCTCCCAGGCAGCTCCTGGTCCACCTCTCATGTGTCCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS CAA 72 bp AAGTCCCTCTGGAGCTCTCTGGAGCAGGGGGCCTCCTaGTCTTTGTTGCCTGGGGAAGACCTGTTTGAGCCA +
Preference number: 6 (lower is better)
Translates to: KSLWSSLEQGAS*SLLPGEDLFEP
Trigger: TGGCTCAAACAGGTCTTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS CAA 90 bp ATCCAGCTCTTGTCCCCCTTCAGCGTGGTTCGCACTTTCATCTGCTaGAGAACGTTATTGCGCTCCTCCTCGCCTGGTGGCAGAGGCTTC +
Preference number: 6 (lower is better)
Translates to: IQLLSPFSVVRTFIC*RTLLRSSSPGGRGF
Trigger: GAAGCCTCTGCCACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 72 bp GCTGTTGCTCTTCCTATCAGCAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTCATGCCTTCCACGTCTGG +
Preference number: 6 (lower is better)
Translates to: AVALPISRDSRD*SGTGAHAFHVW
Trigger: CCAGACGTGGAAGGCATGAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS TCA 72 bp TGTCTCCTGGGTAGGACTGCTCCGTTTCTGTTCATCTaGGGAGAATGGCACCACCTCCTCCTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: CLLGRTAPFLFI*GEWHHLLLLLL
Trigger: GAGGAGGAGGAGGAGGAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGGAGCAGTCCTACCCAGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS TCA 72 bp GCTGTTGCTCTTCCTATCAGCAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTTCCTCTCTCGGAGCCGAT +
Preference number: 6 (lower is better)
Translates to: AVALPISRDSRD*SGTGASSLGAD
Trigger: ATCGGCTCCGAGAGAGGAAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000370268.8
ENST00000426821.6
ENST00000449285.6
CDS TCA 72 bp TGTCCCCCTTCAGCGTGGTTCGCACTTTCATCTGCTTaGGAACGTTATTGCGCTCCTCCTCGCCTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: CPPSAWFALSSA*ERYCAPPRLVA
Trigger: TGCCACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS GCA 72 bp CTCTTCCACCACCTCCACCCTCTTCGCGATAAACGGTaGCTGTGTCTCCTGGGTAGGACCAGTGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LFHHLHPLRDKR*LCLLGRTSALL
Trigger: AAGAAGAGCACTGGTCCTACCCAGGAGACACAGGCACCGTTTATCGCGAAGAGGGTGGAGGTGGTGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 72 bp CTTTGTTGCCTGGGGAAGACCTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTGGGTCCTGGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LCCLGKTCLSQE*ILPEQVGPGSS
Trigger: AGAAGAGCCAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGGTCTTCCCCAGGCAACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318504.11
ENST00000318529.12
ENST00000426821.6
CDS CAA 72 bp GGCAGCTCTATGGTGCGACCCTCCGATTCATCCTGCTaGGTAATCCAGCTCTTGTCCCCCTTCAGCGTGGTT +
Preference number: 6 (lower is better)
Translates to: GSSMVRPSDSSC*VIQLLSPFSVV
Trigger: AACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGGTCGCACCATAGAGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CAA 90 bp CTAGGCATACTTGGCAGGCACTCGATCCAAATTGCCCGAGACGCTTaGGTCCTGCCTCCATCCGCACTGTTTGAGCCAGGAGTGGATCTT +
Preference number: 6 (lower is better)
Translates to: LGILGRHSIQIARDA*VLPPSALFEPGVDL
Trigger: AAGATCCACTCCTGGCTCAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTCGGGCAATTTGGATCGAGTGCCTGCCAAGTATGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000447792.2
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS TCA 72 bp GCTGTTGCTCTTCCTATCAGCAGGGACAGCAGAGACTaGAGTGGCACTGGAGCTTGCAGCATCTGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: AVALPISRDSRD*SGTGACSICVG
Trigger: CCCAACACAGATGCTGCAAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447792.2
CDS GCA 72 bp CTCTTGTCCCCCTTCAGCGTGGTTCGCACTTTCATCTaGTTGAGAACGTTATTGCGCTCCTCCTCGCCTGGT +
Preference number: 6 (lower is better)
Translates to: LLSPFSVVRTFI*LRTLLRSSSPG
Trigger: ACCAGGCGAGGAGGAGCGCAATAACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 72 bp TCCACCCTCTTCGCGATAAACGGTGCCTGTGTCTCCTaGGTAGGACTGCTCCGTTTCTGTTCATCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: STLFAINGACVS*VGLLRFCSSEE
Trigger: CTCCTCAGATGAACAGAAACGGAGCAGTCCTACCCAGGAGACACAGGCACCGTTTATCGCGAAGAGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318529.12
CDS CAA 72 bp CGACCCTCCGATTCATCCTGCTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTTCGCACTTTCATCTGC +
Preference number: 6 (lower is better)
Translates to: RPSDSSCLVIQL*SPFSVVRTFIC
Trigger: GCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5
CDS CCA 72 bp CAATTTCCTCACCTCTTGAGCTGTTTGAGCCAGGAGTaGATCTTGCCAGAGCAGGTGGGTCCTGGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: QFPHLLSCLSQE*ILPEQVGPGSS
Trigger: AGAAGAGCCAGGACCCACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGCTCAAGAGGTGAGGAAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324823.10
CDS CAA 90 bp TCTATGGTGCGACCCTCCGATTCATCCTGCTTGGTAATCCAGCTCTaGTCCCCCTTCAGCGTGGTTCGCACTTTCATCTGCTTGAGAACG +
Preference number: 6 (lower is better)
Translates to: SMVRPSDSSCLVIQL*SPFSVVRTFICLRT
Trigger: CGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGAATCGGAGGGTCGCACCATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318504.11
ENST00000370268.8
ENST00000370270.6
ENST00000436731.6
ENST00000449285.6
ENST00000535861.5
ENST00000539731.5