RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF169 (Homo sapiens)

Ensembl gene IDs: ENSG00000175787

Ensembl transcript IDs: ENST00000340911.8, ENST00000395395.7, ENST00000480716.1, ENST00000481550.6, ENST00000492115.2

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGAGAAATCCTGAATGTGCTCGAGAAAGGAAGCCAAGTGAGGAGTaGGGCTCCCTGATGGAGGAAGGAGATGGAATGCCAGGGGTGCCC +
Preference number: 1 (lower is better)
Translates to: WRNPECARERKPSEE*GSLMEEGDGMPGVP
Trigger: GGGCACCCCTGGCATTCCATCTCCTTCCTCCATCAGGGAGCCTCACTCCTCACTTGGCTTCCTTTCTCGAGCACATTCAGGATTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR CCA 90 bp AGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTaGGGAAAACTTGGCTGGAATTCTGTTCTAGGCTCTGCTAGAGAG +
Preference number: 1 (lower is better)
Translates to: SAYCLRSCELEKATR*GKLGWNSVLGSARE
Trigger: CTCTCTAGCAGAGCCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR TCA 90 bp TTATTAAGGTTAAACGAGGCCATGTGGCTGTGGCTCTATCCAAAATaGCTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCAT +
Preference number: 1 (lower is better)
Translates to: LLRLNEAMWLWLYPK*LVSLEEEEATPGKH
Trigger: ATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATGGCCTCGTTTAACCTTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
3UTR CCA 90 bp TCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTaGCATAACTTATATAAGTTGAGGCTATGCATGCCTGTGAACCAG +
Preference number: 1 (lower is better)
Translates to: SCWEHKLPCPLQNTS*HNLYKLRLCMPVNQ
Trigger: CTGGTTCACAGGCATGCATAGCCTCAACTTATATAAGTTATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR GCA 90 bp CAAAGACTTATCTTCCAACCCACAAGGGCACATTACATGCTCTATTaGAGCACAGAAAACCCACACTACAAACTAGTCCTATCAGCCAAA +
Preference number: 1 (lower is better)
Translates to: QRLIFQPTRAHYMLY*STENPHYKLVLSAK
Trigger: TTTGGCTGATAGGACTAGTTTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGAAGATAAGTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR GCA 90 bp AAGTCTTGGTCAGAATCACCACAGGTGACCATGGATTGTAATACCTaGCCAGCAGTTTTCTTCAGATGTTCACAACAAAGACTTATCTTC +
Preference number: 1 (lower is better)
Translates to: KSWSESPQVTMDCNT*PAVFFRCSQQRLIF
Trigger: GAAGATAAGTCTTTGTTGTGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGGTGATTCTGACCAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR GCA 90 bp AGGATGACAGACATGCTTGTTACTTTAGCTGTGGCAGTGCTTTCATaGATGTATACATATGCCAAAACTAACCAAATTTCACACCTATAT +
Preference number: 1 (lower is better)
Translates to: RMTDMLVTLAVAVLS*MYTYAKTNQISHLY
Trigger: ATATAGGTGTGAAATTTGGTTAGTTTTGGCATATGTATACATGCATGAAAGCACTGCCACAGCTAAAGTAACAAGCATGTCTGTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGAGGAGGGCTATCTTCTaGCGAAAGCCTCGCCCACAC +
Preference number: 2 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVRRAIF*RKPRPH
Trigger: GTGTGGGCGAGGCTTTCGCCAGAAGATAGCCCTCCT...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR TCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTAAGCCAAGTGAGGAGTaGGGCTCCCTGATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAIKPSEE*GSLMEE
Trigger: TTCCTCCATCAGGGAGCCTCACTCCTCACTTGGCTT...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR TCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTATGGTCTCGAATTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAIMVSNS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAATTCGAGACCAT...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR TCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTAGCTACTCAGGAGGGTaGGGCAGGAGAAATCACTTG +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAISYSGG*GRRNHL
Trigger: CAAGTGATTTCTCCTGCCTCACCCTCCTGAGTAGCT...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR TCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTGGCAGATGGATTGCCTaGGCTCAGGAATTCAAGACC +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAIGRWIA*AQEFKT
Trigger: GGTCTTGAATTCCTGAGCTCAGGCAATCCATCTGCC...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR TCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTGGCTATGCATGCCTGTaGACCAGCTACTACACACCT +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAIGYACL*TSYYTP
Trigger: AGGTGTGTAGTAGCTGGTTCACAGGCATGCATAGCC...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR GCA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCTTAGGGTACAGGGCTaGCCCAACCCTACTCATTGT +
Preference number: 2 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSLRVQG*PNPTHC
Trigger: ACAATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAG...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR TCA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCTACTGGGTCACCTTaGTGTGGGCTGAAGAATGTC +
Preference number: 2 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHSTGSP*CGLKNV
Trigger: GACATTCTTCAGCCCACATCAAGGTGACCCAGTAGA...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR TCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGGTGCTTGATAAGGTCTaGTCTCTGGCAAAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVVLDKV*SLAKAS
Trigger: AGAGGCTTTTGCCAGAGATCAGACCTTATCAAGCAC...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR CCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGCAGGTGGGGAAAACTTaGCTGGAATTCTGTTCTAGG +
Preference number: 2 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVQVGKT*LEFCSR
Trigger: CCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTG...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR CCA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCTGGGTCACCTTGATGTaGGCTGAAGAATGTCCTAGA +
Preference number: 2 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFWVTLM*AEECPR
Trigger: TCTAGGACATTCTTCAGCCCACATCAAGGTGACCCA...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR CCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTGGGGTTTCACCATGTTaGCCAGAATGGTCTCGAATT +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAIGVSPC*PEWSRI
Trigger: AATTCGAGACCATTCTGGCCAACATGGTGAAACCCC...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR TCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGCAGAATCACCACAGGTaGCCATGGATTGTAATACCT +
Preference number: 2 (lower is better)
Translates to: PLSAYCLRSCELEKATRWQNHHR*PWIVIP
Trigger: AGGTATTACAATCCATGGTCACCTGTGGTGATTCTG...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR TCA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAAGGAGTGAGGCTCCCTaGTGGAGGAAGGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPRSEAP*WRKEME
Trigger: TTCCATCTCCTTCCTCCATCAGGGAGCCTCACTCCT...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR GCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATAGGAAGGAGATGGAATaGCAGGGGTGCCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHRKEME*QGCPVL
Trigger: CAGGACAGGGCACCCCTGGCATTCCATCTCCTTCCT...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR GCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCAAAGGCAGATGGATTaGCTGAGCTCAGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAIQRQMD*LSSGIQ
Trigger: TTGAATTCCTGAGCTCAGGCAATCCATCTGCCTTTG...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR TCA 90 bp GATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAGATGCTCATGCTCACTAATGGTCTCGAATTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: DGETGRAKQHMKRCSCSLMVSNS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAATTCGAGACCAT...TAGTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR GCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGCAAGGGCACATTACATaGTCTATTGCAGCACAGAAA +
Preference number: 2 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVQGHIT*SIAAQK
Trigger: TTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTG...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR GCA 90 bp TTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATGAAACTTAGGGTACAGGGCTaGCCCAACCCTACTCATTGT +
Preference number: 2 (lower is better)
Translates to: LNGQITDGETGRAKQHMKLRVQG*PNPTHC
Trigger: ACAATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAG...TTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR GCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATACCTGGTTTTATAACATaGTATCTCTTAGGGTACAGG +
Preference number: 2 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIPGFIT*YLLGYR
Trigger: CCTGTACCCTAAGAGATAGCATGTTATAAAACCAGG...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGGAAGAACCCATCAGATaGAATAAAAGGATAAAGACA +
Preference number: 2 (lower is better)
Translates to: SQFTATSASRIQAILLPQEEPIR*NKRIKT
Trigger: TGTCTTTATCCTTTTATTCCATCTGATGGGTTCTTC...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR CCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTGAAGAACCCATCAGATaGAATAAAAGGATAAAGACA +
Preference number: 2 (lower is better)
Translates to: AVAQSQFTATSASRIQAIEEPIR*NKRIKT
Trigger: TGTCTTTATCCTTTTATTCCATCTGATGGGTTCTTC...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR TCA 90 bp AAGTATGGGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCGCAGGAGAAATCACTTaGACACAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: KYGAITWFYNMLSLRVQGAGEIT*TQEAEV
Trigger: AACCTCTGCCTCCTGTGTTCAAGTGATTTCTCCTGC...GCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCCCATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR GCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATCAAAGGCAGATGGATTaGCTGAGCTCAGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHQRQMD*LSSGIQ
Trigger: TTGAATTCCTGAGCTCAGGCAATCCATCTGCCTTTG...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR TCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATAGAATGGAGAAATCCTaGATGTGCTCGAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHRMEKS*MCSRKE
Trigger: TTCCTTTCTCGAGCACATTCAGGATTTCTCCATTCT...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR TCA 90 bp GATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAGATGCTCATGCTCACTAAACACCCTATATGAGTaGAGAACCCATCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: DGETGRAKQHMKRCSCSLNTLYE*RTHQME
Trigger: TTCCATCTGATGGGTTCTTCACTCATATAGGGTGTT...TAGTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR GCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATAAGAAGTTTACAGACATaGAAAACAACACCCTATATG +
Preference number: 2 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIRSLQT*KTTPYM
Trigger: CATATAGGGTGTTGTTTTGCATGTCTGTAAACTTCT...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CCA 90 bp TTCTACCCATTCTACTGGGTCACCTTGATGTGGGCTGAAGAATGTCCTAGAAATCTAGAGAGAAAGTCTTaGTCAGAATCACCACAGGTG +
Preference number: 2 (lower is better)
Translates to: FYPFYWVTLMWAEECPRNLERKS*SESPQV
Trigger: CACCTGTGGTGATTCTGACCAAGACTTTCTCTCTAG...ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR CAA 90 bp ACAAAGACTTATCTTCCAACCCACAAGGGCACATTACATGCTCTATaGCAGCACAGAAAACCCACACTACAAACTAGTCCTATCAGCCAA +
Preference number: 2 (lower is better)
Translates to: TKTYLPTHKGTLHAL*QHRKPTLQTSPISQ
Trigger: TTGGCTGATAGGACTAGTTTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGAAGATAAGTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR TCA 90 bp CACCTTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATAAACAACACCCTATATaGGTGAAGAACCCATCAGAT +
Preference number: 2 (lower is better)
Translates to: HLEWSNHRWGNRKGQATYKQHPI*VKNPSD
Trigger: ATCTGATGGGTTCTTCACTCATATAGGGTGTTGTTT...ATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR GCA 90 bp TTCTACCCATTCTACTGGGTCACCTTGATGTGGGCTGAAGAATGTCCTAGAAATATGGATTGTAATACCTaGCCAGCAGTTTTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: FYPFYWVTLMWAEECPRNMDCNT*PAVFFR
Trigger: TCTGAAGAAAACTGCTGGGCAGGTATTACAATCCAT...ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR CCA 90 bp CACCTTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATTATGGGGCTATTACCTaGTTTTATAACATGCTATCT +
Preference number: 2 (lower is better)
Translates to: HLEWSNHRWGNRKGQATYYGAIT*FYNMLS
Trigger: AGATAGCATGTTATAAAACCAGGTAATAGCCCCATA...ATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR TCA 72 bp CTCGAGAAAGGAAGCCAAGTGAGGAGTGAGGCTCCCTaGTGGAGGAAGGAGATGGAATGCCAGGGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: LEKGSQVRSEAP*WRKEMECQGCP
Trigger: AGGGCACCCCTGGCATTCCATCTCCTTCCTCCATCAGGGAGCCTCACTCCTCACTTGGCTTCCTTTCTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR CAA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCCTCCTGCAGATGAGCTaGGGAAGATCTGTGTGGGAT +
Preference number: 3 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFLLQMS*GRSVWD
Trigger: ATCCCACACAGATCTTCCCAAGCTCATCTGCAGGAG...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR CAA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAGCCGAGATCATGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPAEIMP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTCGGC...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR-3UTR CAA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTGGCAGGAGAAATCACTaGAACACAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSGRRNH*NTGGRG
Trigger: ACCTCTGCCTCCTGTGTTCAAGTGATTTCTCCTGCC...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
3UTR CCA 72 bp TGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTaGGGAAAACTTGGCTGGAATTCTGTTCTAGGCTCT +
Preference number: 3 (lower is better)
Translates to: CLRSCELEKATR*GKLGWNSVLGS
Trigger: AGAGCCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR CCA 72 bp TTCAAGCGATTCTCACTCCTCAGCCATCCGAGTAGCTaGTATTTCAGGCATGCACCACCAGGCTCGGCTAAT +
Preference number: 3 (lower is better)
Translates to: FKRFSLLSHPSS*YFRHAPPGSAN
Trigger: ATTAGCCGAGCCTGGTGGTGCATGCCTGAAATACCAGCTACTCGGATGGCTGAGGAGTGAGAATCGCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CAA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATAGCAAAGGCAGATGGATaGCCTGAGCTCAGGAATTCA +
Preference number: 3 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIAKADG*PELRNS
Trigger: TGAATTCCTGAGCTCAGGCAATCCATCTGCCTTTGC...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CAA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTTGTAATCCCAACACTTaGGGAAGCAAAGGCAGATGG +
Preference number: 3 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSCNPNT*GSKGRW
Trigger: CCATCTGCCTTTGCTTCCCAAAGTGTTGGGATTACA...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR CAA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCCCCAACCCTACTCATaGTACAGTTTTTCACACCTT +
Preference number: 3 (lower is better)
Translates to: AVAQSQFTATSASRIQAIPQPYS*YSFSHL
Trigger: AAGGTGTGAAAAACTGTACAATGAGTAGGGTTGGGG...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR TCA 72 bp TTAAACGAGGCCATGTGGCTGTGGCTCTATCCAAAATaGCTGGTGTCCCTAGAAGAGGAGGAAGCCACACCA +
Preference number: 3 (lower is better)
Translates to: LNEAMWLWLYPK*LVSLEEEEATP
Trigger: TGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATGGCCTCGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
3UTR-3UTR CAA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGACATTACATGCTCTATaGCAGCACAGAAAACCCACA +
Preference number: 3 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVTLHAL*QHRKPT
Trigger: TGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGT...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR CAA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATATGTAATCCCAACACTTaGGGAAGCAAAGGCAGATGG +
Preference number: 3 (lower is better)
Translates to: TPAGSISCHAHFRTQVGICNPNT*GSKGRW
Trigger: CCATCTGCCTTTGCTTCCCAAAGTGTTGGGATTACA...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CAA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATACCCCAACCCTACTCATaGTACAGTTTTTCACACCTT +
Preference number: 3 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIPQPYS*YSFSHL
Trigger: AAGGTGTGAAAAACTGTACAATGAGTAGGGTTGGGG...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CAA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATGCAAAGGCAGATGGATaGCCTGAGCTCAGGAATTCA +
Preference number: 3 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHAKADG*PELRNS
Trigger: TGAATTCCTGAGCTCAGGCAATCCATCTGCCTTTGC...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR-3UTR CAA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCATAACTTATATAAGTaGAGGCTATGCATGCCTGTG +
Preference number: 3 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSHNLYK*RLCMPV
Trigger: CACAGGCATGCATAGCCTCAACTTATATAAGTTATG...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR CCA 72 bp TCTCCTTTTTCACTAGAGCATCTTGGAGCTTCTAGTTaGAAGTCACCTCCTGCAGATGAGCTTGGGAAGATC +
Preference number: 3 (lower is better)
Translates to: SPFSLEHLGASS*KSPPADELGKI
Trigger: GATCTTCCCAAGCTCATCTGCAGGAGGTGACTTCCAACTAGAAGCTCCAAGATGCTCTAGTGAAAAAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR TCA 72 bp TCTCTGTTCCCTTCTACCCATTCTACTGGGTCACCTTaGTGTGGGCTGAAGAATGTCCTAGAAATTCTGCTT +
Preference number: 3 (lower is better)
Translates to: SLFPSTHSTGSP*CGLKNVLEILL
Trigger: AAGCAGAATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAAGGGAACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR-3UTR CAA 90 bp GATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAGATGCTCATGCTCACTATCACAATCCCAAATGTaGGTGAGGATGTACAACAAG +
Preference number: 3 (lower is better)
Translates to: DGETGRAKQHMKRCSCSLSQSQM*VRMYNK
Trigger: CTTGTTGTACATCCTCACCAACATTTGGGATTGTGA...TAGTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR GCA 72 bp ATCTTCCAACCCACAAGGGCACATTACATGCTCTATTaGAGCACAGAAAACCCACACTACAAACTAGTCCTA +
Preference number: 3 (lower is better)
Translates to: IFQPTRAHYMLY*STENPHYKLVL
Trigger: TAGGACTAGTTTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR GCA 72 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTaGCCCAACCCTACTCATTGTACAGTTTTTCACACC +
Preference number: 3 (lower is better)
Translates to: WFYNMLSLRVQG*PNPTHCTVFHT
Trigger: GGTGTGAAAAACTGTACAATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR CCA 72 bp GAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTaGCATAACTTATATAAGTTGAGGCTATGCATGCCT +
Preference number: 3 (lower is better)
Translates to: EHKLPCPLQNTS*HNLYKLRLCMP
Trigger: AGGCATGCATAGCCTCAACTTATATAAGTTATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR-3UTR CAA 90 bp CCACAGGTGACCATGGATTGTAATACCTGCCCAGCAGTTTTCTTCAGATGTTCACTTCAGCTCTATAAATaGCTGCAAGTAGAGTTACAC +
Preference number: 3 (lower is better)
Translates to: PQVTMDCNTCPAVFFRCSLQLYK*LQVELH
Trigger: GTGTAACTCTACTTGCAGCAATTTATAGAGCTGAAG...TGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR GCA 72 bp AAAGACTTATCTTCCAACCCACAAGGGCACATTACATaGTCTATTGCAGCACAGAAAACCCACACTACAAAC +
Preference number: 3 (lower is better)
Translates to: KDLSSNPQGHIT*SIAAQKTHTTN
Trigger: GTTTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGAAGATAAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR GCA 72 bp TCAGAATCACCACAGGTGACCATGGATTGTAATACCTaGCCAGCAGTTTTCTTCAGATGTTCACAACAAAGA +
Preference number: 3 (lower is better)
Translates to: SESPQVTMDCNT*PAVFFRCSQQR
Trigger: TCTTTGTTGTGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGGTGATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
3UTR CCA 72 bp CTGCACCTGGCCGGTATATATTTTAAGAGAAACTCTTaGACATGTTCCCAAGGAGGCATACAAGAATACAGA +
Preference number: 3 (lower is better)
Translates to: LHLAGIYFKRNS*TCSQGGIQEYR
Trigger: TCTGTATTCTTGTATGCCTCCTTGGGAACATGTCCAAGAGTTTCTCTTAAAATATATACCGGCCAGGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR GCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTAGCTCCTCACTGCCCTaGACCCTCGCTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AVAQSQFTATSASRIQAISSSLP*TLACPG
Trigger: CCCTGGGCAAGCGAGGGTGCAGGGCAGTGAGGAGCT...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR GCA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTGGGCGCCGCTCCCTTaGTTTTGCTCCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHWAPLP*FCSSSS
Trigger: GCTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCA...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGAGGAGGAGTGACTGCTaGCTGAAGCTACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWRRSDC*LKLRPH
Trigger: GTGTGGGCGTAGCTTCAGGCAGCAGTCACTCCTCCT...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACCGCACCAGGCGACGATaGCGGAACGCGGAAGTACGC +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYRTRRR*RNAEVR
Trigger: GCGTACTTCCGCGTTCCGGCATCGTCGCCTGGTGCG...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGCCTGTGTGTGAGCTCTaGTGCTGGAGGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVPVCEL*CWRSDA
Trigger: GGCATCACTCCTCCAGCACCAGAGCTCACACACAGG...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGTGTCAGGAGTCCTGGTaGCATATCCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWCQESW*HIPALW
Trigger: CCAGAGAGCAGGGATATGTCACCAGGACTCCTGACA...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATCTGGTGCTGGAGGAGTaGTGCCTTCTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHLVLEE*CLLAKA
Trigger: GGCTTTTGCCAGAAGGCATCACTCCTCCAGCACCAG...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGGAGTGTGTGACCTGGTaGCTAAGGAGGAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVECVTW*LRRSDC
Trigger: GCAGTCACTCCTCCTTAGTCACCAGGTCACACACTC...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCGTCACCTCCTGCAGATaGGCTTGGGAAGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFVTSCR*AWEDLC
Trigger: ACACAGATCTTCCCAAGCTCATCTGCAGGAGGTGAC...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCTGGTGCTGGAGGAGTaGTGCCTTCTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSLVLEE*CLLAKA
Trigger: GGCTTTTGCCAGAAGGCATCACTCCTCCAGCACCAG...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATGTGACTAAGGAGGAGTaGCTGCTGCCTGAAGCTACG +
Preference number: 4 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHVTKEE*LLPEAT
Trigger: CGTAGCTTCAGGCAGCAGTCACTCCTCCTTAGTCAC...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGCAAGGTTCGTCGCCTTaGTCCAGCTGTTCGATGAGT +
Preference number: 4 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVQGSSP*SSCSMS
Trigger: ACTCATCGAACAGCTGGAGCAAGGCGACGAACCTTG...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCAAGGTTCGTCGCCTTaGTCCAGCTGTTCGATGAGT +
Preference number: 4 (lower is better)
Translates to: AVAQSQFTATSASRIQAIQGSSP*SSCSMS
Trigger: ACTCATCGAACAGCTGGAGCAAGGCGACGAACCTTG...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR GCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCAGGAGGAGTGACTGCTaGCTGAAGCTACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSRRSDC*LKLRPH
Trigger: GTGTGGGCGTAGCTTCAGGCAGCAGTCACTCCTCCT...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTTAGGGTACAGGGCTaGCCCAACCCTACTCATTGT +
Preference number: 4 (lower is better)
Translates to: AVAQSQFTATSASRIQAILRVQG*PNPTHC
Trigger: ACAATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAG...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR GCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATCCCTGCACCCTCGCTTaGCCAGGGCTTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHPCTLA*PGLPTH
Trigger: GTGAGTGGGAAGCCCTGGGCAAGCGAGGGTGCAGGG...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR CCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACCCCGAGTGCTTCCTCTaGTGTATGGAGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYPECFL*CMEREA
Trigger: GGCCTCCCTCTCCATACACCAGAGGAAGCACTCGGG...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCAGGAGGGCTATCTTCTaGCGAAAGCCTCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSRRAIF*RKPRPH
Trigger: GTGTGGGCGAGGCTTTCGCCAGAAGATAGCCCTCCT...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGCTCATAGACTCCTGCTaGGAGCATAAGCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: SQFTATSASRIQAILLPQLIDSC*EHKLPC
Trigger: GCATGGCAGCTTATGCTCCCAGCAGGAGTCTATGAG...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGGGCTTCCCACTCACCTaGACAAAGGTCCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: SQFTATSASRIQAILLPQGFPLT*TKVQKM
Trigger: CATCTTCTGGACCTTTGTCCAGGTGAGTGGGAAGCC...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR TCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGCTGTACAGGGTCCTCTaGGCAGAACTCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWLYRVL*AELNSF
Trigger: GAAGCTATTGAGTTCTGCTCAGAGGACCCTGTACAG...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGGATGCTTCTGGTGGCTaGACAGGCTTGACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWDASGG*TGLTFC
Trigger: GCAAAAAGTCAAGCCTGTTCAGCCACCAGAAGCATC...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCCTGGTGACATATCCCTaGTCTCTGGAGTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFLVTYP*SLEYSS
Trigger: GGAAGAGTACTCCAGAGAGCAGGGATATGTCACCAG...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGTATTGTCTGAGGAGCTaGGAGCTAGAAAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWYCLRS*ELEKAT
Trigger: GGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATA...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGTTTTGGCGAAAGCTGTaGCCACACTCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWFWRKL*PHSAQT
Trigger: TGTCTGTGCTGAGTGTGGGCACAGCTTTCGCCAAAA...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCAATGCCTCCTTCCTaGTTGTCAGGAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHSMPPS*LSGVLV
Trigger: CACCAGGACTCCTGACAACCAGGAAGGAGGCATTGA...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGTTGGGAAGATCTGTGTaGGATGGCCACTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWLGRSV*DGHLAH
Trigger: ATGCGCTAAGTGGCCATCCCACACAGATCTTCCCAA...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCTGTGAGCTCTGGTGCTaGAGGAGTGATGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSCELWC*RSDAFW
Trigger: CCAGAAGGCATCACTCCTCCAGCACCAGAGCTCACA...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACCCTGTGTGTGAGCTCTaGTGCTGGAGGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYPVCEL*CWRSDA
Trigger: GGCATCACTCCTCCAGCACCAGAGCTCACACACAGG...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGGCTGATGACCAGACTTaGTCCTCCTGTGTCTATGCA +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWADDQT*SSCVYA
Trigger: TGCATAGACACAGGAGGACCAAGTCTGGTCATCAGC...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCAGCCTCTCAAAGTCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSQPLKV*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGACTTTGAGAGGCTG...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR CAA 72 bp GAGCTTCTAGTTGGAAGTCACCTCCTGCAGATGAGCTaGGGAAGATCTGTGTGGGATGGCCACTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: ELLVGSHLLQMS*GRSVWDGHLAH
Trigger: ATGCGCTAAGTGGCCATCCCACACAGATCTTCCCAAGCTCATCTGCAGGAGGTGACTTCCAACTAGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCGTCACCTCCTGCAGATaGGCTTGGGAAGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSVTSCR*AWEDLC
Trigger: ACACAGATCTTCCCAAGCTCATCTGCAGGAGGTGAC...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACGTGACTAAGGAGGAGTaGCTGCTGCCTGAAGCTACG +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYVTKEE*LLPEAT
Trigger: CGTAGCTTCAGGCAGCAGTCACTCCTCCTTAGTCAC...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGCTGTGTCTATGCAAGTaGGACTTCTGGCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVLCLCK*DFWLKP
Trigger: TGGCTTTAGCCAGAAGTCTCACTTGCATAGACACAG...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTGCAGGAGAAATCACTTaGACACAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSAGEIT*TQEAEV
Trigger: AACCTCTGCCTCCTGTGTTCAAGTGATTTCTCCTGC...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGGGGCCAAGCAACATATaGAAAGATGCTCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: SQFTATSASRIQAILLPQGPSNI*KDAHAH
Trigger: GTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCC...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCAAGGTTCGTCGCCTTaGTCCAGCTGTTCGATGAGT +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSQGSSP*SSCSMS
Trigger: ACTCATCGAACAGCTGGAGCAAGGCGACGAACCTTG...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATACAAGGTTCGTCGCCTTaGTCCAGCTGTTCGATGAGT +
Preference number: 4 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIQGSSP*SSCSMS
Trigger: ACTCATCGAACAGCTGGAGCAAGGCGACGAACCTTG...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCGACTTAAAGCCAAATaGACGCCCACACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSRLKAK*TPTLGA
Trigger: TGCCCCAAGTGTGGGCGTGCATTTGGCTTTAAGTCG...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGACTTGGTGTCTGAGCTaGACAAAGGTCCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWTWCLS*TKVQKM
Trigger: CATCTTCTGGACCTTTGTCCAGCTCAGACACCAAGT...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCCAAGAGCCAAGAACTTaGTGTCTGAGCTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFQEPRT*CLSWTK
Trigger: CTTTGTCCAGCTCAGACACCAAGTTCTTGGCTCTTG...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGCTTGGAGCTTCTAGTTaGAAGTCACCTCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWLGASS*KSPPAD
Trigger: ATCTGCAGGAGGTGACTTCCAACTAGAAGCTCCAAG...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGATAAGGTCTGATCTCTaGCAAAAGCCTCTCCCGCAT +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWIRSDL*QKPLPH
Trigger: ATGCGGGAGAGGCTTTTGCCAGAGATCAGACCTTAT...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCACAGGTGACCATGGATTGTAATACCTGCCCAGCAGTTTTCTTCAGATGTTCAGAGAGGGAGGCCTTCTaGCTAAACCGACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: PQVTMDCNTCPAVFFRCSEREAF*LNRRPH
Trigger: GTGTGGGCGTCGGTTTAGCCAGAAGGCCTCCCTCTC...TGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCACAGGTGACCATGGATTGTAATACCTGCCCAGCAGTTTTCTTCAGATGTTCACCCGAGTGCTTCCTCTaGTGTATGGAGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PQVTMDCNTCPAVFFRCSPECFL*CMEREA
Trigger: GGCCTCCCTCTCCATACACCAGAGGAAGCACTCGGG...TGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTGTGTGTGAGCTCTGGTaGTGGAGGAGTGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTVCELW*WRSDAF
Trigger: GAAGGCATCACTCCTCCAGCACCAGAGCTCACACAC...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGCAAAGGCAGATGGATTaGCTGAGCTCAGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: SQFTATSASRIQAILLPQQRQMD*LSSGIQ
Trigger: TTGAATTCCTGAGCTCAGGCAATCCATCTGCCTTTG...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CCA 90 bp CAGCCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAGAGAGGGAGGCCTTCTaGCTAAACCGACGCCCACAC +
Preference number: 4 (lower is better)
Translates to: QPNLPIRSSGTSSLHKYEEREAF*LNRRPH
Trigger: GTGTGGGCGTCGGTTTAGCCAGAAGGCCTCCCTCTC...TTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTTGTGAGCTCTGGTGCTaGAGGAGTGATGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTCELWC*RSDAFW
Trigger: CCAGAAGGCATCACTCCTCCAGCACCAGAGCTCACA...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTGGGGTTTCACCATGTTaGCCAGAATGGTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSGVSPC*PEWSRI
Trigger: AATTCGAGACCATTCTGGCCAACATGGTGAAACCCC...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACTCTACTGGGTCACCTTaGTGTGGGCTGAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYSTGSP*CGLKNV
Trigger: GACATTCTTCAGCCCACATCAAGGTGACCCAGTAGA...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTGAGAGGATGTATACCTaGAGTGTCGCCCACATTCCC +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTERMYT*SVAHIP
Trigger: GGGAATGTGGGCGACACTTCAGGTATACATCCTCTC...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACGTCAGAGATAAGGTGTaGCTTCTGGCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYVRDKV*LLAKSL
Trigger: CAAGGACTTGGCCAGAAGTCACACCTTATCTCTGAC...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCTGGCTCTATCCAAAATaGCTGGTGTCCCTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSWLYPK*LVSLEE
Trigger: CTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCA...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGAGAATGGAGAAATCCTaGATGTGCTCGAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SQFTATSASRIQAILLPQRMEKS*MCSRKE
Trigger: TTCCTTTCTCGAGCACATTCAGGATTTCTCCATTCT...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR GCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGTTTTGGTTTGGAAAATaGAATTCCCAGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWFWFGK*NSQGDQ
Trigger: CTGGTCTCCCTGGGAATTGCATTTTCCAAACCAAAA...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGCAAGGGCACATTACATaGTCTATTGCAGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: PLSAYCLRSCELEKATRWQGHIT*SIAAQK
Trigger: TTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTG...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAACTAAGGAGGAGTGACTaGTGCCTGAAGCTACGCCCA +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQLRRSD*CLKLRP
Trigger: TGGGCGTAGCTTCAGGCAGCAGTCACTCCTCCTTAG...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATAAGGCGTGAGCCACTGTaGCCACCCCATTTTTATATA +
Preference number: 4 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIRREPL*PPHFYI
Trigger: TATATAAAAATGGGGTGGGCACAGTGGCTCACGCCT...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCAGGAAGGAGATGGAATaGCAGGGGTGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSRKEME*QGCPVL
Trigger: CAGGACAGGGCACCCCTGGCATTCCATCTCCTTCCT...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR CCA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATCTAGAGAGAAAGTCTTaGTCAGAATCACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHLERKS*SESPQV
Trigger: CACCTGTGGTGATTCTGACCAAGACTTTCTCTCTAG...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCTGGGTCACCTTGATGTaGGCTGAAGAATGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSWVTLM*AEECPR
Trigger: TCTAGGACATTCTTCAGCCCACATCAAGGTGACCCA...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TTCTACCCATTCTACTGGGTCACCTTGATGTGGGCTGAAGAATGTCCTAGAAATAGGAGGGCTATCTTCTaGCGAAAGCCTCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: FYPFYWVTLMWAEECPRNRRAIF*RKPRPH
Trigger: GTGTGGGCGAGGCTTTCGCCAGAAGATAGCCCTCCT...ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACATGAGAGTGACCTTTTaGCGAAAGCTGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYMRVTF*RKLCPH
Trigger: GTGTGGGCACAGCTTTCGCCAAAAGGTCACTCTCAT...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGTTTAAGAGAAACTCTTaGACATGTTCCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SQFTATSASRIQAILLPQFKRNS*TCSQGG
Trigger: GCCTCCTTGGGAACATGTCCAAGAGTTTCTCTTAAA...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp CAGCCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAATGTCAGGAGTCCTGGTaGCATATCCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPNLPIRSSGTSSLHKYECQESW*HIPALW
Trigger: CCAGAGAGCAGGGATATGTCACCAGGACTCCTGACA...TTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCTGTCAGGAGTCCTGGTaGCATATCCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSCQESW*HIPALW
Trigger: CCAGAGAGCAGGGATATGTCACCAGGACTCCTGACA...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR TCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTGACTGCTCCAGATTCTaGAGTGTCTGCTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTDCSRF*SVCSLQ
Trigger: TTGAAGGGAGCAGACACTTCAGAATCTGGAGCAGTC...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAACATTCAGGGCACACATaGTGCTTCTGGTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQHSGHT*CFWWLN
Trigger: GTTCAGCCACCAGAAGCATCATGTGTGCCCTGAATG...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACCTGTGTCTATGCAAGTaGGACTTCTGGCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYLCLCK*DFWLKP
Trigger: TGGCTTTAGCCAGAAGTCTCACTTGCATAGACACAG...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATAGCTACTCAGGAGGGTaGGGCAGGAGAAATCACTTG +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHSYSGG*GRRNHL
Trigger: CAAGTGATTTCTCCTGCCTCACCCTCCTGAGTAGCT...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATGGCAGATGGATTGCCTaGGCTCAGGAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHGRWIA*AQEFKT
Trigger: GGTCTTGAATTCCTGAGCTCAGGCAATCCATCTGCC...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCATGGTCTCGAATTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSMVSNS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAATTCGAGACCAT...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR TCA 90 bp GATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAGATGCTCATGCTCACTAGGCTATGCATGCCTGTaGACCAGCTACTACACACCT +
Preference number: 4 (lower is better)
Translates to: DGETGRAKQHMKRCSCSLGYACL*TSYYTP
Trigger: AGGTGTGTAGTAGCTGGTTCACAGGCATGCATAGCC...TAGTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR TCA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCAGGAGTGAGGCTCCCTaGTGGAGGAAGGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSRSEAP*WRKEME
Trigger: TTCCATCTCCTTCCTCCATCAGGGAGCCTCACTCCT...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR TCA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCAAGCCAAGTGAGGAGTaGGGCTCCCTGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSKPSEE*GSLMEE
Trigger: TTCCTCCATCAGGGAGCCTCACTCCTCACTTGGCTT...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR GCA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCACTGGTGACATATCCCTaGTCTCTGGAGTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPLVTYP*SLEYSS
Trigger: GGAAGAGTACTCCAGAGAGCAGGGATATGTCACCAG...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR GCA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCATGGATTGTAATACCTaGCCAGCAGTTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFMDCNT*PAVFFR
Trigger: TCTGAAGAAAACTGCTGGGCAGGTATTACAATCCAT...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp CCACAGGTGACCATGGATTGTAATACCTGCCCAGCAGTTTTCTTCAGATGTTCACGACTTAAAGCCAAATaGACGCCCACACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PQVTMDCNTCPAVFFRCSRLKAK*TPTLGA
Trigger: TGCCCCAAGTGTGGGCGTGCATTTGGCTTTAAGTCG...TGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATTCAATGCCTCCTTCCTaGTTGTCAGGAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHSMPPS*LSGVLV
Trigger: CACCAGGACTCCTGACAACCAGGAAGGAGGCATTGA...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACCAGGTGGGGAAAACTTaGCTGGAATTCTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYQVGKT*LEFCSR
Trigger: CCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTG...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACCTTGGAGCTTCTAGTTaGAAGTCACCTCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYLGASS*KSPPAD
Trigger: ATCTGCAGGAGGTGACTTCCAACTAGAAGCTCCAAG...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAACCAAGACTCATCCTTTaGGCCAGGCGAAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQPRLIL*ARRRSV
Trigger: AACAGACCTTCGCCTGGCCCAAAGGATGAGTCTTGG...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCACAGGTGACCATGGATTGTAATACCTGCCCAGCAGTTTTCTTCAGATGTTCATCCAAGTGCGTCCTCTaGTGTAGAAGGAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: PQVTMDCNTCPAVFFRCSSKCVL*CRRRAI
Trigger: GATAGCCCTCCTTCTACACCAGAGGACGCACTTGGA...TGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAAAGGAGTGATGCCTTCTaGCAAAAGCCTCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQRSDAF*QKPLPH
Trigger: GTGTGGGAGAGGCTTTTGCCAGAAGGCATCACTCCT...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp TCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCACACCAGGAAAGCATACATAAGGTGTGACTTCTaGCCAAGTCCTTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: SKMTGVPRRGGSHTRKAYIRCDF*PSPCPH
Trigger: GTGTGGACAAGGACTTGGCCAGAAGTCACACCTTAT...GTATGCTTTCCTGGTGTGGCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp AAGTATGGGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGTCAGGAGTCCTGGTaGCATATCCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KYGAITWFYNMLSLRVQGCQESW*HIPALW
Trigger: CCAGAGAGCAGGGATATGTCACCAGGACTCCTGACA...GCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCCCATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAATCTACTGGGTCACCTTaGTGTGGGCTGAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQSTGSP*CGLKNV
Trigger: GACATTCTTCAGCCCACATCAAGGTGACCCAGTAGA...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATGCAGGAGAAATCACTTaGACACAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHAGEIT*TQEAEV
Trigger: AACCTCTGCCTCCTGTGTTCAAGTGATTTCTCCTGC...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATAAACACCCTATATGAGTaGAGAACCCATCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: TPAGSISCHAHFRTQVGINTLYE*RTHQME
Trigger: TTCCATCTGATGGGTTCTTCACTCATATAGGGTGTT...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCTTTTGGTTTGGAAAATaGAATTCCCAGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSFWFGK*NSQGDQ
Trigger: CTGGTCTCCCTGGGAATTGCATTTTCCAAACCAAAA...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATATTTTGGTTTGGAAAATaGAATTCCCAGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIFWFGK*NSQGDQ
Trigger: CTGGTCTCCCTGGGAATTGCATTTTCCAAACCAAAA...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTTCGGCCTGCTGTTTATaGAAGAGCCAAGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTSACCL*KSQELG
Trigger: ACCAAGTTCTTGGCTCTTGCATAAACAGCAGGCCGA...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp GATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAGATGCTCATGCTCACTAGTGATCTCAGTTCATTaGAACCTTCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DGETGRAKQHMKRCSCSLVISVH*NLRLPG
Trigger: ACCTGGGAGGCGAAGGTTGCAATGAACTGAGATCAC...TAGTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CCA 90 bp CAGCCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAATCAATGCCTCCTTCCTaGTTGTCAGGAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QPNLPIRSSGTSSLHKYESMPPS*LSGVLV
Trigger: CACCAGGACTCCTGACAACCAGGAAGGAGGCATTGA...TTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCTCAATGCCTCCTTCCTaGTTGTCAGGAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSSMPPS*LSGVLV
Trigger: CACCAGGACTCCTGACAACCAGGAAGGAGGCATTGA...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR CCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTCAGGTGGGGAAAACTTaGCTGGAATTCTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTQVGKT*LEFCSR
Trigger: CCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTG...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAAGAAAAGGCCACCAGGTaGGGAAAACTTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQEKATR*GKLGWN
Trigger: ATTCCAGCCAAGTTTTCCCCACCTGGTGGCCTTTTC...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTTGGGTCACCTTGATGTaGGCTGAAGAATGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTWVTLM*AEECPR
Trigger: TCTAGGACATTCTTCAGCCCACATCAAGGTGACCCA...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTTTCTACCCATTCTACTaGGTCACCTTGATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTFYPFY*VTLMWA
Trigger: AGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp CCACAGGTGACCATGGATTGTAATACCTGCCCAGCAGTTTTCTTCAGATGTTCAATGAGAGTGACCTTTTaGCGAAAGCTGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: PQVTMDCNTCPAVFFRCSMRVTF*RKLCPH
Trigger: GTGTGGGCACAGCTTTCGCCAAAAGGTCACTCTCAT...TGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTATAAGGTGTGACTTCTaGCCAAGTCCTTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTIRCDF*PSPCPH
Trigger: GTGTGGACAAGGACTTGGCCAGAAGTCACACCTTAT...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CCA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTTTCCAGCTGAATAGATaGATAAAACATGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: AVAQSQFTATSASRIQAIFQLNR*IKHEVS
Trigger: TGAGACCTCATGTTTTATCCATCTATTCAGCTGGAA...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR TCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAAGTGCTTGATAAGGTCTaGTCTCTGGCAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQVLDKV*SLAKAS
Trigger: AGAGGCTTTTGCCAGAGATCAGACCTTATCAAGCAC...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATGAGTGTGTGACCTGGTaGCTAAGGAGGAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENECVTW*LRRSDC
Trigger: GCAGTCACTCCTCCTTAGTCACCAGGTCACACACTC...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp TTCTACCCATTCTACTGGGTCACCTTGATGTGGGCTGAAGAATGTCCTAGAAATGTCAGAGATAAGGTGTaGCTTCTGGCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FYPFYWVTLMWAEECPRNVRDKV*LLAKSL
Trigger: CAAGGACTTGGCCAGAAGTCACACCTTATCTCTGAC...ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAATCATGCCAACCACATaGGCCCAAGAATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPIMPTT*AQEWRN
Trigger: ATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGAT...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR GCA 90 bp TTCTACCCATTCTACTGGGTCACCTTGATGTGGGCTGAAGAATGTCCTAGAAATAGAGGAGAGTCAAGTTaGAGAGGCAAATCACGCACC +
Preference number: 4 (lower is better)
Translates to: FYPFYWVTLMWAEECPRNRGESS*RGKSRT
Trigger: GGTGCGTGATTTGCCTCTGCAACTTGACTCTCCTCT...ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp CAGCCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAGAGGAGAGTCAAGTTaGAGAGGCAAATCACGCACC +
Preference number: 4 (lower is better)
Translates to: QPNLPIRSSGTSSLHKYERGESS*RGKSRT
Trigger: GGTGCGTGATTTGCCTCTGCAACTTGACTCTCCTCT...TTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGAGAAGTTTACAGACATaGAAAACAACACCCTATATG +
Preference number: 4 (lower is better)
Translates to: SQFTATSASRIQAILLPQRSLQT*KTTPYM
Trigger: CATATAGGGTGTTGTTTTGCATGTCTGTAAACTTCT...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CCA 90 bp CAGCCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAGCTGATGACCAGACTTaGTCCTCCTGTGTCTATGCA +
Preference number: 4 (lower is better)
Translates to: QPNLPIRSSGTSSLHKYEADDQT*SSCVYA
Trigger: TGCATAGACACAGGAGGACCAAGTCTGGTCATCAGC...TTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp GATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAGATGCTCATGCTCACTAGACAGAACGAGACTCTaGACAAAGGTCCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: DGETGRAKQHMKRCSCSLDRTRL*TKVQKM
Trigger: CATCTTCTGGACCTTTGTCCAGAGTCTCGTTCTGTC...TAGTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CCA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCAATCAGGAAAAGTATaGGGCTATTACCTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSQSGKV*GYYLVL
Trigger: TAAAACCAGGTAATAGCCCCATACTTTTCCTGATTG...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CCA 90 bp AAGTATGGGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCAGCCTTTACCAGTaGCCTAGGAGGCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: KYGAITWFYNMLSLRVQGCSLYQ*PRRPEE
Trigger: TTCTTCAGGCCTCCTAGGCCACTGGTAAAGGCTGCA...GCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCCCATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR TCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATCATTCAGGGCACACATaGTGCTTCTGGTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENHSGHT*CFWWLN
Trigger: GTTCAGCCACCAGAAGCATCATGTGTGCCCTGAATG...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATGAGAGGATGTATACCTaGAGTGTCGCCCACATTCCC +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENERMYT*SVAHIP
Trigger: GGGAATGTGGGCGACACTTCAGGTATACATCCTCTC...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCATTTTGGTTTGGAAAATaGAATTCCCAGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPFWFGK*NSQGDQ
Trigger: CTGGTCTCCCTGGGAATTGCATTTTCCAAACCAAAA...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR GCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAATTTACTAGTGATTTCTaGCAGCTTCACACTCACGGG +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQFTSDF*QLHTHG
Trigger: CCCGTGAGTGTGAAGCTGGCAGAAATCACTAGTAAA...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp TTCTACCCATTCTACTGGGTCACCTTGATGTGGGCTGAAGAATGTCCTAGAAATCAGAATCACCACAGGTaGCCATGGATTGTAATACCT +
Preference number: 4 (lower is better)
Translates to: FYPFYWVTLMWAEECPRNQNHHR*PWIVIP
Trigger: AGGTATTACAATCCATGGTCACCTGTGGTGATTCTG...ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATAACACCCTATATGAGTaGAGAACCCATCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHNTLYE*RTHQME
Trigger: TTCCATCTGATGGGTTCTTCACTCATATAGGGTGTT...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAAAACAACACCCTATATaGGTGAAGAACCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPKQHPI*VKNPSD
Trigger: ATCTGATGGGTTCTTCACTCATATAGGGTGTTGTTT...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR TCA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAATAATTATAGAAAGCTaGTCAGTGGTTGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPIIIES*SVVAQV
Trigger: TACCTGGGCAACCACTGATCAGCTTTCTATAATTAT...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATCTGGTGACATATCCCTaGTCTCTGGAGTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENLVTYP*SLEYSS
Trigger: GGAAGAGTACTCCAGAGAGCAGGGATATGTCACCAG...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAACATTACATGCTCTATTaGAGCACAGAAAACCCACAC +
Preference number: 4 (lower is better)
Translates to: THKGTLHALLQHRKPTLQHYMLY*STENPH
Trigger: GTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATG...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp TACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTGTGTGTGTGAGCTCTGGTaGTGGAGGAGTGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: YVHLGLPASINMKIYFRCVCELW*WRSDAF
Trigger: GAAGGCATCACTCCTCCAGCACCAGAGCTCACACAC...ACAACGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp TACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTGTCTAAGGAGGAGTGACTaGTGCCTGAAGCTACGCCCA +
Preference number: 4 (lower is better)
Translates to: YVHLGLPASINMKIYFRCLRRSD*CLKLRP
Trigger: TGGGCGTAGCTTCAGGCAGCAGTCACTCCTCCTTAG...ACAACGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp CAGCCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAATTTACTAGTGATTTCTaGCAGCTTCACACTCACGGG +
Preference number: 4 (lower is better)
Translates to: QPNLPIRSSGTSSLHKYEFTSDF*QLHTHG
Trigger: CCCGTGAGTGTGAAGCTGGCAGAAATCACTAGTAAA...TTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATAATGAAAAGATGCTCATaGTCACTAGTAAGCAACTTA +
Preference number: 4 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIMKRCS*SLVSNL
Trigger: TAAGTTGCTTACTAGTGAGCATGAGCATCTTTTCAT...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp GGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAGTGGCAGTGCTTTCATaGATGTATACATATGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLLPGFITCYLLGYRAAPVAVLS*MYTYAK
Trigger: TTTGGCATATGTATACATGCATGAAAGCACTGCCAC...TGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CCA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTCCAAGTGCGTCCTCTaGTGTAGAAGGAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPSKCVL*CRRRAI
Trigger: GATAGCCCTCCTTCTACACCAGAGGACGCACTTGGA...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATATATGGGGCTATTACCTaGTTTTATAACATGCTATCT +
Preference number: 4 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIYGAIT*FYNMLS
Trigger: AGATAGCATGTTATAAAACCAGGTAATAGCCCCATA...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CCA 90 bp ACTCCTGCTGGGAGCATAAGCTGCCATGCCCACTTCAGAACACAAGTTGGCATAGAAGAACCCATCAGATaGAATAAAAGGATAAAGACA +
Preference number: 4 (lower is better)
Translates to: TPAGSISCHAHFRTQVGIEEPIR*NKRIKT
Trigger: TGTCTTTATCCTTTTATTCCATCTGATGGGTTCTTC...TATGCCAACTTGTGTTCTGAAGTGGGCATGGCAGCTTATGCTCCCAGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATTTTAAGAGAAACTCTTaGACATGTTCCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHFKRNS*TCSQGG
Trigger: GCCTCCTTGGGAACATGTCCAAGAGTTTCTCTTAAA...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CCA 90 bp AAGTATGGGGCTATTACCTGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCGGGGTTTCACCATGTTaGCCAGAATGGTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: KYGAITWFYNMLSLRVQGGVSPC*PEWSRI
Trigger: AATTCGAGACCATTCTGGCCAACATGGTGAAACCCC...GCCCTGTACCCTAAGAGATAGCATGTTATAAAACCAGGTAATAGCCCCATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
3UTR CAA 72 bp TATCTTCCAACCCACAAGGGCACATTACATGCTCTATaGCAGCACAGAAAACCCACACTACAAACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: YLPTHKGTLHAL*QHRKPTLQTSP
Trigger: AGGACTAGTTTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGGACTGCTCCAGATTCTaGAGTGTCTGCTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPDCSRF*SVCSLQ
Trigger: TTGAAGGGAGCAGACACTTCAGAATCTGGAGCAGTC...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp TTCTACCCATTCTACTGGGTCACCTTGATGTGGGCTGAAGAATGTCCTAGAAATTATAGTTTCCACGTATaGCTGCTCCAGATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FYPFYWVTLMWAEECPRNYSFHV*LLQILK
Trigger: CTTCAGAATCTGGAGCAGTCATACGTGGAAACTATA...ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR TCA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGGATGCTTCTGGTGGCTaGACAGGCTTGACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPDASGG*TGLTFC
Trigger: GCAAAAAGTCAAGCCTGTTCAGCCACCAGAAGCATC...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATGTGCTTGATAAGGTCTaGTCTCTGGCAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENVLDKV*SLAKAS
Trigger: AGAGGCTTTTGCCAGAGATCAGACCTTATCAAGCAC...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTTTGGCGAAAGCTGTaGCCACACTCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPFWRKL*PHSAQT
Trigger: TGTCTGTGCTGAGTGTGGGCACAGCTTTCGCCAAAA...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR GCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATCCTGGTTTTATAACATaGTATCTCTTAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHPGFIT*YLLGYR
Trigger: CCTGTACCCTAAGAGATAGCATGTTATAAAACCAGG...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CCA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGGAAAAGGCCACCAGGTaGGGAAAACTTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPEKATR*GKLGWN
Trigger: ATTCCAGCCAAGTTTTCCCCACCTGGTGGCCTTTTC...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATTTCTACCCATTCTACTaGGTCACCTTGATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENFYPFY*VTLMWA
Trigger: AGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAA...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTGTCCAAGACTCATCCTTTaGGCCAGGCGAAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: YVHLGLPASINMKIYFRCPRLIL*ARRRSV
Trigger: AACAGACCTTCGCCTGGCCCAAAGGATGAGTCTTGG...ACAACGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATAAGGTCTGATCTCTaGCAAAAGCCTCTCCCGCAT +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENIRSDL*QKPLPH
Trigger: ATGCGGGAGAGGCTTTTGCCAGAGATCAGACCTTAT...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTGTAGGAGTGATGCCTTCTaGCAAAAGCCTCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: YVHLGLPASINMKIYFRCRSDAF*QKPLPH
Trigger: GTGTGGGAGAGGCTTTTGCCAGAAGGCATCACTCCT...ACAACGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
3UTR CAA 72 bp CCACTTCAGAACACAAGTTGGCATAACTTATATAAGTaGAGGCTATGCATGCCTGTGAACCAGCTACTACAC +
Preference number: 4 (lower is better)
Translates to: PLQNTSWHNLYK*RLCMPVNQLLH
Trigger: GTGTAGTAGCTGGTTCACAGGCATGCATAGCCTCAACTTATATAAGTTATGCCAACTTGTGTTCTGAAGTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR TCA 90 bp CACCTTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATAATACTTATGCTGAGTaGAGAATCCAGTTGTATCCT +
Preference number: 4 (lower is better)
Translates to: HLEWSNHRWGNRKGQATYNTYAE*RIQLYP
Trigger: AGGATACAACTGGATTCTTCACTCAGCATAAGTATT...ATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp CCACAGGTGACCATGGATTGTAATACCTGCCCAGCAGTTTTCTTCAGATGTTCAAAGCCTATTAAACCTTaGCTGAGAAACATTTGTTCG +
Preference number: 4 (lower is better)
Translates to: PQVTMDCNTCPAVFFRCSKPIKP*LRNICS
Trigger: CGAACAAATGTTTCTCAGGCAAGGTTTAATAGGCTT...TGAACATCTGAAGAAAACTGCTGGGCAGGTATTACAATCCATGGTCACCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR GCA 90 bp TACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTGTTATTGTCTGAGGAGCTaGGAGCTAGAAAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: YVHLGLPASINMKIYFRCYCLRS*ELEKAT
Trigger: GGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATA...ACAACGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp TACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTGTTTGGGAAGATCTGTGTaGGATGGCCACTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: YVHLGLPASINMKIYFRCLGRSV*DGHLAH
Trigger: ATGCGCTAAGTGGCCATCCCACACAGATCTTCCCAA...ACAACGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATTTAAACGAGGCCATGTaGCTGTGGCTCTATCCAAAA +
Preference number: 4 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENLNEAM*LWLYPK
Trigger: TTTTGGATAGAGCCACAGCCACATGGCCTCGTTTAA...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp TTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAAACAACACCCTATATaGGTGAAGAACCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: LNGQITDGETGRAKQHMKKQHPI*VKNPSD
Trigger: ATCTGATGGGTTCTTCACTCATATAGGGTGTTGTTT...TTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR GCA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATAGAAGTTTACAGACATaGAAAACAACACCCTATATG +
Preference number: 4 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHRSLQT*KTTPYM
Trigger: CATATAGGGTGTTGTTTTGCATGTCTGTAAACTTCT...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CCA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTCTGTTCTAGGCTCTaGACAAAGGTCCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPFCSRL*TKVQKM
Trigger: CATCTTCTGGACCTTTGTCCAGAGCCTAGAACAGAA...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR TCA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTATAGTTTCCACGTATaGCTGCTCCAGATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPYSFHV*LLQILK
Trigger: CTTCAGAATCTGGAGCAGTCATACGTGGAAACTATA...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CCA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCTATGGGGCTATTACCTaGTTTTATAACATGCTATCT +
Preference number: 4 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSYGAIT*FYNMLS
Trigger: AGATAGCATGTTATAAAACCAGGTAATAGCCCCATA...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR CCA 90 bp TTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATGAAACAATCAGGAAAAGTATaGGGCTATTACCTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: LNGQITDGETGRAKQHMKQSGKV*GYYLVL
Trigger: TAAAACCAGGTAATAGCCCCATACTTTTCCTGATTG...TTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480716.1
3UTR CAA 72 bp AGATGGATAAAACATGAGGTCTCACAATCCCAAATGTaGGTGAGGATGTACAACAAGAATTCTCATAGACTC +
Preference number: 4 (lower is better)
Translates to: RWIKHEVSQSQM*VRMYNKNSHRL
Trigger: GAGTCTATGAGAATTCTTGTTGTACATCCTCACCAACATTTGGGATTGTGAGACCTCATGTTTTATCCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp GGCCAAGTCCTTGTCCACACACCCTGTCTACGTAAAGCTCCTCCTCTGAGTGTGCCCAAGACTCATCCTTaGGGCCAGGCGAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GQVLVHTPCLRKAPPLSVPKTHP*GQAKVC
Trigger: ACAGACCTTCGCCTGGCCCAAAGGATGAGTCTTGGG...CACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCATGCCTCCTTCCTGGTaGTCAGGAGTCCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFMPPSW*SGVLVT
Trigger: TGTCACCAGGACTCCTGACAACCAGGAAGGAGGCAT...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGATGCCTCCTTCCTGGTaGTCAGGAGTCCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: SQFTATSASRIQAILLPQMPPSW*SGVLVT
Trigger: TGTCACCAGGACTCCTGACAACCAGGAAGGAGGCAT...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS TCA 90 bp CCGGAAGGCCATCAATGCCTCCTTCCTGGTTGTCAGGAGTCCTGGTaGCATATCCCTGCTCTCTGGAGTACTCTTCCTAGAGGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: PEGHQCLLPGCQESW*HIPALWSTLPRGES
Trigger: TGACTCTCCTCTAGGAAGAGTACTCCAGAGAGCAGGGATATGTCACCAGGACTCCTGACAACCAGGAAGGAGGCATTGATGGCCTTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340911.8
ENST00000395395.7
ENST00000480716.1
ENST00000481550.6
ENST00000492115.2
CDS-3UTR CAA 90 bp AGGTACTGTTTTGAAGATCATGCCAACCACATGAGCCCAAGAATGGAGAAATCCGCCCTGCACCCTCGCTaGCCCAGGGCTTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: RYCFEDHANHMSPRMEKSALHPR*PRASHS
Trigger: TGAGTGGGAAGCCCTGGGCAAGCGAGGGTGCAGGGC...GGATTTCTCCATTCTTGGGCTCATGTGGTTGGCATGATCTTCAAAACAGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS-3UTR CAA 90 bp CCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATTCGCAAGAGCCAAGAACTaGGTGTCTGAGCTGGACAAA +
Preference number: 5 (lower is better)
Translates to: PLGQAKVCSSFSVPFYPFARAKN*VSELDK
Trigger: TTTGTCCAGCTCAGACACCAAGTTCTTGGCTCTTGC...GAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATGATGAGAGTGACCTTTaGGCGAAAGCTGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHDESDL*AKAVPT
Trigger: TGTGGGCACAGCTTTCGCCAAAAGGTCACTCTCATC...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCCTTCTGGCCAAGTCCTaGTCCACACACCCTGTCTAC +
Preference number: 5 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSLLAKS*STHPVY
Trigger: GTAGACAGGGTGTGTGGACAAGGACTTGGCCAGAAG...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS CCA 90 bp AGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTaGGGAAAACTTGGCTGGAATTCTGTTCTAGGCTCTGGACAAAGG +
Preference number: 5 (lower is better)
Translates to: SAYCLRSCELEKATR*GKLGWNSVLGSGQR
Trigger: CCTTTGTCCAGAGCCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CAA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAATTGGGCGCCGCTCCCTaGCTTTTGCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: THKGTLHALLQHRKPTLQLGAAP*LLLQLK
Trigger: CTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCAA...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp CATGTGGCTGTGGCTCTATCCAAAATGACTGGTGTCCCTAGAAGAGGAGGAAGCGATGAGAGTGACCTTTaGGCGAAAGCTGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: HVAVALSKMTGVPRRGGSDESDL*AKAVPT
Trigger: TGTGGGCACAGCTTTCGCCAAAAGGTCACTCTCATC...GCTTCCTCCTCTTCTAGGGACACCAGTCATTTTGGATAGAGCCACAGCCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CAA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTTGTAATCCCAACACTTaGGGAAGCAAAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: AVAQSQFTATSASRIQAICNPNT*GSKGRW
Trigger: CCATCTGCCTTTGCTTCCCAAAGTGTTGGGATTACA...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CAA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGTGTAATCCCAACACTTaGGGAAGCAAAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: SQFTATSASRIQAILLPQCNPNT*GSKGRW
Trigger: CCATCTGCCTTTGCTTCCCAAAGTGTTGGGATTACA...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CAA 90 bp ATCCTTTGGGCCAGGCGAAGGTCTGTTCCTCCTTCTCTGTTCCCTTCTACCCATGCTAGAGAGAAAGTCTaGGTCAGAATCACCACAGGT +
Preference number: 5 (lower is better)
Translates to: ILWARRRSVPPSLFPSTHAREKV*VRITTG
Trigger: ACCTGTGGTGATTCTGACCAAGACTTTCTCTCTAGC...ATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp TCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGCCCCAACCCTACTCATaGTACAGTTTTTCACACCTT +
Preference number: 5 (lower is better)
Translates to: SQFTATSASRIQAILLPQPQPYS*YSFSHL
Trigger: AAGGTGTGAAAAACTGTACAATGAGTAGGGTTGGGG...CTGAGGCAGGAGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS CCA 90 bp TTCGGCCTGCTGTTTATGCAAGAGCCAAGAACTTGGTGTCTGAGCTaGACAAAGGTCCAGAAGATGTTCGTTCTCCTCTCTCCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: FGLLFMQEPRTWCLS*TKVQKMFVLLSPRF
Trigger: GAACCTTGGAGAGAGGAGAACGAACATCTTCTGGACCTTTGTCCAGCTCAGACACCAAGTTCTTGGCTCTTGCATAAACAGCAGGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGTCGATGAGTTTTGGTTaGGAAAATGCAATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PLSAYCLRSCELEKATRWSMSFG*ENAIPR
Trigger: CCTGGGAATTGCATTTTCCAAACCAAAACTCATCGA...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAAGCCGCTCCCTTGCTTTaGCTCCAGCTCAAGCCTATT +
Preference number: 5 (lower is better)
Translates to: THKGTLHALLQHRKPTLQAAPLL*LQLKPI
Trigger: AATAGGCTTGAGCTGGAGCAAAAGCAAGGGAGCGGC...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp TCCAACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTCTCCTGCAGATGAGCTaGGGAAGATCTGTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SNPQGHITCSIAAQKTHTLLQMS*GRSVWD
Trigger: ATCCCACACAGATCTTCCCAAGCTCATCTGCAGGAG...AGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAACTTCTGGCCAAGTCCTaGTCCACACACCCTGTCTAC +
Preference number: 5 (lower is better)
Translates to: THKGTLHALLQHRKPTLQLLAKS*STHPVY
Trigger: GTAGACAGGGTGTGTGGACAAGGACTTGGCCAGAAG...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTTCACAATCCCAAATGTaGGTGAGGATGTACAACAAG +
Preference number: 5 (lower is better)
Translates to: AVAQSQFTATSASRIQAISQSQM*VRMYNK
Trigger: CTTGTTGTACATCCTCACCAACATTTGGGATTGTGA...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATAAAGCTGATCAGTGGTaGCCCAGGTACAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHKADQW*PRYRGG
Trigger: TCCTCCCCTGTACCTGGGCAACCACTGATCAGCTTT...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp AGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCTAGGACAGGTACTGTTTaGAAGATCATGCCAACCACA +
Preference number: 5 (lower is better)
Translates to: SGAISVHCNVRLPDSSNSRTGTV*KIMPTT
Trigger: TGTGGTTGGCATGATCTTCAAAACAGTACCTGTCCT...AGAATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS TCA 90 bp CCGCTCCCTTGCTTTTGCTCCAGCTCAAGCCTATTAAACCTTGCCTaGGAAACATTTGTTCGGCCTGCTGTTTATGCAAGAGCCAAGAAC +
Preference number: 5 (lower is better)
Translates to: PLPCFCSSSSLLNLA*ETFVRPAVYARAKN
Trigger: GTTCTTGGCTCTTGCATAAACAGCAGGCCGAACAAATGTTTCTCAGGCAAGGTTTAATAGGCTTGAGCTGGAGCAAAAGCAAGGGAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp CCACTTAGCGCATATTGTCTGAGGAGCTGCGAGCTAGAAAAGGCCACCAGGTGGCTTCAGCTCTATAAATaGCTGCAAGTAGAGTTACAC +
Preference number: 5 (lower is better)
Translates to: PLSAYCLRSCELEKATRWLQLYK*LQVELH
Trigger: GTGTAACTCTACTTGCAGCAATTTATAGAGCTGAAG...CCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp CACCTTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATGGCAGGAGAAATCACTaGAACACAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: HLEWSNHRWGNRKGQATYGRRNH*NTGGRG
Trigger: ACCTCTGCCTCCTGTGTTCAAGTGATTTCTCCTGCC...ATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATGGCAGGAGAAATCACTaGAACACAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHGRRNH*NTGGRG
Trigger: ACCTCTGCCTCCTGTGTTCAAGTGATTTCTCCTGCC...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480716.1
ENST00000481550.6
CDS-3UTR CAA 90 bp GCAGTGGCGCAATCTCAGTTCACTGCAACGTCCGCCTCCCGGATTCAAGCAATTCATAACTTATATAAGTaGAGGCTATGCATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: AVAQSQFTATSASRIQAIHNLYK*RLCMPV
Trigger: CACAGGCATGCATAGCCTCAACTTATATAAGTTATG...AATTGCTTGAATCCGGGAGGCGGACGTTGCAGTGAACTGAGATTGCGCCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp TGGTTTTATAACATGCTATCTCTTAGGGTACAGGGCTGCCCCAACCCTACTCATTGTGATCTCAGTTCATaGCAACCTTCGCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: WFYNMLSLRVQGCPNPTHCDLSS*QPSPPR
Trigger: CCTGGGAGGCGAAGGTTGCAATGAACTGAGATCACA...ATGAGTAGGGTTGGGGCAGCCCTGTACCCTAAGAGATAGCATGTTATAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS TCA 90 bp ATTTGTTCGGCCTGCTGTTTATGCAAGAGCCAAGAACTTGGTGTCTaGGCTGGACAAAGGTCCAGAAGATGTTCGTTCTCCTCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: ICSACCLCKSQELGV*AGQRSRRCSFSSLQ
Trigger: TTGGAGAGAGGAGAACGAACATCTTCTGGACCTTTGTCCAGCTCAGACACCAAGTTCTTGGCTCTTGCATAAACAGCAGGCCGAACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS CCA 90 bp GAGAAACATTTGTTCGGCCTGCTGTTTATGCAAGAGCCAAGAACTTaGTGTCTGAGCTGGACAAAGGTCCAGAAGATGTTCGTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: EKHLFGLLFMQEPRT*CLSWTKVQKMFVLL
Trigger: GAGGAGAACGAACATCTTCTGGACCTTTGTCCAGCTCAGACACCAAGTTCTTGGCTCTTGCATAAACAGCAGGCCGAACAAATGTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp TTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAATGCCTCCTTCCTGGTaGTCAGGAGTCCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: LNGQITDGETGRAKQHMKMPPSW*SGVLVT
Trigger: TGTCACCAGGACTCCTGACAACCAGGAAGGAGGCAT...TTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATGCCTCCTTCCTGGTaGTCAGGAGTCCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENMPPSW*SGVLVT
Trigger: TGTCACCAGGACTCCTGACAACCAGGAAGGAGGCAT...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CAA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAATTCTACTGGGTCACCTaGATGTGGGCTGAAGAATGT +
Preference number: 5 (lower is better)
Translates to: THKGTLHALLQHRKPTLQFYWVT*MWAEEC
Trigger: ACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAA...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp CCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATCTCCTGCAGATGAGCTaGGGAAGATCTGTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: PNLPIRSSGTSSLHKYENLLQMS*GRSVWD
Trigger: ATCCCACACAGATCTTCCCAAGCTCATCTGCAGGAG...ATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CAA 90 bp CAGCCAAACCTACCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAATTCTACTGGGTCACCTaGATGTGGGCTGAAGAATGT +
Preference number: 5 (lower is better)
Translates to: QPNLPIRSSGTSSLHKYEFYWVT*MWAEEC
Trigger: ACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAA...TTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGGTAGGTTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CAA 90 bp TACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGTTGTCCCAAGACTCATCCTTaGGGCCAGGCGAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: YVHLGLPASINMKIYFRCPKTHP*GQAKVC
Trigger: ACAGACCTTCGCCTGGCCCAAAGGATGAGTCTTGGG...ACAACGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS-3UTR CAA 90 bp ACCCACAAGGGCACATTACATGCTCTATTGCAGCACAGAAAACCCACACTACAAACATTACATGCTCTATaGCAGCACAGAAAACCCACA +
Preference number: 5 (lower is better)
Translates to: THKGTLHALLQHRKPTLQTLHAL*QHRKPT
Trigger: TGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGT...TTGTAGTGTGGGTTTTCTGTGCTGCAATAGAGCATGTAATGTGCCCTTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS-3UTR CAA 90 bp GATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAGATGCTCATGCTCACTAGACAAAAGCACTCAGTaGCTACATAGTGTAATACCA +
Preference number: 5 (lower is better)
Translates to: DGETGRAKQHMKRCSCSLDKSTQ*LHSVIP
Trigger: TGGTATTACACTATGTAGCAACTGAGTGCTTTTGTC...TAGTGAGCATGAGCATCTTTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp TTGAATGGTCAAATCACAGATGGGGAAACAGGAAGGGCCAAGCAACATATGAAAAAAAGAATAGACCCATaGAAAAGTAGGCAAACACCT +
Preference number: 5 (lower is better)
Translates to: LNGQITDGETGRAKQHMKKRIDP*KSRQTP
Trigger: AGGTGTTTGCCTACTTTTCAATGGGTCTATTCTTTT...TTTCATATGTTGCTTGGCCCTTCCTGTTTCCCCATCTGTGATTTGACCATTCAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000480716.1
CDS-3UTR CAA 90 bp CCAATACGTTCATCTGGGACTTCCAGCCTCCATAAATATGAAAATATATTTCCGGAAAATATATTTCCGTaGTCAAAATCACCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PIRSSGTSSLHKYENIFPENIFP*SKSPSL
Trigger: CAGGCTGGGTGATTTTGACAACGGAAATATATTTTC...CGGAAATATATTTTCATATTTATGGAGGCTGGAAGTCCCAGATGAACGTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395395.7
CDS CCA 72 bp CCTGCACCCTCGCTTGCCCAGGGCTTCCCACTCACCTaGACAAAGGTCCAGAAGATGTTCGTTCTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: PAPSLAQGFPLT*TKVQKMFVLLS
Trigger: AGAGAGGAGAACGAACATCTTCTGGACCTTTGTCCAGGTGAGTGGGAAGCCCTGGGCAAGCGAGGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481550.6
CDS GCA 72 bp GCTCTCTGGAGTACTCTTCCTAGAGGAGAGTCAAGTTaGAGAGGCAAATCACGCACCAGGCGACGATGCCGG +
Preference number: 6 (lower is better)
Translates to: ALWSTLPRGESS*RGKSRTRRRCR
Trigger: CCGGCATCGTCGCCTGGTGCGTGATTTGCCTCTGCAACTTGACTCTCCTCTAGGAAGAGTACTCCAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395395.7
ENST00000492115.2
CDS TCA 72 bp GCCTGCTGTTTATGCAAGAGCCAAGAACTTGGTGTCTaGGCTGGACAAAGGTCCAGAAGATGTTCGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ACCLCKSQELGV*AGQRSRRCSFS
Trigger: GGAGAACGAACATCTTCTGGACCTTTGTCCAGCTCAGACACCAAGTTCTTGGCTCTTGCATAAACAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS GCA 72 bp TACACATTTATCTTCCTTTCTTGGGCGCCGCTCCCTTaGTTTTGCTCCAGCTCAAGCCTATTAAACCTTGCC +
Preference number: 6 (lower is better)
Translates to: YTFIFLSWAPLP*FCSSSSLLNLA
Trigger: GGCAAGGTTTAATAGGCTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCAAGAAAGGAAGATAAATGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS CCA 72 bp TTGTTCGGCCTGCTGTTTATGCAAGAGCCAAGAACTTaGTGTCTGAGCTGGACAAAGGTCCAGAAGATGTTC +
Preference number: 6 (lower is better)
Translates to: LFGLLFMQEPRT*CLSWTKVQKMF
Trigger: GAACATCTTCTGGACCTTTGTCCAGCTCAGACACCAAGTTCTTGGCTCTTGCATAAACAGCAGGCCGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS CAA 72 bp TTGCTGCAAGTAGAGTTACACATTTATCTTCCTTTCTaGGGCGCCGCTCCCTTGCTTTTGCTCCAGCTCAAG +
Preference number: 6 (lower is better)
Translates to: LLQVELHIYLPF*GAAPLLLLQLK
Trigger: CTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCAAGAAAGGAAGATAAATGTGTAACTCTACTTGCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS CAA 90 bp CAAGTAGAGTTACACATTTATCTTCCTTTCTTGGGCGCCGCTCCCTaGCTTTTGCTCCAGCTCAAGCCTATTAAACCTTGCCTGAGAAAC +
Preference number: 6 (lower is better)
Translates to: QVELHIYLPFLGAAP*LLLQLKPIKPCLRN
Trigger: GTTTCTCAGGCAAGGTTTAATAGGCTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCAAGAAAGGAAGATAAATGTGTAACTCTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS GCA 72 bp CCCTTGCTTTTGCTCCAGCTCAAGCCTATTAAACCTTaGCTGAGAAACATTTGTTCGGCCTGCTGTTTATGC +
Preference number: 6 (lower is better)
Translates to: PLLLLQLKPIKP*LRNICSACCLC
Trigger: GCATAAACAGCAGGCCGAACAAATGTTTCTCAGGCAAGGTTTAATAGGCTTGAGCTGGAGCAAAAGCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS CAA 72 bp TTACACATTTATCTTCCTTTCTTGGGCGCCGCTCCCTaGCTTTTGCTCCAGCTCAAGCCTATTAAACCTTGC +
Preference number: 6 (lower is better)
Translates to: LHIYLPFLGAAP*LLLQLKPIKPC
Trigger: GCAAGGTTTAATAGGCTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCAAGAAAGGAAGATAAATGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS CAA 90 bp GAGTTACACATTTATCTTCCTTTCTTGGGCGCCGCTCCCTTGCTTTaGCTCCAGCTCAAGCCTATTAAACCTTGCCTGAGAAACATTTGT +
Preference number: 6 (lower is better)
Translates to: ELHIYLPFLGAAPLL*LQLKPIKPCLRNIC
Trigger: ACAAATGTTTCTCAGGCAAGGTTTAATAGGCTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCAAGAAAGGAAGATAAATGTGTAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS TCA 72 bp TGCTTTTGCTCCAGCTCAAGCCTATTAAACCTTGCCTaGGAAACATTTGTTCGGCCTGCTGTTTATGCAAGA +
Preference number: 6 (lower is better)
Translates to: CFCSSSSLLNLA*ETFVRPAVYAR
Trigger: TCTTGCATAAACAGCAGGCCGAACAAATGTTTCTCAGGCAAGGTTTAATAGGCTTGAGCTGGAGCAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8
CDS CAA 90 bp CTCTATAAATTGCTGCAAGTAGAGTTACACATTTATCTTCCTTTCTaGGGCGCCGCTCCCTTGCTTTTGCTCCAGCTCAAGCCTATTAAA +
Preference number: 6 (lower is better)
Translates to: LYKLLQVELHIYLPF*GAAPLLLLQLKPIK
Trigger: TTTAATAGGCTTGAGCTGGAGCAAAAGCAAGGGAGCGGCGCCCAAGAAAGGAAGATAAATGTGTAACTCTACTTGCAGCAATTTATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340911.8