RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF148 (Homo sapiens)

Ensembl gene IDs: ENSG00000163848

Ensembl transcript IDs: ENST00000360647.9, ENST00000465763.5, ENST00000468369.5, ENST00000471196.1, ENST00000484491.5, ENST00000485866.5, ENST00000492394.5, ENST00000495019.5, ENST00000496732.1, ENST00000497929.1

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATaGATTCCTACCTTGTTAAGTACCACATTTGCATGTAGACCCAAA +
Preference number: 1 (lower is better)
Translates to: NDLTDGWHPQPELRR*IPTLLSTTFACRPK
Trigger: TTTGGGTCTACATGCAAATGTGGTACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR TCA 90 bp CCCATTTTGTATCTGATCCCGAGTTTGCAGTTGAGTCCTTCCCAATaGTTTCTTAGGGAGTTGAAGAAACAACCTGCTGCAACCTTCCCA +
Preference number: 1 (lower is better)
Translates to: PILYLIPSLQLSPSQ*FLRELKKQPAATFP
Trigger: TGGGAAGGTTGCAGCAGGTTGTTTCTTCAACTCCCTAAGAAATCATTGGGAAGGACTCAACTGCAAACTCGGGATCAGATACAAAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR GCA 90 bp TTGCGGTCTTCCTCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATaGTTAGTGAAAGTGAGTACAGATGAAGTCAGATTTAGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: LRSSSILQKSGKAIQ*LVKVSTDEVRFSLS
Trigger: AGACAGGCTAAATCTGACTTCATCTGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGAGGAAGACCGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR TCA 90 bp AAAAACCCTTTAGAAGATGTTCAAGAGATACTGCCTCGCCTAACGTaGTGTTTCCAATCTTCAAACGTGAGTAGGTCCCAAGAGGAAAAG +
Preference number: 1 (lower is better)
Translates to: KNPLEDVQEILPRLT*CFQSSNVSRSQEEK
Trigger: CTTTTCCTCTTGGGACCTACTCACGTTTGAAGATTGGAAACATCACGTTAGGCGAGGCAGTATCTCTTGAACATCTTCTAAAGGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR TCA 90 bp TTTCAGATTAAATTCAGCACTACACAGTATGCCCTTGAAGTAAAATaGGGTTACCTGCTTTATTTGGATACCAAGTTCCCTTCAGACAGC +
Preference number: 1 (lower is better)
Translates to: FQIKFSTTQYALEVK*GYLLYLDTKFPSDS
Trigger: GCTGTCTGAAGGGAACTTGGTATCCAAATAAAGCAGGTAACCTCATTTTACTTCAAGGGCATACTGTGTAGTGCTGAATTTAATCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR TCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTATCCAATCTTCAAACGTaGGTAGGTCCCAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLSNLQT*VGPKRK
Trigger: TTTCCTCTTGGGACCTACTCACGTTTGAAGATTGGA...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR CAA 90 bp GATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTaGTTAAGTACCACATTTGCATGTAGACCCAAAACGTTTAAGAGC +
Preference number: 2 (lower is better)
Translates to: DGWHPQPELRRWIPT*LSTTFACRPKTFKS
Trigger: GCTCTTAAACGTTTTGGGTCTACATGCAAATGTGGTACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR TCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGTCTTCCCTTTCTTTATaGGAACAGTCTTGGGATAAC +
Preference number: 2 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWSSLSL*EQSWDN
Trigger: GTTATCCCAAGACTGTTCTCATAAAGAAAGGGAAGA...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR GCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTAAGAGAAAAATACCAATaGCTATTTAGGGTGAGCACA +
Preference number: 2 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLREKYQ*LFRVST
Trigger: TGTGCTCACCCTAAATAGGCATTGGTATTTTTCTCT...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR GCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGCAACACCTGAAAGTCTaGTTGCATAACTACCATTTT +
Preference number: 2 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWQHLKV*LHNYHF
Trigger: AAAATGGTAGTTATGCAAGCAGACTTTCAGGTGTTG...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR TCA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATAACTCAGATTCCCTGCTaGAGTGCAATGACTATGCTG +
Preference number: 2 (lower is better)
Translates to: PVSPATSIMLCKQCYVPITQIPC*SAMTML
Trigger: CAGCATAGTCATTGCACTTCAGCAGGGAATCTGAGT...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR TCA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATACTCCATGTTTCAATCTaGAGCAGCACACAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: PVSPATSIMLCKQCYVPILHVSI*SSTQGY
Trigger: GTAGCCTTGTGTGCTGCTTCAGATTGAAACATGGAG...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACACTGCCTCGCCTAACGTaGTGTTTCCAATCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTLPRLT*CFQSSN
Trigger: GTTTGAAGATTGGAAACATCACGTTAGGCGAGGCAG...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACACAGGAATGCAACACCTaGAAGTCTGCTTGCATAACT +
Preference number: 2 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTQECNT*KSACIT
Trigger: AGTTATGCAAGCAGACTTTCAGGTGTTGCATTCCTG...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR TCA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATAACTTCCATAGAGAAGTaGCTGCTTCAACAGTTGTGT +
Preference number: 2 (lower is better)
Translates to: PVSPATSIMLCKQCYVPITSIEK*LLQQLC
Trigger: ACACAACTGTTGAAGCAGTCACTTCTCTATGGAAGT...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR GCA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGCAAGCTCACCCTAAATaGTCAGCAAGAGTCACATTC +
Preference number: 2 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMQAHPK*SARVTF
Trigger: GAATGTGACTCTTGCTGAGCATTTAGGGTGAGCTTG...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR CCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGATTAACTTGGTGTGGGTaGAATAGCAAGTTTCTGATC +
Preference number: 2 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRLTWCG*NSKFLI
Trigger: GATCAGAAACTTGCTATTCCACCCACACCAAGTTAA...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR-3UTR GCA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGCCACTGTATCAAAATTaGATCAAGTTCTCCATGAAC +
Preference number: 2 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMPLYQN*IKFSMN
Trigger: GTTCATGGAGAACTTGATGCAATTTTGATACAGTGG...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR CAA 90 bp TTGGATTATCTTGCTATTCATATCAGCTTAACTTGTTATTACGCATaGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTAACCCC +
Preference number: 2 (lower is better)
Translates to: LDYLAIHISLTCYYA*LLNLYSTPFTQSNP
Trigger: GGGGTTACTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATATGAATAGCAAGATAATCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
3UTR-3UTR CCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTTTTTCCTTTTTAACTTaGTGTGGGTGGAATAGCAAG +
Preference number: 2 (lower is better)
Translates to: VTASTVVCFGKSSESMHIFSFLT*CGWNSK
Trigger: CTTGCTATTCCACCCACACCAAGTTAAAAAGGAAAA...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR GCA 72 bp CACATCCCTTCCTTCAGTGTGATGGGCACTAAGTTTTaGGGTCTTCCTCCATCTTGCAGAAGAGTGGTAAGG +
Preference number: 3 (lower is better)
Translates to: HIPSFSVMGTKF*GLPPSCRRVVR
Trigger: CCTTACCACTCTTCTGCAAGATGGAGGAAGACCGCAAAACTTAGTGCCCATCACACTGAAGGAAGGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR GCA 72 bp AGAAACAACCTGCTGCAACCTTCCCAAGACACACGATaGCCCCCTTTCCCTCGGAAATTTGCTCTAGCATTT +
Preference number: 3 (lower is better)
Translates to: RNNLLQPSQDTR*PPFPRKFALAF
Trigger: AAATGCTAGAGCAAATTTCCGAGGGAAAGGGGGGCATCGTGTGTCTTGGGAAGGTTGCAGCAGGTTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR CCA 72 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATaGATTCCTACCTTGTTAAGTACCACATTTGCATGT +
Preference number: 3 (lower is better)
Translates to: TDGWHPQPELRR*IPTLLSTTFAC
Trigger: ACATGCAAATGTGGTACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR CCA 72 bp CTTACAATGCATCCCGCTGGTCACAAGCTAGGGTACTaGCAAGGTGGTAGATGGATGAAAACAAATCTCCAC +
Preference number: 3 (lower is better)
Translates to: LTMHPAGHKLGY*QGGRWMKTNLH
Trigger: GTGGAGATTTGTTTTCATCCATCTACCACCTTGCCAGTACCCTAGCTTGTGACCAGCGGGATGCATTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR TCA 72 bp TATCTGATCCCGAGTTTGCAGTTGAGTCCTTCCCAATaGTTTCTTAGGGAGTTGAAGAAACAACCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: YLIPSLQLSPSQ*FLRELKKQPAA
Trigger: TGCAGCAGGTTGTTTCTTCAACTCCCTAAGAAATCATTGGGAAGGACTCAACTGCAAACTCGGGATCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR TCA 72 bp TTAGAAGATGTTCAAGAGATACTGCCTCGCCTAACGTaGTGTTTCCAATCTTCAAACGTGAGTAGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: LEDVQEILPRLT*CFQSSNVSRSQ
Trigger: TTGGGACCTACTCACGTTTGAAGATTGGAAACATCACGTTAGGCGAGGCAGTATCTCTTGAACATCTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR GCA 72 bp TCCTCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATaGTTAGTGAAAGTGAGTACAGATGAAGTCAGATTT +
Preference number: 3 (lower is better)
Translates to: SSILQKSGKAIQ*LVKVSTDEVRF
Trigger: AAATCTGACTTCATCTGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR GCA 72 bp AATGTGTTGAAAACAGGAATGCAACACCTGAAAGTCTaGTTGCATAACTACCATTTTCAAAGGCCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: NVLKTGMQHLKV*LHNYHFQRPSF
Trigger: GAAGGAAGGCCTTTGAAAATGGTAGTTATGCAAGCAGACTTTCAGGTGTTGCATTCCTGTTTTCAACACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR TCA 72 bp AAATTCAGCACTACACAGTATGCCCTTGAAGTAAAATaGGGTTACCTGCTTTATTTGGATACCAAGTTCCCT +
Preference number: 3 (lower is better)
Translates to: KFSTTQYALEVK*GYLLYLDTKFP
Trigger: AGGGAACTTGGTATCCAAATAAAGCAGGTAACCTCATTTTACTTCAAGGGCATACTGTGTAGTGCTGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACACGCGCGGTCACCGACTaGAGGCGGCGGCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTRAVTD*RRRQLQ
Trigger: TTGGAGCTGCCGCCGCCTGCAGTCGGTGACCGCGCG...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGTCCCAAGACACACGATaGCCCCCTTTCCCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWSQDTR*PPFPRK
Trigger: TTTCCGAGGGAAAGGGGGGCATCGTGTGTCTTGGGA...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTATTCAGCACTTGTCCCTaGTCCCCGAAGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLFSTCP*SPKVHL
Trigger: CAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAA...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGCGCGCGGTCACCGACTaGAGGCGGCGGCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTRAVTD*RRRQLQ
Trigger: TTGGAGCTGCCGCCGCCTGCAGTCGGTGACCGCGCG...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTAGGAGAACTTTTGCTGTaGCAGCTTCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLGELLL*QLRQQL
Trigger: GAGCTGTTGCCGAAGCTGCCACAGCAAAAGTTCTCC...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTATCCCTTCCTTCAGTGTaGTGGGCACTAAGTTTTGCG +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLSLPSV*WALSFA
Trigger: CGCAAAACTTAGTGCCCATCACACTGAAGGAAGGGA...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTAACTCAGATTCCCTGCTaGAGTGCAATGACTATGCTG +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLTQIPC*SAMTML
Trigger: CAGCATAGTCATTGCACTTCAGCAGGGAATCTGAGT...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGCCTGAGCACAATTCTTaGCATAACTGCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWPEHNS*HNCLLP
Trigger: AGGCAGAAGGCAGTTATGTCAAGAATTGTGCTCAGG...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGCGCGCGGTCACCGACTaGAGGCGGCGGCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQRAVTD*RRRQLQ
Trigger: TTGGAGCTGCCGCCGCCTGCAGTCGGTGACCGCGCG...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGAAGGCTGAGAAGCTATaGTACCCACATTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWKAEKL*YPHSAH
Trigger: ATGCGCTGAATGTGGGTACCATAGCTTCTCAGCCTT...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGGAATGCTGGCTGATTTaGGAGGGTCTGGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWECWLI*EGLVIS
Trigger: ACTGATAACCAGACCCTCCCAAATCAGCCAGCATTC...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTACAGTATCTGCAACACTaGAGGATATCTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLQYLQH*RISHAV
Trigger: GACAGCATGAGATATCCTTCAGTGTTGCAGATACTG...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTATTAGCCTGTCTCCCCTaGAACTTCAATTATGCTGTG +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLLACLP*NFNYAV
Trigger: CACAGCATAATTGAAGTTGCAGGGGAGACAGGCTAA...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTACCTTCTGAACCAAAGTaGGGAAATCCAAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLPSEPK*GNPKLL
Trigger: CAACAGTTTTGGATTTCCCCACTTTGGTTCAGAAGG...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTATGGCAAGGTGGTAGATaGATGAAAACAAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLWQGGR*MKTNLH
Trigger: GTGGAGATTTGTTTTCATCCATCTACCACCTTGCCA...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACAATGCGAGCCCCCAACTaGCGAATGTGGCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTMRAPN*RMWHFN
Trigger: GTTGAAATGCCACATTCGTCAGTTGGGGGCTCGCAT...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACACATTCTCTGACGGGGTaGCCTCTGGTACTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTHSLTG*PLVLLK
Trigger: CTTCAGAAGTACCAGAGGTCACCCCGTCAGAGAATG...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACAAGCTATTCCAGCTCTTaGTCCATGATAGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTSYSSS*SMIGST
Trigger: CGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCT...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCATCTGATCAGCTaGGAAACCAAGCTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWIHLIS*ETKLEK
Trigger: TTTTTCAAGCTTGGTTTCTCAGCTGATCAGATGAAT...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTAACAGCTCCCACCCCTaGGCCTTTCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWINSSHP*AFLLFL
Trigger: GAGGAAGAGGAGAAAGGCGCAGGGGTGGGAGCTGTT...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360647.9
ENST00000468369.5
CDS-3UTR GCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGAGAGAAAAATACCAATaGCTATTTAGGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWREKYQ*LFRVST
Trigger: TGTGCTCACCCTAAATAGGCATTGGTATTTTTCTCT...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTTCAGCACTTGTCCCTaGTCCCCGAAGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTFSTCP*SPKVHL
Trigger: CAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGACCTGACCGATGGCTaGCACCCTCAGCCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIDLTDG*HPQPEL
Trigger: TAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR CAA 72 bp CACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTaGTTAAGTACCACATTTGCATGTAGACCCAAAACG +
Preference number: 4 (lower is better)
Translates to: HPQPELRRWIPT*LSTTFACRPKT
Trigger: CGTTTTGGGTCTACATGCAAATGTGGTACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGATGCGAGCCCCCAACTaGCGAATGTGGCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTMRAPN*RMWHFN
Trigger: GTTGAAATGCCACATTCGTCAGTTGGGGGCTCGCAT...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTAACAGCTCCCACCCCTaGGCCTTTCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHINSSHP*AFLLFL
Trigger: GAGGAAGAGGAGAAAGGCGCAGGGGTGGGAGCTGTT...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGAGACGCATCTTCTAAATaGGAGCCCCCAACTGACGAA +
Preference number: 4 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRDASSK*EPPTDE
Trigger: TTCGTCAGTTGGGGGCTCGCATTTAGAAGATGCGTC...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTTCAGCACTTGTCCCTaGTCCCCGAAGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIFSTCP*SPKVHL
Trigger: CAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGGTCAATAAGTTATGCTaGCTGAGTATCACTTATCTA +
Preference number: 4 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWVNKLC*LSITYL
Trigger: TAGATAAGTGATACTCAGCCAGCATAACTTATTGAC...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTCATTCTCTGACGGGGTaGCCTCTGGTACTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIHSLTG*PLVLLK
Trigger: CTTCAGAAGTACCAGAGGTCACCCCGTCAGAGAATG...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGAAGAGAATGCTGGCTaGTTTGGGAGGGTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTEENAG*FGRVWL
Trigger: TAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAGCTATTCCAGCTCTTaGTCCATGATAGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTSYSSS*SMIGST
Trigger: CGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCT...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATCCAATCTTCAAACGTaGGTAGGTCCCAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTSNLQT*VGPKRK
Trigger: TTTCCTCTTGGGACCTACTCACGTTTGAAGATTGGA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGACTGCCTTCTGCCTCTTaGGATAAAAATGACCTGACC +
Preference number: 4 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRLPSAS*DKNDLT
Trigger: GGTCAGGTCATTTTTATCTCAAGAGGCAGAAGGCAG...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACAGTTCTGTCCAAAGCCTaGTGCAGAAACTTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTVLSKA*CRNLEY
Trigger: ATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAAC...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATACAAGCTCACCCTAAATaGTCAGCAAGAGTCACATTC +
Preference number: 4 (lower is better)
Translates to: PVSPATSIMLCKQCYVPIQAHPK*SARVTF
Trigger: GAATGTGACTCTTGCTGAGCATTTAGGGTGAGCTTG...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGAATGGGCACTAAGTTTTaGGGTCTTCCTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRMGTKF*GLPPSC
Trigger: GCAAGATGGAGGAAGACCGCAAAACTTAGTGCCCAT...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGGGAGAACTTTTGCTGTaGCAGCTTCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEGELLL*QLRQQL
Trigger: GAGCTGTTGCCGAAGCTGCCACAGCAAAAGTTCTCC...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGGAGAACTTTTGCTGTaGCAGCTTCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIGELLL*QLRQQL
Trigger: GAGCTGTTGCCGAAGCTGCCACAGCAAAAGTTCTCC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACGGAGAACTTTTGCTGTaGCAGCTTCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNGELLL*QLRQQL
Trigger: GAGCTGTTGCCGAAGCTGCCACAGCAAAAGTTCTCC...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCCAGACACAGTAGACTaGCCAGACACTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEPDTVD*PDTPPI
Trigger: AATGGGTGGAGTGTCTGGCCAGTCTACTGTGTCTGG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCCAGACACAGTAGACTaGCCAGACACTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIPDTVD*PDTPPI
Trigger: AATGGGTGGAGTGTCTGGCCAGTCTACTGTGTCTGG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCCAGACACAGTAGACTaGCCAGACACTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNPDTVD*PDTPPI
Trigger: AATGGGTGGAGTGTCTGGCCAGTCTACTGTGTCTGG...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATACCTGCTGCAGAAACTTaGAGTATTCCTGCAACATGT +
Preference number: 4 (lower is better)
Translates to: PVSPATSIMLCKQCYVPIPAAET*SIPATC
Trigger: ACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGG...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTTCAGCACTTGTCCCTaGTCCCCGAAGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQFSTCP*SPKVHL
Trigger: CAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGAGTGTCTCTCCTCTGTaGAAACGAAATCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMSVSPL*KRNPAL
Trigger: CAGGGCAGGATTTCGTTTCCACAGAGGAGAGACACT...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
3UTR CAA 72 bp GTGTTGAAAACAGGAATGCAACACCTGAAAGTCTGCTaGCATAACTACCATTTTCAAAGGCCTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VLKTGMQHLKVC*HNYHFQRPSFP
Trigger: TGGGAAGGAAGGCCTTTGAAAATGGTAGTTATGCAAGCAGACTTTCAGGTGTTGCATTCCTGTTTTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGCCAGATCACGTGCTTaGATTTCCAAGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTARSRA*ISKLLI
Trigger: AATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTATGCGAGCCCCCAACTaGCGAATGTGGCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIMRAPN*RMWHFN
Trigger: GTTGAAATGCCACATTCGTCAGTTGGGGGCTCGCAT...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATTGTTACTTGCTGCTTaGAGATACCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTLLLAA*RYRFFF
Trigger: GAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGATGGTACTTTCATCAATaGCACTTGCCACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRWYFHQ*HLPQLL
Trigger: AAGCAGCTGTGGCAAGTGTCATTGATGAAAGTACCA...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGCATTCTCTGACGGGGTaGCCTCTGGTACTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQHSLTG*PLVLLK
Trigger: CTTCAGAAGTACCAGAGGTCACCCCGTCAGAGAATG...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTGAAGAGAATGCTGGCTaGTTTGGGAGGGTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIEENAG*FGRVWL
Trigger: TAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTC...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATGGAGAATTCATTCCTaGTCGAAAGCTATTGATGGG +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTWRIHS*SKAIDG
Trigger: CCCATCAATAGCTTTCGATCAGGAATGAATTCTCCA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCAGCTATTCCAGCTCTTaGTCCATGATAGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIISYSSS*SMIGST
Trigger: CGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCT...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATTGGCAGTGCTAAATTaGGTAGCTATTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTLAVLN*VAIPAL
Trigger: AAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCAGTTGTGGCATCAGGTaGAGATGTCATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIISCGIR*RCHPSS
Trigger: AGAGCTGGGATGACATCTTCACCTGATGCCACAACT...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACAGTTGTGGCATCAGGTaGAGATGTCATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNSCGIR*RCHPSS
Trigger: AGAGCTGGGATGACATCTTCACCTGATGCCACAACT...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGAGTTGTGGCATCAGGTaGAGATGTCATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTESCGIR*RCHPSS
Trigger: AGAGCTGGGATGACATCTTCACCTGATGCCACAACT...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGAGATAAAAATGACCTaGCCGATGGCTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQEIKMT*PMAGTL
Trigger: GAGGGTGCCAGCCATCGGTCAGGTCATTTTTATCTC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACTCCCGCCAGATCACGTaGTTGAATTTCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNSRQIT*LNFQAA
Trigger: AGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGA...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTCCCGCCAGATCACGTaGTTGAATTTCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIISRQIT*LNFQAA
Trigger: AGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTGACGCATCTTCTAAATaGGAGCCCCCAACTGACGAA +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIDASSK*EPPTDE
Trigger: TTCGTCAGTTGGGGGCTCGCATTTAGAAGATGCGTC...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGACGCATCTTCTAAATaGGAGCCCCCAACTGACGAA +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIDASSK*EPPTDE
Trigger: TTCGTCAGTTGGGGGCTCGCATTTAGAAGATGCGTC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGACACTTGCCACAGCTaGTTGTGTTACAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIDTCHS*LCYRRL
Trigger: CAGCCTTCTGTAACACAAGCAGCTGTGGCAAGTGTC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGTCTATGGAAGAGAATaGTGGCTGATTTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTVYGRE*WLIWEG
Trigger: ACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGAC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCACCTTAATCACTTATaGCATCCGATTCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIHLNHL*HPIPRA
Trigger: CGCCCGCGGAATCGGATGGCATAAGTGATTAAGGTG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492394.5
CDS-3UTR CCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACACCTGTGACTCTAATATaGATGCCGTGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTPVTLI*MPWYFH
Trigger: ATGAAAGTACCACGGCATCCATATTAGAGTCACAGG...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAGTCTGGCCAGTTGTaGCATCAGGTGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTKSGQL*HQVKMS
Trigger: TGACATCTTCACCTGATGCCACAACTGGCCAGACTT...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
3UTR CAA 72 bp AGTAGGTCCCAAGAGGAAAAGCACACCTCACTCAGATaGATCAAAAGTTTAAGGGTGTACCAGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: SRSQEEKHTSLR*IKSLRVYQHVF
Trigger: AAAAACATGCTGGTACACCCTTAAACTTTTGATCAATCTGAGTGAGGTGTGCTTTTCCTCTTGGGACCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGCAGGTACTTCTGTATaGAACGCATGTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTAGTSV*NACHID
Trigger: GTCAATGTGACATGCGTTTCATACAGAAGTACCTGC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGATCAGAAGGCCACCTTTaGTGGCACATCTATTTAGTT +
Preference number: 4 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRSEGHL*WHIYLV
Trigger: AACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGA...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACTGTGTTACAGAAGGCTaGGAAGCTATGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNCVTEG*EAMVPT
Trigger: TGTGGGTACCATAGCTTCTCAGCCTTCTGTAACACA...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTGGTACTTTCATCAATaGCACTTGCCACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTWYFHQ*HLPQLL
Trigger: AAGCAGCTGTGGCAAGTGTCATTGATGAAAGTACCA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGCAGTATCTGCAACACTaGAGGATATCTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTQYLQH*RISHAV
Trigger: GACAGCATGAGATATCCTTCAGTGTTGCAGATACTG...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGAAGAGAATGCTGGCTaGTTTGGGAGGGTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQEENAG*FGRVWL
Trigger: TAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCTGATCGAAAGCTATTaGTGGGCATGGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTELIESY*WAWWHR
Trigger: TCTATGCCACCATGCCCATCAATAGCTTTCGATCAG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCTGATCGAAAGCTATTaGTGGGCATGGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNLIESY*WAWWHR
Trigger: TCTATGCCACCATGCCCATCAATAGCTTTCGATCAG...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGATCAGGATGTGCATTGTaGCAACGATGGCAGAAAATT +
Preference number: 4 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRSGCAL*QRWQKI
Trigger: AATTTTCTGCCATCGTTGTCACAATGCACATCCTGA...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCTGCCTCGCCTAACGTaGTGTTTCCAATCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIILPRLT*CFQSSN
Trigger: GTTTGAAGATTGGAAACATCACGTTAGGCGAGGCAG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATAATTTCACAATGGAGCTaGAGTCACCTCAAAACTTAC +
Preference number: 4 (lower is better)
Translates to: PVSPATSIMLCKQCYVPIISQWS*SHLKTY
Trigger: GTAAGTTTTGAGGTGACTTCAGCTCCATTGTGAAAT...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTCCCGAGTTTGCAGTTaGGTCCTTCCCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWISRVCS*VLPNDF
Trigger: GAAATCATTGGGAAGGACTCAACTGCAAACTCGGGA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTCCCGCCAGATCACGTaGTTGAATTTCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQSRQIT*LNFQAA
Trigger: AGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATTGTCCTGGAAGACTaGATTTCGTCTATGCCGCCA +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIIVLED*ISSMPP
Trigger: TGGCGGCATAGACGAAATGCAGTCTTCCAGGACAAT...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGCCTGCTGTTGTTACTTaGTGCTTGAAGATACCGCTT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTPAVVT*CLKIPL
Trigger: AAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGG...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGACACTTGCCACAGCTaGTTGTGTTACAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIDTCHS*LCYRRL
Trigger: CAGCCTTCTGTAACACAAGCAGCTGTGGCAAGTGTC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGTTCTGTCCAAAGCCTaGTGCAGAAACTTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTVLSKA*CRNLEY
Trigger: ATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAAC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGGTCTTCCTCCATCTTaGAGAAGAGTGGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIGLPPS*RRVVRP
Trigger: TGGCCTTACCACTCTTCTGCAAGATGGAGGAAGACC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCAAGGCTGAGAAGCTATaGTACCCACATTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIKAEKL*YPHSAH
Trigger: ATGCGCTGAATGTGGGTACCATAGCTTCTCAGCCTT...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACGAATGCTGGCTGATTTaGGAGGGTCTGGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNECWLI*EGLVIS
Trigger: ACTGATAACCAGACCCTCCCAAATCAGCCAGCATTC...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTATGGAAGAGAATGCTaGCTGATTTGGGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIYGREC*LIWEGL
Trigger: CAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTATGGAAGAGAATGCTaGCTGATTTGGGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIYGREC*LIWEGL
Trigger: CAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGATGTGGCAGAAGCATaGTTTGTCTCATCACCTGAA +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTDVAEA*FVSSPE
Trigger: TTCAGGTGATGAGACAAACCATGCTTCTGCCACATC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCAAGTCTGGCCAGTTGTaGCATCAGGTGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIKSGQL*HQVKMS
Trigger: TGACATCTTCACCTGATGCCACAACTGGCCAGACTT...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACAAGTCTGGCCAGTTGTaGCATCAGGTGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNKSGQL*HQVKMS
Trigger: TGACATCTTCACCTGATGCCACAACTGGCCAGACTT...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATTTAAATTTGTTCCATaGACCCAGACTGCACTCCTA +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTFKFVP*TQTALL
Trigger: TAGGAGTGCAGTCTGGGTCCATGGAACAAATTTAAA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGCCAGATCACGTGCTTaGATTTCCAAGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQARSRA*ISKLLI
Trigger: AATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTCTCCTCATGGACCATaGGTTCATCATGTGATATCA +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTSPHGP*VHHVIS
Trigger: TGATATCACATGATGAACTCATGGTCCATGAGGAGA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGGCAGGTACTTCTGTATaGAACGCATGTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEAGTSV*NACHID
Trigger: GTCAATGTGACATGCGTTTCATACAGAAGTACCTGC...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGCAGGTACTTCTGTATaGAACGCATGTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIAGTSV*NACHID
Trigger: GTCAATGTGACATGCGTTTCATACAGAAGTACCTGC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTCAGAAGGCCACCTTTaGTGGCACATCTATTTAGTT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTSEGHL*WHIYLV
Trigger: AACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTTGTGTTACAGAAGGCTaGGAAGCTATGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHICVTEG*EAMVPT
Trigger: TGTGGGTACCATAGCTTCTCAGCCTTCTGTAACACA...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTGTGTTACAGAAGGCTaGGAAGCTATGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSICVTEG*EAMVPT
Trigger: TGTGGGTACCATAGCTTCTCAGCCTTCTGTAACACA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAGTATCTGCAACACTaGAGGATATCTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNQYLQH*RISHAV
Trigger: GACAGCATGAGATATCCTTCAGTGTTGCAGATACTG...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCTGATCGAAAGCTATTaGTGGGCATGGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSILIESY*WAWWHR
Trigger: TCTATGCCACCATGCCCATCAATAGCTTTCGATCAG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTGGAGAATTCATTCCTaGTCGAAAGCTATTGATGGG +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTWRIHS*SKAIDG
Trigger: CCCATCAATAGCTTTCGATCAGGAATGAATTCTCCA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTTGGCAGTGCTAAATTaGGTAGCTATTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTLAVLN*VAIPAL
Trigger: AAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCAGGAATGCAACACCTaGAAGTCTGCTTGCATAACT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIQECNT*KSACIT
Trigger: AGTTATGCAAGCAGACTTTCAGGTGTTGCATTCCTG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCTCCATGTTTCAATCTaGAGCAGCACACAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSILHVSI*SSTQGY
Trigger: GTAGCCTTGTGTGCTGCTTCAGATTGAAACATGGAG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTTGAGTCCTTCCCAATaGTTTCTTAGGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTLSPSQ*FLRELK
Trigger: CTTCAACTCCCTAAGAAATCATTGGGAAGGACTCAA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGATTGTCCTGGAAGACTaGATTTCGTCTATGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQIVLED*ISSMPP
Trigger: TGGCGGCATAGACGAAATGCAGTCTTCCAGGACAAT...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGATCAATGTCAGCATTaGCTTCTGAGTCCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTDQCQH*LLSPVK
Trigger: CTTTACTGGACTCAGAAGGCAATGCTGACATTGATC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTCCTGCTGTTGTTACTTaGTGCTTGAAGATACCGCTT +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIPAVVT*CLKIPL
Trigger: AAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGG...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTCAGCGCATATTCCCTaGTGTTGTTACTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWISAHIP*CCYLLL
Trigger: AAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTCAGCGCATATTCCCTaGTGTTGTTACTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIISAHIP*CCYLLL
Trigger: AAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTCAGCGCATATTCCCTaGTGTTGTTACTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTESAHIP*CCYLLL
Trigger: AAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGTCTATGGAAGAGAATaGTGGCTGATTTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQVYGRE*WLIWEG
Trigger: ACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGAC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGAGATTCCCTGCTGAAGTaGAATGACTATGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRDSLLK*NDYAEK
Trigger: TTTTTCAGCATAGTCATTGCACTTCAGCAGGGAATC...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACACAACACCTGAAAGTCTaGTTGCATAACTACCATTTT +
Preference number: 4 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTQHLKV*LHNYHF
Trigger: AAAATGGTAGTTATGCAAGCAGACTTTCAGGTGTTG...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTAAGGCTGAGAAGCTATaGTACCCACATTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIKAEKL*YPHSAH
Trigger: ATGCGCTGAATGTGGGTACCATAGCTTCTCAGCCTT...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGCCTGTGACTCTAATATaGATGCCGTGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTPVTLI*MPWYFH
Trigger: ATGAAAGTACCACGGCATCCATATTAGAGTCACAGG...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTCTGATGAGGATGCTTaGGAGCTTGATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWISDEDA*ELDPTF
Trigger: GAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCCTGCTGCAGAAACTTaGAGTATTCCTGCAACATGT +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNPAAET*SIPATC
Trigger: ACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGG...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCCTGCTGCAGAAACTTaGAGTATTCCTGCAACATGT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEPAAET*SIPATC
Trigger: ACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGAATGCTGGCTGATTTaGGAGGGTCTGGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIECWLI*EGLVIS
Trigger: ACTGATAACCAGACCCTCCCAAATCAGCCAGCATTC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTAGACCTGCTTGTCTATaGAAGAGAATGCTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIRPACL*KRMLAD
Trigger: ATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTCT...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACAGACCTGCTTGTCTATaGAAGAGAATGCTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNRPACL*KRMLAD
Trigger: ATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTCT...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTGGCATACTTCGATCTTaGAGTACTGAATCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIGILRS*STESCS
Trigger: GCTACAGGATTCAGTACTTCAAGATCGAAGTATGCC...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGGCATACTTCGATCTTaGAGTACTGAATCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQGILRS*STESCS
Trigger: GCTACAGGATTCAGTACTTCAAGATCGAAGTATGCC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGGCATACTTCGATCTTaGAGTACTGAATCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIGILRS*STESCS
Trigger: GCTACAGGATTCAGTACTTCAAGATCGAAGTATGCC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTCTCCTCATGGACCATaGGTTCATCATGTGATATCA +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIISPHGP*VHHVIS
Trigger: TGATATCACATGATGAACTCATGGTCCATGAGGAGA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTCTCCTCATGGACCATaGGTTCATCATGTGATATCA +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTESPHGP*VHHVIS
Trigger: TGATATCACATGATGAACTCATGGTCCATGAGGAGA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCAGTGCTCACAAACGTaGGATTTAGGGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEQCSQT*DLGVFK
Trigger: TTTGAAAACCCCTAAATCTCACGTTTGTGAGCACTG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCAGTGCTCACAAACGTaGGATTTAGGGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIQCSQT*DLGVFK
Trigger: TTTGAAAACCCCTAAATCTCACGTTTGTGAGCACTG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGCAGGTACTTCTGTATaGAACGCATGTCACATTGAC +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQAGTSV*NACHID
Trigger: GTCAATGTGACATGCGTTTCATACAGAAGTACCTGC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTCAGAAGGCCACCTTTaGTGGCACATCTATTTAGTT +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWISEGHL*WHIYLV
Trigger: AACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGAAAGGTGAAATTGTTTaGTTTTGCTCCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMKGEIV*FCSSGC
Trigger: ACAGCCACTGGAGCAAAATCAAACAATTTCACCTTT...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTGCAAATTATCAACCTaGTCAATGTCAGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTCKLST*SMSALP
Trigger: AGGCAATGCTGACATTGATCAGGTTGATAATTTGCA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTTGTTACTTGCTGCTTaGAGATACCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIILLLAA*RYRFFF
Trigger: GAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTGGTACTTTCATCAATaGCACTTGCCACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIWYFHQ*HLPQLL
Trigger: AAGCAGCTGTGGCAAGTGTCATTGATGAAAGTACCA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTTGGCAGTGCTAAATTaGGTAGCTATTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTELAVLN*VAIPAL
Trigger: AAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGGCCCTTGAAGTAAAATaGGGTTACCTGCTTTATTTG +
Preference number: 4 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMALEVK*GYLLYL
Trigger: CAAATAAAGCAGGTAACCTCATTTTACTTCAAGGGC...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGATCAATGTCAGCATTaGCTTCTGAGTCCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIDQCQH*LLSPVK
Trigger: CTTTACTGGACTCAGAAGGCAATGCTGACATTGATC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGTTCTGTCCAAAGCCTaGTGCAGAAACTTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQVLSKA*CRNLEY
Trigger: ATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAAC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTCAGAAAATTCAACGTaGTCCACCATCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIISENST*STIRIS
Trigger: GGAAATCCTGATGGTGGAGCACGTTGAATTTTCTGA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTTCACTGTCTCCTCATaGACCATGAGTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEFTVSS*TMSSSC
Trigger: ACATGATGAACTCATGGTCCATGAGGAGACAGTGAA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTATGCACAGGTTTACTaGGCCCCTCCTGCAAATTAT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIYAQVY*APPANY
Trigger: ATAATTTGCAGGAGGGGCCCAGTAAACCTGTGCATA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTATGCACAGGTTTACTaGGCCCCTCCTGCAAATTAT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQYAQVY*APPANY
Trigger: ATAATTTGCAGGAGGGGCCCAGTAAACCTGTGCATA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCCTGTGACTCTAATATaGATGCCGTGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIPVTLI*MPWYFH
Trigger: ATGAAAGTACCACGGCATCCATATTAGAGTCACAGG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTCTGATGAGGATGCTTaGGAGCTTGATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQSDEDA*ELDPTF
Trigger: GAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTCTGATGAGGATGCTTaGGAGCTTGATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSISDEDA*ELDPTF
Trigger: GAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTGATGTGGCAGAAGCATaGTTTGTCTCATCACCTGAA +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIDVAEA*FVSSPE
Trigger: TTCAGGTGATGAGACAAACCATGCTTCTGCCACATC...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGATGTGGCAGAAGCATaGTTTGTCTCATCACCTGAA +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIDVAEA*FVSSPE
Trigger: TTCAGGTGATGAGACAAACCATGCTTCTGCCACATC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGGGTTTTCAAACCAAGTaGTCCATCCTCATTTATTGT +
Preference number: 4 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMGFQTK*SILIYC
Trigger: ACAATAAATGAGGATGGATCACTTGGTTTGAAAACC...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGGTTTTCAAACCAAGTaGTCCATCCTCATTTATTGT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTGFQTK*SILIYC
Trigger: ACAATAAATGAGGATGGATCACTTGGTTTGAAAACC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGCAGTGCTCACAAACGTaGGATTTAGGGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQQCSQT*DLGVFK
Trigger: TTTGAAAACCCCTAAATCTCACGTTTGTGAGCACTG...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCAAAGGTGAAATTGTTTaGTTTTGCTCCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIKGEIV*FCSSGC
Trigger: ACAGCCACTGGAGCAAAATCAAACAATTTCACCTTT...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTTGTTACTTGCTGCTTaGAGATACCGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQLLLAA*RYRFFF
Trigger: GAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTGGAGAATTCATTCCTaGTCGAAAGCTATTGATGGG +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIWRIHS*SKAIDG
Trigger: CCCATCAATAGCTTTCGATCAGGAATGAATTCTCCA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGCATCAAGTTCTCCATaGACAAAATTTTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTASSSP*TKFLIR
Trigger: CCTGATCAAAAATTTTGTTCATGGAGAACTTGATGC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCAGTGTACTAAAAAGTaGCAGAAGTGGACTAGCAAA +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIQCTKK*QKWTSK
Trigger: TTTGCTAGTCCACTTCTGTCACTTTTTAGTACACTG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCATCTCTATGTTCCATaGCTATGCATGAAACAAGCT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEHLYVP*LCMKQA
Trigger: AGCTTGTTTCATGCATAGTCATGGAACATAGAGATG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCACCTTAATCACTTATaGCATCCGATTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIHLNHL*HPIPPL
Trigger: TAATGGAGGAATCGGATGGCATAAGTGATTAAGGTG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTGTCGTCAATGTTCATaGTTAAGTATAACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWICRQCS*LSITAR
Trigger: TCGGGCAGTTATACTTAAGCATGAACATTGACGACA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360647.9
ENST00000492394.5
CDS-3UTR GCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACTATTGTAAGGATTTTTaGGGGAGAACGTTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNYCKDF*GRTLFP
Trigger: CGGAAACAACGTTCTCCCGCAAAAATCCTTACAATA...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTATTGTAAGGATTTTTaGGGGAGAACGTTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEYCKDF*GRTLFP
Trigger: CGGAAACAACGTTCTCCCGCAAAAATCCTTACAATA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGATCAATGTCAGCATTaGCTTCTGAGTCCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQDQCQH*LLSPVK
Trigger: CTTTACTGGACTCAGAAGGCAATGCTGACATTGATC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAACTTGGAGTATTCCTaGAACATGTTGGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTNLEYS*NMLALS
Trigger: AGATAAAGCCAACATGTTGCAGGAATACTCCAAGTT...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTTGCTATATCAGGATGTaGATTGTGACAACGATGGCA +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHICYIRM*IVTTMA
Trigger: TGCCATCGTTGTCACAATGCACATCCTGATATAGCA...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTTACAACCATTGTCCTaGAAGACTGCATTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTELQPLS*KTAFRL
Trigger: TAGACGAAATGCAGTCTTCCAGGACAATGGTTGTAA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTTCACTGTCTCCTCATaGACCATGAGTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQFTVSS*TMSSSC
Trigger: ACATGATGAACTCATGGTCCATGAGGAGACAGTGAA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTTISPK*DLSGVV
Trigger: AACAACTCCAGATAAGTCCCACTTTGGACTAATAGT...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTTTTCCTTTTTAACTTaGTGTGGGTGGAATAGCAAG +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTFSFLT*CGWNSK
Trigger: CTTGCTATTCCACCCACACCAAGTTAAAAAGGAAAA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360647.9
ENST00000468369.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACGTTACCTGCTTTATTTaGATACCAAGTTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNVTCFI*IPSSLQ
Trigger: CTGAAGGGAACTTGGTATCCAAATAAAGCAGGTAAC...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTTTCACCTGTATGAATaGAGACATGTCTCTGTAAGT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIFHLYE*RHVSVS
Trigger: ACTTACAGAGACATGTCTTCATTCATACAGGTGAAA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTTTCACCTGTATGAATaGAGACATGTCTCTGTAAGT +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIFHLYE*RHVSVS
Trigger: ACTTACAGAGACATGTCTTCATTCATACAGGTGAAA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTGGTTTTTCACCTGTATaGATGAAGACATGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIGFSPV*MKTCLC
Trigger: ACAGAGACATGTCTTCATTCATACAGGTGAAAAACC...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGGTTTTTCACCTGTATaGATGAAGACATGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIGFSPV*MKTCLC
Trigger: ACAGAGACATGTCTTCATTCATACAGGTGAAAAACC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGGTTTTTCACCTGTATaGATGAAGACATGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQGFSPV*MKTCLC
Trigger: ACAGAGACATGTCTTCATTCATACAGGTGAAAAACC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAAAGGTGAAATTGTTTaGTTTTGCTCCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQKGEIV*FCSSGC
Trigger: ACAGCCACTGGAGCAAAATCAAACAATTTCACCTTT...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTTGCAAATTATCAACCTaGTCAATGTCAGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHICKLST*SMSALP
Trigger: AGGCAATGCTGACATTGATCAGGTTGATAATTTGCA...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTTCTTCCCTTTCTTTATaGGAACAGTCTTGGGATAAC +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHISSLSL*EQSWDN
Trigger: GTTATCCCAAGACTGTTCTCATAAAGAAAGGGAAGA...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCCCAAATTAATCAAATaGAAGAAGCGGCAAAAGATC +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNPKLIK*KKRQKI
Trigger: GATCTTTTGCCGCTTCTTTCATTTGATTAATTTGGG...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTTACACAGTATGCCCTTaGAGTAAAATGAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIYTVCP*SKMRLP
Trigger: AGGTAACCTCATTTTACTTCAAGGGCATACTGTGTA...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTTTCCATGACTATGCATaGAACAAGCTGTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIFHDYA*NKLSLY
Trigger: ATACAGTGACAGCTTGTTTCATGCATAGTCATGGAA...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTCACCTTAATCACTTATaGCATCCGATTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIHLNHL*HPIPPL
Trigger: TAATGGAGGAATCGGATGGCATAAGTGATTAAGGTG...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGCACCTTAATCACTTATaGCATCCGATTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQHLNHL*HPIPPL
Trigger: TAATGGAGGAATCGGATGGCATAAGTGATTAAGGTG...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR GCA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTTGTCTCTCATCAGTTaGTCAGATACATCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTLSLIS*SDTSVK
Trigger: TTTTACTGATGTATCTGAGCAACTGATGAGAGACAA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTATTGTAAGGATTTTTaGGGGAGAACGTTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQYCKDF*GRTLFP
Trigger: CGGAAACAACGTTCTCCCGCAAAAATCCTTACAATA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGAACTTGGAGTATTCCTaGAACATGTTGGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTENLEYS*NMLALS
Trigger: AGATAAAGCCAACATGTTGCAGGAATACTCCAAGTT...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACGAAAAGGGAAATGAGTaGTGTGAATCACCAACTATT +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNEKGNE*CESPTI
Trigger: AATAGTTGGTGATTCACAGCACTCATTTCCCTTTTC...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGAAAAGGGAAATGAGTaGTGTGAATCACCAACTATT +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIEKGNE*CESPTI
Trigger: AATAGTTGGTGATTCACAGCACTCATTTCCCTTTTC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGTTAGATTTTCACTGGTaGTATATCAGGATGTGCATT +
Preference number: 4 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMLDFHW*YIRMCI
Trigger: AATGCACATCCTGATATAGCACCAGTGAAAATCTAA...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTGGTAAGGCCATTCAATaGTTAGTGAAAGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIGKAIQ*LVKVST
Trigger: TGTACTCACTTTCACTAAGCATTGAATGGCCTTACC...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTCTGGGATCTAGGAAATaGATTAGTAGACTATCAGTG +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHILGSRK*ISRLSV
Trigger: CACTGATAGTCTACTAATGCATTTCCTAGATCCCAG...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTETISPK*DLSGVV
Trigger: AACAACTCCAGATAAGTCCCACTTTGGACTAATAGT...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWITISPK*DLSGVV
Trigger: AACAACTCCAGATAAGTCCCACTTTGGACTAATAGT...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTTAACTTGGTGTGGGTaGAATAGCAAGTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSILTWCG*NSKFLI
Trigger: GATCAGAAACTTGCTATTCCACCCACACCAAGTTAA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360647.9
ENST00000468369.5
CDS-3UTR CCA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACTTTTCCTTTTTAACTTaGTGTGGGTGGAATAGCAAG +
Preference number: 4 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNFSFLT*CGWNSK
Trigger: CTTGCTATTCCACCCACACCAAGTTAAAAAGGAAAA...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360647.9
ENST00000468369.5
CDS-3UTR CCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCCAGAGCTAAGAAGATaGATTCCTACCTTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIPELRR*IPTLLS
Trigger: ACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCATGAGTTCATCATGTaGTATCATATCCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIHEFIM*YHILLS
Trigger: AGACAACAGGATATGATATCACATGATGAACTCATG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGGGTTTTCAAACCAAGTaGTCCATCCTCATTTATTGT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQGFQTK*SILIYC
Trigger: ACAATAAATGAGGATGGATCACTTGGTTTGAAAACC...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTTTCACCTGTATGAATaGAGACATGTCTCTGTAAGT +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQFHLYE*RHVSVS
Trigger: ACTTACAGAGACATGTCTTCATTCATACAGGTGAAA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR TCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGATCACTCATCTAGCTaGAAAAGAAATGGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIDHSSS*KRNGSY
Trigger: GTAACTACCATTTCTTTTTCAGCTAGATGAGTGATC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGGTAAAAGTAATTTCCTaGTTTACGCTTATAGGGACA +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEVKVIS*FTLIGT
Trigger: TGTCCCTATAAGCGTAAAGCAGGAAATTACTTTTAC...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGTAAAAGTAATTTCCTaGTTTACGCTTATAGGGACA +
Preference number: 4 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIVKVIS*FTLIGT
Trigger: TGTCCCTATAAGCGTAAAGCAGGAAATTACTTTTAC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTGTAAAAGTAATTTCCTaGTTTACGCTTATAGGGACA +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIVKVIS*FTLIGT
Trigger: TGTCCCTATAAGCGTAAAGCAGGAAATTACTTTTAC...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTTGTCTCTCATCAGTTaGTCAGATACATCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: NLLLRIALKSVQHSIYTELSLIS*SDTSVK
Trigger: TTTTACTGATGTATCTGAGCAACTGATGAGAGACAA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGAAAAGGGAAATGAGTaGTGTGAATCACCAACTATT +
Preference number: 4 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIEKGNE*CESPTI
Trigger: AATAGTTGGTGATTCACAGCACTCATTTCCCTTTTC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTCCACTGTATCAAAATTaGATCAAGTTCTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHIPLYQN*IKFSMN
Trigger: GTTCATGGAGAACTTGATGCAATTTTGATACAGTGG...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTCTGCAACTTCAATTATaGTGTGTAAACAGTGTTACG +
Preference number: 4 (lower is better)
Translates to: VTASTVVCFGKSSESMHILQLQL*CVNSVT
Trigger: CGTAACACTGTTTACACAGCATAATTGAAGTTGCAG...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR GCA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTGTCGTCAATGTTCATaGTTAAGTATAACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWICRQCS*LSITAF
Trigger: AAAGGCAGTTATACTTAAGCATGAACATTGACGACA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484491.5
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTTGTCTCTCATCAGTTaGTCAGATACATCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQLSLIS*SDTSVK
Trigger: TTTTACTGATGTATCTGAGCAACTGATGAGAGACAA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR GCA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAACTCAAGAAATAAATaGCTACTCTCACCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQNSRNK*LLSPKE
Trigger: CTCTTTTGGTGAGAGTAGGCATTTATTTCTTGAGTT...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS GCA 90 bp GCCACTCACAAAGTTTCCCATCCCGTTGAGGGAAGGGGTCCTGACTaGGCCAGCGGGGCAGGCCCAGAAGGCGCGGTATCTGGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: ATHKVSHPVEGRGPD*ASGAGPEGAVSGRS
Trigger: GGACCTCCCAGATACCGCGCCTTCTGGGCCTGCCCCGCTGGCGCAGTCAGGACCCCTTCCCTCAACGGGATGGGAAACTTTGTGAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495019.5
CDS TCA 90 bp CGATCTACTCTGTCTAGAATACATGCCCAGAATTACACTAGGCACTaGACACAATGTAGAGGTGTGCCGCGGGCGGGCGCCGAGTCGCGC +
Preference number: 5 (lower is better)
Translates to: RSTLSRIHAQNYTRH*TQCRGVPRAGAESR
Trigger: GCGCGACTCGGCGCCCGCCCGCGGCACACCTCTACATTGTGTTCAGTGCCTAGTGTAATTCTGGGCATGTATTCTAGACAGAGTAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471196.1
CDS GCA 90 bp CCTCCATTAAATACGTTAGGCAAACGCCCATCCCGCCAGATCACGTaGTTGAATTTCCAAGCTGCTGATTCCTCCCTCTATCCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: PPLNTLGKRPSRQIT*LNFQAADSSLYPRA
Trigger: CGCCCGCGGATAGAGGGAGGAATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGATGGGCGTTTGCCTAACGTATTTAATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
CDS-3UTR CAA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTACGCCAGATCACGTGCTaGAATTTCCAAGCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLRQITC*NFQAAD
Trigger: ATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCG...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGTGGCAGAAGCATGGTTaGTCTCATCACCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWWQKHG*SHHLKR
Trigger: CCTTTTCAGGTGATGAGACAAACCATGCTTCTGCCA...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS TCA 90 bp CACCTGTCCATTGGCAGTGCTAAATTGAGTAGCTATTCCAGCTCTTaGTCCATGATAGGGAGCACGGAAGGGCTGTTCAAAGGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: HLSIGSAKLSSYSSS*SMIGSTEGLFKGAH
Trigger: ATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS GCA 90 bp CCTCCATTAAATACGTTAGGCAAACGCCCATCCCGCCAGATCACGTaGTTGAATTTCCAAGCTGCTGATTCCTCCCTCTATCCTCTACAA +
Preference number: 5 (lower is better)
Translates to: PPLNTLGKRPSRQIT*LNFQAADSSLYPLQ
Trigger: TTGTAGAGGATAGAGGGAGGAATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGATGGGCGTTTGCCTAACGTATTTAATGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465763.5
CDS CCA 90 bp GGTGGCATAGACCTGCTTGTCTATGGAAGAGAATGCTGGCTGATTTaGGAGGGTCTGGTTATCAGTCACAAAGTTAAGGCTCGGGCTATT +
Preference number: 5 (lower is better)
Translates to: GGIDLLVYGRECWLI*EGLVISHKVKARAI
Trigger: AATAGCCCGAGCCTTAACTTTGTGACTGATAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTCTATGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CCA 90 bp GATGGGCATGGTGGCATAGACCTGCTTGTCTATGGAAGAGAATGCTaGCTGATTTGGGAGGGTCTGGTTATCAGTCACAAAGTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: DGHGGIDLLVYGREC*LIWEGLVISHKVKA
Trigger: AGCCTTAACTTTGTGACTGATAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTCTATGCCACCATGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS GCA 90 bp GACTGGCCAGACACTCCACCCATTACAACCATTGTCCTGGAAGACTaGATTTCGTCTATGCCGCCACATTTAAGAAACAATCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: DWPDTPPITTIVLED*ISSMPPHLRNNPSS
Trigger: ACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCAGGACAATGGTTGTAATGGGTGGAGTGTCTGGCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000465763.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000495019.5
CDS GCA 90 bp CCTCCATTAAATACGTTAGGCAAACGCCCATCCCGCCAGATCACGTaGTTGAATTTCCAAGCTGCTGATTCCTCCCTCTATCCTTATTCA +
Preference number: 5 (lower is better)
Translates to: PPLNTLGKRPSRQIT*LNFQAADSSLYPYS
Trigger: TGAATAAGGATAGAGGGAGGAATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGATGGGCGTTTGCCTAACGTATTTAATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471196.1
CDS-3UTR CAA 90 bp ACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGATTCCTACCTTGTTATTTTGCGGGAGAACGTaGTTTCCGCTTCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: TDGWHPQPELRRWIPTLLFCGRT*FPLLLF
Trigger: AAAAAGAAGAAGCGGAAACAACGTTCTCCCGCAAAA...TAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS GCA 90 bp ATTGATGGGCATGGTGGCATAGACCTGCTTGTCTATGGAAGAGAATaGTGGCTGATTTGGGAGGGTCTGGTTATCAGTCACAAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: IDGHGGIDLLVYGRE*WLIWEGLVISHKVK
Trigger: CTTAACTTTGTGACTGATAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTCTATGCCACCATGCCCATCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS-3UTR CAA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGGCTCATTTGGTAAGCTaGGTGGACAGGCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMAHLVS*VDRLGL
Trigger: GAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGC...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGCTCATTTGGTAAGCTaGGTGGACAGGCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTAHLVS*VDRLGL
Trigger: GAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS TCA 90 bp CTACTATGCACAGGTTTACTGGGCCCCTCCTGCAAATTATCAACCTaGTCAATGTCAGCATTGCCTTCTGAGTCCAGTAAAGCCTGTTTA +
Preference number: 5 (lower is better)
Translates to: LLCTGLLGPSCKLST*SMSALPSESSKACL
Trigger: TAAACAGGCTTTACTGGACTCAGAAGGCAATGCTGACATTGATCAGGTTGATAATTTGCAGGAGGGGCCCAGTAAACCTGTGCATAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS TCA 90 bp TGTCATCCCAGCTCTATTATCATTTACATTCACCAAGGGAAATTCTaGAAATTCAGCACTTGTCCCTGGTCCCCGAAGGTTCACCTGTCC +
Preference number: 5 (lower is better)
Translates to: CHPSSIIIYIHQGKF*KFSTCPWSPKVHLS
Trigger: GGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS GCA 90 bp AGCTATGGTACCCACATTCAGCGCATATTCCCTGCTGTTGTTACTTaGTGCTTGAAGATACCGCTTCTTCTTCAAAAACTGCATGGCATC +
Preference number: 5 (lower is better)
Translates to: SYGTHIQRIFPAVVT*CLKIPLLLQKLHGI
Trigger: GATGCCATGCAGTTTTTGAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGAATGTGGGTACCATAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS-3UTR CAA 90 bp GATAAAAATGACCTGACCGATGGCTGGCACCCTCAGCCAGAGCTAAGAAGATGGGAAACGCATGTCACATaGACTACATTGAAATGGTTT +
Preference number: 5 (lower is better)
Translates to: DKNDLTDGWHPQPELRRWETHVT*TTLKWF
Trigger: AAACCATTTCAATGTAGTCAATGTGACATGCGTTTC...CCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACAGCCTGCTGCAGAAACTaGGAGTATTCCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTACCRN*EYSCNM
Trigger: CATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGC...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACGCTCATTTGGTAAGCTaGGTGGACAGGCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNAHLVS*VDRLGL
Trigger: GAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGC...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGGCTCATTTGGTAAGCTaGGTGGACAGGCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEAHLVS*VDRLGL
Trigger: GAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGC...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS GCA 90 bp TACTGGGCCCCTCCTGCAAATTATCAACCTGATCAATGTCAGCATTaGCTTCTGAGTCCAGTAAAGCCTGTTTATCCACAAGTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: YWAPPANYQPDQCQH*LLSPVKPVYPQVQK
Trigger: CTTTTGAACTTGTGGATAAACAGGCTTTACTGGACTCAGAAGGCAATGCTGACATTGATCAGGTTGATAATTTGCAGGAGGGGCCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS GCA 90 bp TATGGTACCCACATTCAGCGCATATTCCCTGCTGTTGTTACTTGCTaGTTGAAGATACCGCTTCTTCTTCAAAAACTGCATGGCATCATC +
Preference number: 5 (lower is better)
Translates to: YGTHIQRIFPAVVTC*LKIPLLLQKLHGII
Trigger: GATGATGCCATGCAGTTTTTGAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGAATGTGGGTACCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS-3UTR CAA 90 bp TTTAGATTTTCACTGGTGCTATATCAGGATGTGCATTGTGACAACGATGGCAGACAAAAGTCTGGCCAGTaGTGGCATCAGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: FRFSLVLYQDVHCDNDGRQKSGQ*WHQVKM
Trigger: CATCTTCACCTGATGCCACAACTGGCCAGACTTTTG...TCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGCGCCAGATCACGTGCTaGAATTTCCAAGCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTRQITC*NFQAAD
Trigger: ATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCG...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR CAA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATAGTCAGAAGGCCACCTTaGATGGCACATCTATTTAGT +
Preference number: 5 (lower is better)
Translates to: PVSPATSIMLCKQCYVPIVRRPP*MAHLFS
Trigger: ACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGAC...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATACTTCTGAGAAGTCACTaGATCCAGAAAGTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: PVSPATSIMLCKQCYVPILLRSH*IQKVLC
Trigger: ACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAG...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTCTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWILKIQH*SLVPEG
Trigger: ACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTELKIQH*SLVPEG
Trigger: ACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNLKIQH*SLVPEG
Trigger: ACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTCGGTCTTCCTCCATCTaGCAGAAGAGTGGTAAGGCC +
Preference number: 5 (lower is better)
Translates to: VTASTVVCFGKSSESMHIRSSSI*QKSGKA
Trigger: GGCCTTACCACTCTTCTGCAAGATGGAGGAAGACCG...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACAGTTGTTACTTGCTGCTaGAAGATACCGCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTVVTCC*KIPLLL
Trigger: AAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAAC...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGACTTGCCACAGCTGCTaGTGTTACAGAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTETCHSC*CYRRLR
Trigger: TCTCAGCCTTCTGTAACACAAGCAGCTGTGGCAAGT...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTAGGATGCTTGGGAGCTaGATCCAACATTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIRMLGS*IQHSLT
Trigger: CGTCAGAGAATGTTGGATCAAGCTCCCAAGCATCCT...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTGCCTGCTGCAGAAACTaGGAGTATTCCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIACCRN*EYSCNM
Trigger: CATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGC...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACGCCTGCTGCAGAAACTaGGAGTATTCCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNACCRN*EYSCNM
Trigger: CATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGC...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGCTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQLKIQH*SLVPEG
Trigger: ACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCAAAAGTCTGGCCAGTaGTGGCATCAGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEQKSGQ*WHQVKM
Trigger: CATCTTCACCTGATGCCACAACTGGCCAGACTTTTG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTCAAAAGTCTGGCCAGTaGTGGCATCAGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIQKSGQ*WHQVKM
Trigger: CATCTTCACCTGATGCCACAACTGGCCAGACTTTTG...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCGCCAGATCACGTGCTaGAATTTCCAAGCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIRQITC*NFQAAD
Trigger: ATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
CDS-3UTR CAA 90 bp CCTGTCTCCCCTGCAACTTCAATTATGCTGTGTAAACAGTGTTACGTTCCAATAAACAATCCTTCCAGTTaGTCGTCAATGTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: PVSPATSIMLCKQCYVPINNPSS*SSMFML
Trigger: AAGCATGAACATTGACGACAAACTGGAAGGATTGTT...TATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGCACCCATTACAACCATaGTCCTGGAAGACTGCATTT +
Preference number: 5 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMHPLQP*SWKTAF
Trigger: AAATGCAGTCTTCCAGGACAATGGTTGTAATGGGTG...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATTTTTCAGGTCAGATTaGTCCAAAGCACTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTFFRSD*SKALSL
Trigger: CAAAGAGAGTGCTTTGGACAAATCTGACCTGAAAAA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTACTTGCCACAGCTGCTaGTGTTACAGAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: VTASTVVCFGKSSESMHITCHSC*CYRRLR
Trigger: TCTCAGCCTTCTGTAACACAAGCAGCTGTGGCAAGT...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGACTTGCCACAGCTGCTaGTGTTACAGAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQTCHSC*CYRRLR
Trigger: TCTCAGCCTTCTGTAACACAAGCAGCTGTGGCAAGT...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTAGGATGCTTGGGAGCTaGATCCAACATTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIRMLGS*IQHSLT
Trigger: CGTCAGAGAATGTTGGATCAAGCTCCCAAGCATCCT...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGGATGCTTGGGAGCTaGATCCAACATTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQRMLGS*IQHSLT
Trigger: CGTCAGAGAATGTTGGATCAAGCTCCCAAGCATCCT...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATATTCCTGCAACATGTaGGCTTTATCTGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTYSCNM*ALSDED
Trigger: ATCCTCATCAGATAAAGCCAACATGTTGCAGGAATA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTGGCAGAAGCATGGTTaGTCTCATCACCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIWQKHG*SHHLKR
Trigger: CCTTTTCAGGTGATGAGACAAACCATGCTTCTGCCA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACTGGCAGAAGCATGGTTaGTCTCATCACCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNWQKHG*SHHLKR
Trigger: CCTTTTCAGGTGATGAGACAAACCATGCTTCTGCCA...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGCTTCTGAGAAGTCACTaGATCCAGAAAGTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTLLRSH*IQKVLC
Trigger: ACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAG...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCAAAAGTCTGGCCAGTaGTGGCATCAGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIQKSGQ*WHQVKM
Trigger: CATCTTCACCTGATGCCACAACTGGCCAGACTTTTG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCTATCTGATCCCGAGTTaGCAGTTGAGTCCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIYLIPS*QLSPSQ
Trigger: TTGGGAAGGACTCAACTGCAAACTCGGGATCAGATA...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACACCAATTAGTTTAAATTaGTTCCATGGACCCAGACTG +
Preference number: 5 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTPISLN*FHGPRL
Trigger: CAGTCTGGGTCCATGGAACAAATTTAAACTAATTGG...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS CCA 90 bp GAAAAGGGAAATGAGTGCTGTGAATCACCAACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTTCTTAGTGGAGAATTCATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: EKGNECCESPTISPK*DLSGVVLSGEFIPD
Trigger: ATCAGGAATGAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTTGGTGATTCACAGCACTCATTTCCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCACCCATTACAACCATaGTCCTGGAAGACTGCATTT +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNHPLQP*SWKTAF
Trigger: AAATGCAGTCTTCCAGGACAATGGTTGTAATGGGTG...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGCACCCATTACAACCATaGTCCTGGAAGACTGCATTT +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEHPLQP*SWKTAF
Trigger: AAATGCAGTCTTCCAGGACAATGGTTGTAATGGGTG...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTTTTGCGGGAGAACGTaGTTTCCGCTTCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTFCGRT*FPLLLF
Trigger: AAAAAGAAGAAGCGGAAACAACGTTCTCCCGCAAAA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGGTCAGAAGGCCACCTTaGATGGCACATCTATTTAGT +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEVRRPP*MAHLFS
Trigger: ACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGAC...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGTCAGAAGGCCACCTTaGATGGCACATCTATTTAGT +
Preference number: 5 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIVRRPP*MAHLFS
Trigger: ACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGAC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGTTGTTACTTGCTGCTaGAAGATACCGCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTVVTCC*KIPLLL
Trigger: AAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAAC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGCAAATAGGCATCATTTaGGCTAGTTCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMQIGII*ASSVQS
Trigger: GCTTTGGACAGAACTAGCCAAAATGATGCCTATTTG...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGCAAATAGGCATCATTTaGGCTAGTTCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTQIGII*ASSVQS
Trigger: GCTTTGGACAGAACTAGCCAAAATGATGCCTATTTG...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCTTCTGAGAAGTCACTaGATCCAGAAAGTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIILLRSH*IQKVLC
Trigger: ACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TCCATCTTGCAGAAGAGTGGTAAGGCCATTCAATGCTTAGTGAAAGTGAGTACATCCACTGTATCAAAATaGCATCAAGTTCTCCATGAA +
Preference number: 5 (lower is better)
Translates to: SILQKSGKAIQCLVKVSTSTVSK*HQVLHE
Trigger: TTCATGGAGAACTTGATGCAATTTTGATACAGTGGA...TGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGGGTTACCTGCTTTATTaGGATACCAAGTTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTGYLLY*DTKFPS
Trigger: TGAAGGGAACTTGGTATCCAAATAAAGCAGGTAACC...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTTGGCAGAAGCATGGTTaGTCTCATCACCACATTCAT +
Preference number: 5 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIWQKHG*SHHHIH
Trigger: ATGAATGTGGTGATGAGACAAACCATGCTTCTGCCA...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468369.5
CDS TCA 90 bp TCCAACAGAGTCTGCAGTACCTCATCTGGAATAACATTTTTGTCATaGTTACTCTTAATCTCCACATTCAGTGCCTGTGACTCTAATATG +
Preference number: 5 (lower is better)
Translates to: SNRVCSTSSGITFLS*LLLISTFSACDSNM
Trigger: CATATTAGAGTCACAGGCACTGAATGTGGAGATTAAGAGTAATCATGACAAAAATGTTATTCCAGATGAGGTACTGCAGACTCTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTTTTGCGGGAGAACGTaGTTTCCGCTTCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEFCGRT*FPLLLF
Trigger: AAAAAGAAGAAGCGGAAACAACGTTCTCCCGCAAAA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCCAAATAGGCATCATTTaGGCTAGTTCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIQIGII*ASSVQS
Trigger: GCTTTGGACAGAACTAGCCAAAATGATGCCTATTTG...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTCTTCTGAGAAGTCACTaGATCCAGAAAGTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSILLRSH*IQKVLC
Trigger: ACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAG...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATTGGCAGTGCTAAATaGAGTAGCTATTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIIGSAK*SSYSSS
Trigger: AGAGCTGGAATAGCTACTCAATTTAGCACTGCCAAT...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGATTGGCAGTGCTAAATaGAGTAGCTATTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEIGSAK*SSYSSS
Trigger: AGAGCTGGAATAGCTACTCAATTTAGCACTGCCAAT...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAACTCTGGTAGGCATTaGGAATTTCACAGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTNSGRH*EFHSKR
Trigger: TCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTT...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS TCA 90 bp AGCATGGTTTGTCTCATCACCTCATCTGGAATAACATTTTTGTCATaGTTACTCTTAATCTCCACATTCAGTGCCTGTGACTCTAATATG +
Preference number: 5 (lower is better)
Translates to: SMVCLITSSGITFLS*LLLISTFSACDSNM
Trigger: CATATTAGAGTCACAGGCACTGAATGTGGAGATTAAGAGTAATCATGACAAAAATGTTATTCCAGATGAGGTGATGAGACAAACCATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496732.1
CDS CCA 90 bp AGCTTTGTGGGAATAATGATCCAACAGAGTCTGCAGTACCTCATCTaGAATAACATTTTTGTCATGATTACTCTTAATCTCCACATTCAG +
Preference number: 5 (lower is better)
Translates to: SFVGIMIQQSLQYLI*NNIFVMITLNLHIQ
Trigger: CTGAATGTGGAGATTAAGAGTAATCATGACAAAAATGTTATTCCAGATGAGGTACTGCAGACTCTGTTGGATCATTATTCCCACAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAGGAATGCTGTAGAGTaGAAAAAGAAATCATGGTTG +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTRNAVE*KKKSWL
Trigger: CAACCATGATTTCTTTTTCAACTCTACAGCATTCCT...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360647.9
ENST00000492394.5
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACAACAATCCTTCCAGTTaGTCGTCAATGTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNNNPSS*SSMFML
Trigger: AAGCATGAACATTGACGACAAACTGGAAGGATTGTT...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTTTGTCTCTCATCAGTaGCTCAGATACATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTFVSHQ*LRYISK
Trigger: TTTACTGATGTATCTGAGCAACTGATGAGAGACAAA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp ATAGAACAAGGTAACTCTGGTAGGCATTTGGAATTTCACAGTAAGAGAGTGATGTCTCTGATTTGTTTTTaGTCTCTCATCAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: IEQGNSGRHLEFHSKRVMSLICF*SLISCS
Trigger: TGAGCAACTGATGAGAGACAAAAAACAAATCAGAGA...CATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGTCTCTGATTTGTTTTTaGTCTCTCATCAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: SIKVTTCKAVQRMLTNQTSLICF*SLISCS
Trigger: TGAGCAACTGATGAGAGACAAAAAACAAATCAGAGA...CGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACTCCAAAGCACTCTCTTaGTCCATTCCAGATGATTTT +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNSKALS*SIPDDF
Trigger: AAAATCATCTGGAATGGACAAAGAGAGTGCTTTGGA...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTCCAAAGCACTCTCTTaGTCCATTCCAGATGATTTT +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTESKALS*SIPDDF
Trigger: AAAATCATCTGGAATGGACAAAGAGAGTGCTTTGGA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAGTTTTTCAGGTCAGATTaGTCCAAAGCACTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: NLLLRIALKSVQHSIYTEFFRSD*SKALSL
Trigger: CAAAGAGAGTGCTTTGGACAAATCTGACCTGAAAAA...CTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGTTGTTACTTGCTGCTaGAAGATACCGCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIVVTCC*KIPLLL
Trigger: AAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAAC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGATTGGCAGTGCTAAATaGAGTAGCTATTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQIGSAK*SSYSSS
Trigger: AGAGCTGGAATAGCTACTCAATTTAGCACTGCCAAT...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTCACACCTCACTCAGATaGATCAAAAGTTTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: VTASTVVCFGKSSESMHIHTSLR*IKSLRV
Trigger: CACCCTTAAACTTTTGATCAATCTGAGTGAGGTGTG...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp ATTGCTTCTATAAAGGTGACAACATGTAAGGCAGTTCAAAGAATGCTGACTAACAGATGGATTCCTACCTaGTTAAGTACCACATTTGCA +
Preference number: 5 (lower is better)
Translates to: IASIKVTTCKAVQRMLTNRWIPT*LSTTFA
Trigger: TGCAAATGTGGTACTTAACAAGGTAGGAATCCATCT...GTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGAAGGAAAGACCCATTTaGTATCTGATCCCGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQKERPI*YLIPSL
Trigger: CAAACTCGGGATCAGATACAAAATGGGTCTTTCCTT...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCAGGAATGCTGTAGAGTaGAAAAAGAAATCATGGTTG +
Preference number: 5 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIRNAVE*KKKSWL
Trigger: CAACCATGATTTCTTTTTCAACTCTACAGCATTCCT...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360647.9
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTAACAATCCTTCCAGTTaGTCGTCAATGTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSINNPSS*SSMFML
Trigger: AAGCATGAACATTGACGACAAACTGGAAGGATTGTT...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TGTAAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTGAAACGCATGTCACATaGACTACATTGAAATGGTTT +
Preference number: 5 (lower is better)
Translates to: CKAVQRMLTNQTKCSYWIETHVT*TTLKWF
Trigger: AAACCATTTCAATGTAGTCAATGTGACATGCGTTTC...AATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp AAGGCAGTTCAAAGAATGCTGACTAACCAAACGAAATGCAGTTATTGGATTATCGAAACGCATGTCACATaGACTACATTGAAATGGTTT +
Preference number: 5 (lower is better)
Translates to: KAVQRMLTNQTKCSYWIIETHVT*TTLKWF
Trigger: AAACCATTTCAATGTAGTCAATGTGACATGCGTTTC...GATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTTTTTCAGGTCAGATTaGTCCAAAGCACTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQFFRSD*SKALSL
Trigger: CAAAGAGAGTGCTTTGGACAAATCTGACCTGAAAAA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTATTCCTGCAACATGTaGGCTTTATCTGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQYSCNM*ALSDED
Trigger: ATCCTCATCAGATAAAGCCAACATGTTGCAGGAATA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTATTCCTGCAACATGTaGGCTTTATCTGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIYSCNM*ALSDED
Trigger: ATCCTCATCAGATAAAGCCAACATGTTGCAGGAATA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp GTGACTGCTTCAACAGTTGTGTGTTTTGGTAAAAGTTCTGAAAGTATGCATATTCACCTGAAAGTCTGCTaGCATAACTACCATTTTCAA +
Preference number: 5 (lower is better)
Translates to: VTASTVVCFGKSSESMHIHLKVC*HNYHFQ
Trigger: TTGAAAATGGTAGTTATGCAAGCAGACTTTCAGGTG...AATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360647.9
CDS-3UTR CAA 90 bp TTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTACACAGTTTGTCTCTCATCAGTaGCTCAGATACATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: LTCYYALLLNLYSTPFTQFVSHQ*LRYISK
Trigger: TTTACTGATGTATCTGAGCAACTGATGAGAGACAAA...CTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTTTGTCTCTCATCAGTaGCTCAGATACATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIFVSHQ*LRYISK
Trigger: TTTACTGATGTATCTGAGCAACTGATGAGAGACAAA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTTCTCTGATTTGTTTTTaGTCTCTCATCAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSISLICF*SLISCS
Trigger: TGAGCAACTGATGAGAGACAAAAAACAAATCAGAGA...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000492394.5
CDS-3UTR CAA 90 bp TATCAGCTTAACTTGTTATTACGCATTGCTCTTAAATCTGTACAGCACTCCATTGAAACGCATGTCACATaGACTACATTGAAATGGTTT +
Preference number: 5 (lower is better)
Translates to: YQLNLLLRIALKSVQHSIETHVT*TTLKWF
Trigger: AAACCATTTCAATGTAGTCAATGTGACATGCGTTTC...AATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000492394.5
CDS CCA 72 bp CTGCGCCAGCGGGGCAGGCCCAGAAGGCGCGGTATCTaGGAGGTCCGGCCGCCGCAGACGACCCCGCCGAGG +
Preference number: 6 (lower is better)
Translates to: LRQRGRPRRRGI*EVRPPQTTPPR
Trigger: CCTCGGCGGGGTCGTCTGCGGCGGCCGGACCTCCCAGATACCGCGCCTTCTGGGCCTGCCCCGCTGGCGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495019.5
CDS CAA 72 bp GCTGCGGAGAAGCCACTCACAAAGTTTCCCATCCCGTaGAGGGAAGGGGTCCTGACTGCGCCAGCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: AAEKPLTKFPIP*REGVLTAPAGQ
Trigger: CTGCCCCGCTGGCGCAGTCAGGACCCCTTCCCTCAACGGGATGGGAAACTTTGTGAGTGGCTTCTCCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495019.5
CDS CAA 90 bp TTGTTAGTGGCTGCGGAGAAGCCACTCACAAAGTTTCCCATCCCGTaGAGGGAAGGGGTCCTGACTGCGCCAGCGGGGCAGGCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: LLVAAEKPLTKFPIP*REGVLTAPAGQAQK
Trigger: CTTCTGGGCCTGCCCCGCTGGCGCAGTCAGGACCCCTTCCCTCAACGGGATGGGAAACTTTGTGAGTGGCTTCTCCGCAGCCACTAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495019.5
CDS GCA 72 bp GGCTTCAGAAATCCTCAATACCACCTTAATCACTTATaGCATCCGATTCCGCGGGCGGGCGCCGAGTCGCGC +
Preference number: 6 (lower is better)
Translates to: GFRNPQYHLNHL*HPIPRAGAESR
Trigger: GCGCGACTCGGCGCCCGCCCGCGGAATCGGATGGCATAAGTGATTAAGGTGGTATTGAGGATTTCTGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492394.5
CDS CAA 90 bp CCATTAAATACGTTAGGCAAACGCCCATCCCGCCAGATCACGTGCTaGAATTTCCAAGCTGCTGATTCCTCCCTCTATCCGCGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PLNTLGKRPSRQITC*NFQAADSSLYPRAG
Trigger: GCCCGCCCGCGGATAGAGGGAGGAATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGATGGGCGTTTGCCTAACGTATTTAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
CDS TCA 72 bp CTGTCTAGAATACATGCCCAGAATTACACTAGGCACTaGACACAATGTAGAGGTGTGCCGCGGGCGGGCGCC +
Preference number: 6 (lower is better)
Translates to: LSRIHAQNYTRH*TQCRGVPRAGA
Trigger: GGCGCCCGCCCGCGGCACACCTCTACATTGTGTTCAGTGCCTAGTGTAATTCTGGGCATGTATTCTAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471196.1
CDS CAA 72 bp ATAGGGAGCACGGAAGGGCTGTTCAAAGGAGCTCATTaGGTAAGCTTGGTGGACAGGCTGGGCCTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: IGSTEGLFKGAH*VSLVDRLGLSF
Trigger: AAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000496732.1
ENST00000497929.1
CDS CAA 72 bp ACGGAAGGGCTGTTCAAAGGAGCTCATTTGGTAAGCTaGGTGGACAGGCTGGGCCTCAGCTTTCTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: TEGLFKGAHLVS*VDRLGLSFLLR
Trigger: TCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000496732.1
ENST00000497929.1
CDS CAA 90 bp ATAGGGAGCACGGAAGGGCTGTTCAAAGGAGCTCATTTGGTAAGCTaGGTGGACAGGCTGGGCCTCAGCTTTCTTCTGAGAAGTCACTTG +
Preference number: 6 (lower is better)
Translates to: IGSTEGLFKGAHLVS*VDRLGLSFLLRSHL
Trigger: CAAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000496732.1
ENST00000497929.1
CDS GCA 72 bp AATACGTTAGGCAAACGCCCATCCCGCCAGATCACGTaGTTGAATTTCCAAGCTGCTGATTCCTCCCTCTAT +
Preference number: 6 (lower is better)
Translates to: NTLGKRPSRQIT*LNFQAADSSLY
Trigger: ATAGAGGGAGGAATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGATGGGCGTTTGCCTAACGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360647.9
ENST00000465763.5
ENST00000468369.5
ENST00000471196.1
ENST00000484491.5
ENST00000485866.5
ENST00000495019.5
CDS GCA 72 bp CATGGTGGCATAGACCTGCTTGTCTATGGAAGAGAATaGTGGCTGATTTGGGAGGGTCTGGTTATCAGTCAC +
Preference number: 6 (lower is better)
Translates to: HGGIDLLVYGRE*WLIWEGLVISH
Trigger: GTGACTGATAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTCTATGCCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CCA 72 bp CCACAGCTGCTTGTGTTACAGAAGGCTGAGAAGCTATaGTACCCACATTCAGCGCATATTCCCTGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: PQLLVLQKAEKL*YPHSAHIPCCC
Trigger: ACAACAGCAGGGAATATGCGCTGAATGTGGGTACCATAGCTTCTCAGCCTTCTGTAACACAAGCAGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000496732.1
ENST00000497929.1
CDS CCA 72 bp TCCTGCAACATGTTGGCTTTATCTGATGAGGATGCTTaGGAGCTTGATCCAACATTCTCTGACGGGGTGACC +
Preference number: 6 (lower is better)
Translates to: SCNMLALSDEDA*ELDPTFSDGVT
Trigger: GGTCACCCCGTCAGAGAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGATAAAGCCAACATGTTGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 90 bp TATGGATGCCGTGGTACTTTCATCAATGACACTTGCCACAGCTGCTaGTGTTACAGAAGGCTGAGAAGCTATGGTACCCACATTCAGCGC +
Preference number: 6 (lower is better)
Translates to: YGCRGTFINDTCHSC*CYRRLRSYGTHIQR
Trigger: GCGCTGAATGTGGGTACCATAGCTTCTCAGCCTTCTGTAACACAAGCAGCTGTGGCAAGTGTCATTGATGAAAGTACCACGGCATCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000496732.1
ENST00000497929.1
CDS CAA 90 bp CCATTAAATACGTTAGGCAAACGCCCATCCCGCCAGATCACGTGCTaGAATTTCCAAGCTGCTGATTCCTCCCTCTATCCTCTACAAACC +
Preference number: 6 (lower is better)
Translates to: PLNTLGKRPSRQITC*NFQAADSSLYPLQT
Trigger: GGTTTGTAGAGGATAGAGGGAGGAATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGATGGGCGTTTGCCTAACGTATTTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465763.5
CDS CAA 72 bp CGTGGTACTTTCATCAATGACACTTGCCACAGCTGCTaGTGTTACAGAAGGCTGAGAAGCTATGGTACCCAC +
Preference number: 6 (lower is better)
Translates to: RGTFINDTCHSC*CYRRLRSYGTH
Trigger: GTGGGTACCATAGCTTCTCAGCCTTCTGTAACACAAGCAGCTGTGGCAAGTGTCATTGATGAAAGTACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000496732.1
ENST00000497929.1
CDS CAA 90 bp CCATTAAATACGTTAGGCAAACGCCCATCCCGCCAGATCACGTGCTaGAATTTCCAAGCTGCTGATTCCTCCCTCTATCCTTATTCAATG +
Preference number: 6 (lower is better)
Translates to: PLNTLGKRPSRQITC*NFQAADSSLYPYSM
Trigger: CATTGAATAAGGATAGAGGGAGGAATCAGCAGCTTGGAAATTCAAGCACGTGATCTGGCGGGATGGGCGTTTGCCTAACGTATTTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471196.1
CDS CCA 72 bp GACCTGCTTGTCTATGGAAGAGAATGCTGGCTGATTTaGGAGGGTCTGGTTATCAGTCACAAAGTTAAGGCT +
Preference number: 6 (lower is better)
Translates to: DLLVYGRECWLI*EGLVISHKVKA
Trigger: AGCCTTAACTTTGTGACTGATAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CCA 72 bp GAGAAGTCACTTGATCCAGAAAGTCCTGTGTTGATGTaGCAGAAGCATGGTTTGTCTCATCACCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: EKSLDPESPVLM*QKHGLSHHLIW
Trigger: CCAGATGAGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGACTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496732.1
CDS CAA 72 bp CCAGAAAGTCCTGTGTTGATGTGGCAGAAGCATGGTTaGTCTCATCACCTGAAAAGGGAAATGAGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PESPVLMWQKHG*SHHLKREMSAV
Trigger: CACAGCACTCATTTCCCTTTTCAGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 72 bp TTACATTCACCAAGGGAAATTCTGAAAATTCAGCACTaGTCCCTGGTCCCCGAAGGTTCACCTGTCCATTGG +
Preference number: 6 (lower is better)
Translates to: LHSPREILKIQH*SLVPEGSPVHW
Trigger: CCAATGGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS TCA 72 bp ACAGGTTTACTGGGCCCCTCCTGCAAATTATCAACCTaGTCAATGTCAGCATTGCCTTCTGAGTCCAGTAAA +
Preference number: 6 (lower is better)
Translates to: TGLLGPSCKLST*SMSALPSESSK
Trigger: TTTACTGGACTCAGAAGGCAATGCTGACATTGATCAGGTTGATAATTTGCAGGAGGGGCCCAGTAAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS TCA 72 bp ATTGGCAGTGCTAAATTGAGTAGCTATTCCAGCTCTTaGTCCATGATAGGGAGCACGGAAGGGCTGTTCAAA +
Preference number: 6 (lower is better)
Translates to: IGSAKLSSYSSS*SMIGSTEGLFK
Trigger: TTTGAACAGCCCTTCCGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000468369.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS TCA 72 bp CTTCTGAGAAGTCACTTGATCCAGAAAGTCCTGTGTTaGTGTGGCAGAAGCATGGTTTGTCTCATCACCTCA +
Preference number: 6 (lower is better)
Translates to: LLRSHLIQKVLC*CGRSMVCLITS
Trigger: TGAGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496732.1
CDS CCA 72 bp GAGAAGTCACTTGATCCAGAAAGTCCTGTGTTGATGTaGCAGAAGCATGGTTTGTCTCATCACCTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: EKSLDPESPVLM*QKHGLSHHLKR
Trigger: CCTTTTCAGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 90 bp AAGCTATGGTACCCACATTCAGCGCATATTCCCTGCTGTTGTTACTaGCTGCTTGAAGATACCGCTTCTTCTTCAAAAACTGCATGGCAT +
Preference number: 6 (lower is better)
Translates to: KLWYPHSAHIPCCCY*LLEDTASSSKTAWH
Trigger: ATGCCATGCAGTTTTTGAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGAATGTGGGTACCATAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 90 bp TCACTTGATCCAGAAAGTCCTGTGTTGATGTGGCAGAAGCATGGTTaGTCTCATCACCTGAAAAGGGAAATGAGTGCTGTGAATCACCAA +
Preference number: 6 (lower is better)
Translates to: SLDPESPVLMWQKHG*SHHLKREMSAVNHQ
Trigger: TTGGTGATTCACAGCACTCATTTCCCTTTTCAGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS TCA 72 bp ATGCTTGGGAGCTTGATCCAACATTCTCTGACGGGGTaGCCTCTGGTACTTCTGAAGAATTTATTGATATGC +
Preference number: 6 (lower is better)
Translates to: MLGSLIQHSLTG*PLVLLKNLLIC
Trigger: GCATATCAATAAATTCTTCAGAAGTACCAGAGGTCACCCCGTCAGAGAATGTTGGATCAAGCTCCCAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS GCA 72 bp GACACTCCACCCATTACAACCATTGTCCTGGAAGACTaGATTTCGTCTATGCCGCCACATTTAAGAAACAAT +
Preference number: 6 (lower is better)
Translates to: DTPPITTIVLED*ISSMPPHLRNN
Trigger: ATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCAGGACAATGGTTGTAATGGGTGGAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360647.9
ENST00000465763.5
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000495019.5
CDS GCA 72 bp ACCCACATTCAGCGCATATTCCCTGCTGTTGTTACTTaGTGCTTGAAGATACCGCTTCTTCTTCAAAAACTG +
Preference number: 6 (lower is better)
Translates to: THIQRIFPAVVT*CLKIPLLLQKL
Trigger: CAGTTTTTGAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGAATGTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 90 bp ATCAGTCACAAAGTTAAGGCTCGGGCTATTCAAATAGGCATCATTTaGGCTAGTTCTGTCCAAAGCCTGCTGCAGAAACTTGGAGTATTC +
Preference number: 6 (lower is better)
Translates to: ISHKVKARAIQIGII*ASSVQSLLQKLGVF
Trigger: GAATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAACTAGCCAAAATGATGCCTATTTGAATAGCCCGAGCCTTAACTTTGTGACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 72 bp TTTTGGCTAGTTCTGTCCAAAGCCTGCTGCAGAAACTaGGAGTATTCCTGCAACATGTTGGCTTTATCTGAT +
Preference number: 6 (lower is better)
Translates to: FWLVLSKACCRN*EYSCNMLALSD
Trigger: ATCAGATAAAGCCAACATGTTGCAGGAATACTCCAAGTTTCTGCAGCAGGCTTTGGACAGAACTAGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 72 bp AAAGTTAAGGCTCGGGCTATTCAAATAGGCATCATTTaGGCTAGTTCTGTCCAAAGCCTGCTGCAGAAACTT +
Preference number: 6 (lower is better)
Translates to: KVKARAIQIGII*ASSVQSLLQKL
Trigger: AAGTTTCTGCAGCAGGCTTTGGACAGAACTAGCCAAAATGATGCCTATTTGAATAGCCCGAGCCTTAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 90 bp TGCATTTCGTCTATGCCGCCACATTTAAGAAACAATCCTTCCAGTTaGTCGTCAATGTTCATGCTTAAGTATAACTGCCCGAGACTAAGG +
Preference number: 6 (lower is better)
Translates to: CISSMPPHLRNNPSS*SSMFMLKYNCPRLR
Trigger: CCTTAGTCTCGGGCAGTTATACTTAAGCATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000465763.5
ENST00000471196.1
ENST00000492394.5
ENST00000495019.5
CDS CAA 72 bp TCTATGCCGCCACATTTAAGAAACAATCCTTCCAGTTaGTCGTCAATGTTCATGCTTAAGTATAACTGCCCG +
Preference number: 6 (lower is better)
Translates to: SMPPHLRNNPSS*SSMFMLKYNCP
Trigger: CGGGCAGTTATACTTAAGCATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000465763.5
ENST00000471196.1
ENST00000492394.5
ENST00000495019.5
CDS CAA 72 bp CACCAACTATTAGTCCAAAGTGGGACTTATCTGGAGTaGTTCTTAGTGGAGAATTCATTCCTGATCGAAAGC +
Preference number: 6 (lower is better)
Translates to: HQLLVQSGTYLE*FLVENSFLIES
Trigger: GCTTTCGATCAGGAATGAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS GCA 72 bp GGCTTCAGAAATCCTCAATACCACCTTAATCACTTATaGCATCCGATTCCTCCATTAAATACGTTAGGCAAA +
Preference number: 6 (lower is better)
Translates to: GFRNPQYHLNHL*HPIPPLNTLGK
Trigger: TTTGCCTAACGTATTTAATGGAGGAATCGGATGGCATAAGTGATTAAGGTGGTATTGAGGATTTCTGAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360647.9
ENST00000465763.5
ENST00000468369.5
ENST00000471196.1
ENST00000484491.5
ENST00000485866.5
ENST00000495019.5
CDS CCA 72 bp AATGAGTGCTGTGAATCACCAACTATTAGTCCAAAGTaGGACTTATCTGGAGTTGTTCTTAGTGGAGAATTC +
Preference number: 6 (lower is better)
Translates to: NECCESPTISPK*DLSGVVLSGEF
Trigger: GAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTTGGTGATTCACAGCACTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 72 bp TCTATGCCGCCACATTTAAGAAACAATCCTTCCAGTTaGTCGTCAATGTTCATGCTTAAGTATAACTGCCTG +
Preference number: 6 (lower is better)
Translates to: SMPPHLRNNPSS*SSMFMLKYNCL
Trigger: CAGGCAGTTATACTTAAGCATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485866.5
CDS TCA 72 bp TTTCACTGTCTCCTCATGGACCATGAGTTCATCATGTaGTATCATATCCTGTTGTCTCATTTCACTTTCTTG +
Preference number: 6 (lower is better)
Translates to: FHCLLMDHEFIM*YHILLSHFTFL
Trigger: CAAGAAAGTGAAATGAGACAACAGGATATGATATCACATGATGAACTCATGGTCCATGAGGAGACAGTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
CDS CAA 72 bp TCTATGCCGCCACATTTAAGAAACAATCCTTCCAGTTaGTCGTCAATGTTCATGCTTAAGTATAACTGCCTT +
Preference number: 6 (lower is better)
Translates to: SMPPHLRNNPSS*SSMFMLKYNCL
Trigger: AAGGCAGTTATACTTAAGCATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484491.5
CDS TCA 72 bp TTGCTCTCTTCATATGTGGATAAAGGTGAAATTGTTTaGTTTTGCTCCAGTGGCTGTTTCAGACTTCTCTTA +
Preference number: 6 (lower is better)
Translates to: LLSSYVDKGEIV*FCSSGCFRLLL
Trigger: TAAGAGAAGTCTGAAACAGCCACTGGAGCAAAATCAAACAATTTCACCTTTATCCACATATGAAGAGAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 90 bp CTGAGTCCAGTAAAGCCTGTTTATCCACAAGTTCAAAAGCATACTTaGAAACTTTGCTCTCTTCATATGTGGATAAAGGTGAAATTGTTT +
Preference number: 6 (lower is better)
Translates to: LSPVKPVYPQVQKHT*KLCSLHMWIKVKLF
Trigger: AAACAATTTCACCTTTATCCACATATGAAGAGAGCAAAGTTTCAAAGTATGCTTTTGAACTTGTGGATAAACAGGCTTTACTGGACTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 72 bp GTAAAGCCTGTTTATCCACAAGTTCAAAAGCATACTTaGAAACTTTGCTCTCTTCATATGTGGATAAAGGTG +
Preference number: 6 (lower is better)
Translates to: VKPVYPQVQKHT*KLCSLHMWIKV
Trigger: CACCTTTATCCACATATGAAGAGAGCAAAGTTTCAAAGTATGCTTTTGAACTTGTGGATAAACAGGCTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1
CDS CAA 72 bp TTTTTCTGTAAGTCTACTGGCTCTCTGATTTGTTTTTaGTCTCTCATCAGTTGCTCAGATACATCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: FFCKSTGSLICF*SLISCSDTSVK
Trigger: TTTTACTGATGTATCTGAGCAACTGATGAGAGACAAAAAACAAATCAGAGAGCCAGTAGACTTACAGAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360647.9
ENST00000484491.5
ENST00000485866.5
ENST00000492394.5
ENST00000497929.1