RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF175 (Homo sapiens)

Ensembl gene IDs: ENSG00000105497

Ensembl transcript IDs: ENST00000262259.7, ENST00000436511.2, ENST00000545217.5, ENST00000596504.1, ENST00000600460.1

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTaGAGCCTTTCCACCCCACACCAGTCATCTACGGCCGGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: PGAHYFHPSPPWRGL*SLSTPHQSSTAGQP
Trigger: GGGCTGGCCGGCCGTAGATGACTGGTGTGGGGTGGAAAGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 90 bp AAAGCCAACAGGCCCCGGAAGTGGCACGAGGTCAGAGGTGTGGGATaGCCAGGGAACGAGCAGCTTTCTGGAAGTGGGGAGGAAGGGCTT +
Preference number: 1 (lower is better)
Translates to: KANRPRKWHEVRGVG*PGNEQLSGSGEEGL
Trigger: AAGCCCTTCCTCCCCACTTCCAGAAAGCTGCTCGTTCCCTGGCCATCCCACACCTCTGACCTCGTGCCACTTCCGGGGCCTGTTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 90 bp GGGACATGGTCACTGATACTACGCCCCTGGACAGGGAGAGGCCAGTaGGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCC +
Preference number: 1 (lower is better)
Translates to: GTWSLILRPWTGRGQ*DTEQICSPGPSTGS
Trigger: GGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTATCAGTGACCATGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 90 bp TTTCCACCCCACACCAGTCATCTACGGCCGGCCAGCCCTTGTACCTaGACTCCCCAGGTGAGACTCTTCCACCTTTCTCAGGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: FPPHTSHLRPASPCT*TPQVRLFHLSQEVG
Trigger: TCCCACCTCCTGAGAAAGGTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATGACTGGTGTGGGGTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 90 bp CACTCCCAGGACCCAGGTGCACACTATTTCCACCCCTCACCACCATaGAGAGGCCTCTGCAGCCTTTCCACCCCACACCAGTCATCTACG +
Preference number: 1 (lower is better)
Translates to: HSQDPGAHYFHPSPP*RGLCSLSTPHQSST
Trigger: CGTAGATGACTGGTGTGGGGTGGAAAGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGGTCCTGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 90 bp AGCACAGGCTCCTGCATGTGCAGTCACCTTGTTTTAGACACAGCCTaGGGTCTGTGCTGGTTCCTGACCAGCTGTGTGGGCCCCTATCAA +
Preference number: 1 (lower is better)
Translates to: STGSCMCSHLVLDTA*GLCWFLTSCVGPYQ
Trigger: TTGATAGGGGCCCACACAGCTGGTCAGGAACCAGCACAGACCTCAGGCTGTGTCTAAAACAAGGTGACTGCACATGCAGGAGCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 90 bp ACCCAACCAAACTCCAGATTCCTCCGTCTATTATCCCACAGGCATTaGGTACAGACTGGCTTGTCCCAGCGCTTGGTACTGAGAGGAAAG +
Preference number: 1 (lower is better)
Translates to: TQPNSRFLRLLSHRH*VQTGLSQRLVLRGK
Trigger: CTTTCCTCTCAGTACCAAGCGCTGGGACAAGCCAGTCTGTACTCAATGCCTGTGGGATAATAGACGGAGGAATCTGGAGTTTGGTTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 90 bp GGCTCCAGAGCCCATGAGCCTAACTACTACTGTGCCCAACCTTTGTaGCAATCGCCACAACAGTCAAAGGATGGATCAAGTACTGGTTTT +
Preference number: 1 (lower is better)
Translates to: GSRAHEPNYYCAQPL*QSPQQSKDGSSTGF
Trigger: AAAACCAGTACTTGATCCATCCTTTGACTGTTGTGGCGATTGGCACAAAGGTTGGGCACAGTAGTAGTTAGGCTCATGGGCTCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 90 bp CATCACATGACAGTAGGACATTCTTCATTTCACCATGGCTTTCACTaGCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGG +
Preference number: 1 (lower is better)
Translates to: HHMTVGHSSFHHGFH*PTIKRSWALWEAEG
Trigger: CCCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAATGAAGAATGTCCTACTGTCATGTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 90 bp AGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATaGAGTTCCAAGGGTTTAACACACACACACTTCTCACACCAAATG +
Preference number: 1 (lower is better)
Translates to: RDTRPAKIHQHLVCP*SSKGLTHTHFSHQM
Trigger: CATTTGGTGTGAGAAGTGTGTGTGTGTTAAACCCTTGGAACTGCATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 90 bp TTTCTGATCACATCACATGACAGTAGGACATTCTTCATTTCACCATaGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGA +
Preference number: 1 (lower is better)
Translates to: FLITSHDSRTFFISP*LSLPNNKKVMGTLG
Trigger: TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAATGAAGAATGTCCTACTGTCATGTGATGTGATCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 90 bp AGCATTTGTGTTGTACTCATGGTGGACAGCCACCATTCTAATGCTTaGCTTTACATAATTAACGCATGTAATCTGCAAAGGAGCCACAAG +
Preference number: 1 (lower is better)
Translates to: SICVVLMVDSHHSNA*LYIINACNLQRSHK
Trigger: CTTGTGGCTCCTTTGCAGATTACATGCGTTAATTATGTAAAGTCAAGCATTAGAATGGTGGCTGTCCACCATGAGTACAACACAAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 90 bp TGCAGCCTTTCCACCCCACACCAGTCATCTACGGCCGGCCAGCCCTaGTACCTGGACTCCCCAGGTGAGACTCTTCCACCTTTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: CSLSTPHQSSTAGQP*YLDSPGETLPPFSG
Trigger: TCCTGAGAAAGGTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATGACTGGTGTGGGGTGGAAAGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 90 bp GAGCACTCTAGACAGAGGGGGTTGCGAGGTAGGGAGGAAACTAAGTaGTTAAAGCCAACAGGCCCCGGAAGTGGCACGAGGTCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: EHSRQRGLRGREETK*LKPTGPGSGTRSEV
Trigger: CACCTCTGACCTCGTGCCACTTCCGGGGCCTGTTGGCTTTAACAACTTAGTTTCCTCCCTACCTCGCAACCCCCTCTGTCTAGAGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCGAGCCAGGAATCAAATaGAGGAACCTGGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTEPGIK*RNLAPG
Trigger: CCCAGGAGCCAGGTTCCTGCATTTGATTCCTGGCTC...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTAACAGGCTCCTGCATGTaGAGTCACCTTGTTTTAGAC +
Preference number: 2 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLTGSCM*SHLVLD
Trigger: GTCTAAAACAAGGTGACTGCACATGCAGGAGCCTGT...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTAACCTTTCTCAGGAGGTaGGACATGGTCACTGATACT +
Preference number: 2 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLTFLRR*DMVTDT
Trigger: AGTATCAGTGACCATGTCCCACCTCCTGAGAAAGGT...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAAGCTTGGGGGCTATTTaGTCTCCGCCAAAACTACTC +
Preference number: 2 (lower is better)
Translates to: ETQNRFALQGPAQAPACASLGAI*SPPKLL
Trigger: GAGTAGTTTTGGCGGAGATCAAATAGCCCCCAAGCT...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCGTTTTAGACACAGCCTaGGGTCTGTGCTGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: YYAPGQGEASETQNRFALVLDTA*GLCWFL
Trigger: CAGGAACCAGCACAGACCTCAGGCTGTGTCTAAAAC...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACTCATGTGTTCACACATaGAGTGCATCCCTAGAGTTT +
Preference number: 2 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHSCVHT*SASLEF
Trigger: AAACTCTAGGGATGCACTGCATGTGTGAACACATGA...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCAGAAAAGACTTCCAGCTaGCAGAAATCTCCCACCACA +
Preference number: 2 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSEKTSS*QKSPTT
Trigger: TGTGGTGGGAGATTTCTGTCAGCTGGAAGTCTTTTC...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGACAGGGAGAGGCCAGTaGGACACAGAACAGATTTGC +
Preference number: 2 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGTGRGQ*DTEQIC
Trigger: GCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGT...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAAACCTTGAAGGGGTATaGAGACTAAAGCCATGGGTG +
Preference number: 2 (lower is better)
Translates to: ETQNRFALQGPAQAPACANLEGV*RLKPWV
Trigger: CACCCATGGCTTTAGTCTCCATACCCCTTCAAGGTT...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 90 bp CCAGGCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTaGGTCTGTCCATGCAGTTCCAAGGGTTTAACACACACACACTTC +
Preference number: 2 (lower is better)
Translates to: PGRLRDTRPAKIHQH*VCPCSSKGLTHTHF
Trigger: GAAGTGTGTGTGTGTTAAACCCTTGGAACTGCATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGTGCAGCAAACCCCACTaGACTGAGGGCATACATACA +
Preference number: 2 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGCSKPH*TEGIHT
Trigger: TGTATGTATGCCCTCAGTGCAGTGGGGTTTGCTGCA...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACCAGTTTGTTGACTCCTaGTGTAAAAATATGAACGAG +
Preference number: 2 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHQFVDS*CKNMNE
Trigger: CTCGTTCATATTTTTACACCAGGAGTCAACAAACTG...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGACTGCACTCCAGAGCCTaGGCGACAGAGCGAGACTCC +
Preference number: 2 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGLHSRA*ATERDS
Trigger: GGAGTCTCGCTCTGTCGCCCAGGCTCTGGAGTGCAG...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 90 bp AGGGAAAGCCCAGATCTGAGAAGGGAGGCACATCCTGAGGGGTCTTaGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTTTTAACACAC +
Preference number: 2 (lower is better)
Translates to: RESPDLRREAHPEGS*EPVCLHCGLKFLTH
Trigger: GTGTGTTAAAAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCCCTCAGGATGTGCCTCCCTTCTCAGATCTGGGCTTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 90 bp CACCCAACCAAACTCCAGATTCCTCCGTCTATTATCCCACAGGCATaGAGTACAGACTGGCTTGTCCCAGCGCTTGGTACTGAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: HPTKLQIPPSIIPQA*STDWLVPALGTERK
Trigger: TTTCCTCTCAGTACCAAGCGCTGGGACAAGCCAGTCTGTACTCAATGCCTGTGGGATAATAGACGGAGGAATCTGGAGTTTGGTTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 90 bp GTTGGCTCCAGAGCCCATGAGCCTAACTACTACTGTGCCCAACCTTaGTGCCAATCGCCACAACAGTCAAAGGATGGATCAAGTACTGGT +
Preference number: 2 (lower is better)
Translates to: VGSRAHEPNYYCAQP*CQSPQQSKDGSSTG
Trigger: ACCAGTACTTGATCCATCCTTTGACTGTTGTGGCGATTGGCACAAAGGTTGGGCACAGTAGTAGTTAGGCTCATGGGCTCTGGAGCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCAATCCAAAATGCTTCTaGTCCCAGGCATTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTNPKCF*SQAFWR
Trigger: TCTCCAAAATGCCTGGGATCAGAAGCATTTTGGATT...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTATACATACACATATGCTaGCCAGACCATATACATATG +
Preference number: 2 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLYIHIC*PDHIHM
Trigger: CATATGTATATGGTCTGGTCAGCATATGTGTATGTA...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGCAAACCCCACTGCACTaGGGGCATACATACATACAT +
Preference number: 2 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGQTPLH*GHTYIH
Trigger: ATGTATGTATGTATGCCCTCAGTGCAGTGGGGTTTG...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCTGCCACCTTCCTCCCTaGAACTGGTCAGGGTGCCAC +
Preference number: 2 (lower is better)
Translates to: KTLDSSLGPINSKANHPTCHLPP*NWSGCH
Trigger: GTGGCACCCTGACCAGTTTCAGGGAGGAAGGTGGCA...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCTGTTCACACATGCAGTaGATCCCTAGAGTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTCSHMQ*IPRVFL
Trigger: CAGAAAAACTCTAGGGATGCACTGCATGTGTGAACA...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGCTATGCAGTGAATTCTaGAGCAAACCCCACTGCACT +
Preference number: 2 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGLCSEF*SKPHCT
Trigger: AGTGCAGTGGGGTTTGCTGCAGAATTCACTGCATAG...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTAAAGATTATGCTGGTCTaGTTCTCGGAAGTATTGATA +
Preference number: 2 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLKIMLV*FSEVLI
Trigger: TATCAATACTTCCGAGAAGCAGACCAGCATAATCTT...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAAAATTCATCAGCACTTaGTCTGTCCATGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: ETQNRFALQGPAQAPACAKFIST*SVHAVP
Trigger: TGGAACTGCATGGACAGACCAAGTGCTGATGAATTT...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCGCCAGCCCTTGTACCTaGACTCCCCAGGTGAGACTC +
Preference number: 2 (lower is better)
Translates to: KTLDSSLGPINSKANHPTASPCT*TPQVRL
Trigger: GAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGC...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGACACCCCTCACCACCATaGAGAGGCCTCTGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGHPSPP*RGLCSL
Trigger: AAGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTG...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp CAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATGACTGGGGCTAAACATCAGCCTCTGTaGTCCTCGCTTGACAGGAGG +
Preference number: 2 (lower is better)
Translates to: QNQCLAGKSQLFHPMTGAKHQPL*SSLDRR
Trigger: CCTCCTGTCAAGCGAGGACCACAGAGGCTGATGTTT...AGCCCCAGTCATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR TCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGATTAGGGAGGCCCACGTaGGGAGTGAACATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGLGRPT*GVNMWL
Trigger: CAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAA...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCTCTGCTTACATCTCCTaGTATGCAGTGAATTCTGCA +
Preference number: 2 (lower is better)
Translates to: YYAPGQGEASETQNRFALSAYIS*YAVNSA
Trigger: TGCAGAATTCACTGCATAGCAGGAGATGTAAGCAGA...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTTCAAAACTGTGGGAATaGCTAAATAAATTATGGCAG +
Preference number: 2 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPSKLWE*LNKLWQ
Trigger: CTGCCATAATTTATTTAGCCATTCCCACAGTTTTGA...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCTGTGTGTGTATCATGTaGTGGCAAACATTTTCTGTA +
Preference number: 2 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTCVCIM*WQTFSV
Trigger: TACAGAAAATGTTTGCCAGCACATGATACACACACA...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp GGGTCTTTGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTTTTAACACACTTGCAGGAACCTGGCTCCTaGGCCTGTGCACTTAAAAGA +
Preference number: 2 (lower is better)
Translates to: GSLEPVCLHCGLKFLTHLQEPGS*ACALKR
Trigger: TCTTTTAAGTGCACAGGCCCAGGAGCCAGGTTCCTG...CAAGTGTGTTAAAAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp ATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTTGGTTCAAAGACCCAGTGGTaGATGAAGGAGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: MRTEEKRAKPHGPSKEFGSKTQW*MKEQNQ
Trigger: CTGGTTCTGCTCCTTCATCCACCACTGGGTCTTTGA...ACCAAATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR TCA 90 bp TATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTTGGAGCTTTTCCATCCTATaGCTGGGGCTTCTGATCAGA +
Preference number: 2 (lower is better)
Translates to: YENRGKTGQTPWTKQGIWSFSIL*LGLLIR
Trigger: TCTGATCAGAAGCCCCAGTCATAGGATGGAAAAGCT...CCAAATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR GCA 90 bp ATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTTGGTAAGGAGCAGAACCAGTaGTTAGCAGGAAAGAGTCAG +
Preference number: 2 (lower is better)
Translates to: MRTEEKRAKPHGPSKEFGKEQNQ*LAGKSQ
Trigger: CTGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTT...ACCAAATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR CCA 90 bp GGGTCTTTGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTTTTAACACACTTGGCAGAGGGTAGAGAGTaGAGCCAGGAATCAAATGCA +
Preference number: 2 (lower is better)
Translates to: GSLEPVCLHCGLKFLTHLAEGRE*SQESNA
Trigger: TGCATTTGATTCCTGGCTCCACTCTCTACCCTCTGC...CAAGTGTGTTAAAAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR GCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGAAAACTACTCAATTCTaGCAGTGCAGCACAAAAGAA +
Preference number: 2 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGKTTQF*QCSTKE
Trigger: TTCTTTTGTGCTGCACTGGCAGAATTGAGTAGTTTT...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATGTGTGTATCATGTGCTaGCAAACATTTTCTGTAAAG +
Preference number: 2 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHVCIMC*QTFSVK
Trigger: CTTTACAGAAAATGTTTGCCAGCACATGATACACAC...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp ATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTTGGTTTTTCAAAGACCCAGTaGTGGATGAAGGAGCAGAAC +
Preference number: 2 (lower is better)
Translates to: MRTEEKRAKPHGPSKEFGFSKTQ*WMKEQN
Trigger: GTTCTGCTCCTTCATCCACCACTGGGTCTTTGAAAA...ACCAAATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR GCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCACTCAATTCTGCCAGTaGAGCACAAAAGAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: KTLDSSLGPINSKANHPTTQFCQ*STKEAQ
Trigger: CTGGGCTTCTTTTGTGCTGCACTGGCAGAATTGAGT...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGCCATATTTGGCCAATaGCCACAGTTTGTTGACTCC +
Preference number: 2 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGAIFGQ*PQFVDS
Trigger: GGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CCA 90 bp TATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTTGGTTATCAGCCAGTTCATaGTTTCCTCTAGAACACAGA +
Preference number: 2 (lower is better)
Translates to: YENRGKTGQTPWTKQGIWLSASS*FPLEHR
Trigger: TCTGTGTTCTAGAGGAAACCATGAACTGGCTGATAA...CCAAATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR CCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCCTTAAAAGATTATGCTaGTCTGCTTCTCGGAAGTAT +
Preference number: 2 (lower is better)
Translates to: KTLDSSLGPINSKANHPTLKRLC*SASRKY
Trigger: ATACTTCCGAGAAGCAGACCAGCATAATCTTTTAAG...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR TCA 90 bp CCAAGAATTCTGATTTCTTGTTACCAAATCCTGACTATTTCTATCTGTGGGCAACACTCTACCTCCCTGTaGCTATTTAAATTACAAAGG +
Preference number: 2 (lower is better)
Translates to: PRILISCYQILTISICGQHSTSL*LFKLQR
Trigger: CCTTTGTAATTTAAATAGTCACAGGGAGGTAGAGTG...TTGCCCACAGATAGAAATAGTCAGGATTTGGTAACAAGAAATCAGAATTCTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR CCA 72 bp AGGCCCCGGAAGTGGCACGAGGTCAGAGGTGTGGGATaGCCAGGGAACGAGCAGCTTTCTGGAAGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: RPRKWHEVRGVG*PGNEQLSGSGE
Trigger: CTCCCCACTTCCAGAAAGCTGCTCGTTCCCTGGCCATCCCACACCTCTGACCTCGTGCCACTTCCGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 72 bp GACCCAGGTGCACACTATTTCCACCCCTCACCACCATaGAGAGGCCTCTGCAGCCTTTCCACCCCACACCAG +
Preference number: 3 (lower is better)
Translates to: DPGAHYFHPSPP*RGLCSLSTPHQ
Trigger: CTGGTGTGGGGTGGAAAGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 72 bp CACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTaGAGCCTTTCCACCCCACACCAGTCATCTACGGCC +
Preference number: 3 (lower is better)
Translates to: HYFHPSPPWRGL*SLSTPHQSSTA
Trigger: GGCCGTAGATGACTGGTGTGGGGTGGAAAGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 72 bp TCACTGATACTACGCCCCTGGACAGGGAGAGGCCAGTaGGACACAGAACAGATTTGCTCTCCAGGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: SLILRPWTGRGQ*DTEQICSPGPS
Trigger: GCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTATCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 72 bp GGTGAGACTCTTCCACCTTTCTCAGGAGGTGGGACATaGTCACTGATACTACGCCCCTGGACAGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: GETLPPFSGGGT*SLILRPWTGRG
Trigger: GCCTCTCCCTGTCCAGGGGCGTAGTATCAGTGACCATGTCCCACCTCCTGAGAAAGGTGGAAGAGTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CAA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTACTGATCCCAGGCATTTaGGAGAAGGGATACTCAACC +
Preference number: 3 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLLIPGI*EKGYST
Trigger: GGTTGAGTATCCCTTCTCCAAAATGCCTGGGATCAG...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 72 bp TGGTTCCTGACCAGCTGTGTGGGCCCCTATCAACCTTaGAGGGGTATGGAGACTAAAGCCATGGGTGCCCAT +
Preference number: 3 (lower is better)
Translates to: WFLTSCVGPYQP*RGMETKAMGAH
Trigger: ATGGGCACCCATGGCTTTAGTCTCCATACCCCTTCAAGGTTGATAGGGGCCCACACAGCTGGTCAGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 72 bp CAGGGAAAGCCCAGATCTGAGAAGGGAGGCACATCCTaGGGGGTCTTTGGAACCAGTGTGTCTACACTGTGG +
Preference number: 3 (lower is better)
Translates to: QGKPRSEKGGTS*GVFGTSVSTLW
Trigger: CCACAGTGTAGACACACTGGTTCCAAAGACCCCTCAGGATGTGCCTCCCTTCTCAGATCTGGGCTTTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 72 bp CCAGCTGTGTGGGCCCCTATCAACCTTGAAGGGGTATaGAGACTAAAGCCATGGGTGCCCATCTCTAACACC +
Preference number: 3 (lower is better)
Translates to: PAVWAPINLEGV*RLKPWVPISNT
Trigger: GGTGTTAGAGATGGGCACCCATGGCTTTAGTCTCCATACCCCTTCAAGGTTGATAGGGGCCCACACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CAA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCTGCTTCTCGGAAGTATaGATAACAGTTCCCTCTCCG +
Preference number: 3 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTCFSEV*ITVPSP
Trigger: CGGAGAGGGAACTGTTATCAATACTTCCGAGAAGCA...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CAA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATATGAGACCAAATAACTaGCTCAGCAGATGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHMRPNN*LSRCRG
Trigger: CCCTCTGCATCTGCTGAGCAAGTTATTTGGTCTCAT...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 72 bp AACTCCAGATTCCTCCGTCTATTATCCCACAGGCATTaGGTACAGACTGGCTTGTCCCAGCGCTTGGTACTG +
Preference number: 3 (lower is better)
Translates to: NSRFLRLLSHRH*VQTGLSQRLVL
Trigger: CAGTACCAAGCGCTGGGACAAGCCAGTCTGTACTCAATGCCTGTGGGATAATAGACGGAGGAATCTGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 72 bp CCTCCGTCTATTATCCCACAGGCATTGAGTACAGACTaGCTTGTCCCAGCGCTTGGTACTGAGAGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: PPSIIPQALSTD*LVPALGTERKE
Trigger: TTCTTTCCTCTCAGTACCAAGCGCTGGGACAAGCCAGTCTGTACTCAATGCCTGTGGGATAATAGACGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CAA 90 bp ACCCAGTGGTGGATGAAGGAGCAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTACAGTTTCTTCTTTCTaGACCCAAGGCCAACCCTCT +
Preference number: 3 (lower is better)
Translates to: TQWWMKEQNQCLAGKSQLTVSSF*TQGQPS
Trigger: AGAGGGTTGGCCTTGGGTCAAGAAAGAAGAAACTGT...AAGCTGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTTCATCCACCACTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR CAA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCAATACGTACATACAGGTaGGGTATTCCTAATCTGAAA +
Preference number: 3 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSIRTYR*GIPNLK
Trigger: TTTCAGATTAGGAATACCCAACCTGTATGTACGTAT...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 72 bp CTCATCTGCTTACATCTCCTGCTATGCAGTGAATTCTaGAGCAAACCCCACTGCACTGAGGGCATACATACA +
Preference number: 3 (lower is better)
Translates to: LICLHLLLCSEF*SKPHCTEGIHT
Trigger: TGTATGTATGCCCTCAGTGCAGTGGGGTTTGCTGCAGAATTCACTGCATAGCAGGAGATGTAAGCAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 72 bp TCAAAGACCCAGTGGTGGATGAAGGAGCAGAACCAGTaGTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATG +
Preference number: 3 (lower is better)
Translates to: SKTQWWMKEQNQ*LAGKSQLFHPM
Trigger: CATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTTCATCCACCACTGGGTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR CCA 72 bp CCTATCAACCTTGAAGGGGTATGGAGACTAAAGCCATaGGTGCCCATCTCTAACACCCTTCTGGAAAAGACT +
Preference number: 3 (lower is better)
Translates to: PINLEGVWRLKP*VPISNTLLEKT
Trigger: AGTCTTTTCCAGAAGGGTGTTAGAGATGGGCACCCATGGCTTTAGTCTCCATACCCCTTCAAGGTTGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CAA 90 bp CCAAGAATTCTGATTTCTTGTTACCAAATCCTGACTATTTCTATCTGTGGGCAACTCTGTGGTCCTCGCTaGACAGGAGGCTCAAGACTG +
Preference number: 3 (lower is better)
Translates to: PRILISCYQILTISICGQLCGPR*TGGSRL
Trigger: CAGTCTTGAGCCTCCTGTCAAGCGAGGACCACAGAG...TTGCCCACAGATAGAAATAGTCAGGATTTGGTAACAAGAAATCAGAATTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545217.5
3UTR-3UTR CAA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAAAAATTCATCAGCACTaGGTCTGTCCATGCAGTTCC +
Preference number: 3 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGKIHQH*VCPCSS
Trigger: GGAACTGCATGGACAGACCAAGTGCTGATGAATTTT...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 72 bp ACAGTAGGACATTCTTCATTTCACCATGGCTTTCACTaGCCAACAATAAAAAGGTCATGGGCACTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: TVGHSSFHHGFH*PTIKRSWALWE
Trigger: CTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAATGAAGAATGTCCTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR-3UTR CAA 90 bp GGGTCTTTGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTTTTAACACACTTGAATGGCCACAGTTTGTaGACTCCTGGTGTAAAAATA +
Preference number: 3 (lower is better)
Translates to: GSLEPVCLHCGLKFLTHLNGHSL*TPGVKI
Trigger: TATTTTTACACCAGGAGTCAACAAACTGTGGCCATT...CAAGTGTGTTAAAAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR GCA 72 bp TATTTGATCTCCGCCAAAACTACTCAATTCTGCCAGTaGAGCACAAAAGAAGCCCAGACAATACATGTCCAA +
Preference number: 3 (lower is better)
Translates to: YLISAKTTQFCQ*STKEAQTIHVQ
Trigger: TTGGACATGTATTGTCTGGGCTTCTTTTGTGCTGCACTGGCAGAATTGAGTAGTTTTGGCGGAGATCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CCA 72 bp ACATCACATGACAGTAGGACATTCTTCATTTCACCATaGCTTTCACTGCCCAACAATAAAAAGGTCATGGGC +
Preference number: 3 (lower is better)
Translates to: TSHDSRTFFISP*LSLPNNKKVMG
Trigger: GCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAATGAAGAATGTCCTACTGTCATGTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR TCA 72 bp GTTGTACTCATGGTGGACAGCCACCATTCTAATGCTTaGCTTTACATAATTAACGCATGTAATCTGCAAAGG +
Preference number: 3 (lower is better)
Translates to: VVLMVDSHHSNA*LYIINACNLQR
Trigger: CCTTTGCAGATTACATGCGTTAATTATGTAAAGTCAAGCATTAGAATGGTGGCTGTCCACCATGAGTACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACGTCTGTGCTGGTTCCTaGCCAGCTGTGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHVCAGS*PAVWAP
Trigger: AGGGGCCCACACAGCTGGTCAGGAACCAGCACAGAC...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACCTGACCTGGGGGTTCTaGAGAAGCCTCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHLTWGF*RSLTAS
Trigger: CGAGGCTGTGAGGCTTCTGCAGAACCCCCAGGTCAG...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTCTGCACTCCAGAGCCTaGGCGACAGAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPLHSRA*ATERDS
Trigger: GGAGTCTCGCTCTGTCGCCCAGGCTCTGGAGTGCAG...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 72 bp TCCACCCCACACCAGTCATCTACGGCCGGCCAGCCCTaGTACCTGGACTCCCCAGGTGAGACTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: STPHQSSTAGQP*YLDSPGETLPP
Trigger: AGGTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATGACTGGTGTGGGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTACACCCCTCACCACCATaGAGAGGCCTCTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLHPSPP*RGLCSL
Trigger: AAGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTG...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCCCAGCCGCCCCTTCCTaGCCCTACAGAACCCCCACT +
Preference number: 4 (lower is better)
Translates to: YYAPGQGEASETQNRFALPAAPS*PYRTPT
Trigger: AGTGGGGGTTCTGTAGGGTCAGGAAGGGGCGGCTGG...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTATTAGGGAGGCCCACGTaGGGAGTGAACATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLLGRPT*GVNMWL
Trigger: CAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAA...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACGAACGAGCAGCTTTCTaGAAGTGGGGAGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHERAAF*KWGGRA
Trigger: AGCCCTTCCTCCCCACTTCCAGAAAGCTGCTCGTTC...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTATCGCAAGATCCATCCTaGTTCTCTGGACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLSQDPS*FSGPRT
Trigger: GGTCCTGGGTCCAGAGAAGCAGGATGGATCTTGCGA...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTATCAGGAGGTGGGACATaGTCACTGATACTACGCCCC +
Preference number: 4 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLSGGGT*SLILRP
Trigger: GGGGCGTAGTATCAGTGACCATGTCCCACCTCCTGA...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTCCTGTGTGGCTTCTTTaGTGGACAATCAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPPVWLL*WTIRCA
Trigger: GGCACACCTGATTGTCCATCAAAGAAGCCACACAGG...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCGCAGCCTCAATGATGTaGCCTGACCTGGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTAASMM*PDLGVL
Trigger: CAGAACCCCCAGGTCAGGCCACATCATTGAGGCTGC...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCAGTCAGAGGTGTGGGATaGCCAGGGAACGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSVRGVG*PGNEQL
Trigger: AAGCTGCTCGTTCCCTGGCCATCCCACACCTCTGAC...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACGAAAAGACTTCCAGCTaGCAGAAATCTCCCACCACA +
Preference number: 4 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHEKTSS*QKSPTT
Trigger: TGTGGTGGGAGATTTCTGTCAGCTGGAAGTCTTTTC...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGTGCCACCTTCCTCCCTaGAACTGGTCAGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGCHLPP*NWSGCH
Trigger: GTGGCACCCTGACCAGTTTCAGGGAGGAAGGTGGCA...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTTTATCCCACAGGCATTaGGTACAGACTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPLSHRH*VQTGLS
Trigger: GGACAAGCCAGTCTGTACTCAATGCCTGTGGGATAA...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCACAAGGTGGGGCCTCGTaGGAATCATTTTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSQGGAS*ESFSQG
Trigger: ACCCTGGGAAAATGATTCGCACGAGGCCCCACCTTG...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCCCCAGCACAGGCTCCTaGATGTGCAGTCACCTTGTT +
Preference number: 4 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTPSTGS*MCSHLV
Trigger: AACAAGGTGACTGCACATGCAGGAGCCTGTGCTGGG...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTTGGAGACTAAAGCCATaGGTGCCCATCTCTAACACC +
Preference number: 4 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPWRLKP*VPISNT
Trigger: GGTGTTAGAGATGGGCACCCATGGCTTTAGTCTCCA...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGGCCAGCCCTTGTACCTaGACTCCCCAGGTGAGACTC +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGASPCT*TPQVRL
Trigger: GAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGC...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 72 bp AGACAGAGGGGGTTGCGAGGTAGGGAGGAAACTAAGTaGTTAAAGCCAACAGGCCCCGGAAGTGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RQRGLRGREETK*LKPTGPGSGTR
Trigger: CCTCGTGCCACTTCCGGGGCCTGTTGGCTTTAACAACTTAGTTTCCTCCCTACCTCGCAACCCCCTCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCCTCGGTCTCTCTTGCTaGCAACTCCACTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTLGLSC*QLHFSQ
Trigger: CTGGGAAAAGTGGAGTTGTCAGCAAGAGAGACCGAG...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGGTGGGACATGGTCACTaGTACTACGCCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGVGHGH*YYAPGQ
Trigger: CTGTCCAGGGGCGTAGTATCAGTGACCATGTCCCAC...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTAACTCAATTCTGCCAGTaGAGCACAAAAGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLTQFCQ*STKEAQ
Trigger: CTGGGCTTCTTTTGTGCTGCACTGGCAGAATTGAGT...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGGCGGAGAGTCGTACTaGGCTATGAAGAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: ETQNRFALQGPAQAPACAGGESY*AMKRDP
Trigger: AGGATCTCTCTTCATAGCCCAGTACGACTCTCCGCC...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCACAGGAACCTGGCTCCTaGGCCTGTGCACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPQEPGS*ACALKR
Trigger: TCTTTTAAGTGCACAGGCCCAGGAGCCAGGTTCCTG...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTAACCTTGAAGGGGTATaGAGACTAAAGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPNLEGV*RLKPWV
Trigger: CACCCATGGCTTTAGTCTCCATACCCCTTCAAGGTT...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp AAAGACCCAGTGGTGGATGAAGGAGCAGAACCAGTGCTTAGCAGGAAAGAGTCACTGACCTGGGGGTTCTaGAGAAGCCTCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KDPVVDEGAEPVLSRKESLTWGF*RSLTAS
Trigger: CGAGGCTGTGAGGCTTCTGCAGAACCCCCAGGTCAG...TGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTTCATCCACCACTGGGTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCAGCTCATCTTTCTTTGTaGGGTCAGCATCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPAHLSL*GQHPAS
Trigger: TGAGGCTGGATGCTGACCGCACAAAGAAAGATGAGC...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCATGCAGCAAACCCCACTaGACTGAGGGCATACATACA +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPCSKPH*TEGIHT
Trigger: TGTATGTATGCCCTCAGTGCAGTGGGGTTTGCTGCA...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACTGGCATCAGATAGCTTaGTTCAAATCCAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHWHQIA*FKSRLF
Trigger: GAAAAGCCTGGATTTGAACCAAGCTATCTGATGCCA...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTAAATCCAAAATGCTTCTaGTCCCAGGCATTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLNPKCF*SQAFWR
Trigger: TCTCCAAAATGCCTGGGATCAGAAGCATTTTGGATT...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCAGCTTGGGGGCTATTTaGTCTCCGCCAAAACTACTC +
Preference number: 4 (lower is better)
Translates to: YYAPGQGEASETQNRFALSLGAI*SPPKLL
Trigger: GAGTAGTTTTGGCGGAGATCAAATAGCCCCCAAGCT...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGGTTTTAGACACAGCCTaGGGTCTGTGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGVLDTA*GLCWFL
Trigger: CAGGAACCAGCACAGACCTCAGGCTGTGTCTAAAAC...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCATATGAAGAGAGATCCTaGAGCCTCAATGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: ETQNRFALQGPAQAPACAYEERS*SLNDVA
Trigger: GGCCACATCATTGAGGCTGCAGGATCTCTCTTCATA...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCACTATGCAGTGAATTCTaGAGCAAACCCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: ETQNRFALQGPAQAPACALCSEF*SKPHCT
Trigger: AGTGCAGTGGGGTTTGCTGCAGAATTCACTGCATAG...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCAACAGGCTCCTGCATGTaGAGTCACCTTGTTTTAGAC +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSTGSCM*SHLVLD
Trigger: GTCTAAAACAAGGTGACTGCACATGCAGGAGCCTGT...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATCTAGACAGAGGGGGTTaGGAGGTAGGGAGGAAACTA +
Preference number: 4 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHLDRGG*EVGRKL
Trigger: TAGTTTCCTCCCTACCTCGCAACCCCCTCTGTCTAG...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCAACCTTTCTCAGGAGGTaGGACATGGTCACTGATACT +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPTFLRR*DMVTDT
Trigger: AGTATCAGTGACCATGTCCCACCTCCTGAGAAAGGT...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 72 bp CCAGATCTGAGAAGGGAGGCACATCCTGAGGGGTCTTaGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PDLRREAHPEGS*EPVCLHCGLKF
Trigger: AAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCCCTCAGGATGTGCCTCCCTTCTCAGATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATCTATGGCTGAATAGCTaGCCAGACCCAACAACGTCA +
Preference number: 4 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHLWLNS*PDPTTS
Trigger: TGACGTTGTTGGGTCTGGTCAGCTATTCAGCCATAG...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATGACTGGGGCTAACTATCCCCAGGGCTaGCCCTGTTTACCTCGCAAG +
Preference number: 4 (lower is better)
Translates to: QNQCLAGKSQLFHPMTGANYPQG*PCLPRK
Trigger: CTTGCGAGGTAAACAGGGGCAGCCCTGGGGATAGTT...AGCCCCAGTCATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp CAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATGACTGGGGCTTCCATCCTGCTTCTCTaGACCCAGGACCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QNQCLAGKSQLFHPMTGASILLL*TQDLRL
Trigger: AAGCCTCAGGTCCTGGGTCCAGAGAAGCAGGATGGA...AGCCCCAGTCATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACAAGCACTGTGACTCATaGGTTGAATTTGATTTTGCT +
Preference number: 4 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHKHCDS*VEFDFA
Trigger: AGCAAAATCAAATTCAACCCATGAGTCACAGTGCTT...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATCCTGAGTGGATTCTCTaGTGCAAGCTGAGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHPEWIL*CKLSVD
Trigger: GTCAACACTCAGCTTGCACCAGAGAATCCACTCAGG...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGGCAGAGGGTAGAGAGTaGAGCCAGGAATCAAATGCA +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGAEGRE*SQESNA
Trigger: TGCATTTGATTCCTGGCTCCACTCTCTACCCTCTGC...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTGTTGTACTCATGGTaGACAGCCACCATTCTAATG +
Preference number: 4 (lower is better)
Translates to: ETQNRFALQGPAQAPACAVLYSW*TATILM
Trigger: CATTAGAATGGTGGCTGTCCACCATGAGTACAACAC...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp AAAGACCCAGTGGTGGATGAAGGAGCAGAACCAGTGCTTAGCAGGAAAGAGTCATCTGCCCTCACGTTCTaGAGAACTATCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KDPVVDEGAEPVLSRKESSALTF*RTIPRA
Trigger: AGCCCTGGGGATAGTTCTCCAGAACGTGAGGGCAGA...TGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTTCATCCACCACTGGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp GCACCTTATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAAAACATCAGCCTCTGTaGTCCTCGCTTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: APYENRGKTGQTPWTKQGKHQPL*SSLDRR
Trigger: CCTCCTGTCAAGCGAGGACCACAGAGGCTGATGTTT...TCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATAAGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCAATGAACCATCTCTTGTaGACTCACCTACCATATCCT +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPMNHLL*THLPYP
Trigger: AGGATATGGTAGGTGAGTTCACAAGAGATGGTTCAT...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCAGAATTTGATGTTGCTTaGGTGACTGTTTATGGCCAC +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPEFDVA*VTVYGH
Trigger: GTGGCCATAAACAGTCACTCAAGCAACATCAAATTC...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCAAGGTTTCCTACACTATaGATTCTCTGTTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSRFPTL*ILCWAK
Trigger: CTTTGCCCAACAGAGAATTCATAGTGTAGGAAACCT...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCAGTTTTAGTTGTGGCATaGAGGCTTTTCCACATTTGC +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSVLVVA*RLFHIC
Trigger: GCAAATGTGGAAAAGCCTTCATGCCACAACTAAAAC...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCACATCTCTTAGTTCTCTaGGCCAACAGATCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSHLLVL*ANRSFH
Trigger: GTGAAAAGATCTGTTGGCTCAGAGAACTAAGAGATG...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp ACCCTCTACTATCCTCTTTTATCAGCCAGTTCATGGTTTCCTCTAGAACACAGACAGGAGGCTCAAGACTaGCTCAGGAGCAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLYYPLLSASSWFPLEHRQEAQD*LRSREP
Trigger: GGGCTCCCTGCTCCTGAGTCAGTCTTGAGCCTCCTG...TCTGTGTTCTAGAGGAAACCATGAACTGGCTGATAAAAGAGGATAGTAGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGCTGTTCTGTGTCATTaGTTTCATTCTGACCGTTCA +
Preference number: 4 (lower is better)
Translates to: ETQNRFALQGPAQAPACAAVLCH*FHSDRS
Trigger: TGAACGGTCAGAATGAAAGCAATGACACAGAACAGC...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCATCATGTGTTCACACATaGAGTGCATCCCTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ETQNRFALQGPAQAPACASCVHT*SASLEF
Trigger: AAACTCTAGGGATGCACTGCATGTGTGAACACATGA...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTAAAAACTACTCAATTCTaGCAGTGCAGCACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLKTTQF*QCSTKE
Trigger: TTCTTTTGTGCTGCACTGGCAGAATTGAGTAGTTTT...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGACCATGGAGAGGCCTCTaGAGCCTTTCCACCCCACAC +
Preference number: 4 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGPWRGL*SLSTPH
Trigger: GTGTGGGGTGGAAAGGCTGCAGAGGCCTCTCCATGG...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CCTTATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTGCTGCATCCTGTGTCTaGCCTCACGTTCTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PYENRGKTGQTPWTKQGIAASCV*PHVLEN
Trigger: GTTCTCCAGAACGTGAGGGCAGACACAGGATGCAGC...AATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp CCTTATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTCAGGCATCTCCACTCTaGGCTTCTACTCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PYENRGKTGQTPWTKQGIQASPL*ASTLGL
Trigger: GAGACCGAGAGTAGAAGCCCAGAGTGGAGATGCCTG...AATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCAACAGGCCCCGGAAGTaGCACGAGGTCAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTNRPRK*HEVRGV
Trigger: CACACCTCTGACCTCGTGCCACTTCCGGGGCCTGTT...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CCTTATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTAGTCGTACTGGGCTATaGAGAGAGATCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PYENRGKTGQTPWTKQGISRTGL*REILQP
Trigger: AGGCTGCAGGATCTCTCTTCATAGCCCAGTACGACT...AATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGTTGATGTTGCTTGAGTaGCTGTTTATGGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGLMLLE*LFMATD
Trigger: GTCTGTGGCCATAAACAGTCACTCAAGCAACATCAA...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCGAGTTCTCTGATGTCTaGAGAGAGATAACATCTGGA +
Preference number: 4 (lower is better)
Translates to: YYAPGQGEASETQNRFALEFSDV*REITSG
Trigger: TCCAGATGTTATCTCTCTTCAGACATCAGAGAACTC...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGGAGCATGCCCTCATGTaGCTGAAAACTTTAGATAGC +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGEHALM*LKTLDS
Trigger: GCTATCTAAAGTTTTCAGTCACATGAGGGCATGCTC...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CCTTATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTTATGACTGGGGCTTCTaGTCAGACCAGGGACTACAG +
Preference number: 4 (lower is better)
Translates to: PYENRGKTGQTPWTKQGIYDWGF*SDQGLQ
Trigger: CTGTAGTCCCTGGTCTGATCAGAAGCCCCAGTCATA...AATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCAGCACTAGGAATTCATTaGTTGGTAAAGCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPALGIH*LVKPFT
Trigger: TGTGAAAGGCTTTACCAAGCAATGAATTCCTAGTGC...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp TCTTCTTTCTTGACCCAAGGCCAACCCTCTACTATCCTCTTTTATCAGCCAGTTGCAGCCTCAATGATGTaGCCTGACCTGGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSFLTQGQPSTILFYQPVAASMM*PDLGVL
Trigger: CAGAACCCCCAGGTCAGGCCACATCATTGAGGCTGC...AACTGGCTGATAAAAGAGGATAGTAGAGGGTTGGCCTTGGGTCAAGAAAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp ATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTTGGTGGCGGAGAGTCGTACTaGGCTATGAAGAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: MRTEEKRAKPHGPSKEFGGGESY*AMKRDP
Trigger: AGGATCTCTCTTCATAGCCCAGTACGACTCTCCGCC...ACCAAATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp CTTCCAGCTGACAGAAATCTCCCACCACAGTCCCACACCCAGCACAAGGGAACCTTGAGTGACTGTTTATaGCCACAGACTTTTCTACAC +
Preference number: 4 (lower is better)
Translates to: LPADRNLPPQSHTQHKGTLSDCL*PQTFLH
Trigger: GTGTAGAAAAGTCTGTGGCCATAAACAGTCACTCAA...GGTTCCCTTGTGCTGGGTGTGGGACTGTGGTGGGAGATTTCTGTCAGCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCACTAGTGTGTGTTTTCTaGTGCGTAAGCAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSLVCVF*CVSNSD
Trigger: ATCAGAATTGCTTACGCACCAGAAAACACACACTAG...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCAAGTGTGTCTACACTGTaGGCTCAAGTTTTTAACACA +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSSVSTL*AQVFNT
Trigger: TGTGTTAAAAACTTGAGCCCACAGTGTAGACACACT...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 72 bp CTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTaGGTCTGTCCATGCAGTTCCAAGGGTTTAACACAC +
Preference number: 4 (lower is better)
Translates to: LRDTRPAKIHQH*VCPCSSKGLTH
Trigger: GTGTGTTAAACCCTTGGAACTGCATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 72 bp AAACTCCAGATTCCTCCGTCTATTATCCCACAGGCATaGAGTACAGACTGGCTTGTCCCAGCGCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: KLQIPPSIIPQA*STDWLVPALGT
Trigger: AGTACCAAGCGCTGGGACAAGCCAGTCTGTACTCAATGCCTGTGGGATAATAGACGGAGGAATCTGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 72 bp AGAGCCCATGAGCCTAACTACTACTGTGCCCAACCTTaGTGCCAATCGCCACAACAGTCAAAGGATGGATCA +
Preference number: 4 (lower is better)
Translates to: RAHEPNYYCAQP*CQSPQQSKDGS
Trigger: TGATCCATCCTTTGACTGTTGTGGCGATTGGCACAAAGGTTGGGCACAGTAGTAGTTAGGCTCATGGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp CCAAGAATTCTGATTTCTTGTTACCAAATCCTGACTATTTCTATCTGTGGGCAACCAGCCGCCCCTTCCTaGCCCTACAGAACCCCCACT +
Preference number: 4 (lower is better)
Translates to: PRILISCYQILTISICGQPAAPS*PYRTPT
Trigger: AGTGGGGGTTCTGTAGGGTCAGGAAGGGGCGGCTGG...TTGCCCACAGATAGAAATAGTCAGGATTTGGTAACAAGAAATCAGAATTCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp GGGTCTTTGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTTTTAACACACTTGAGTCGTACTGGGCTATaGAGAGAGATCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSLEPVCLHCGLKFLTHLSRTGL*REILQP
Trigger: AGGCTGCAGGATCTCTCTTCATAGCCCAGTACGACT...CAAGTGTGTTAAAAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GAGACACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCATCAATGTTTTCTTGTTaGAGAAAGCACTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: ETQNRFALQGPAQAPACASMFSC*RKHCDS
Trigger: TGAGTCACAGTGCTTTCTTCAACAAGAAAACATTGA...TGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGTTGGGCAAAGAGGTGTaGCTTCTGGGTGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMLGKEV*LLGEAP
Trigger: GGGAGCTTCACCCAGAAGTCACACCTCTTTGCCCAA...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCATACATACACATATGCTaGCCAGACCATATACATATG +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPYIHIC*PDHIHM
Trigger: CATATGTATATGGTCTGGTCAGCATATGTGTATGTA...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAAGGGAGGCACATCCTaGGGGGTCTTTGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMKGGTS*GVFGTS
Trigger: ACTGGTTCCAAAGACCCCTCAGGATGTGCCTCCCTT...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAACACATGTGGCTGGAGATaGGGACCCAGAGTGATCCCC +
Preference number: 4 (lower is better)
Translates to: AIFGQWPQFVDSWCKNMNTCGWR*GPRVIP
Trigger: GGGGATCACTCTGGGTCCTCATCTCCAGCCACATGT...GTTCATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp AAAGACCCAGTGGTGGATGAAGGAGCAGAACCAGTGCTTAGCAGGAAAGAGTCACAGTTTCTTCTTTCTTaGCCCAAGGCCAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: KDPVVDEGAEPVLSRKESQFLLS*PKANPL
Trigger: TAGAGGGTTGGCCTTGGGTCAAGAAAGAAGAAACTG...TGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTTCATCCACCACTGGGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp CAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATGACTGGGGCTTATGAAGAGAGATCCTaGAGCCTCAATGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: QNQCLAGKSQLFHPMTGAYEERS*SLNDVA
Trigger: GGCCACATCATTGAGGCTGCAGGATCTCTCTTCATA...AGCCCCAGTCATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCATACACTGGTTACCTTTaGAAAATGTCTCTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSYTGYL*KMSLLY
Trigger: ATACAGGAGAGACATTTTGCAAAGGTAACCAGTGTA...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATTGTTCACACATGCAGTaGATCCCTAGAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHCSHMQ*IPRVFL
Trigger: CAGAAAAACTCTAGGGATGCACTGCATGTGTGAACA...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGAGCCAGGAATCAAATaGAGGAACCTGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGEPGIK*RNLAPG
Trigger: CCCAGGAGCCAGGTTCCTGCATTTGATTCCTGGCTC...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGCTGAGATCGTGCCACTaGACTCCAGAGCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMLRSCH*TPEPGR
Trigger: TCGCCCAGGCTCTGGAGTGCAGTGGCACGATCTCAG...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGCACCATGGCTTTCACTaGCCAACAATAAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGHHGFH*PTIKRS
Trigger: TGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTG...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGACAGGCATCTCCACTCTaGGCTTCTACTCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGQASPL*ASTLGL
Trigger: GAGACCGAGAGTAGAAGCCCAGAGTGGAGATGCCTG...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCTCCATCCTGCTTCTCTaGACCCAGGACCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTSILLL*TQDLRL
Trigger: AAGCCTCAGGTCCTGGGTCCAGAGAAGCAGGATGGA...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGTCCATCCTGCTTCTCTaGACCCAGGACCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMSILLL*TQDLRL
Trigger: AAGCCTCAGGTCCTGGGTCCAGAGAAGCAGGATGGA...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000436511.2
CDS-3UTR CCA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCAAAGAGAGATAACATCTaGAAAAAGGCTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPKRDNI*KKAFPQ
Trigger: CTGTGGAAAAGCCTTTTTCCAGATGTTATCTCTCTT...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCACTTAAAAGATTATGCTaGTCTGCTTCTCGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSLKRLC*SASRKY
Trigger: ATACTTCCGAGAAGCAGACCAGCATAATCTTTTAAG...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCTTCTTCATTTCACCATaGCTTTCACTGCCCAACAAT +
Preference number: 4 (lower is better)
Translates to: YYAPGQGEASETQNRFALFFISP*LSLPNN
Trigger: ATTGTTGGGCAGTGAAAGCCATGGTGAAATGAAGAA...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGTTGACACCTCTGATGTaGGACTTCAGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMLTPLM*DFSLLH
Trigger: GTGGAGGAGGCTGAAGTCTCACATCAGAGGTGTCAA...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000436511.2
CDS-3UTR TCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGGGGAAAGCCCAGATCTaGGAAGGGAGGCACATCCTG +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMGKAQI*EGRHIL
Trigger: CAGGATGTGCCTCCCTTCTCAGATCTGGGCTTTCCC...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCTGTGTGTGTATCATGTaGTGGCAAACATTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: YYAPGQGEASETQNRFALCVCIM*WQTFSV
Trigger: TACAGAAAATGTTTGCCAGCACATGATACACACACA...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CACAGAACAGATTTGCTCTCCAGGGCCCAGCACAGGCTCCTGCATGTGCAGTCATGGCTAAATAAATTATaGCAGGTCAACCTCATAGAA +
Preference number: 4 (lower is better)
Translates to: HRTDLLSRAQHRLLHVQSWLNKL*QVNLIE
Trigger: TTCTATGAGGTTGACCTGCCATAATTTATTTAGCCA...TGACTGCACATGCAGGAGCCTGTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp AAAGACCCAGTGGTGGATGAAGGAGCAGAACCAGTGCTTAGCAGGAAAGAGTCATTTTCAAAGACCCAGTaGTGGATGAAGGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KDPVVDEGAEPVLSRKESFSKTQ*WMKEQN
Trigger: GTTCTGCTCCTTCATCCACCACTGGGTCTTTGAAAA...TGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTTCATCCACCACTGGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGACAGAAGAGCTATGGCTaGATAGCTGACCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGQKSYG*IADQTQ
Trigger: TTGGGTCTGGTCAGCTATTCAGCCATAGCTCTTCTG...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGGATTTGTCTCTGGTATaGGTTGTTTGGTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGDLSLV*VVWCLL
Trigger: CAATAAACACCAAACAACTCATACCAGAGACAAATC...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAACACAGGGAGAGGCCAGTaGGACACAGAACAGATTTGC +
Preference number: 4 (lower is better)
Translates to: AIFGQWPQFVDSWCKNMNTGRGQ*DTEQIC
Trigger: GCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGT...GTTCATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATTATGAATATTCTTGCTaGAGGCATCAGAAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHYEYSC*RHQKSY
Trigger: ATAGCTCTTCTGATGCCTGCAGCAAGAATATTCATA...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGAAGATTATGCTGGTCTaGTTCTCGGAAGTATTGATA +
Preference number: 4 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGKIMLV*FSEVLI
Trigger: TATCAATACTTCCGAGAAGCAGACCAGCATAATCTT...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGTGTGAAGAAGCAAGGTaGGGCCTCGTGCGAATCATT +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMCEEAR*GLVRII
Trigger: AATGATTCGCACGAGGCCCCACCTTGCTTCTTCACA...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GGGTCTTTGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTTTTAACACACTTGTTTCAGTTTCCAGCTTaGGGGCTATTTGATCTCCGC +
Preference number: 4 (lower is better)
Translates to: GSLEPVCLHCGLKFLTHLFQFPA*GLFDLR
Trigger: GCGGAGATCAAATAGCCCCCAAGCTGGAAACTGAAA...CAAGTGTGTTAAAAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp AAGGCCAACCCTCTACTATCCTCTTTTATCAGCCAGTTCATGGTTTCCTCTAGATCAAAGACCCAGTGGTaGATGAAGGAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: KANPLLSSFISQFMVSSRSKTQW*MKEQNQ
Trigger: CTGGTTCTGCTCCTTCATCCACCACTGGGTCTTTGA...TCTAGAGGAAACCATGAACTGGCTGATAAAAGAGGATAGTAGAGGGTTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp CAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATGACTGGGGCTTATCTGTGGGCAATCTaGAAACACTGTTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QNQCLAGKSQLFHPMTGAYLWAI*KHCFPA
Trigger: TGCTGGAAAACAGTGTTTCCAGATTGCCCACAGATA...AGCCCCAGTCATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGTTGACACCTCTGATGTaGGACTTCAGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMLTPLM*DFSLLH
Trigger: GTGGAGGAGGCTGAAGTCTCACATCAGAGGTGTCAA...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGCAAACCCCACTGCACTaGGGGCATACATACATACAT +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMQTPLH*GHTYIH
Trigger: ATGTATGTATGTATGCCCTCAGTGCAGTGGGGTTTG...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCCTTTTCACAGATCTGTaGGCATGCCCTCATGTGACT +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTLFTDL*ACPHVT
Trigger: AGTCACATGAGGGCATGCTCACAGATCTGTGAAAAG...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp AAGGCCAACCCTCTACTATCCTCTTTTATCAGCCAGTTCATGGTTTCCTCTAGAAGCTTTTCCATCCTATaGCTGGGGCTTCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: KANPLLSSFISQFMVSSRSFSIL*LGLLIR
Trigger: TCTGATCAGAAGCCCCAGTCATAGGATGGAAAAGCT...TCTAGAGGAAACCATGAACTGGCTGATAAAAGAGGATAGTAGAGGGTTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp AAGGCCAACCCTCTACTATCCTCTTTTATCAGCCAGTTCATGGTTTCCTCTAGATTTTGCCGCACCTTATaGGAACAGAGGAAAAACGGG +
Preference number: 4 (lower is better)
Translates to: KANPLLSSFISQFMVSSRFCRTL*EQRKNG
Trigger: CCCGTTTTTCCTCTGTTCTCATAAGGTGCGGCAAAA...TCTAGAGGAAACCATGAACTGGCTGATAAAAGAGGATAGTAGAGGGTTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp TCTTCTTTCTTGACCCAAGGCCAACCCTCTACTATCCTCTTTTATCAGCCAGTTAAGGAGCAGAACCAGTaGTTAGCAGGAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSFLTQGQPSTILFYQPVKEQNQ*LAGKSQ
Trigger: CTGACTCTTTCCTGCTAAGCACTGGTTCTGCTCCTT...AACTGGCTGATAAAAGAGGATAGTAGAGGGTTGGCCTTGGGTCAAGAAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCCCAGGAGCCAGAAGCTaGATAGGTGTTTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTPGARS*IGVWIF
Trigger: GAAAATCCAAACACCTATCCAGCTTCTGGCTCCTGG...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAATCCTGAGGGGTCTTTaGAACCAGTGTGTCTACACT +
Preference number: 4 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGILRGL*NQCVYT
Trigger: AGTGTAGACACACTGGTTCCAAAGACCCCTCAGGAT...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGGCATTGAGTACAGACTaGCTTGTCCCAGCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMALSTD*LVPALG
Trigger: ACCAAGCGCTGGGACAAGCCAGTCTGTACTCAATGC...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp GGGTCTTTGGAACCAGTGTGTCTACACTGTGGGCTCAAGTTTTTAACACACTTGAATGTCTCTCCTGTATaGATATTCTTGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GSLEPVCLHCGLKFLTHLNVSPV*IFLLQA
Trigger: TGCCTGCAGCAAGAATATTCATACAGGAGAGACATT...CAAGTGTGTTAAAAACTTGAGCCCACAGTGTAGACACACTGGTTCCAAAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp ACCAAGAATTCTGATTTCTTGTTACCAAATCCTGACTATTTCTATCTGTGGGCAAGACCCAGTGGTGGATaGAGGAGCAGAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TKNSDFLLPNPDYFYLWARPSGG*RSRTSA
Trigger: AGCACTGGTTCTGCTCCTTCATCCACCACTGGGTCT...TGCCCACAGATAGAAATAGTCAGGATTTGGTAACAAGAAATCAGAATTCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp CCTTATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTCACTCTACCTCCCTGTaGCTATTTAAATTACAAAGG +
Preference number: 4 (lower is better)
Translates to: PYENRGKTGQTPWTKQGIHSTSL*LFKLQR
Trigger: CCTTTGTAATTTAAATAGTCACAGGGAGGTAGAGTG...AATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCAATGTGATACCCCACTaGGAAGAGATGGCTATAGAG +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTNVIPH*EEMAIE
Trigger: CTCTATAGCCATCTCTTCGCAGTGGGGTATCACATT...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAATGTGATACCCCACTaGGAAGAGATGGCTATAGAG +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMNVIPH*EEMAIE
Trigger: CTCTATAGCCATCTCTTCGCAGTGGGGTATCACATT...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000436511.2
CDS-3UTR CCA 90 bp GCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAACGCCATATTTGGCCAATaGCCACAGTTTGTTGACTCC +
Preference number: 4 (lower is better)
Translates to: AIFGQWPQFVDSWCKNMNAIFGQ*PQFVDS
Trigger: GGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC...GTTCATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000436511.2
3UTR CAA 72 bp CTTCTGATCAGACCAGGGACTACAGTTTCTTCTTTCTaGACCCAAGGCCAACCCTCTACTATCCTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LLIRPGTTVSSF*TQGQPSTILFY
Trigger: ATAAAAGAGGATAGTAGAGGGTTGGCCTTGGGTCAAGAAAGAAGAAACTGTAGTCCCTGGTCTGATCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCGGGCAGTATGTTTTCTaGTCACATCACATGACAGTA +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTGQYVF*SHHMTV
Trigger: TACTGTCATGTGATGTGATCAGAAAACATACTGCCC...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp TCTTCTTTCTTGACCCAAGGCCAACCCTCTACTATCCTCTTTTATCAGCCAGTTCTTGTTACCAAATCCTaGCTATTTCTATCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SSFLTQGQPSTILFYQPVLVTKS*LFLSVG
Trigger: GCCCACAGATAGAAATAGTCAGGATTTGGTAACAAG...AACTGGCTGATAAAAGAGGATAGTAGAGGGTTGGCCTTGGGTCAAGAAAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR GCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGGAGTGGATTCTCTGGTaGAAGCTGAGTGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMEWILW*KLSVDF
Trigger: GAAGTCAACACTCAGCTTGCACCAGAGAATCCACTC...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp GCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAACTTAACGCATGTAATCTaGAAAGGAGCCACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: AIFGQWPQFVDSWCKNMNLTHVI*KGATRR
Trigger: TCGCCTTGTGGCTCCTTTGCAGATTACATGCGTTAA...GTTCATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGGCCATATTTGGCCAATaGCCACAGTTTGTTGACTCC +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMAIFGQ*PQFVDS
Trigger: GGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAAATTCATCAGCACTTaGTCTGTCCATGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMKFIST*SVHAVP
Trigger: TGGAACTGCATGGACAGACCAAGTGCTGATGAATTT...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAGTAGCTTCTCCCTCTaGAAACTCAAAACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMSSFSL*KLKTLD
Trigger: GTCAAGAGTTTTGAGTTTCCAGAGGGAGAAGCTACT...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCGTGCGTAAGCAATTCTaGTCTCTGAATAAAGACCTT +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTVRKQF*SLNKDL
Trigger: AAGGTCTTTATTCAGAGATCAGAATTGCTTACGCAC...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCATGGGTAATCAACTCTaGTTTCTGGACAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTMGNQL*FLDKSL
Trigger: AAGGCTTTTGTCCAGAAATCAGAGTTGATTACCCAT...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp AAGGCCAACCCTCTACTATCCTCTTTTATCAGCCAGTTCATGGTTTCCTCTAGAGACTATTTCTATCTGTaGGCAATCTGGAAACACTGT +
Preference number: 4 (lower is better)
Translates to: KANPLLSSFISQFMVSSRDYFYL*AIWKHC
Trigger: ACAGTGTTTCCAGATTGCCCACAGATAGAAATAGTC...TCTAGAGGAAACCATGAACTGGCTGATAAAAGAGGATAGTAGAGGGTTGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGTCATTGCTTTCATTCTaGCCGTTCACTTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMSLLSF*PFTSRF
Trigger: GAACCTAGAAGTGAACGGTCAGAATGAAAGCAATGA...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR TCA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCGAAAACCAGAATAGATaGGACCAAATAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KTLDSSLGPINSKANHPTENQNR*DQITCS
Trigger: TGAGCAAGTTATTTGGTCTCATCTATTCTGGTTTTC...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR GCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGTCTGCTTACATCTCCTaGTATGCAGTGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMSAYIS*YAVNSA
Trigger: TGCAGAATTCACTGCATAGCAGGAGATGTAAGCAGA...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp ATTTCACCATGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGACAGACTTTTCTACACTaGTTACCTTTGCAAAATGTC +
Preference number: 4 (lower is better)
Translates to: ISPWLSLPNNKKVMGTLGQTFLH*LPLQNV
Trigger: GACATTTTGCAAAGGTAACCAGTGTAGAAAAGTCTG...TCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCATGGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGCAGTTTGTTGACTCCTaGTGTAAAAATATGAACGAG +
Preference number: 4 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMQFVDS*CKNMNE
Trigger: CTCGTTCATATTTTTACACCAGGAGTCAACAAACTG...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000436511.2
CDS-3UTR CCA 90 bp ACCCTCTACTATCCTCTTTTATCAGCCAGTTCATGGTTTCCTCTAGAACACAGATTATCAGCCAGTTCATaGTTTCCTCTAGAACACAGA +
Preference number: 4 (lower is better)
Translates to: TLYYPLLSASSWFPLEHRLSASS*FPLEHR
Trigger: TCTGTGTTCTAGAGGAAACCATGAACTGGCTGATAA...TCTGTGTTCTAGAGGAAACCATGAACTGGCTGATAAAAGAGGATAGTAGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR TCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGGGTATATCACCTGTATaGTCTGTCAGATATACACTG +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMGISPV*SVRYTL
Trigger: CAGTGTATATCTGACAGATCATACAGGTGATATACC...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp GCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAACGTGTGTATCATGTGCTaGCAAACATTTTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: AIFGQWPQFVDSWCKNMNVCIMC*QTFSVK
Trigger: CTTTACAGAAAATGTTTGCCAGCACATGATACACAC...GTTCATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CCA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGTCAAAACTGTGGGAATaGCTAAATAAATTATGGCAG +
Preference number: 4 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMSKLWE*LNKLWQ
Trigger: CTGCCATAATTTATTTAGCCATTCCCACAGTTTTGA...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
3UTR CAA 72 bp TCAGGAAATCTTGACTATACCAAGAATTCTGATTTCTaGTTACCAAATCCTGACTATTTCTATCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGNLDYTKNSDF*LPNPDYFYLWA
Trigger: TGCCCACAGATAGAAATAGTCAGGATTTGGTAACAAGAAATCAGAATTCTTGGTATAGTCAAGATTTCCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CAA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTATCTAGACAGAGGGGGTaGCGAGGTAGGGAGGAAACT +
Preference number: 5 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLSRQRG*RGREET
Trigger: AGTTTCCTCCCTACCTCGCAACCCCCTCTGTCTAGA...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACTTTGCTCATCTTTCTTaGTGCGGTCAGCATCCAGCC +
Preference number: 5 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHFAHLS*CGQHPA
Trigger: GGCTGGATGCTGACCGCACAAAGAAAGATGAGCAAA...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS CCA 90 bp GAGTCGTACTGGGCTATGAAGAGAGATCCTGCAGCCTCAATGATGTaGCCTGACCTGGGGGTTCTGCAGAAGCCTCACAGCCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: ESYWAMKRDPAASMM*PDLGVLQKPHSLVF
Trigger: GAAGACGAGGCTGTGAGGCTTCTGCAGAACCCCCAGGTCAGGCCACATCATTGAGGCTGCAGGATCTCTCTTCATAGCCCAGTACGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262259.7
ENST00000545217.5
ENST00000596504.1
CDS-3UTR CAA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTAAGGGAGGAAACTAAGTaGTTAAAGCCAACAGGCCCC +
Preference number: 5 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLREETK*LKPTGP
Trigger: GGGGCCTGTTGGCTTTAACAACTTAGTTTCCTCCCT...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACCTGATGCACCTTGAGTaGTGGTTTCTTACTGAACGA +
Preference number: 5 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHLMHLE*WFLTER
Trigger: TCGTTCAGTAAGAAACCACAACTCAAGGTGCATCAG...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CCTTCCTCCCTGAAACTGGTCAGGGTGCCACTCCCAGGACCCAGGTGCACACTACTACACTGGTTACCTTaGCAAAATGTCTCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: PSSLKLVRVPLPGPRCTLLHWLP*QNVSPV
Trigger: TACAGGAGAGACATTTTGCAAAGGTAACCAGTGTAG...TAGTGTGCACCTGGGTCCTGGGAGTGGCACCCTGACCAGTTTCAGGGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp TACTACGCCCCTGGACAGGGAGAGGCCAGTGAGACACAGAACAGATTTGCTCTCCTGATCCCAGGCATTTaGGAGAAGGGATACTCAACC +
Preference number: 5 (lower is better)
Translates to: YYAPGQGEASETQNRFALLIPGI*EKGYST
Trigger: GGTTGAGTATCCCTTCTCCAAAATGCCTGGGATCAG...GAGAGCAAATCTGTTCTGTGTCTCACTGGCCTCTCCCTGTCCAGGGGCGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp ACAGTTAGGGAGGCCCACGTGAGGAGTGAACATGTGGCTGGAGATGAGGACCCAATGAGACCAAATAACTaGCTCAGCAGATGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TVREAHVRSEHVAGDEDPMRPNN*LSRCRG
Trigger: CCCTCTGCATCTGCTGAGCAAGTTATTTGGTCTCAT...TGGGTCCTCATCTCCAGCCACATGTTCACTCCTCACGTGGGCCTCCCTAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTCTTAGAAATCTCCTTTaGTGGGATTTCAAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPLRNLL*WDFKPK
Trigger: TTTGGGCTTGAAATCCCACAAAAGGAGATTTCTAAG...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CCCAGGTGCACACTATTTCCACCCCTCACCACCATGGAGAGGCCTCTGCAGCCTACTGTGACTCATGGGTaGAATTTGATTTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: PRCTLFPPLTTMERPLQPTVTHG*NLILLI
Trigger: GATGAGCAAAATCAAATTCAACCCATGAGTCACAGT...AGGCTGCAGAGGCCTCTCCATGGTGGTGAGGGGTGGAAATAGTGTGCACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CATCTACGGCCGGCCAGCCCTTGTACCTGGACTCCCCAGGTGAGACTCTTCCACAAAGTAGTACAATGGTaGAGAGTTAAAACACTGGCA +
Preference number: 5 (lower is better)
Translates to: HLRPASPCTWTPQVRLFHKVVQW*RVKTLA
Trigger: TGCCAGTGTTTTAACTCTCAACCATTGTACTACTTT...GTGGAAGAGTCTCACCTGGGGAGTCCAGGTACAAGGGCTGGCCGGCCGTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGATTATCCCACAGGCATaGAGTACAGACTGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGIIPQA*STDWLV
Trigger: GACAAGCCAGTCTGTACTCAATGCCTGTGGGATAAT...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGAAAATTCATCAGCACTaGGTCTGTCCATGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGKIHQH*VCPCSS
Trigger: GGAACTGCATGGACAGACCAAGTGCTGATGAATTTT...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATGACTGGGGCTAAGCTGGATAGGTGTTaGGATTTTCCAACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QNQCLAGKSQLFHPMTGAKLDRC*DFPTRD
Trigger: GTCCCTGGTTGGAAAATCCAAACACCTATCCAGCTT...AGCCCCAGTCATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CAA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATTGCACTAGGAATTCATaGCTTGGTAAAGCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHCTRNS*LGKAFH
Trigger: GTGAAAGGCTTTACCAAGCAATGAATTCCTAGTGCA...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp ACCCTCTACTATCCTCTTTTATCAGCCAGTTCATGGTTTCCTCTAGAACACAGACTCTGTGGTCCTCGCTaGACAGGAGGCTCAAGACTG +
Preference number: 5 (lower is better)
Translates to: TLYYPLLSASSWFPLEHRLCGPR*TGGSRL
Trigger: CAGTCTTGAGCCTCCTGTCAAGCGAGGACCACAGAG...TCTGTGTTCTAGAGGAAACCATGAACTGGCTGATAAAAGAGGATAGTAGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CAA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGGTTGGGAGGCCATATTaGGCCAATGGCCACAGTTTG +
Preference number: 5 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMVGRPY*ANGHSL
Trigger: CAAACTGTGGCCATTGGCCAAATATGGCCTCCCAAC...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000436511.2
CDS-3UTR CAA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCCATCCTGAGGGGTCTTaGGAACCAGTGTGTCTACAC +
Preference number: 5 (lower is better)
Translates to: KTLDSSLGPINSKANHPTHPEGS*EPVCLH
Trigger: GTGTAGACACACTGGTTCCAAAGACCCCTCAGGATG...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp TGGCTTTCACTGCCCAACAATAAAAAGGTCATGGGCACTTTGGGAGGCCGAGGGAAATCCAGGCTTTTCTaGTTCCTAGATTTTCGGTCT +
Preference number: 5 (lower is better)
Translates to: WLSLPNNKKVMGTLGGRGKSRLF*FLDFRS
Trigger: AGACCGAAAATCTAGGAACAAGAAAAGCCTGGATTT...CCCTCGGCCTCCCAAAGTGCCCATGACCTTTTTATTGTTGGGCAGTGAAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CCTTATGAGAACAGAGGAAAAACGGGCCAAACCCCATGGACCAAGCAAGGAATTACAGTTTCTTCTTTCTaGACCCAAGGCCAACCCTCT +
Preference number: 5 (lower is better)
Translates to: PYENRGKTGQTPWTKQGITVSSF*TQGQPS
Trigger: AGAGGGTTGGCCTTGGGTCAAGAAAGAAGAAACTGT...AATTCCTTGCTTGGTCCATGGGGTTTGGCCCGTTTTTCCTCTGTTCTCATAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS-3UTR CAA 90 bp CAGAACCAGTGCTTAGCAGGAAAGAGTCAGCTTTTCCATCCTATGACTGGGGCTCAAAGGAAGGAGATTTaGCCGCACCTTATGAGAACA +
Preference number: 5 (lower is better)
Translates to: QNQCLAGKSQLFHPMTGAQRKEI*PHLMRT
Trigger: TGTTCTCATAAGGTGCGGCAAAATCTCCTTCCTTTG...AGCCCCAGTCATAGGATGGAAAAGCTGACTCTTTCCTGCTAAGCACTGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS TCA 90 bp CTCCTGTATGAATATTCTTGCTGCAGGCATCAGAAGAGCTATGGCTaGATAGCTGACCAGACCCAACAACGTCATCAAGCTGTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: LLYEYSCCRHQKSYG*IADQTQQRHQAVLC
Trigger: ACACAGAACAGCTTGATGACGTTGTTGGGTCTGGTCAGCTATTCAGCCATAGCTCTTCTGATGCCTGCAGCAAGAATATTCATACAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS-3UTR CAA 90 bp GCAGGCTCAGGGATACGAGGCCCGCTAAAATTCATCAGCACTTGGTCTGTCCATGTTGTTTGGTGTTTATaGAAGTTTGACCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AGSGIRGPLKFISTWSVHVVWCL*KFDLLL
Trigger: CAACAACAGGTCAAACTTCAATAAACACCAAACAAC...ATGGACAGACCAAGTGCTGATGAATTTTAGCGGGCCTCGTATCCCTGAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGAGACACAGAACAGATTaGCTCTCCAGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMRHRTD*LSRAQH
Trigger: GTGCTGGGCCCTGGAGAGCAAATCTGTTCTGTGTCT...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAAGCTGGATAGGTGTTaGGATTTTCCAACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMKLDRC*DFPTRD
Trigger: GTCCCTGGTTGGAAAATCCAAACACCTATCCAGCTT...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGGGCTTGTCCCAGCGCTaGGTACTGAGAGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMGLSQR*VLRGKK
Trigger: TTTCTTTCCTCTCAGTACCAAGCGCTGGGACAAGCC...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp CAGGTCAACCTCATAGAATACACGTGTGTACAATCCATCATGGATTGTAGAATGTACTGTGCCCAACCTTaGTGCCAATCGCCACAACAG +
Preference number: 5 (lower is better)
Translates to: QVNLIEYTCVQSIMDCRMYCAQP*CQSPQQ
Trigger: CTGTTGTGGCGATTGGCACAAAGGTTGGGCACAGTA...CATTCTACAATCCATGATGGATTGTACACACGTGTATTCTATGAGGTTGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS GCA 90 bp AACATTTCTGAGGTTGTTTCTGTGAAGAAGCAAGGTGGGGCCTCGTaGGAATCATTTTCCCAGGGTCCTTATATTCACAATTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: NISEVVSVKKQGGAS*ESFSQGPYIHNCFL
Trigger: CAGAAAGCAATTGTGAATATAAGGACCCTGGGAAAATGATTCGCACGAGGCCCCACCTTGCTTCTTCACAGAAACAACCTCAGAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS-3UTR CAA 90 bp ACTGGGGCTTCTGATCAGACCAGGGACTACAGTTTCTTCTTTCTTGACCCAAGGGGATTTCAGGAAATCTaGACTATACCAAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: TGASDQTRDYSFFFLDPRGFQEI*TIPRIL
Trigger: CAGAATTCTTGGTATAGTCAAGATTTCCTGAAATCC...CCTTGGGTCAAGAAAGAAGAAACTGTAGTCCCTGGTCTGATCAGAAGCCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS TCA 90 bp ACTTCTAGGTTCAGCTTCAAACTTTCTGTAAATAAGCAACATTTCTaGGGTTGTTTCTGTGAAGAAGCAAGGTGGGGCCTCGTGCGAATC +
Preference number: 5 (lower is better)
Translates to: TSRFSFKLSVNKQHF*GCFCEEARWGLVRI
Trigger: GATTCGCACGAGGCCCCACCTTGCTTCTTCACAGAAACAACCTCAGAAATGTTGCTTATTTACAGAAAGTTTGAAGCTGAACCTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS-3UTR CAA 90 bp AAAACTTTAGATAGCTCCCTGGGACCCATCAATTCCAAAGCTAATCACCCAACCAATGGCCACAGTTTGTaGACTCCTGGTGTAAAAATA +
Preference number: 5 (lower is better)
Translates to: KTLDSSLGPINSKANHPTNGHSL*TPGVKI
Trigger: TATTTTTACACCAGGAGTCAACAAACTGTGGCCATT...GGTTGGGTGATTAGCTTTGGAATTGATGGGTCCCAGGGAGCTATCTAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS-3UTR CAA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGAATGGCCACAGTTTGTaGACTCCTGGTGTAAAAATA +
Preference number: 5 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMNGHSL*TPGVKI
Trigger: TATTTTTACACCAGGAGTCAACAAACTGTGGCCATT...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000436511.2
CDS TCA 90 bp GACCCAACAACGTCATCAAGCTGTTCTGTGTCATTGCTTTCATTCTaGCCGTTCACTTCTAGGTTCAGCTTCAAACTTTCTGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: DPTTSSSCSVSLLSF*PFTSRFSFKLSVNK
Trigger: CTTATTTACAGAAAGTTTGAAGCTGAACCTAGAAGTGAACGGTCAGAATGAAAGCAATGACACAGAACAGCTTGATGACGTTGTTGGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS-3UTR CAA 90 bp GAGGCCATATTTGGCCAATGGCCACAGTTTGTTGACTCCTGGTGTAAAAATATGATACGTACATACAGGTaGGGTATTCCTAATCTGAAA +
Preference number: 5 (lower is better)
Translates to: EAIFGQWPQFVDSWCKNMIRTYR*GIPNLK
Trigger: TTTCAGATTAGGAATACCCAACCTGTATGTACGTAT...CATATTTTTACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262259.7
CDS TCA 90 bp ACATCCATCTGGTTTCTTCTGAGTATGAATTTGATGTTGCTTGAGTaGCTGTTTATGGCCACAGACTTTTCTACACTGGTTACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: TSIWFLLSMNLMLLE*LFMATDFSTLVTFA
Trigger: TGCAAAGGTAACCAGTGTAGAAAAGTCTGTGGCCATAAACAGTCACTCAAGCAACATCAAATTCATACTCAGAAGAAACCAGATGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS TCA 90 bp CAGAACATCCATCTGGTTTCTTCTGAGTATGAATTTGATGTTGCTTaGGTGACTGTTTATGGCCACAGACTTTTCTACACTGGTTACCTT +
Preference number: 5 (lower is better)
Translates to: QNIHLVSSEYEFDVA*VTVYGHRLFYTGYL
Trigger: AAGGTAACCAGTGTAGAAAAGTCTGTGGCCATAAACAGTCACTCAAGCAACATCAAATTCATACTCAGAAGAAACCAGATGGATGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS GCA 72 bp AGGAGCAGGGAGCCCAGACCTGCTGCATCCTGTGTCTaGCCTCACGTTCTGGAGAACTATCCCCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RSREPRPAASCV*PHVLENYPQGC
Trigger: GCAGCCCTGGGGATAGTTCTCCAGAACGTGAGGGCAGACACAGGATGCAGCAGGTCTGGGCTCCCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS CCA 72 bp CCAGACCTGCTGCATCCTGTGTCTGCCCTCACGTTCTaGAGAACTATCCCCAGGGCTGCCCCTGTTTACCTC +
Preference number: 6 (lower is better)
Translates to: PDLLHPVSALTF*RTIPRAAPVYL
Trigger: GAGGTAAACAGGGGCAGCCCTGGGGATAGTTCTCCAGAACGTGAGGGCAGACACAGGATGCAGCAGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545217.5
CDS CCA 72 bp TGGGCTATGAAGAGAGATCCTGCAGCCTCAATGATGTaGCCTGACCTGGGGGTTCTGCAGAAGCCTCACAGC +
Preference number: 6 (lower is better)
Translates to: WAMKRDPAASMM*PDLGVLQKPHS
Trigger: GCTGTGAGGCTTCTGCAGAACCCCCAGGTCAGGCCACATCATTGAGGCTGCAGGATCTCTCTTCATAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262259.7
ENST00000545217.5
ENST00000596504.1
CDS TCA 72 bp TCTCCACTCTGGGCTTCTACTCTCGGTCTCTCTTGCTaGCAACTCCACTTTTCCCAGGAGCCAGAAGCTGGA +
Preference number: 6 (lower is better)
Translates to: SPLWASTLGLSC*QLHFSQEPEAG
Trigger: TCCAGCTTCTGGCTCCTGGGAAAAGTGGAGTTGTCAGCAAGAGAGACCGAGAGTAGAAGCCCAGAGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262259.7
ENST00000545217.5
ENST00000596504.1
CDS CCA 72 bp GGATTTTCCAACCAGGGACACGGCGGAGAGTCGTACTaGGCTATGAAGAGAGATCCTGCAGCCTCAATGATG +
Preference number: 6 (lower is better)
Translates to: GFSNQGHGGESY*AMKRDPAASMM
Trigger: CATCATTGAGGCTGCAGGATCTCTCTTCATAGCCCAGTACGACTCTCCGCCGTGTCCCTGGTTGGAAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262259.7
ENST00000545217.5
ENST00000596504.1
CDS CAA 72 bp TCCACTTTTCCCAGGAGCCAGAAGCTGGATAGGTGTTaGGATTTTCCAACCAGGGACACGGCGGAGAGTCGT +
Preference number: 6 (lower is better)
Translates to: STFPRSQKLDRC*DFPTRDTAESR
Trigger: ACGACTCTCCGCCGTGTCCCTGGTTGGAAAATCCAAACACCTATCCAGCTTCTGGCTCCTGGGAAAAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262259.7
ENST00000545217.5
ENST00000596504.1
CDS TCA 72 bp GAATATTCTTGCTGCAGGCATCAGAAGAGCTATGGCTaGATAGCTGACCAGACCCAACAACGTCATCAAGCT +
Preference number: 6 (lower is better)
Translates to: EYSCCRHQKSYG*IADQTQQRHQA
Trigger: AGCTTGATGACGTTGTTGGGTCTGGTCAGCTATTCAGCCATAGCTCTTCTGATGCCTGCAGCAAGAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS GCA 72 bp GAGGTTGTTTCTGTGAAGAAGCAAGGTGGGGCCTCGTaGGAATCATTTTCCCAGGGTCCTTATATTCACAAT +
Preference number: 6 (lower is better)
Translates to: EVVSVKKQGGAS*ESFSQGPYIHN
Trigger: ATTGTGAATATAAGGACCCTGGGAAAATGATTCGCACGAGGCCCCACCTTGCTTCTTCACAGAAACAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS CAA 90 bp TTTCTTGTTGAAGAAAGCACTGTGACTCATGGGTTGAATTTGATTTaGCTCATCTTTCTTTGTGCGGTCAGCATCCAGCCTCAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: FLVEESTVTHGLNLI*LIFLCAVSIQPQFF
Trigger: GAAGAACTGAGGCTGGATGCTGACCGCACAAAGAAAGATGAGCAAAATCAAATTCAACCCATGAGTCACAGTGCTTTCTTCAACAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS TCA 72 bp TTCAGCTTCAAACTTTCTGTAAATAAGCAACATTTCTaGGGTTGTTTCTGTGAAGAAGCAAGGTGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: FSFKLSVNKQHF*GCFCEEARWGL
Trigger: GAGGCCCCACCTTGCTTCTTCACAGAAACAACCTCAGAAATGTTGCTTATTTACAGAAAGTTTGAAGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1
CDS TCA 72 bp TGGTTTCTTCTGAGTATGAATTTGATGTTGCTTGAGTaGCTGTTTATGGCCACAGACTTTTCTACACTGGTT +
Preference number: 6 (lower is better)
Translates to: WFLLSMNLMLLE*LFMATDFSTLV
Trigger: AACCAGTGTAGAAAAGTCTGTGGCCATAAACAGTCACTCAAGCAACATCAAATTCATACTCAGAAGAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262259.7
ENST00000600460.1