RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF160 (Homo sapiens)

Ensembl gene IDs: ENSG00000170949

Ensembl transcript IDs: ENST00000355147.9, ENST00000418871.5, ENST00000429604.5, ENST00000594760.1, ENST00000596388.1, ENST00000596966.5, ENST00000597112.5, ENST00000599056.5, ENST00000599247.5, ENST00000599729.1, ENST00000599980.1, ENST00000600924.1, ENST00000601421.5, ENST00000601982.5, ENST00000602095.5, ENST00000683776.1

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTAACCTGCGAGGCCTaGATAGACCCTCTGCCACAT +
Preference number: 2 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVTCEA*IDPLPH
Trigger: ATGTGGCAGAGGGTCTATCCAGGCCTCGCAGGTTAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCAACTCATGAGGGATTaGCCACTGTCACTACATTTG +
Preference number: 2 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNQLMRD*PLSLHL
Trigger: CAAATGTAGTGACAGTGGCCAATCCCTCATGAGTTG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR TCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCCACATATGTTTACATaGTGTCTCTTGCTTATGGCC +
Preference number: 2 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNPHMFT*CLLLMA
Trigger: GGCCATAAGCAAGAGACATCATGTAAACATATGTGG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTAACCTGCGAGGCCTaGATAGACCCTCTGCCACAT +
Preference number: 2 (lower is better)
Translates to: EIILHLINDLHPINDPSIVTCEA*IDPLPH
Trigger: ATGTGGCAGAGGGTCTATCCAGGCCTCGCAGGTTAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTTACATGATGTCTCTTaGTTATGGCCTCTCATATCT +
Preference number: 2 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNLHDVS*LWPLIS
Trigger: AGATATGAGAGGCCATAAGCAAGAGACATCATGTAA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACAACTCATGAGGGATTaGCCACTGTCACTACATTTG +
Preference number: 2 (lower is better)
Translates to: IILHLINDLHPINDPSIPQLMRD*PLSLHL
Trigger: CAAATGTAGTGACAGTGGCCAATCCCTCATGAGTTG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR TCA 90 bp ATTCCAAATGTAAGTGACAACATGCAGTACTTGTATTTCTGTGCTGAAGCCTGGAAGACTGAGGATCAATaGCAGAAGGATTTTGTTAGG +
Preference number: 2 (lower is better)
Translates to: IPNVSDNMQYLYFCAEAWKTEDQ*QKDFVR
Trigger: CCTAACAAAATCCTTCTGTCATTGATCCTCAGTCTT...CCAGGCTTCAGCACAGAAATACAAGTACTGCATGTTGTCACTTACATTTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355147.9
3UTR-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACCACATATGTTTACATaGTGTCTCTTGCTTATGGCC +
Preference number: 2 (lower is better)
Translates to: IILHLINDLHPINDPSIPPHMFT*CLLLMA
Trigger: GGCCATAAGCAAGAGACATCATGTAAACATATGTGG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR GCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTACATGATGTCTCTTaGTTATGGCCTCTCATATCT +
Preference number: 2 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHLHDVS*LWPLIS
Trigger: AGATATGAGAGGCCATAAGCAAGAGACATCATGTAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGTGAAGGTAACTGACTaGCTACAAATATCCTGCAAC +
Preference number: 2 (lower is better)
Translates to: IILHLINDLHPINDPSIPVKVTD*LQISCN
Trigger: GTTGCAGGATATTTGTAGGCAGTCAGTTACCTTCAC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCAACTCATGAGGGATTaGCCACTGTCACTACATTTG +
Preference number: 2 (lower is better)
Translates to: EIILHLINDLHPINDPSIQLMRD*PLSLHL
Trigger: CAAATGTAGTGACAGTGGCCAATCCCTCATGAGTTG...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTCCAAGAAAGCACCATaGAAGGTGTGTAAGGATGCA +
Preference number: 2 (lower is better)
Translates to: EIILHLINDLHPINDPSISKKAP*KVCKDA
Trigger: TGCATCCTTACACACCTTCCATGGTGCTTTCTTGGA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR TCA 90 bp TCAAAAACCTATCATTTACTCCTAATGTTTTCACCCAGTGACCAACATCTCCCTCTTGTATTTCTGTGCTaGAGCCTGGAAAAACAGAAT +
Preference number: 2 (lower is better)
Translates to: SKTYHLLLMFSPSDQHLPLVFLC*SLEKQN
Trigger: ATTCTGTTTTTCCAGGCTTCAGCACAGAAATACAAG...AGGGAGATGTTGGTCACTGGGTGAAAACATTAGGAGTAAATGATAGGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355147.9
3UTR-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATGCCTACAAATATCCTaGAACCTTTTCGTATGTGAG +
Preference number: 2 (lower is better)
Translates to: IILHLINDLHPINDPSIPCLQIS*NLFVCE
Trigger: CTCACATACGAAAAGGTTGCAGGATATTTGTAGGCA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTGAAGGTAACTGACTaGCTACAAATATCCTGCAAC +
Preference number: 2 (lower is better)
Translates to: EIILHLINDLHPINDPSIVKVTD*LQISCN
Trigger: GTTGCAGGATATTTGTAGGCAGTCAGTTACCTTCAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR TCA 90 bp TCAAAAACCTATCATTTACTCCTAATGTTTTCACCCAGTGACCAACATCTCCCTGATTCCAAATGTAAGTaGCAACATGCAGTACTTGTA +
Preference number: 2 (lower is better)
Translates to: SKTYHLLLMFSPSDQHLPDSKCK*QHAVLV
Trigger: TACAAGTACTGCATGTTGTCACTTACATTTGGAATC...AGGGAGATGTTGGTCACTGGGTGAAAACATTAGGAGTAAATGATAGGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
3UTR-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATTACATGATGTCTCTTaGTTATGGCCTCTCATATCT +
Preference number: 2 (lower is better)
Translates to: IILHLINDLHPINDPSIPLHDVS*LWPLIS
Trigger: AGATATGAGAGGCCATAAGCAAGAGACATCATGTAA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGTAATGGCCTCAGGATaGATATTACATTTGTTTCGT +
Preference number: 2 (lower is better)
Translates to: IILHLINDLHPINDPSIPVMASG*ILHLFR
Trigger: ACGAAACAAATGTAATATGCATCCTGAGGCCATTAC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTGCCTACAAATATCCTaGAACCTTTTCGTATGTGAG +
Preference number: 2 (lower is better)
Translates to: EIILHLINDLHPINDPSICLQIS*NLFVCE
Trigger: CTCACATACGAAAAGGTTGCAGGATATTTGTAGGCA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTAATGGCCTCAGGATaGATATTACATTTGTTTCGT +
Preference number: 2 (lower is better)
Translates to: EIILHLINDLHPINDPSIVMASG*ILHLFR
Trigger: ACGAAACAAATGTAATATGCATCCTGAGGCCATTAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTGTGAAAGGAGTGAATaGTACCTAATGACCTCACCA +
Preference number: 3 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNCERSE*YLMTSP
Trigger: TGGTGAGGTCATTAGGTACAATTCACTCCTTTCACA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTCAACTCATGAGGGATaGGCCACTGTCACTACATTT +
Preference number: 3 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHSTHEG*ATVTTF
Trigger: AAATGTAGTGACAGTGGCCAATCCCTCATGAGTTGA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTGTGAAAGGAGTGAATaGTACCTAATGACCTCACCA +
Preference number: 3 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHCERSE*YLMTSP
Trigger: TGGTGAGGTCATTAGGTACAATTCACTCCTTTCACA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTCAACTCATGAGGGATaGGCCACTGTCACTACATTT +
Preference number: 3 (lower is better)
Translates to: EIILHLINDLHPINDPSISTHEG*ATVTTF
Trigger: AAATGTAGTGACAGTGGCCAATCCCTCATGAGTTGA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR TCA 72 bp AACAGAATACGCACCCCATGTAAGACTGAGGATCAATaGCAGAAGGATTTTGTTAGGTGTCTTTACGGTTAT +
Preference number: 3 (lower is better)
Translates to: NRIRTPCKTEDQ*QKDFVRCLYGY
Trigger: ATAACCGTAAAGACACCTAACAAAATCCTTCTGTCATTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355147.9
3UTR GCA 72 bp CTCAGTGAAACATTTCATAAGGTGAAGGTAACTGACTaGCTACAAATATCCTGCAACCTTTTCGTATGTGAG +
Preference number: 3 (lower is better)
Translates to: LSETFHKVKVTD*LQISCNLFVCE
Trigger: CTCACATACGAAAAGGTTGCAGGATATTTGTAGGCAGTCAGTTACCTTCACCTTATGAAATGTTTCACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
3UTR-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTGTGAAAGGAGTGAATaGTACCTAATGACCTCACCA +
Preference number: 3 (lower is better)
Translates to: EIILHLINDLHPINDPSICERSE*YLMTSP
Trigger: TGGTGAGGTCATTAGGTACAATTCACTCCTTTCACA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCCCGGGCATCGGGTGTaGGAATGGGGGACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNPGHRV*EWGTAR
Trigger: CCTCGCCGTCCCCCATTCGCACACCCGATGCCCGGG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
CDS-3UTR TCA 90 bp TTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATGGGGGACAGCGAGGCTaGAGCCACTCAGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FCAEAWKNRIRTPCKTEDGGQRG*SHSVGW
Trigger: CCAGCCCACTGAGTGGCTTCAGCCTCGCTGTCCCCC...ATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp GTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAATGAGTTGGGAGGTGCCTaGGGGATGAAGTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VLKPGKTEYAPHVRLRINELGGA*GMKWAG
Trigger: CCCCGCCCACTTCATCCCTCAGGCACCTCCCAACTC...ATTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATAGGTGCCAGCGAGGCTaGAGCCACTCAGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNRCQRG*SHSVGW
Trigger: CCAGCCCACTGAGTGGCTTCAGCCTCGCTGGCACCT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429604.5
CDS-3UTR CCA 90 bp TTGTATTTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTCATCGGGTGTGCGAATaGGGGACGGCGAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LYFCAEAWKNRIRTPCKTHRVCE*GTARRR
Trigger: CCTGCGCCTCGCCGTCCCCCATTCGCACACCCGATG...AGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAAATACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNAEATQ*AGSRDL
Trigger: GAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
CDS-3UTR TCA 90 bp ATTTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGCGGCGAGGCGCAGGTTaGGTCTACACAGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: ISVLKPGKTEYAPHVRLRRRGAG*VYTEEH
Trigger: GTGTTCCTCTGTGTAGACTCAACCTGCGCCTCGCCG...CCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp GTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAATATCCAGGAACGTTTCTaGGGTGGAGGGTGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: VLKPGKTEYAPHVRLRINIQERF*GGGCGA
Trigger: CGCACCGCACCCTCCACCTCAGAAACGTTCCTGGAT...ATTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR GCA 90 bp TCAAAAACCTATCATTTACTCCTAATGTTTTCACCCAGTGACCAACATCTCCCTCCCGGGCATCGGGTGTaGGAATGGGGGACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SKTYHLLLMFSPSDQHLPPGHRV*EWGTAR
Trigger: CCTCGCCGTCCCCCATTCGCACACCCGATGCCCGGG...AGGGAGATGTTGGTCACTGGGTGAAAACATTAGGAGTAAATGATAGGTTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGGCTGCAAGAAGAGCTaGGTCCCCTGTAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHGCKKS*VPCRRG
Trigger: GCCCCGCCTACAGGGGACCCAGCTCTTCTTGCAGCC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429604.5
ENST00000599056.5
CDS-3UTR TCA 90 bp ATTTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGGGTCTTCACTCCAGGTaGTCAGCTTCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISVLKPGKTEYAPHVRLRGLHSR*SASSGC
Trigger: GCAGCCACTGGAAGCTGATCACCTGGAGTGAAGACC...CCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR GCA 90 bp GTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAATTCAGCTTCCAGTGGCTaGAAGAAGAGCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VLKPGKTEYAPHVRLRINSASSG*KKSWVP
Trigger: GGGGACCCAGCTCTTCTTGCAGCCACTGGAAGCTGA...ATTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTCAGCTTCCAGTGGCTaGAAGAAGAGCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNSASSG*KKSWVP
Trigger: GGGGACCCAGCTCTTCTTGCAGCCACTGGAAGCTGA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429604.5
ENST00000599056.5
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACATCGGGTGTGCGAATaGGGGACGGCGAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPHRVCE*GTARRR
Trigger: CCTGCGCCTCGCCGTCCCCCATTCGCACACCCGATG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
CDS-3UTR CCA 90 bp TGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAAGGAACGTTTCTGAGGTaGAGGGTGCGGTGCGGAGAT +
Preference number: 4 (lower is better)
Translates to: CAEAWKNRIRTPCKTEDQGTFLR*RVRCGD
Trigger: ATCTCCGCACCGCACCCTCCACCTCAGAAACGTTCC...TTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp TTGTATTTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: LYFCAEAWKNRIRTPCKTAEATQ*AGSRDL
Trigger: GAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGC...AGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAAATACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHAEATQ*AGSRDL
Trigger: GAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCGGCGAGGCGCAGGTTaGGTCTACACAGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHRRGAG*VYTEEH
Trigger: GTGTTCCTCTGTGTAGACTCAACCTGCGCCTCGCCG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR TCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTCATACGCCATGGTGTaGTGCTTGCTCCGCACGATC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNSYAMV*CLLRTI
Trigger: GATCGTGCGGAGCAAGCATCACACCATGGCGTATGA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTCTTCCAGCGAGGCTaGAGCCACTCAGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHFFQRG*SHSVGW
Trigger: CCAGCCCACTGAGTGGCTTCAGCCTCGCTGGAAGAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418871.5
CDS-3UTR TCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCAGGCGCCAGCGAGGCTaGAGCCACTCAGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIRRQRG*SHSVGW
Trigger: CCAGCCCACTGAGTGGCTTCAGCCTCGCTGGCGCCT...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599056.5
CDS-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCCATGGTGTGATGCTTaGTCCGCACGATCCACTTCC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNPWCDA*SARSTS
Trigger: GGAAGTGGATCGTGCGGAGCAAGCATCACACCATGG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCATCGGGTGTGCGAATaGGGGACGGCGAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIHRVCE*GTARRR
Trigger: CCTGCGCCTCGCCGTCCCCCATTCGCACACCCGATG...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
CDS-3UTR CCA 90 bp TCAAAAACCTATCATTTACTCCTAATGTTTTCACCCAGTGACCAACATCTCCCTGGCTGCAAGAAGAGCTaGGTCCCCTGTAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SKTYHLLLMFSPSDQHLPGCKKS*VPCRRG
Trigger: GCCCCGCCTACAGGGGACCCAGCTCTTCTTGCAGCC...AGGGAGATGTTGGTCACTGGGTGAAAACATTAGGAGTAAATGATAGGTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGGCTGCAAGAAGAGCTaGGTCCCCTGTAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPGCKKS*VPCRRG
Trigger: GCCCCGCCTACAGGGGACCCAGCTCTTCTTGCAGCC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429604.5
ENST00000599056.5
CDS-3UTR CCA 90 bp TTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATACAGGCGGAGACGGCTaGAGACTCTTCCATGAGGTT +
Preference number: 4 (lower is better)
Translates to: FCAEAWKNRIRTPCKTEDTGGDG*RLFHEV
Trigger: AACCTCATGGAAGAGTCTCCAGCCGTCTCCGCCTGT...ATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp TGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAAGCAGAATGGAAGAAATaGCCGAGGGACCTCGACAGG +
Preference number: 4 (lower is better)
Translates to: CAEAWKNRIRTPCKTEDQAEWKK*PRDLDR
Trigger: CCTGTCGAGGTCCCTCGGCCATTTCTTCCATTCTGC...TTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTGATCAGCTTCCAGTaGCTGCAAGAAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVISFQ*LQEELG
Trigger: ACCCAGCTCTTCTTGCAGCCACTGGAAGCTGATCAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429604.5
ENST00000599056.5
CDS-3UTR CCA 90 bp GTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAATCTCTTCCATGAGGTTTaGGGCAGCAGATGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VLKPGKTEYAPHVRLRINLFHEV*GSRCQG
Trigger: TCCTTGGCATCTGCTGCCCCAAACCTCATGGAAGAG...ATTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCTTACCATCGGTCACTaGGTAATGGCCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNLTIGH*VMASGC
Trigger: GCATCCTGAGGCCATTACCCAGTGACCGATGGTAAG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACGGCGAGGCGCAGGTTaGGTCTACACAGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPRRGAG*VYTEEH
Trigger: GTGTTCCTCTGTGTAGACTCAACCTGCGCCTCGCCG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATAACACTCATACGCCATaGTGTGATGCTTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNNTHTP*CDACSA
Trigger: TGCGGAGCAAGCATCACACCATGGCGTATGAGTGTT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCAGAGAGGCCAGGAGTTaGGAGGTGCCAGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIREARS*EVPARL
Trigger: CAGCCTCGCTGGCACCTCCCAACTCCTGGCCTCTCT...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429604.5
CDS-3UTR TCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCATCCAGGAACGTTTCTaGGGTGGAGGGTGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIIQERF*GGGCGA
Trigger: CGCACCGCACCCTCCACCTCAGAAACGTTCCTGGAT...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
CDS-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGGTCTTCACTCCAGGTaGTCAGCTTCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPGLHSR*SASSGC
Trigger: GCAGCCACTGGAAGCTGATCACCTGGAGTGAAGACC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429604.5
ENST00000599056.5
CDS-3UTR TCA 90 bp ATTCCAAATGTAAGTGACAACATGCAGTACTTGTATTTCTGTGCTGAAGCCTGGCTGGAGACTCTTCCATaGGGTTTGGGGCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: IPNVSDNMQYLYFCAEAWLETLP*GLGQQM
Trigger: CATCTGCTGCCCCAAACCTCATGGAAGAGTCTCCAG...CCAGGCTTCAGCACAGAAATACAAGTACTGCATGTTGTCACTTACATTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGGAACGTTTCTGAGGTaGAGGGTGCGGTGCGGAGAT +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPGTFLR*RVRCGD
Trigger: ATCTCCGCACCGCACCCTCCACCTCAGAAACGTTCC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
CDS-3UTR CCA 90 bp TTGTATTTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGTGATCAGCTTCCAGTaGCTGCAAGAAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LYFCAEAWKNRIRTPCKTVISFQ*LQEELG
Trigger: ACCCAGCTCTTCTTGCAGCCACTGGAAGCTGATCAC...AGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAAATACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCTTACCATCGGTCACTaGGTAATGGCCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHLTIGH*VMASGC
Trigger: GCATCCTGAGGCCATTACCCAGTGACCGATGGTAAG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATCATACGCCATGGTGTaGTGCTTGCTCCGCACGATC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPSYAMV*CLLRTI
Trigger: GATCGTGCGGAGCAAGCATCACACCATGGCGTATGA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR TCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATATCCTTCCATCCCAATaGTCTTTCCAAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNILPSQ*SFQEST
Trigger: GGTGCTTTCTTGGAAAGATCATTGGGATGGAAGGAT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTCAGCTTCCAGTGGCTaGAAGAAGAGCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSISASSG*KKSWVP
Trigger: GGGGACCCAGCTCTTCTTGCAGCCACTGGAAGCTGA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429604.5
ENST00000599056.5
CDS-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCACTGTGTGGAATACTaGTTCTGTACTGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNHCVEY*FCTALL
Trigger: GAGAAGAGCAGTACAGAAGCAGTATTCCACACAGTG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCCTAAGGTCTTGGCCTaGTCCATTTCATGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNPKVLA*SISCSV
Trigger: AACTGAACATGAAATGGAGCAGGCCAAGACCTTAGG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATAACACTCATACGCCATaGTGTGATGCTTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHNTHTP*CDACSA
Trigger: TGCGGAGCAAGCATCACACCATGGCGTATGAGTGTT...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTCCAACACCACTGTGTaGAATACTGCTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNSNTTV*NTASVL
Trigger: CAGTACAGAAGCAGTATTCCACACAGTGGTGTTGGA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGTAACCTGCGAGGCCTaGATAGACCCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPVTCEA*IDPLPH
Trigger: ATGTGGCAGAGGGTCTATCCAGGCCTCGCAGGTTAC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTCCAAGAAAGCACCATaGAAGGTGTGTAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNSKKAP*KVCKDA
Trigger: TGCATCCTTACACACCTTCCATGGTGCTTTCTTGGA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTTCACAATTCACAGCTaGTCATTGAGAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNFTIHS*SLRSTG
Trigger: GCCTGTGCTTCTCAATGACCAGCTGTGAATTGTGAA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601421.5
3UTR CAA 72 bp ACTCTCCTCCCACAAAAATCCCAATGTCCTAAGGTCTaGGCCTGCTCCATTTCATGTTCAGTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: TLLPQKSQCPKV*ACSISCSVDRP
Trigger: TGGTCTATCAACTGAACATGAAATGGAGCAGGCCAAGACCTTAGGACATTGGGATTTTTGTGGGAGGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTGTCATCTCTCCATTaGCACTCAAAATCATGCACA +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVSSLH*HSKSCT
Trigger: TGTGCATGATTTTGAGTGTCAATGGAGAGATGACAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATACAGGTATTGCTCTTTaGTGCATAAGAGGGCGACCT +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHTGIAL*CIRGRP
Trigger: AGGTCGCCCTCTTATGCATCAAAGAGCAATACCTGT...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTCATCCCCCTCTCCTaGCATAAGAGCTCACTTGAA +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHFIPLS*HKSSLE
Trigger: TTCAAGTGAGCTCTTATGTCAGGAGAGGGGGATGAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTGAAGTGGGTGAGCTaGCAGATCCAGATTGTGACA +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHLKWVS*QIQIVT
Trigger: TGTCACAATCTGGATCTGTCAGCTCACCCACTTCAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATGGTGTGATGCTTaGTCCGCACGATCCACTTCC +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIPWCDA*SARSTS
Trigger: GGAAGTGGATCGTGCGGAGCAAGCATCACACCATGG...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTGAAGGTAACTGACTaGCTACAAATATCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVKVTD*LQISCN
Trigger: GTTGCAGGATATTTGTAGGCAGTCAGTTACCTTCAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGTGATCAGCTTCCAGTaGCTGCAAGAAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPVISFQ*LQEELG
Trigger: ACCCAGCTCTTCTTGCAGCCACTGGAAGCTGATCAC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429604.5
ENST00000599056.5
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACTTACCATCGGTCACTaGGTAATGGCCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPLTIGH*VMASGC
Trigger: GCATCCTGAGGCCATTACCCAGTGACCGATGGTAAG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATAATGTCCTAAGGTCTTaGCCTGCTCCATTTCATGTT +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNNVLRS*PAPFHV
Trigger: AACATGAAATGGAGCAGGCCAAGACCTTAGGACATT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp TTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATAAGACTGAGGATCAATaGCAGAAGGATTTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: FCAEAWKNRIRTPCKTEDKTEDQ*QKDFVR
Trigger: CCTAACAAAATCCTTCTGTCATTGATCCTCAGTCTT...ATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp GTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAATCTTGTATTTCTGTGCTaGAGCCTGGAAAAACAGAAT +
Preference number: 4 (lower is better)
Translates to: VLKPGKTEYAPHVRLRINLVFLC*SLEKQN
Trigger: ATTCTGTTTTTCCAGGCTTCAGCACAGAAATACAAG...ATTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp TTGTATTTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTAATGTTTTCACCCAGTaGCCAACATCTCCCTATTCC +
Preference number: 4 (lower is better)
Translates to: LYFCAEAWKNRIRTPCKTNVFTQ*PTSPYS
Trigger: GGAATAGGGAGATGTTGGTCACTGGGTGAAAACATT...AGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAAATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATATGCCTTCCGAGGTATaGATTGTACCTAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNMPSEV*IVPKDF
Trigger: AAAGTCTTTAGGTACAATTCATACCTCGGAAGGCAT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATATCCTTCCATCCCAATaGTCTTTCCAAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHILPSQ*SFQEST
Trigger: GGTGCTTTCTTGGAAAGATCATTGGGATGGAAGGAT...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCCTAAGGTCTTGGCCTaGTCCATTTCATGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHPKVLA*SISCSV
Trigger: AACTGAACATGAAATGGAGCAGGCCAAGACCTTAGG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp TTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATACATTCCGGCGTTCTTaGTTTTCTTGCTATTTTCAC +
Preference number: 4 (lower is better)
Translates to: FCAEAWKNRIRTPCKTEDTFRRS*FSCYFH
Trigger: GTGAAAATAGCAAGAAAACCAAGAACGCCGGAATGT...ATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATACATTCCGGCGTTCTTaGTTTTCTTGCTATTTTCAC +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNTFRRS*FSCYFH
Trigger: GTGAAAATAGCAAGAAAACCAAGAACGCCGGAATGT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTCCAACACCACTGTGTaGAATACTGCTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHSNTTV*NTASVL
Trigger: CAGTACAGAAGCAGTATTCCACACAGTGGTGTTGGA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTCATGCACATTTTTCTaGGGTTCCTTGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNSCTFF*GSLKEK
Trigger: CTTTTCCTTCAAGGAACCCCAGAAAAATGTGCATGA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTTAGACCTGTGGGTTTaGACACTAGAAGGAATTTGT +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNLDLWV*TLEGIC
Trigger: ACAAATTCCTTCTAGTGTCCAAACCCACAGGTCTAA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTCCAAGAAAGCACCATaGAAGGTGTGTAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHSKKAP*KVCKDA
Trigger: TGCATCCTTACACACCTTCCATGGTGCTTTCTTGGA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp ATTCCAAATGTAAGTGACAACATGCAGTACTTGTATTTCTGTGCTGAAGCCTGGTATCACACACCCCCATaGAAGTGGCAAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: IPNVSDNMQYLYFCAEAWYHTPP*KWQKQN
Trigger: ATTCTGCTTTTGCCACTTTCATGGGGGTGTGTGATA...CCAGGCTTCAGCACAGAAATACAAGTACTGCATGTTGTCACTTACATTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGTGTCATCTCTCCATTaGCACTCAAAATCATGCACA +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHVSSLH*HSKSCT
Trigger: TGTGCATGATTTTGAGTGTCAATGGAGAGATGACAC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCCACATATGTTTACATaGTGTCTCTTGCTTATGGCC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHPHMFT*CLLLMA
Trigger: GGCCATAAGCAAGAGACATCATGTAAACATATGTGG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAACAGGTATTGCTCTTTaGTGCATAAGAGGGCGACCT +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPTGIAL*CIRGRP
Trigger: AGGTCGCCCTCTTATGCATCAAAGAGCAATACCTGT...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTTCACAGCTGGTCATTaGGAAGCACAGGCCACAACT +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIFTAGH*EAQATT
Trigger: AGTTGTGGCCTGTGCTTCTCAATGACCAGCTGTGAA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR GCA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTAATGGCCTCAGGATaGATATTACATTTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVMASG*ILHLFR
Trigger: ACGAAACAAATGTAATATGCATCCTGAGGCCATTAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGTGAAGGTAACTGACTaGCTACAAATATCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHVKVTD*LQISCN
Trigger: GTTGCAGGATATTTGTAGGCAGTCAGTTACCTTCAC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATATGCCTTCCGAGGTATaGATTGTACCTAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHMPSEV*IVPKDF
Trigger: AAAGTCTTTAGGTACAATTCATACCTCGGAAGGCAT...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAATCCTTCCATCCCAATaGTCTTTCCAAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPILPSQ*SFQEST
Trigger: GGTGCTTTCTTGGAAAGATCATTGGGATGGAAGGAT...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCAGATTGTGACAATGTaGCATACAGATTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHQIVTM*HTDLVF
Trigger: GAAGACCAAATCTGTATGTCACATTGTCACAATCTG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR TCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGACAGATCCAGATTGTaGCAATGTGACATACAGATT +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHDRSRL*QCDIQI
Trigger: AATCTGTATGTCACATTGTCACAATCTGGATCTGTC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR GCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTGCCTACAAATATCCTaGAACCTTTTCGTATGTGAG +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHCLQIS*NLFVCE
Trigger: CTCACATACGAAAAGGTTGCAGGATATTTGTAGGCA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACCTAAGGTCTTGGCCTaGTCCATTTCATGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPPKVLA*SISCSV
Trigger: AACTGAACATGAAATGGAGCAGGCCAAGACCTTAGG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATACATTCCGGCGTTCTTaGTTTTCTTGCTATTTTCAC +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHTFRRS*FSCYFH
Trigger: GTGAAAATAGCAAGAAAACCAAGAACGCCGGAATGT...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATCCAACACCACTGTGTaGAATACTGCTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPSNTTV*NTASVL
Trigger: CAGTACAGAAGCAGTATTCCACACAGTGGTGTTGGA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTCATGCACATTTTTCTaGGGTTCCTTGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHSCTFF*GSLKEK
Trigger: CTTTTCCTTCAAGGAACCCCAGAAAAATGTGCATGA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTAGACCTGTGGGTTTaGACACTAGAAGGAATTTGT +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHLDLWV*TLEGIC
Trigger: ACAAATTCCTTCTAGTGTCCAAACCCACAGGTCTAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGTGTGGATTGCCATATaGGTAGTTAGACTTGATCTT +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHVWIAI*VVRLDL
Trigger: AAGATCAAGTCTAACTACCCATATGGCAATCCACAC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGTGTCATCTCTCCATTaGCACTCAAAATCATGCACA +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPVSSLH*HSKSCT
Trigger: TGTGCATGATTTTGAGTGTCAATGGAGAGATGACAC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATCTCTTCTGTCGCGTTaGTCTCTTTTACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPSLLSR*SLLPSF
Trigger: GAAAGAAGGTAAAAGAGATCAACGCGACAGAAGAGA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCACTGTGTGGAATACTaGTTCTGTACTGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIHCVEY*FCTALL
Trigger: GAGAAGAGCAGTACAGAAGCAGTATTCCACACAGTG...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTTTCCACAACTGTTTaGTTTTCGTCTTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHFSTTV*FSSLCE
Trigger: CTCACACAAAGACGAAAAGCAAACAGTTGTGGAAAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGTAATGGCCTCAGGATaGATATTACATTTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHVMASG*ILHLFR
Trigger: ACGAAACAAATGTAATATGCATCCTGAGGCCATTAC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCTAAACAACAGGTATTaGTCTTTGATGCATAAGAGG +
Preference number: 4 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHLNNRY*SLMHKR
Trigger: CCTCTTATGCATCAAAGAGCAATACCTGTTGTTTAG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTGTGACATACAGATTTaGTCTTCATCCCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSICDIQI*SSSPSP
Trigger: AGGAGAGGGGGATGAAGACCAAATCTGTATGTCACA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR TCA 90 bp ATTCCAAATGTAAGTGACAACATGCAGTACTTGTATTTCTGTGCTGAAGCCTGGGATTCCAAATGTAAGTaGCAACATGCAGTACTTGTA +
Preference number: 4 (lower is better)
Translates to: IPNVSDNMQYLYFCAEAWDSKCK*QHAVLV
Trigger: TACAAGTACTGCATGTTGTCACTTACATTTGGAATC...CCAGGCTTCAGCACAGAAATACAAGTACTGCATGTTGTCACTTACATTTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR TCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTGTCATCTCTCCATTaGCACTCAAAATCATGCACA +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIVSSLH*HSKSCT
Trigger: TGTGCATGATTTTGAGTGTCAATGGAGAGATGACAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTCTCTTCTGTCGCGTTaGTCTCTTTTACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSISLLSR*SLLPSF
Trigger: GAAAGAAGGTAAAAGAGATCAACGCGACAGAAGAGA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAATACTGCTTCTGTACTaGTCTTCTCTTTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPILLLY*SSLLVA
Trigger: TGCTACCAAAAGAGAAGAGCAGTACAGAAGCAGTAT...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAACATTCCGGCGTTCTTaGTTTTCTTGCTATTTTCAC +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPTFRRS*FSCYFH
Trigger: GTGAAAATAGCAAGAAAACCAAGAACGCCGGAATGT...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATTAGACCTGTGGGTTTaGACACTAGAAGGAATTTGT +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPLDLWV*TLEGIC
Trigger: ACAAATTCCTTCTAGTGTCCAAACCCACAGGTCTAA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCAATGTCCTAAGGTCTTaGCCTGCTCCATTTCATGTT +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSINVLRS*PAPFHV
Trigger: AACATGAAATGGAGCAGGCCAAGACCTTAGGACATT...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR TCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCAAAAGACAGAATACATaGGAGAATACATCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIKRQNT*ENTSQL
Trigger: GAGCTGGGATGTATTCTCTCATGTATTCTGTCTTTT...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCATACTGCTTCTGTACTaGTCTTCTCTTTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIILLLY*SSLLVA
Trigger: TGCTACCAAAAGAGAAGAGCAGTACAGAAGCAGTAT...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATTTTCCACAACTGTTTaGTTTTCGTCTTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPFSTTV*FSSLCE
Trigger: CTCACACAAAGACGAAAAGCAAACAGTTGTGGAAAA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACTAAACAACAGGTATTaGTCTTTGATGCATAAGAGG +
Preference number: 4 (lower is better)
Translates to: IILHLINDLHPINDPSIPLNNRY*SLMHKR
Trigger: CCTCTTATGCATCAAAGAGCAATACCTGTTGTTTAG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp ATTCCAAATGTAAGTGACAACATGCAGTACTTGTATTTCTGTGCTGAAGCCTGGTATAGGTATACAATATaGACTGATGGAAACAAGCCT +
Preference number: 4 (lower is better)
Translates to: IPNVSDNMQYLYFCAEAWYRYTI*TDGNKP
Trigger: AGGCTTGTTTCCATCAGTCCATATTGTATACCTATA...CCAGGCTTCAGCACAGAAATACAAGTACTGCATGTTGTCACTTACATTTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTCATGCACATTTTTCTaGGGTTCCTTGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSISCTFF*GSLKEK
Trigger: CTTTTCCTTCAAGGAACCCCAGAAAAATGTGCATGA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTGTGGATTGCCATATaGGTAGTTAGACTTGATCTT +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIVWIAI*VVRLDL
Trigger: AAGATCAAGTCTAACTACCCATATGGCAATCCACAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTTTTCCACAACTGTTTaGTTTTCGTCTTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSIFSTTV*FSSLCE
Trigger: CTCACACAAAGACGAAAAGCAAACAGTTGTGGAAAA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR GCA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTTACATGATGTCTCTTaGTTATGGCCTCTCATATCT +
Preference number: 4 (lower is better)
Translates to: EIILHLINDLHPINDPSILHDVS*LWPLIS
Trigger: AGATATGAGAGGCCATAAGCAAGAGACATCATGTAA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS TCA 90 bp TGGCCGAGGGACCTCGACAGGCGGAGACGGCTGGAGACTCTTCCATaGGGTTTGGGGCAGCAGATGCCAAGGAGCAGCAGCCAATGTTTC +
Preference number: 5 (lower is better)
Translates to: WPRDLDRRRRLETLP*GLGQQMPRSSSQCF
Trigger: GAAACATTGGCTGCTGCTCCTTGGCATCTGCTGCCCCAAACCTCATGGAAGAGTCTCCAGCCGTCTCCGCCTGTCGAGGTCCCTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS CCA 90 bp TTCCTCTTCTTCCAGACTTCTTCCAGCGAGGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTCTCTAGGTCGTCAGGGGGCAGTGTT +
Preference number: 5 (lower is better)
Translates to: FLFFQTSSSEAEATQ*AGSRDLSRSSGGSV
Trigger: AACACTGCCCCCTGACGACCTAGAGAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGCCTCGCTGGAAGAAGTCTGGAAGAAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000599247.5
ENST00000602095.5
CDS GCA 90 bp CCACACTCGGAATCCACCATCCCACCAGACGTTAAAATCCCCAGGTaGGCTCATGGGATTGGTAGCGAGTCCCAGCGTTTCCGCGGGAAA +
Preference number: 5 (lower is better)
Translates to: PHSESTIPPDVKIPR*AHGIGSESQRFRGK
Trigger: TTTCCCGCGGAAACGCTGGGACTCGCTACCAATCCCATGAGCGCACCTGGGGATTTTAACGTCTGGTGGGATGGTGGATTCCGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596388.1
CDS-3UTR CAA 90 bp GTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGATCAATACGGCGAGGCGCAGGTaGAGTCTACACAGAGGAACA +
Preference number: 5 (lower is better)
Translates to: VLKPGKTEYAPHVRLRINTARRR*SLHRGT
Trigger: TGTTCCTCTGTGTAGACTCAACCTGCGCCTCGCCGT...ATTGATCCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATACGGCGAGGCGCAGGTaGAGTCTACACAGAGGAACA +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNTARRR*SLHRGT
Trigger: TGTTCCTCTGTGTAGACTCAACCTGCGCCTCGCCGT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTGCAGTGGCATGATCTaGGCTCACCACAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNCSGMI*AHHNLR
Trigger: GCGGAGGTTGTGGTGAGCCAAGATCATGCCACTGCA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS GCA 90 bp CACCAGCGAGGCTGCGGAACAGCCGGCAGACAACAGAGGCATTCCTaGATACAAACTGGCACAAGCTCTTTAGTTAAGCTACAATCAAAA +
Preference number: 5 (lower is better)
Translates to: HQRGCGTAGRQQRHS*IQTGTSSLVKLQSK
Trigger: TTTTGATTGTAGCTTAACTAAAGAGCTTGTGCCAGTTTGTATGCAGGAATGCCTCTGTTGTCTGCCGGCTGTTCCGCAGCCTCGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS TCA 90 bp ATTCACAGCTGGTCATTGAGAAGCACAGGCCACAACTTGTGTTTGTaGCTGGCATTAATGTGTGTGCGCTGTTGTGGGATTGAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: IHSWSLRSTGHNLCL*LALMCVRCCGIEPS
Trigger: TGAGGGCTCAATCCCACAACAGCGCACACACATTAATGCCAGTCACAAACACAAGTTGTGGCCTGTGCTTCTCAATGACCAGCTGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATACGGCGAGGCGCAGGTaGAGTCTACACAGAGGAACA +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHTARRR*SLHRGT
Trigger: TGTTCCTCTGTGTAGACTCAACCTGCGCCTCGCCGT...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418871.5
ENST00000429604.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTGCAGTGGCATGATCTaGGCTCACCACAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHCSGMI*AHHNLR
Trigger: GCGGAGGTTGTGGTGAGCCAAGATCATGCCACTGCA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCAATGTCCTAAGGTCTaGGCCTGCTCCATTTCATGT +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNQCPKV*ACSISC
Trigger: ACATGAAATGGAGCAGGCCAAGACCTTAGGACATTG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATAACAGGTATTGCTCTTaGATGCATAAGAGGGCGACC +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNNRYCS*MHKRAT
Trigger: GGTCGCCCTCTTATGCATCAAAGAGCAATACCTGTT...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATGCAGTGGCATGATCTaGGCTCACCACAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPCSGMI*AHHNLR
Trigger: GCGGAGGTTGTGGTGAGCCAAGATCATGCCACTGCA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATTTCTGTGCTGAAGCCTGGAAAAACAGAATACGCACCCCATGTAAGACTGAGGGACAACATGCAGTACTaGTATTTCTGTGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ISVLKPGKTEYAPHVRLRDNMQY*YFCAEA
Trigger: GGCTTCAGCACAGAAATACAAGTACTGCATGTTGTC...CCTCAGTCTTACATGGGGTGCGTATTCTGTTTTTCCAGGCTTCAGCACAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTCAACTCATGAGGGATaGGCCACTGTCACTACATTT +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNSTHEG*ATVTTF
Trigger: AAATGTAGTGACAGTGGCCAATCCCTCATGAGTTGA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTGCGCTGTTGTGGGATaGAGCCCTCAGCCTATGGGA +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSICAVVG*SPQPMG
Trigger: TCCCATAGGCTGAGGGCTCAATCCCACAACAGCGCA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS CCA 90 bp GAAGCCAGAATCAAAAACTACAAGTGGCTGATTAGTGAAATGCTGTaGTCCCAACAGGAGATAACGAGATATCAAAAGAAGCCAGGCACG +
Preference number: 5 (lower is better)
Translates to: EARIKNYKWLISEML*SQQEITRYQKKPGT
Trigger: CGTGCCTGGCTTCTTTTGATATCTCGTTATCTCCTGTTGGGACCACAGCATTTCACTAATCAGCCACTTGTAGTTTTTGATTCTGGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS CCA 90 bp TGTAGCATGTCTTCCCTGAAGGAAGCCAGAATCAAAAACTACAAGTaGCTGATTAGTGAAATGCTGTGGTCCCAACAGGAGATAACGAGA +
Preference number: 5 (lower is better)
Translates to: CSMSSLKEARIKNYK*LISEMLWSQQEITR
Trigger: TCTCGTTATCTCCTGTTGGGACCACAGCATTTCACTAATCAGCCACTTGTAGTTTTTGATTCTGGCTTCCTTCAGGGAAGACATGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCACATTCCGGCGTTCTaGGTTTTCTTGCTATTTTCA +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNHIPAF*VFLLFS
Trigger: TGAAAATAGCAAGAAAACCAAGAACGCCGGAATGTG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTGTGTCATCTCTCCATaGACACTCAAAATCATGCAC +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNCVISP*TLKIMH
Trigger: GTGCATGATTTTGAGTGTCAATGGAGAGATGACACA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTCTCTTCTGTCGCGTaGATCTCTTTTACCTTCTTT +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVSSVA*ISFTFF
Trigger: AAAGAAGGTAAAAGAGATCAACGCGACAGAAGAGAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTTTAGACCTGTGGGTTaGGACACTAGAAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNFRPVG*DTRRNL
Trigger: CAAATTCCTTCTAGTGTCCAAACCCACAGGTCTAAA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCTTCCGAGGTATGAATaGTACCTAAAGACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNLPRYE*YLKTLP
Trigger: TGGCAAAGTCTTTAGGTACAATTCATACCTCGGAAG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCAATGTCCTAAGGTCTaGGCCTGCTCCATTTCATGT +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHQCPKV*ACSISC
Trigger: ACATGAAATGGAGCAGGCCAAGACCTTAGGACATTG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATAACAGGTATTGCTCTTaGATGCATAAGAGGGCGACC +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHNRYCS*MHKRAT
Trigger: GGTCGCCCTCTTATGCATCAAAGAGCAATACCTGTT...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATTTTGGTAGCAAATCCTaGATTGTACATTTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNFGSKS*IVHLGG
Trigger: CCCTCCTAAATGTACAATCAAGGATTTGCTACCAAA...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGAATTCTTCGGTGATTaGCCAGGTGAGCATTTTGAG +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHEFFGD*PGEHFE
Trigger: CTCAAAATGCTCACCTGGCAAATCACCGAAGAATTC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTGTGTCATCTCTCCATaGACACTCAAAATCATGCAC +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHCVISP*TLKIMH
Trigger: GTGCATGATTTTGAGTGTCAATGGAGAGATGACACA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTTAGACCTGTGGGTTaGGACACTAGAAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHFRPVG*DTRRNL
Trigger: CAAATTCCTTCTAGTGTCCAAACCCACAGGTCTAAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCTTCCGAGGTATGAATaGTACCTAAAGACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHLPRYE*YLKTLP
Trigger: TGGCAAAGTCTTTAGGTACAATTCATACCTCGGAAG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCATCATAGTTTTACATaGTTTTTCGCCACTCCCAAA +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNHHSFT*FFATPK
Trigger: TTTGGGAGTGGCGAAAAACAATGTAAAACTATGATG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATCCATTTCATGTTCAGTaGATAGACCATTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNPFHVQ*IDHFFP
Trigger: AGGAAAGAAATGGTCTATCAACTGAACATGAAATGG...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACAATGTCCTAAGGTCTaGGCCTGCTCCATTTCATGT +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPQCPKV*ACSISC
Trigger: ACATGAAATGGAGCAGGCCAAGACCTTAGGACATTG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTATTTTTAGTACAATaGGGGTTTCTCCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVFLVQ*GFLHVG
Trigger: ACCAACATGGAGAAACCCCAATTGTACTAAAAATAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CAGAGACTGTTATTCCTCCTAGGAATCCTCACTTACCATCGGTCACTGGGTAATGTTACTCTACTTCTGTaGATTAAACTCTTCACTCTG +
Preference number: 5 (lower is better)
Translates to: QRLLFLLGILTYHRSLGNVTLLL*IKLFTL
Trigger: CAGAGTGAAGAGTTTAATCAACAGAAGTAGAGTAAC...ATTACCCAGTGACCGATGGTAAGTGAGGATTCCTAGGAGGAATAACAGTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS GCA 90 bp AAATACAGTTCCATTCTCTCTAATGGCAAGGTTGTTCTGCTTATATaGCATTCTCACCTACAATACCCGACGGACAAAGGTTCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: KYSSILSNGKVVLLI*HSHLQYPTDKGSCK
Trigger: CTTACAAGAACCTTTGTCCGTCGGGTATTGTAGGTGAGAATGGCATATAAGCAGAACAACCTTGCCATTAGAGAGAATGGAACTGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597112.5
CDS-3UTR CAA 90 bp ATTCCAAATGTAAGTGACAACATGCAGTACTTGTATTTCTGTGCTGAAGCCTGGCACATTCCGGCGTTCTaGGTTTTCTTGCTATTTTCA +
Preference number: 5 (lower is better)
Translates to: IPNVSDNMQYLYFCAEAWHIPAF*VFLLFS
Trigger: TGAAAATAGCAAGAAAACCAAGAACGCCGGAATGTG...CCAGGCTTCAGCACAGAAATACAAGTACTGCATGTTGTCACTTACATTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATTTTGGTAGCAAATCCTaGATTGTACATTTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHFGSKS*IVHLGG
Trigger: CCCTCCTAAATGTACAATCAAGGATTTGCTACCAAA...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATCAACTCATGAGGGATaGGCCACTGTCACTACATTT +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPSTHEG*ATVTTF
Trigger: AAATGTAGTGACAGTGGCCAATCCCTCATGAGTTGA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCAACAGGTATTGCTCTTaGATGCATAAGAGGGCGACC +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSINRYCS*MHKRAT
Trigger: GGTCGCCCTCTTATGCATCAAAGAGCAATACCTGTT...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATGTGTCATCTCTCCATaGACACTCAAAATCATGCAC +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPCVISP*TLKIMH
Trigger: GTGCATGATTTTGAGTGTCAATGGAGAGATGACACA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCAGTCTCTTCTGTCGCGTaGATCTCTTTTACCTTCTTT +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPVSSVA*ISFTFF
Trigger: AAAGAAGGTAAAAGAGATCAACGCGACAGAAGAGAC...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATTTAGACCTGTGGGTTaGGACACTAGAAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPFRPVG*DTRRNL
Trigger: CAAATTCCTTCTAGTGTCCAAACCCACAGGTCTAAA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACTTCCGAGGTATGAATaGTACCTAAAGACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPLPRYE*YLKTLP
Trigger: TGGCAAAGTCTTTAGGTACAATTCATACCTCGGAAG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGAATTCTTCGGTGATTaGCCAGGTGAGCATTTTGAG +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSIEFFGD*PGEHFE
Trigger: CTCAAAATGCTCACCTGGCAAATCACCGAAGAATTC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATGTGAAAGGAGTGAATaGTACCTAATGACCTCACCA +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPCERSE*YLMTSP
Trigger: TGGTGAGGTCATTAGGTACAATTCACTCCTTTCACA...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATCCATTTCATGTTCAGTaGATAGACCATTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHPFHVQ*IDHFFP
Trigger: AGGAAAGAAATGGTCTATCAACTGAACATGAAATGG...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGTATTTTTAGTACAATaGGGGTTTCTCCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHVFLVQ*GFLHVG
Trigger: ACCAACATGGAGAAACCCCAATTGTACTAAAAATAC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp CATCGGTCACTGGGTAATGGCCTCAGGATGCATATTACATTTGTTTCGTTTCATGTTACTCTACTTCTGTaGATTAAACTCTTCACTCTG +
Preference number: 5 (lower is better)
Translates to: HRSLGNGLRMHITFVSFHVTLLL*IKLFTL
Trigger: CAGAGTGAAGAGTTTAATCAACAGAAGTAGAGTAAC...ATGAAACGAAACAAATGTAATATGCATCCTGAGGCCATTACCCAGTGACCGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATTCCAAATGTAAGTGACAACATGCAGTACTTGTATTTCTGTGCTGAAGCCTGGCCCACATTCTACTCTTaGCTGCTATTAGTTTTATTG +
Preference number: 5 (lower is better)
Translates to: IPNVSDNMQYLYFCAEAWPTFYS*LLLVLL
Trigger: CAATAAAACTAATAGCAGCAAAGAGTAGAATGTGGG...CCAGGCTTCAGCACAGAAATACAAGTACTGCATGTTGTCACTTACATTTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTGTGTCATCTCTCCATaGACACTCAAAATCATGCAC +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSICVISP*TLKIMH
Trigger: GTGCATGATTTTGAGTGTCAATGGAGAGATGACACA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTCTCTTCTGTCGCGTaGATCTCTTTTACCTTCTTT +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSIVSSVA*ISFTFF
Trigger: AAAGAAGGTAAAAGAGATCAACGCGACAGAAGAGAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCTTCCGAGGTATGAATaGTACCTAAAGACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSILPRYE*YLKTLP
Trigger: TGGCAAAGTCTTTAGGTACAATTCATACCTCGGAAG...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCTTTGGTAGCAAATCCTaGATTGTACATTTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSIFGSKS*IVHLGG
Trigger: CCCTCCTAAATGTACAATCAAGGATTTGCTACCAAA...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp ATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCACATCATAGTTTTACATaGTTTTTCGCCACTCCCAAA +
Preference number: 5 (lower is better)
Translates to: IILHLINDLHPINDPSIPHHSFT*FFATPK
Trigger: TTTGGGAGTGGCGAAAAACAATGTAAAACTATGATG...TGGGATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCCCATTTCATGTTCAGTaGATAGACCATTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSIPFHVQ*IDHFFP
Trigger: AGGAAAGAAATGGTCTATCAACTGAACATGAAATGG...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTATTTTTAGTACAATaGGGGTTTCTCCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSIVFLVQ*GFLHVG
Trigger: ACCAACATGGAGAAACCCCAATTGTACTAAAAATAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS-3UTR CAA 90 bp GAAATAATCCTTCACCTAATCAATGATCTTCACCCAATCAATGATCCTTCCATCGTTACTCTACTTCTGTaGATTAAACTCTTCACTCTG +
Preference number: 5 (lower is better)
Translates to: EIILHLINDLHPINDPSIVTLLL*IKLFTL
Trigger: CAGAGTGAAGAGTTTAATCAACAGAAGTAGAGTAAC...GATGGAAGGATCATTGATTGGGTGAAGATCATTGATTAGGTGAAGGATTATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000601421.5
CDS CCA 72 bp CCCGGGGCAGGCGCCAGCGAGGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTCTCTAGGTCGTCAGGG +
Preference number: 6 (lower is better)
Translates to: PGAGASEAEATQ*AGSRDLSRSSG
Trigger: CCCTGACGACCTAGAGAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGCCTCGCTGGCGCCTGCCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599056.5
CDS CCA 72 bp AAGTGGGCGGGGGACAGCGAGGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTCTCTAGGTCGTCAGGG +
Preference number: 6 (lower is better)
Translates to: KWAGDSEAEATQ*AGSRDLSRSSG
Trigger: CCCTGACGACCTAGAGAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGCCTCGCTGTCCCCCGCCCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS CCA 72 bp GAGTTGGGAGGTGCCAGCGAGGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTCTCTAGGTCGTCAGGG +
Preference number: 6 (lower is better)
Translates to: ELGGASEAEATQ*AGSRDLSRSSG
Trigger: CCCTGACGACCTAGAGAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGCCTCGCTGGCACCTCCCAACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429604.5
ENST00000596966.5
ENST00000597112.5
ENST00000600924.1
CDS GCA 72 bp GGTGCAGCCCCCAGCTTACTAGGACACCAGCGAGGCTaGGGAACAGCCGGCAGACAACAGAGGCATTCCTGC +
Preference number: 6 (lower is better)
Translates to: GAAPSLLGHQRG*GTAGRQQRHSC
Trigger: GCAGGAATGCCTCTGTTGTCTGCCGGCTGTTCCGCAGCCTCGCTGGTGTCCTAGTAAGCTGGGGGCTGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS TCA 72 bp GACCTCGACAGGCGGAGACGGCTGGAGACTCTTCCATaGGGTTTGGGGCAGCAGATGCCAAGGAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: DLDRRRRLETLP*GLGQQMPRSSS
Trigger: GCTGCTGCTCCTTGGCATCTGCTGCCCCAAACCTCATGGAAGAGTCTCCAGCCGTCTCCGCCTGTCGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS GCA 72 bp CTCATCTCCCGTGGAATCCTGAGGTGGAGGGTGCGGTaGGGAGATTTTAAGTCCGTAGCGACCCCCGGGCAT +
Preference number: 6 (lower is better)
Translates to: LISRGILRWRVR*GDFKSVATPGH
Trigger: ATGCCCGGGGGTCGCTACGGACTTAAAATCTCCGCACCGCACCCTCCACCTCAGGATTCCACGGGAGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596388.1
CDS CCA 72 bp AGAAATGGCCGAGGGACCTCGACAGGCGGAGACGGCTaGAGACTCTTCCATGAGGTTTGGGGCAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: RNGRGTSTGGDG*RLFHEVWGSRC
Trigger: GCATCTGCTGCCCCAAACCTCATGGAAGAGTCTCCAGCCGTCTCCGCCTGTCGAGGTCCCTCGGCCATTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS CCA 72 bp TTCCAGACTTCTTCCAGCGAGGCTGAAGCCACTCAGTaGGCTGGGAGCCGGGATCTCTCTAGGTCGTCAGGG +
Preference number: 6 (lower is better)
Translates to: FQTSSSEAEATQ*AGSRDLSRSSG
Trigger: CCCTGACGACCTAGAGAGATCCCGGCTCCCAGCCCACTGAGTGGCTTCAGCCTCGCTGGAAGAAGTCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418871.5
ENST00000599247.5
ENST00000602095.5
CDS CAA 90 bp CCACCATCCCACCAGACGTTAAAATCCCCAGGTGCGCTCATGGGATaGGTAGCGAGTCCCAGCGTTTCCGCGGGAAACTCTGAGACCCGG +
Preference number: 6 (lower is better)
Translates to: PPSHQTLKSPGALMG*VASPSVSAGNSETR
Trigger: CCGGGTCTCAGAGTTTCCCGCGGAAACGCTGGGACTCGCTACCAATCCCATGAGCGCACCTGGGGATTTTAACGTCTGGTGGGATGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596388.1
CDS GCA 72 bp TCGGATCCAGGAACGTTTCTGAGGTGGAGGGTGCGGTaGGGAGATTTTAAGTCCGTAGCGACCCCCGGGCAT +
Preference number: 6 (lower is better)
Translates to: SDPGTFLRWRVR*GDFKSVATPGH
Trigger: ATGCCCGGGGGTCGCTACGGACTTAAAATCTCCGCACCGCACCCTCCACCTCAGAAACGTTCCTGGATCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000355147.9
ENST00000418871.5
ENST00000429604.5
ENST00000594760.1
ENST00000596966.5
ENST00000597112.5
ENST00000599056.5
ENST00000599247.5
ENST00000599980.1
ENST00000602095.5
ENST00000683776.1
CDS GCA 72 bp GAGCTTGTAGTAACGTACGCAGACATTAGGTGGCGGTaGAGCCCCCAGCTTACTAGGACACCAGCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ELVVTYADIRWR*SPQLTRTPARL
Trigger: CAGCCTCGCTGGTGTCCTAGTAAGCTGGGGGCTGCACCGCCACCTAATGTCTGCGTACGTTACTACAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS CAA 72 bp CACCAGACGTTAAAATCCCCAGGTGCGCTCATGGGATaGGTAGCGAGTCCCAGCGTTTCCGCGGGAAACTCT +
Preference number: 6 (lower is better)
Translates to: HQTLKSPGALMG*VASPSVSAGNS
Trigger: AGAGTTTCCCGCGGAAACGCTGGGACTCGCTACCAATCCCATGAGCGCACCTGGGGATTTTAACGTCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596388.1
CDS CCA 72 bp CAGGTTGAGTCTACACAGAGGAACACTCATACGCCATaGTGTGATGCTTGCTCCGCACGATCCACTTCCGGG +
Preference number: 6 (lower is better)
Translates to: QVESTQRNTHTP*CDACSARSTSG
Trigger: CCCGGAAGTGGATCGTGCGGAGCAAGCATCACACCATGGCGTATGAGTGTTCCTCTGTGTAGACTCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000597112.5
ENST00000600924.1
ENST00000683776.1
CDS CCA 72 bp AAACCAGAGCTTGTAGTAACGTACGCAGACATTAGGTaGCGGTGCAGCCCCCAGCTTACTAGGACACCAGCG +
Preference number: 6 (lower is better)
Translates to: KPELVVTYADIR*RCSPQLTRTPA
Trigger: CGCTGGTGTCCTAGTAAGCTGGGGGCTGCACCGCCACCTAATGTCTGCGTACGTTACTACAAGCTCTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS GCA 72 bp GGCTGCGGAACAGCCGGCAGACAACAGAGGCATTCCTaGATACAAACTGGCACAAGCTCTTTAGTTAAGCTA +
Preference number: 6 (lower is better)
Translates to: GCGTAGRQQRHS*IQTGTSSLVKL
Trigger: TAGCTTAACTAAAGAGCTTGTGCCAGTTTGTATGCAGGAATGCCTCTGTTGTCTGCCGGCTGTTCCGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS TCA 72 bp GGGGGTCATCAGAATTCACAATTCACAGCTGGTCATTaGGAAGCACAGGCCACAACTTGTGTTTGTGACTGG +
Preference number: 6 (lower is better)
Translates to: GGHQNSQFTAGH*EAQATTCVCDW
Trigger: CCAGTCACAAACACAAGTTGTGGCCTGTGCTTCTCAATGACCAGCTGTGAATTGTGAATTCTGATGACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS CAA 72 bp TGTTTCCATCTCCTGAGCAGGTCTGTGACCACGCCTTaGACACATTCCGGCGTTCTTGGTTTTCTTGCTATT +
Preference number: 6 (lower is better)
Translates to: CFHLLSRSVTTP*THSGVLGFLAI
Trigger: AATAGCAAGAAAACCAAGAACGCCGGAATGTGTCAAAGGCGTGGTCACAGACCTGCTCAGGAGATGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355147.9
CDS GCA 72 bp ATCACTCATATATACACATATGTCTCTGAGGACTCCTaGAAATCGAGTCTGGATGTGCAGGAGCCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: ITHIYTYVSEDS*KSSLDVQEPGK
Trigger: CTTCCCAGGCTCCTGCACATCCAGACTCGATTTGCAGGAGTCCTCAGAGACATATGTGTATATATGAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599980.1
CDS CCA 72 bp TCAAGGAGGGGGTCATCAGAATTCACAATTCACAGCTaGTCATTGAGAAGCACAGGCCACAACTTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: SRRGSSEFTIHS*SLRSTGHNLCL
Trigger: CAAACACAAGTTGTGGCCTGTGCTTCTCAATGACCAGCTGTGAATTGTGAATTCTGATGACCCCCTCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601421.5
CDS CCA 72 bp TCTTCCCTGAAGGAAGCCAGAATCAAAAACTACAAGTaGCTGATTAGTGAAATGCTGTGGTCCCAACAGGAG +
Preference number: 6 (lower is better)
Translates to: SSLKEARIKNYK*LISEMLWSQQE
Trigger: CTCCTGTTGGGACCACAGCATTTCACTAATCAGCCACTTGTAGTTTTTGATTCTGGCTTCCTTCAGGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599729.1
CDS GCA 72 bp TCCATTCTCTCTAATGGCAAGGTTGTTCTGCTTATATaGCATTCTCACCTACAATACCCGACGGACAAAGGT +
Preference number: 6 (lower is better)
Translates to: SILSNGKVVLLI*HSHLQYPTDKG
Trigger: ACCTTTGTCCGTCGGGTATTGTAGGTGAGAATGGCATATAAGCAGAACAACCTTGCCATTAGAGAGAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597112.5
CDS CAA 72 bp ATTGTACATTTAGGAGGGATATCTGTGACCACGCCTTaGACACATTCCGGCGTTCTTGGTTTTCTTGCTATT +
Preference number: 6 (lower is better)
Translates to: IVHLGGISVTTP*THSGVLGFLAI
Trigger: AATAGCAAGAAAACCAAGAACGCCGGAATGTGTCAAAGGCGTGGTCACAGATATCCCTCCTAAATGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000599247.5
ENST00000601421.5
ENST00000601982.5
ENST00000683776.1
CDS CAA 72 bp CTGCAGCTTGTCTATGATTTGAACCCTCCCCTTGATTaGGAGACTGGATTGCTCTTTTTAATACTCCCAGTT +
Preference number: 6 (lower is better)
Translates to: LQLVYDLNPPLD*ETGLLFLILPV
Trigger: AACTGGGAGTATTAAAAAGAGCAATCCAGTCTCCAAATCAAGGGGAGGGTTCAAATCATAGACAAGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596388.1
CDS TCA 72 bp TTCATAAGCTTGTTTTCTATGTCTCTTCTGTCGCGTTaGTCTCTTTTACCTTCTTTCTGGGCCATAAGCACT +
Preference number: 6 (lower is better)
Translates to: FISLFSMSLLSR*SLLPSFWAIST
Trigger: AGTGCTTATGGCCCAGAAAGAAGGTAAAAGAGATCAACGCGACAGAAGAGACATAGAAAACAAGCTTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000418871.5
ENST00000429604.5
ENST00000599056.5
ENST00000599247.5
ENST00000601421.5
ENST00000683776.1
CDS CAA 72 bp AGCTCACTTGAAATCAGTGGAGTGATAAGTATCTTTTaGTACATTAATGGGATAATTGGTGTCTGGAGCACC +
Preference number: 6 (lower is better)
Translates to: SSLEISGVISIF*YINGIIGVWST
Trigger: GGTGCTCCAGACACCAATTATCCCATTAATGTACAAAAAGATACTTATCACTCCACTGATTTCAAGTGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601421.5