Pregenerated sensors for ZNF181 (Homo sapiens)
Ensembl gene IDs: ENSG00000197841Ensembl transcript IDs: ENST00000448715.2, ENST00000492450.3, ENST00000599244.5
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGCTGGGAGTACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATTATGCCTCTGTGCTTTaGCTTTCTGTTAAGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: VLGVQTLATTSGPSLIINYASVL*LSVKVA Trigger: TGCTACCTTAACAGAAAGCCAAAGCACAGAGGCATA...ATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGTACTCCCAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGGAGTACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATATGGTTATCAAAATGTaGTTTCTGGACAGTGTGTCG | + |
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Preference number: 2 (lower is better) Translates to: VLGVQTLATTSGPSLIINMVIKM*FLDSVS Trigger: CGACACACTGTCCAGAAAGCACATTTTGATAACCAT...ATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGTACTCCCAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR GCA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTCAGACTAATGAGTTTTaGTATATTGCCCAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTQTNEF*YIAQAG Trigger: ACCAGCCTGGGCAATATAGCAAAACTCATTAGTCTG...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR CCA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTAAAGCTCAGAACTACTaGATTCCTATATCCCATCGC | + |
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Preference number: 2 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTKAQNY*IPISHR Trigger: GCGATGGGATATAGGAATCCAGTAGTTCTGAGCTTT...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGACTTTGACACACCACTAAAGCTCAGAACTACTGGATTCCTATATCCCATCATAAACAAACTGGCCTaGATCTTTGCTAAAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: TDFDTPLKLRTTGFLYPIINKLA*IFAKRS Trigger: AGACCTTTTAGCAAAGATGCAGGCCAGTTTGTTTAT...GATGGGATATAGGAATCCAGTAGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR GCA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTCAGTCTATCCATACTTaGAACTGTCTGATACCACAT | + |
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Preference number: 2 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTQSIHT*NCLIPH Trigger: ATGTGGTATCAGACAGTTGCAAGTATGGATAGACTG...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATCTTCCAAAGATTCAAAATGTGCTTTCTaGACAGTGTGTCGCCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: TDISHYIWPFPNYKSSKDSKCAF*TVCRLR Trigger: TCTTAGGCGACACACTGTCCAGAAAGCACATTTTGA...ATCTTTGGAAGATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR TCA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTCTTACTACTCTCACCTaGGATAAAGAACAAAATCTG | + |
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Preference number: 2 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTLTTLT*DKEQNL Trigger: CAGATTTTGTTCTTTATCTCAGGTGAGAGTAGTAAG...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR GCA 90 bp | CAAATTAGTGCTTTCAAAATTGGTAGGTGGGCTGTAAAAGTAATGAGAACACTTAGACTTAGCAATCTGTaGTTTAACAAGCCCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: QISAFKIGRWAVKVMRTLRLSNL*FNKPSY Trigger: GTAGGAGGGCTTGTTAAAGCACAGATTGCTAAGTCT...AAGTGTTCTCATTACTTTTACAGCCCACCTACCAATTTTGAAAGCACTAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR TCA 72 bp | TCCTGTACTCAAGCAATCCCTCCCCACTCAGCCTCCTaGATAGCTAGGACTGCAGATGTGTGCCTACACCTG | + |
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Preference number: 3 (lower is better) Translates to: SCTQAIPPHSAS*IARTADVCLHL Trigger: CAGGTGTAGGCACACATCTGCAGTCCTAGCTATTCAGGAGGCTGAGTGGGGAGGGATTGCTTGAGTACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR CAA 90 bp | CAAATTAGTGCTTTCAAAATTGGTAGGTGGGCTGTAAAAGTAATGAGAACACTTTGCTATCCATCTTTCTaGTCAGATAACATCCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: QISAFKIGRWAVKVMRTLCYPSF*SDNIPA Trigger: CGCAGGGATGTTATCTGACAAGAAAGATGGATAGCA...AAGTGTTCTCATTACTTTTACAGCCCACCTACCAATTTTGAAAGCACTAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR-3UTR CAA 90 bp | CAAATTAGTGCTTTCAAAATTGGTAGGTGGGCTGTAAAAGTAATGAGAACACTTAACTGGCCTGCATCTTaGCTAAAAGGTCTTCCTATA | + |
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Preference number: 3 (lower is better) Translates to: QISAFKIGRWAVKVMRTLNWPAS*LKGLPI Trigger: TATAGGAAGACCTTTTAGCAAAGATGCAGGCCAGTT...AAGTGTTCTCATTACTTTTACAGCCCACCTACCAATTTTGAAAGCACTAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR CCA 72 bp | TGTTCATTATTACAATGGTTATCAAAATGTGCTTTCTaGACAGTGTGTCGCCTAAGAACGCATGAAAAATGC | + |
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Preference number: 3 (lower is better) Translates to: CSLLQWLSKCAF*TVCRLRTHEKC Trigger: GCATTTTTCATGCGTTCTTAGGCGACACACTGTCCAGAAAGCACATTTTGATAACCATTGTAATAATGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| 3UTR GCA 72 bp | GTCTATCCATACTTGCAACTGTCTGATACCACATCATaGTTCCTTAATTGTATTTATTTACTTTGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: VYPYLQLSDTTS*FLNCIYLLWRQ Trigger: CTGTCTCCAAAGTAAATAAATACAATTAAGGAAGCATGATGTGGTATCAGACAGTTGCAAGTATGGATAGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CCA 90 bp | TGTGCTTTAACAAGCCCTCCTACTGACTTTGACACACCACTAAAGCTCAGAACTAATCGTCCCGGAGCCTaGGAGTCGCCGTCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CALTSPPTDFDTPLKLRTNRPGA*ESPSGL Trigger: CAGGCCTGACGGCGACTCCCAGGCTCCGGGACGATT...AGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGTAGGAGGGCTTGTTAAAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGAGTACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATCCCCACTCAGCCTCCTaGATAGCTAGGACTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VLGVQTLATTSGPSLIINPHSAS*IARTAD Trigger: ATCTGCAGTCCTAGCTATTCAGGAGGCTGAGTGGGG...ATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGTACTCCCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR GCA 90 bp | ACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATCTTCCAAAGATCTCTGGGGACGACACTaGCCAGAATCGTCCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TDISHYIWPFPNYKSSKDLWGRH*PESSRS Trigger: GCTCCGGGACGATTCTGGGCAGTGTCGTCCCCAGAG...ATCTTTGGAAGATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR GCA 90 bp | GTGACCTTAAAACTCCTGTACTCAAGCAATCCCTCCCCACTCAGCCTCCTGAATCCTGAGGCATTACTCTaGAATTTCCAACAGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: VTLKLLYSSNPSPLSLLNPEALL*NFQQPT Trigger: TGTTGGCTGTTGGAAATTGCAGAGTAATGCCTCAGG...ATTCAGGAGGCTGAGTGGGGAGGGATTGCTTGAGTACAGGAGTTTTAAGGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR TCA 90 bp | GTGACCTTAAAACTCCTGTACTCAAGCAATCCCTCCCCACTCAGCCTCCTGAATATACTTGCAACTGTCTaGTACCACATCATGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTLKLLYSSNPSPLSLLNILATV*YHIMLP Trigger: AGGAAGCATGATGTGGTATCAGACAGTTGCAAGTAT...ATTCAGGAGGCTGAGTGGGGAGGGATTGCTTGAGTACAGGAGTTTTAAGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CCA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTACTTTGGAGACAGGGTaGTGTTCTGCTGTCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTTLETG*CSAVQA Trigger: AGCCTGGACAGCAGAACACCACCCTGTCTCCAAAGT...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR TCA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTTTACATAGGAGGACATaGAGGCCAGGAAAACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTLHRRT*RPGKPR Trigger: CCTTGGTTTTCCTGGCCTTCATGTCCTCCTATGTAA...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CCA 90 bp | ACTGACTTTGACACACCACTAAAGCTCAGAACTACTGGATTCCTATATCCCATCAGAGGTGAGAATTGCTaGTCTGAAATGGTCTACCTG | + |
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Preference number: 4 (lower is better) Translates to: TDFDTPLKLRTTGFLYPIRGENC*SEMVYL Trigger: CAGGTAGACCATTTCAGACCAGCAATTCTCACCTCT...GATGGGATATAGGAATCCAGTAGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CCA 90 bp | CAAATTAGTGCTTTCAAAATTGGTAGGTGGGCTGTAAAAGTAATGAGAACACTTAAAGACAACTGTGGCTaGCGTCTAACCACGCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QISAFKIGRWAVKVMRTLKDNCG*RLTTRP Trigger: TGGGCGCGTGGTTAGACGCCAGCCACAGTTGTCTTT...AAGTGTTCTCATTACTTTTACAGCCCACCTACCAATTTTGAAAGCACTAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR GCA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTCCACTATGCACGGTGTaGGTTCACATTTTTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTPLCTV*VHIFPD Trigger: ATCTGGAAAAATGTGAACGCACACCGTGCATAGTGG...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR GCA 90 bp | ACTGACTTTGACACACCACTAAAGCTCAGAACTACTGGATTCCTATATCCCATCCAGACTAATGAGTTTTaGTATATTGCCCAGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TDFDTPLKLRTTGFLYPIQTNEF*YIAQAG Trigger: ACCAGCCTGGGCAATATAGCAAAACTCATTAGTCTG...GATGGGATATAGGAATCCAGTAGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CCA 90 bp | ACTGACTTTGACACACCACTAAAGCTCAGAACTACTGGATTCCTATATCCCATCAAAGCTCAGAACTACTaGATTCCTATATCCCATCGC | + |
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Preference number: 4 (lower is better) Translates to: TDFDTPLKLRTTGFLYPIKAQNY*IPISHR Trigger: GCGATGGGATATAGGAATCCAGTAGTTCTGAGCTTT...GATGGGATATAGGAATCCAGTAGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CCA 90 bp | ACTGACTTTGACACACCACTAAAGCTCAGAACTACTGGATTCCTATATCCCATCTCAAAATGTGCTTTCTaGACAGTGTGTCGCCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: TDFDTPLKLRTTGFLYPISKCAF*TVCRLR Trigger: TCTTAGGCGACACACTGTCCAGAAAGCACATTTTGA...GATGGGATATAGGAATCCAGTAGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR GCA 90 bp | TGTGCTTTAACAAGCCCTCCTACTGACTTTGACACACCACTAAAGCTCAGAACTATAAACAAACTGGCCTaGATCTTTGCTAAAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CALTSPPTDFDTPLKLRTINKLA*IFAKRS Trigger: AGACCTTTTAGCAAAGATGCAGGCCAGTTTGTTTAT...AGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGTAGGAGGGCTTGTTAAAGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR GCA 90 bp | ACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATCTTCCAAAGATCAGTCTATCCATACTTaGAACTGTCTGATACCACAT | + |
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Preference number: 4 (lower is better) Translates to: TDISHYIWPFPNYKSSKDQSIHT*NCLIPH Trigger: ATGTGGTATCAGACAGTTGCAAGTATGGATAGACTG...ATCTTTGGAAGATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR TCA 90 bp | ACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATCTTCCAAAGATTCATTAAATGTCACCTaGGGCATTACTCTGCAATTT | + |
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Preference number: 4 (lower is better) Translates to: TDISHYIWPFPNYKSSKDSLNVT*GITLQF Trigger: AAATTGCAGAGTAATGCCTCAGGTGACATTTAATGA...ATCTTTGGAAGATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR TCA 90 bp | CAAATTAGTGCTTTCAAAATTGGTAGGTGGGCTGTAAAAGTAATGAGAACACTTCTTACTACTCTCACCTaGGATAAAGAACAAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: QISAFKIGRWAVKVMRTLLTTLT*DKEQNL Trigger: CAGATTTTGTTCTTTATCTCAGGTGAGAGTAGTAAG...AAGTGTTCTCATTACTTTTACAGCCCACCTACCAATTTTGAAAGCACTAATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS TCA 90 bp | ACACTGCCCAGAATCGTCCCGGAGCCTGGGAGTCGCCGTCAGGCCTaGGGCTACAGCGGGGCGGACCCAGTGCGCCGCCCACAGCCGATC | + |
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Preference number: 5 (lower is better) Translates to: TLPRIVPEPGSRRQA*GYSGADPVRRPQPI Trigger: GATCGGCTGTGGGCGGCGCACTGGGTCCGCCCCGCTGTAGCCTCAGGCCTGACGGCGACTCCCAGGCTCCGGGACGATTCTGGGCAGTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448715.2 ENST00000599244.5 |
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| CDS-3UTR CAA 90 bp | TGTGCTTTAACAAGCCCTCCTACTGACTTTGACACACCACTAAAGCTCAGAACTTGCTATCCATCTTTCTaGTCAGATAACATCCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: CALTSPPTDFDTPLKLRTCYPSF*SDNIPA Trigger: CGCAGGGATGTTATCTGACAAGAAAGATGGATAGCA...AGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGTAGGAGGGCTTGTTAAAGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CAA 90 bp | ACTGACTTTGACACACCACTAAAGCTCAGAACTACTGGATTCCTATATCCCATCCCAGTCTATCCATACTaGCAACTGTCTGATACCACA | + |
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Preference number: 5 (lower is better) Translates to: TDFDTPLKLRTTGFLYPIPVYPY*QLSDTT Trigger: TGTGGTATCAGACAGTTGCAAGTATGGATAGACTGG...GATGGGATATAGGAATCCAGTAGTTCTGAGCTTTAGTGGTGTGTCAAAGTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CAA 90 bp | GTCACACAAAGCCAGTATTCATGCAACTTGGATTTAAACCCAGGTAACATGACTAACTGGCCTGCATCTTaGCTAAAAGGTCTTCCTATA | + |
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Preference number: 5 (lower is better) Translates to: VTQSQYSCNLDLNPGNMTNWPAS*LKGLPI Trigger: TATAGGAAGACCTTTTAGCAAAGATGCAGGCCAGTT...AGTCATGTTACCTGGGTTTAAATCCAAGTTGCATGAATACTGGCTTTGTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGAGTACAGACATTAGCCACTACATCTGGCCCTTCCCTAATTATAAATTTGTATTTATTTACTTaGGAGACAGGGTGGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: VLGVQTLATTSGPSLIINLYLFT*ETGWCS Trigger: AGAACACCACCCTGTCTCCAAAGTAAATAAATACAA...ATTTATAATTAGGGAAGGGCCAGATGTAGTGGCTAATGTCTGTACTCCCAGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492450.3 |
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| CDS TCA 72 bp | AGAATCGTCCCGGAGCCTGGGAGTCGCCGTCAGGCCTaGGGCTACAGCGGGGCGGACCCAGTGCGCCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RIVPEPGSRRQA*GYSGADPVRRP Trigger: TGGGCGGCGCACTGGGTCCGCCCCGCTGTAGCCTCAGGCCTGACGGCGACTCCCAGGCTCCGGGACGATTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448715.2 ENST00000599244.5 |
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| CDS GCA 72 bp | GAGCGGGCAACGGCCGCCGACCTCTGGGGACGACACTaGCCAGAATCGTCCCGGAGCCTGGGAGTCGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: ERATAADLWGRH*PESSRSLGVAV Trigger: GACGGCGACTCCCAGGCTCCGGGACGATTCTGGGCAGTGTCGTCCCCAGAGGTCGGCGGCCGTTGCCCGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000448715.2 ENST00000492450.3 ENST00000599244.5 |
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