RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF142 (Homo sapiens)

Ensembl gene IDs: ENSG00000115568

Ensembl transcript IDs: ENST00000411696.7, ENST00000433921.5, ENST00000440934.2, ENST00000449707.5, ENST00000450560.1, ENST00000450765.5

Found 1803 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCATaGTGGCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACA +
Preference number: 1 (lower is better)
Translates to: QRRQKKGWRSVWVRA*WRRPAAQRKARWHT
Trigger: TGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGCCATCATGCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp CGGCTAGGGAAGGCCTCCTGGCAGGCCCCACACTCAAGCCGTGGGTaGTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGGCTGGGGCAC +
Preference number: 1 (lower is better)
Translates to: RLGKASWQAPHSSRG*CLRVCPRKLAGLGH
Trigger: GTGCCCCAGCCCTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGGCCTGCCAGGAGGCCTTCCCTAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GGGCACAGCAGGGGCTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTaGAGATTCAGGGCCTTCTCCCGGCGAGTGATAAAAGGGCAGTGT +
Preference number: 1 (lower is better)
Translates to: GHSRGSRRPWHPVLE*RFRAFSRRVIKGQC
Trigger: ACACTGCCCTTTTATCACTCGCCGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCCCTGCTGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp CCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGGTCTTTaGCCACACCCTGGTTTGGGTCGGCTTGGTCAGGGTGGTGCCTGC +
Preference number: 1 (lower is better)
Translates to: PAAHHAGALWGWWGL*PHPGLGRLGQGGAC
Trigger: GCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GCTGGTTTGAGGGCTCTGAATCTGGTGGGGGTGTTGGGCCCTGCATaGCCCCTTCTGGCTCCTGGCTTGCATAGCGGAGCTGCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: AGLRALNLVGVLGPA*PLLAPGLHSGAARP
Trigger: AGGCCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAAGGGGCCATGCAGGGCCCAACACCCCCACCAGATTCAGAGCCCTCAAACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CAGGTGCACTGTGGGGGTGGTGGGGTCTTTGCCCACACCCTGGTTTaGGTCGGCTTGGTCAGGGTGGTGCCTGCGTACGTGCTTGACCAC +
Preference number: 1 (lower is better)
Translates to: QVHCGGGGVFAHTLV*VGLVRVVPAYVLDH
Trigger: GTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp TGGGCCTCCATGGCTTCGGCTGTGGCAAAGAGCATGGGACATGAGTaGTGGCGGCACTCCACAGCCCGCACCCCATGGGTCTCCTTCAGG +
Preference number: 1 (lower is better)
Translates to: WASMASAVAKSMGHE*WRHSTARTPWVSFR
Trigger: CCTGAAGGAGACCCATGGGGTGCGGGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGGAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp GTGGTGGGCCTCCATGGCTTCGGCTGTGGCAAAGAGCATGGGACATaGGTGATGGCGGCACTCCACAGCCCGCACCCCATGGGTCTCCTT +
Preference number: 1 (lower is better)
Translates to: VVGLHGFGCGKEHGT*VMAALHSPHPMGLL
Trigger: AAGGAGACCCATGGGGTGCGGGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGGAGGCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GACTCTTGTGGTGGGCCTCCATGGCTTCGGCTGTGGCAAAGAGCATaGGACATGAGTGATGGCGGCACTCCACAGCCCGCACCCCATGGG +
Preference number: 1 (lower is better)
Translates to: DSCGGPPWLRLWQRA*DMSDGGTPQPAPHG
Trigger: CCCATGGGGTGCGGGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGGAGGCCCACCACAAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp TCATGCAGGTGCACTGTGGGGGTGGTGGGGTCTTTGCCCACACCCTaGTTTGGGTCGGCTTGGTCAGGGTGGTGCCTGCGTACGTGCTTG +
Preference number: 1 (lower is better)
Translates to: SCRCTVGVVGSLPTP*FGSAWSGWCLRTCL
Trigger: CAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTaGTGGGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTTGGTCAG +
Preference number: 1 (lower is better)
Translates to: GWDPPAAHHAGALWG*WGLCPHPGLGRLGQ
Trigger: CTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp TGCTTTACCAGGCCCACCCGCTCCCGGGCAGCAAAGTCACAGAGCTaGCAGCGGTGGCTGAAATGCTGCTGCCTCCGGTGCTCATCCAGA +
Preference number: 1 (lower is better)
Translates to: CFTRPTRSRAAKSQS*QRWLKCCCLRCSSR
Trigger: TCTGGATGAGCACCGGAGGCAGCAGCATTTCAGCCACCGCTGTCAGCTCTGTGACTTTGCTGCCCGGGAGCGGGTGGGCCTGGTAAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp AGGGGTAATGGCTCTGCTGCGGCTGCTGCCGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTGAGGCGGAATTCCTCACGGCAGACA +
Preference number: 1 (lower is better)
Translates to: RGNGSAAAAAVWLLR*SFRAWLRRNSSRQT
Trigger: TGTCTGCCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCATTACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp AGTGGGGCCGGTGTGCCAGGGTGGTGCTGGGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTGCAGGCGAAGGCACACACCTCACAC +
Preference number: 1 (lower is better)
Translates to: SGAGVPGWCWEAMCF*SSYFRLQAKAHTSH
Trigger: GTGTGAGGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTCCCAGCACCACCCTGGCACACCGGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp TGGTACCAAACGTCTGGGGGCAAGAGCTGCAGGGGATGCGGCCAATaGCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGG +
Preference number: 1 (lower is better)
Translates to: WYQTSGGKSCRGCGQ*LCVGTGEPLTGTVW
Trigger: CCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GATGGCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTaGACACATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGC +
Preference number: 1 (lower is better)
Translates to: DGAGQQPSGKHGGTH*THRVWPHCACEGGC
Trigger: GCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GTGGCGGTTGAGTGCATTCCTCTCCACCGCACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTCACCCAGCTCCCGCAGCAGATGGGT +
Preference number: 1 (lower is better)
Translates to: VAVECIPLHRTVVAQ*AVVGLFTQLPQQMG
Trigger: ACCCATCTGCTGCGGGAGCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCACTACAGTGCGGTGGAGAGGAATGCACTCAACCGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CTGCTTGTGGCGGCTCTGGTAACTGCAGTAGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTGGTGCTGGGAAGCCATGTGCTTCTG +
Preference number: 1 (lower is better)
Translates to: LLVAALVTAVVARVE*GRCARVVLGSHVLL
Trigger: CAGAAGCACATGGCTTCCCAGCACCACCCTGGCACACCGGCCCCACTCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCCACAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGTTTaGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCG +
Preference number: 1 (lower is better)
Translates to: QPSGKHGGTHCTHRV*PHCACEGGCAAGSA
Trigger: CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GTGGGGGTGGTGGGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTTaGTCAGGGTGGTGCCTGCGTACGTGCTTGACCACCTGGAACTTT +
Preference number: 1 (lower is better)
Translates to: VGVVGSLPTPWFGSA*SGWCLRTCLTTWNF
Trigger: AAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp TGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTaGGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTTGGTCAGGGT +
Preference number: 1 (lower is better)
Translates to: WDPPAAHHAGALWGW*GLCPHPGLGRLGQG
Trigger: ACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp AGGCTCGGGGTGTCGGCGCAGAGCATGCTGCTTAAGTGCTGTCTCTaGGCTGAACTGGGCTTCACACTGGGAGCAGGCAAAGGCTGGGGT +
Preference number: 1 (lower is better)
Translates to: RLGVSAQSMLLKCCL*AELGFTLGAGKGWG
Trigger: ACCCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTTCAGCTCAGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACACCCCGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp AGTTCTCATGGCTCAGCACAGCCTGCTTGTGGCGGCTCTGGTAACTaGAGTAGTGGCAAGGGTAGAGTGGGGCCGGTGTGCCAGGGTGGT +
Preference number: 1 (lower is better)
Translates to: SSHGSAQPACGGSGN*SSGKGRVGPVCQGG
Trigger: ACCACCCTGGCACACCGGCCCCACTCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCCACAAGCAGGCTGTGCTGAGCCATGAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp TGTGGGCAGCGGAAGGCTCGCCCCTCTCCCTGGATCACTACCATCTaGACCCGCCCCTCTAGCACCAATGCCTCTGCTTGTTCTTTGTCC +
Preference number: 1 (lower is better)
Translates to: CGQRKARPSPWITTI*TRPSSTNASACSLS
Trigger: GGACAAAGAACAAGCAGAGGCATTGGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTTCCGCTGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GCAAGCGCAGTTTCGAGTTGGTACCAAACGTCTGGGGGCAAGAGCTaGAGGGGATGCGGCCAATGCCTGTGTGTCGGGACTGGTGAGCCT +
Preference number: 1 (lower is better)
Translates to: ASAVSSWYQTSGGKS*RGCGQCLCVGTGEP
Trigger: AGGCTCACCAGTCCCGACACACAGGCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTaGATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTA +
Preference number: 1 (lower is better)
Translates to: ESPCFSMPGLLVHTQ*ISPVGAVLTLGTLV
Trigger: TACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp AAGGCCTTGCCACACTGCTCACACATGAAAGCCCGTGCTTCTCGATaGCGGGTCTCCTGGTGCACACGCAGTGCATCAGCCCGGTTGGTG +
Preference number: 1 (lower is better)
Translates to: KALPHCSHMKARASR*RVSWCTRSASARLV
Trigger: CACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTGGCAAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GTGCAGATTCAGGGCCTTCTCCCGGCGAGTGATAAAAGGGCAGTGTaGGCAGCGGAAGGCTCGCCCCTCTCCCTGGATCACTACCATCTG +
Preference number: 1 (lower is better)
Translates to: VQIQGLLPASDKRAV*AAEGSPLSLDHYHL
Trigger: CAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTTCCGCTGCCCACACTGCCCTTTTATCACTCGCCGGGAGAAGGCCCTGAATCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CTCGATGCCGGGTCTCCTGGTGCACACGCAGTGCATCAGCCCGGTTaGTGCAGTACTCACACTCGGGACACTGGTATGGCTTCAGTCCTG +
Preference number: 1 (lower is better)
Translates to: LDAGSPGAHAVHQPG*CSTHTRDTGMASVL
Trigger: CAGGACTGAAGCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GTGGGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTTGGTCAGGGTaGTGCCTGCGTACGTGCTTGACCACCTGGAACTTTTGCTTGGCC +
Preference number: 1 (lower is better)
Translates to: VGSLPTPWFGSAWSG*CLRTCLTTWNFCLA
Trigger: GGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTaGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCAGG +
Preference number: 1 (lower is better)
Translates to: PSLHISDHTLFLYRR*GRLSALRSSVGSGR
Trigger: CCTGCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp CCTGGTTTGGGTCGGCTTGGTCAGGGTGGTGCCTGCGTACGTGCTTaGCCACCTGGAACTTTTGCTTGGCCTTGTAGTTGCAGAGGCGGC +
Preference number: 1 (lower is better)
Translates to: PGLGRLGQGGACVRA*PPGTFAWPCSCRGG
Trigger: GCCGCCTCTGCAACTACAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GGCTCTGGTAACTGCAGTAGTGGCAAGGGTAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAGCCATGTGCTTCTGCAGCTCATACT +
Preference number: 1 (lower is better)
Translates to: GSGNCSSGKGRVGPV*QGGAGKPCASAAHT
Trigger: AGTATGAGCTGCAGAAGCACATGGCTTCCCAGCACCACCCTGGCACACCGGCCCCACTCTACCCTTGCCACTACTGCAGTTACCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GGTAGTCACAGAGGGCACAGTGGAACTCACGGAGGCGGGTATGCTTaGAGTTCTCATGGCTCAGCACAGCCTGCTTGTGGCGGCTCTGGT +
Preference number: 1 (lower is better)
Translates to: GSHRGHSGTHGGGYA*SSHGSAQPACGGSG
Trigger: ACCAGAGCCGCCACAAGCAGGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCCTCTGTGACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp TGCTCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTaGACACGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCG +
Preference number: 1 (lower is better)
Translates to: CSHMKARASRCRVSW*TRSASARLVQYSHS
Trigger: CGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTTGGTCAGGGTGGTaGCTGCGTACGTGCTTGACCACCTGGAACTTTTGCTTGGCCTTG +
Preference number: 1 (lower is better)
Translates to: GSLPTPWFGSAWSGW*LRTCLTTWNFCLAL
Trigger: CAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CACTGCTCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTaGTGCACACGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACAC +
Preference number: 1 (lower is better)
Translates to: HCSHMKARASRCRVS*CTRSASARLVQYSH
Trigger: GTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp CAAGAGCTGCAGGGGATGCGGCCAATGCCTGTGTGTCGGGACTGGTaGGCCTCTAACCGGTACCGTCTGGTGGTCGAAAAGTCACAGAAG +
Preference number: 1 (lower is better)
Translates to: QELQGMRPMPVCRDW*ASNRYRLVVEKSQK
Trigger: CTTCTGTGACTTTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCATTGGCCGCATCCCCTGCAGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp ACACCTCACACATCAGAGACTTGCCCTGATGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGC +
Preference number: 1 (lower is better)
Translates to: TPHTSETCPDAAACG*SADQPGDSDRSTGC
Trigger: GCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGATGTGTGAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp GATGCCGGGTCTCCTGGTGCACACGCAGTGCATCAGCCCGGTTGGTaGAGTACTCACACTCGGGACACTGGTATGGCTTCAGTCCTGTAT +
Preference number: 1 (lower is better)
Translates to: DAGSPGAHAVHQPGW*STHTRDTGMASVLY
Trigger: ATACAGGACTGAAGCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp TGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTaGGTACCTGGGAGCACAGGTTGCAGAGGGATGGGTGAATCTGGT +
Preference number: 1 (lower is better)
Translates to: CDAGGGFPLSVSSEA*VPGSTGCRGMGESG
Trigger: ACCAGATTCACCCATCCCTCTGCAACCTGTGCTCCCAGGTACCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GCATGCTGCTTAAGTGCTGTCTCTGAGCTGAACTGGGCTTCACACTaGGAGCAGGCAAAGGCTGGGGTGCCTTGGTGGCAGCTGTTGACA +
Preference number: 1 (lower is better)
Translates to: ACCLSAVSELNWASH*EQAKAGVPWWQLLT
Trigger: TGTCAACAGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTTCAGCTCAGAGACAGCACTTAAGCAGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp CTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCA +
Preference number: 1 (lower is better)
Translates to: LSLGSELLRLALVPV*TSQTIPSSYTGGGA
Trigger: TGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
3UTR GCA 90 bp CTAATGCTGTCCTCCTGCCCCTTCCAGGTTACCGCCACATTCACCTaGTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTG +
Preference number: 1 (lower is better)
Translates to: LMLSSCPFQVTATFT*CPKMASASAQLPSL
Trigger: CAAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTGGCGGTAACCTGGAAGGGGCAGGAGGACAGCATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp GGTGGTGCTGGGAAGCCATGTGCTTCTGCAGCTCATACTTCCGCTTaGAGGCGAAGGCACACACCTCACACATCAGAGACTTGCCCTGAT +
Preference number: 1 (lower is better)
Translates to: GGAGKPCASAAHTSA*RRRHTPHTSETCPD
Trigger: ATCAGGGCAAGTCTCTGATGTGTGAGGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTCCCAGCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GTCCCTTCTCTTGTCCCGGCAGGTGAGGCAGGAGGGAGAATACAGTaGGGAGGCAGTGGGCAGAGGTTTAGGTTGGATGGCCATTATCTT +
Preference number: 1 (lower is better)
Translates to: VPSLVPAGEAGGRIQ*GGSGQRFRLDGHYL
Trigger: AAGATAATGGCCATCCAACCTAAACCTCTGCCCACTGCCTCCCCACTGTATTCTCCCTCCTGCCTCACCTGCCGGGACAAGAGAAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp TTCCATCTTTGTGTATATCTGCATCCAGGAAGGCCTGGAGGGGGATaGGTCCTGAGGTGGGCATTTCACGGGAAGGGTTGGTGTGCTGGC +
Preference number: 1 (lower is better)
Translates to: FHLCVYLHPGRPGGG*VLRWAFHGKGWCAG
Trigger: GCCAGCACACCAACCCTTCCCGTGAAATGCCCACCTCAGGACTCATCCCCCTCCAGGCCTTCCTGGATGCAGATATACACAAAGATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp TGGAGGCTGGGGTCTGGGAAGTGGAGATGCAGGTGCTCCACCAGATaGGTCCGCTTCTTAAAGCAGCGCTTACACTCTGGACACATATGG +
Preference number: 1 (lower is better)
Translates to: WRLGSGKWRCRCSTR*VRFLKQRLHSGHIW
Trigger: CCATATGTGTCCAGAGTGTAAGCGCTGCTTTAAGAAGCGGACTCATCTGGTGGAGCACCTGCATCTCCACTTCCCAGACCCCAGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp CATAGCCATGGGCCTTGCGTTTATGGAACAAGAGTGTGGTGTTGCTaGAGGTGCGGTAGTCACAGAGGGCACAGTGGAACTCACGGAGGC +
Preference number: 1 (lower is better)
Translates to: HSHGPCVYGTRVWCC*RCGSHRGHSGTHGG
Trigger: GCCTCCGTGAGTTCCACTGTGCCCTCTGTGACTACCGCACCTTCAGCAACACCACACTCTTGTTCCATAAACGCAAGGCCCATGGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp CATGCAGACCGCCTTTATTCCCATTCCCACCCCCAGGTTGTGACGTaGCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: HADRLYSHSHPQVVT*PLFCPSICCQIVAQ
Trigger: CTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGAATGGGAATAAAGGCGGTCTGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 90 bp GACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTaGACCTGCATGCAACAAGGTGAGCCAGCCCCTTTGGCCCCTGGC +
Preference number: 1 (lower is better)
Translates to: DWKSRNDFIGQYTLP*TCMQQGEPAPLAPG
Trigger: GCCAGGGGCCAAAGGGGCTGGCTCACCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 90 bp TTGAGCTTGCTCTTACTGGTGAAGAACTTCTGGCAGTTAGGGCACTaGAGGCTGGGGTCTGGGAAGTGGAGATGCAGGTGCTCCACCAGA +
Preference number: 1 (lower is better)
Translates to: LSLLLLVKNFWQLGH*RLGSGKWRCRCSTR
Trigger: TCTGGTGGAGCACCTGCATCTCCACTTCCCAGACCCCAGCCTCCAGTGCCCTAACTGCCAGAAGTTCTTCACCAGTAAGAGCAAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CACAGTGGGCAGTGGTGGGCCTTTTCACCCAGCTCCCGCAGCAGATaGGTCTTGAGCTTGCTCTTACTGGTGAAGAACTTCTGGCAGTTA +
Preference number: 1 (lower is better)
Translates to: HSGQWWAFSPSSRSR*VLSLLLLVKNFWQL
Trigger: TAACTGCCAGAAGTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCTGGGTGAAAAGGCCCACCACTGCCCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp TTTGTGTATATCTGCATCCAGGAAGGCCTGGAGGGGGATGAGTCCTaGGGTGGGCATTTCACGGGAAGGGTTGGTGTGCTGGCTTTAGAC +
Preference number: 1 (lower is better)
Translates to: FVYICIQEGLEGDES*GGHFTGRVGVLALD
Trigger: GTCTAAAGCCAGCACACCAACCCTTCCCGTGAAATGCCCACCTCAGGACTCATCCCCCTCCAGGCCTTCCTGGATGCAGATATACACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp TCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGCTaGAGCCAGACTTCCTGCGTGATATCCAGAGTTCTTTCCACCCTG +
Preference number: 1 (lower is better)
Translates to: SVMGISARMAAVAMC*SQTSCVISRVLSTL
Trigger: CAGGGTGGAAAGAACTCTGGATATCACGCAGGAAGTCTGGCTTCAGCACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp GTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTaGGTCCCTTCTCTTGTCCCGGCAGGTGAGGCAGGAGGGAGAATA +
Preference number: 1 (lower is better)
Translates to: VYLLSDCGPGSYFQA*VPSLVPAGEAGGRI
Trigger: TATTCTCCCTCCTGCCTCACCTGCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp GAAGTTGGAAATATCTTCATGCATGCTGGCCATGTGGCGGTTGAGTaGATTCCTCTCCACCGCACTGTAGTGGCACAGTGGGCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: EVGNIFMHAGHVAVE*IPLHRTVVAQWAVV
Trigger: CACCACTGCCCACTGTGCCACTACAGTGCGGTGGAGAGGAATGCACTCAACCGCCACATGGCCAGCATGCATGAAGATATTTCCAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GTGCTCCACCAGATGAGTCCGCTTCTTAAAGCAGCGCTTACACTCTaGACACATATGGGTCTTGAAGAGGGACTCGGTGCCAGAGACCAC +
Preference number: 1 (lower is better)
Translates to: VLHQMSPLLKAALTL*THMGLEEGLGARDH
Trigger: GTGGTCTCTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGCTTTAAGAAGCGGACTCATCTGGTGGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp GTGGCAAAGGGGCAGAAGGTGCAGCGCAGCTCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTACGGAATAGGTGCTTATTGGAACAA +
Preference number: 1 (lower is better)
Translates to: VAKGQKVQRSSSLPG*PCFLCLRNRCLLEQ
Trigger: TTGTTCCAATAAGCACCTATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTTTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp CAGTACATGCAGACCGCCTTTATTCCCATTCCCACCCCCAGGTTGTaGCGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGG +
Preference number: 1 (lower is better)
Translates to: QYMQTAFIPIPTPRL*RARCFVRLSVVRLW
Trigger: CCACAATCTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGAATGGGAATAAAGGCGGTCTGCATGTACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp AAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTaGATGCAACAAGGTGAGCCAGCCCCTTTGGCCCCTGGCCAATAC +
Preference number: 1 (lower is better)
Translates to: KSRNDFIGQYTLPWT*MQQGEPAPLAPGQY
Trigger: GTATTGGCCAGGGGCCAAAGGGGCTGGCTCACCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp GGTTCTTGGTGCTGTAAGCACAATCGGTGCACTTGTAGAGACGAGTaGCCCCATGCCCTTTCACATGGTGATCTAGTACCAGCTGATGGC +
Preference number: 1 (lower is better)
Translates to: GSWCCKHNRCTCRDE*PHALSHGDLVPADG
Trigger: GCCATCAGCTGGTACTAGATCACCATGTGAAAGGGCATGGGGGCACTCGTCTCTACAAGTGCACCGATTGTGCTTACAGCACCAAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGGGCAGAAGGTGCAGCGCAGCTCTTC +
Preference number: 1 (lower is better)
Translates to: LFMSMHLAYMILVSH*VEGGKGAEGAAQLF
Trigger: GAAGAGCTGCGCTGCACCTTCTGCCCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp TTCAGCCACGTGAGAGGTAATAGAGGAGAGCCGGGAACAAAGGAATaGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCAAAGCGGTGCTT +
Preference number: 1 (lower is better)
Translates to: FSHVRGNRGEPGTKE*AGVAVKLALLKAVL
Trigger: AAGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCCTCTATTACCTCTCACGTGGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp AGTAGAAGTTGGAAATATCTTCATGCATGCTGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCGCACTGTAGTGGCACAGTGGGCAGT +
Preference number: 1 (lower is better)
Translates to: SRSWKYLHACWPCGG*VHSSPPHCSGTVGS
Trigger: ACTGCCCACTGTGCCACTACAGTGCGGTGGAGAGGAATGCACTCAACCGCCACATGGCCAGCATGCATGAAGATATTTCCAACTTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp GCACCAATGCCTCTGCTTGTTCTTTGTCCTGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAGGTAATGGGGGCAAGGGTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: APMPLLVLCPVSLGP*VMTLTQVMGARVLS
Trigger: AGACAGCACCCTTGCCCCCATTACCTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp AAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTaGACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCC +
Preference number: 1 (lower is better)
Translates to: KRLDPRTVLRLLREH*TALKVPHWTASSLA
Trigger: GGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp AAGGGGCAGAAGGTGCAGCGCAGCTCTTCACTGCCAGGGTGGCCCTaGTTCTTGTGTTTACGGAATAGGTGCTTATTGGAACAAGCAAAA +
Preference number: 1 (lower is better)
Translates to: KGQKVQRSSSLPGWP*FLCLRNRCLLEQAK
Trigger: TTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp AGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTaGAAGCGCAGTTTCGAGTTGGTACCAAACGTCTGGGGGCAAGAG +
Preference number: 1 (lower is better)
Translates to: SGQKWVGVLSCTLNR*KRSFELVPNVWGQE
Trigger: CTCTTGCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp CAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTaGCGTTCGTCTAGACACAGCACGGCAGGAGACCAACTATGTGGA +
Preference number: 1 (lower is better)
Translates to: QRGVHCGSTGESADL*RSSRHSTAGDQLCG
Trigger: TCCACATAGTTGGTCTCCTGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 90 bp CAGGAGGGAGAATACAGTGGGGAGGCAGTGGGCAGAGGTTTAGGTTaGATGGCCATTATCTTCTTCTCTCTCAGACTGCTGAGGGTTCAA +
Preference number: 1 (lower is better)
Translates to: QEGEYSGEAVGRGLG*MAIIFFSLRLLRVQ
Trigger: TTGAACCCTCAGCAGTCTGAGAGAGAAGAAGATAATGGCCATCCAACCTAAACCTCTGCCCACTGCCTCCCCACTGTATTCTCCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp ATGGTGAATCTTGCTCTTCTTTTCTCCTGGGGCCCTCAGTGGCCATaGATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGC +
Preference number: 1 (lower is better)
Translates to: MVNLALLFSWGPQWP*ICRLQGLKWTSVMG
Trigger: GCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAGAAAAGAAGAGCAAGATTCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp TTACCAGCAGGTACCGTGCACCCAGTACCTATCTTCTTAACTCCCTaGAAGAGGGGCTGGAAGGCCTCCATGGTGAATCTTGCTCTTCTT +
Preference number: 1 (lower is better)
Translates to: LPAGTVHPVPIFLTP*KRGWKASMVNLALL
Trigger: AAGAAGAGCAAGATTCACCATGGAGGCCTTCCAGCCCCTCTTTCAGGGAGTTAAGAAGATAGGTACTGGGTGCACGGTACCTGCTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp ATGGCTTCAGTCCTGTATGCTTGGTCATGTGGTATTTCAGCTGGTTaGCCCACTTGCACTTGTAGCCACACTCAGGGCACAGGTACTTCC +
Preference number: 1 (lower is better)
Translates to: MASVLYAWSCGISAG*PTCTCSHTQGTGTS
Trigger: GGAAGTACCTGTGCCCTGAGTGTGGCTACAAGTGCAAGTGGGTCAACCAGCTGAAATACCACATGACCAAGCATACAGGACTGAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 90 bp ATTATGACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTaGCTTGGACCTGCATGCAACAAGGTGAGCCAGCCCCTTTGGCCC +
Preference number: 1 (lower is better)
Translates to: IMTGNPEMTLLVSTP*LGPACNKVSQPLWP
Trigger: GGGCCAAAGGGGCTGGCTCACCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGTCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 90 bp TTCTCACCCGTATGTAGAAGCATGTGTCGGATGAGCACCCTCTTGTaGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCA +
Preference number: 1 (lower is better)
Translates to: FSPVCRSMCRMSTLL*AVAKLHSGHWWIFS
Trigger: TGAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCGACACATGCTTCTACATACGGGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 90 bp AACCAGAGACTGTGGCAAGAGGCTCTTCTGTTTCTTCTGGCTCCCTaGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: NQRLWQEALLFLLAP*EAPKEHLLEAVALL
Trigger: AAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAGAGCCTCTTGCCACAGTCTCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 90 bp AAGGAGTTCAGAAACTCCTTAGAGCAGACAAGGGCAGAGGAGTTATaGATAGTGGCTCAAGGGTCTAGGGGCAGGAAAGCTGGTCTGGAT +
Preference number: 1 (lower is better)
Translates to: KEFRNSLEQTRAEEL*IVAQGSRGRKAGLD
Trigger: ATCCAGACCAGCTTTCCTGCCCCTAGACCCTTGAGCCACTATTCATAACTCCTCTGCCCTTGTCTGCTCTAAGGAGTTTCTGAACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp CCAAGCCCATCTTGTGTCCAGCCCTCTCTTCCCTGGTTATCTACTTaGAGTCTGTCTCATTCCGCAGCTTCACACATTCAAAGGAGCACT +
Preference number: 1 (lower is better)
Translates to: PSPSCVQPSLPWLST*SLSHSAASHIQRST
Trigger: AGTGCTCCTTTGAATGTGTGAAGCTGCGGAATGAGACAGACTTCAAGTAGATAACCAGGGAAGAGAGGGCTGGACACAAGATGGGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp AATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTaGCCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGC +
Preference number: 1 (lower is better)
Translates to: NQGSRLPQQRLGKET*PQDCTTTLKRTLHS
Trigger: GCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp ACATTCAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTaGAACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCA +
Preference number: 1 (lower is better)
Translates to: TFKGALPLLRDIIFL*NQGQAPHQGGWSGP
Trigger: TGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTaGTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTCCAAT +
Preference number: 1 (lower is better)
Translates to: TLKRTLHSTQSPPLD*FLLSPTGINTSLSN
Trigger: ATTGGAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp CAAGGAAAAGGTAGAGAAAGAGGTTCCCAGGAGACCTCTTGCATGTaGTACATAGGAAGGACACAGAGTATGGCTTTTAAGAATCAGGGC +
Preference number: 1 (lower is better)
Translates to: QGKGRERGSQETSCM*YIGRTQSMAFKNQG
Trigger: GCCCTGATTCTTAAAAGCCATACTCTGTGTCCTTCCTATGTAGCACATGCAAGAGGTCTCCTGGGAACCTCTTTCTCTACCTTTTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 90 bp AGCCCCACTGGTATAAATACATCTCTCTCCAATTTGGCTTCAATATaGTCTGTCATTGTTGGGCAAGAAGGGGAGGTACAAGGGTTGTGG +
Preference number: 1 (lower is better)
Translates to: SPTGINTSLSNLASI*SVIVGQEGEVQGLW
Trigger: CCACAACCCTTGTACCTCCCCTTCTTGCCCAACAATGACAGACCATATTGAAGCCAAATTGGAGAGAGATGTATTTATACCAGTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 90 bp GTGCCTGAACTTGCCATGCTGCGTTTTGTGGTAATGGATTATGACTaGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGG +
Preference number: 1 (lower is better)
Translates to: VPELAMLRFVVMDYD*KSRNDFIGQYTLPW
Trigger: CCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGTCATAATCCATTACCACAAAACGCAGCATGGCAAGTTCAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 90 bp AGCTTTTGGAGCCAGCTGCCTAGCTTCAAACCACAACTTCCTAATTaGGTAATGTTGGGCAAGTTCCTTAACCTCTCCATACCTCAGTCT +
Preference number: 1 (lower is better)
Translates to: SFWSQLPSFKPQLPN*VMLGKFLNLSIPQS
Trigger: AGACTGAGGTATGGAGAGGTTAAGGAACTTGCCCAACATTACCCAATTAGGAAGTTGTGGTTTGAAGCTAGGCAGCTGGCTCCAAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTaGTGTAGGCTCAATCCCATACCGACATCTACAACTAATCTTTCC +
Preference number: 1 (lower is better)
Translates to: PFSFVYSILEFPSSS*CRLNPIPTSTTNLS
Trigger: GGAAAGATTAGTTGTAGATGTCGGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 90 bp GAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACTTTaGTGGAGTGATGGTGAAGAAACTGAGAACTTGCAGGTTAAAAAC +
Preference number: 1 (lower is better)
Translates to: EKMEWVKSRSYSQGL*WSDGEETENLQVKN
Trigger: GTTTTTAACCTGCAAGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR GCA 90 bp ATAACAGTTAATATAAAGTTCTTACAATTCCTGGCACACAGGAAGTaGTATAAAAGAGGCTGGCTGGGAGCGATAGCTTACACCTGTAAT +
Preference number: 1 (lower is better)
Translates to: ITVNIKFLQFLAHRK*YKRGWLGAIAYTCN
Trigger: ATTACAGGTGTAAGCTATCGCTCCCAGCCAGCCTCTTTTATAGCACTTCCTGTGTGCCAGGAATTGTAAGAACTTTATATTAACTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 90 bp ATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTaGAGGTTAAAAACGCAATGTACAGCAATAAGAAATCAACGTTAT +
Preference number: 1 (lower is better)
Translates to: IARDFDGVMVKKLRT*RLKTQCTAIRNQRY
Trigger: ATAACGTTGATTTCTTATTGCTGTACATTGCGTTTTTAACCTGCAAGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATaGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTT +
Preference number: 1 (lower is better)
Translates to: TAIRNQRYSPCPSFI*VIISKYYSQSPRKV
Trigger: AACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR TCA 90 bp GCACAACAGCACATGCGGTTAGATACAACTGTTTTTAGAAGATTCTaGAAGAAAATAGGAATTGACACAGTAAGAAGGAAAGAGAAGATG +
Preference number: 1 (lower is better)
Translates to: AQQHMRLDTTVFRRF*KKIGIDTVRRKEKM
Trigger: CATCTTCTCTTTCCTTCTTACTGTGTCAATTCCTATTTTCTTTCAGAATCTTCTAAAAACAGTTGTATCTAACCGCATGTGCTGTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR-3UTR GCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGCCCACGGGCTGGGGCTaGAGTGGGGTGCCTCCGCTT +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVPTGWG*SGVPPL
Trigger: AAGCGGAGGCACCCCACTGCAGCCCCAGCCCGTGGG...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCGTGTGGGTGAGGGCATaGTGGCGCAGGCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGVWVRA*WRRPAA
Trigger: GGCTGCTGGCCTGCGCCATCATGCCCTCACCCACAC...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVRVGPV*QGGAGK
Trigger: CTTCCCAGCACCACCCTGGCACACCGGCCCCACTCT...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TCCCAGGTTCGTGACCTGGCCCCTCAGGTCGGGCTGACAGCTGGTTaGAGGGCTCTGAATCTGGTGGGGGTGTTGGGCCCTGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: SQVRDLAPQVGLTAG*RALNLVGVLGPAWP
Trigger: GGGCCATGCAGGGCCCAACACCCCCACCAGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACCTGAGGGGCCAGGTCACGAACCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTTGGCTCTGCTGCGGCTaGTGCCGTGTGGCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVWLCCG*CRVALE
Trigger: CTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCA...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCGGCCTTGCGGTCGGGTaGTGCATAGCTGCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGGLAVG*CIAAAL
Trigger: GAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCC...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGGGCCTTGCGGTCGGGTaGTGCATAGCTGCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQGLAVG*CIAAAL
Trigger: GAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCC...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVRVGPV*QGGAGK
Trigger: CTTCCCAGCACCACCCTGGCACACCGGCCCCACTCT...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGGGCTTCACCCCCTCGTaGTTGAGCCGCCGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAGFTPS*LSRRCC
Trigger: GCAGCACCGGCGGCTCAAGCACGAGGGGGTGAAGCC...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCGCCGGTGTGCCAGGGTaGTGCTGGGAAGCCATGTGC +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTAGVPG*CWEAMC
Trigger: GCACATGGCTTCCCAGCACCACCCTGGCACACCGGC...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: AQASSPAESTVAHIAHIGVARVE*GRCARV
Trigger: CACCCTGGCACACCGGCCCCACTCTACCCTTGCCAC...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCACAGTCCCAGGTTCGTaGCCTGGCCCCTCAGGTCGG +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGTVPGS*PGPSGR
Trigger: CCGACCTGAGGGGCCAGGTCACGAACCTGGGACTGT...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTCGGGTGCTGCATAGCTaGAGCCCTCCTGAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVRVLHS*SPPESS
Trigger: GCTGCTTTCAGGAGGGCTGCAGCTATGCAGCACCCG...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGTGGCACAGTGGGCAGTaGTGGGCCTTTTCACCCAGC +
Preference number: 2 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPWHSGQ*WAFSPS
Trigger: GCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCA...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGATCTGGTGGGGGTGTTaGGCCCTGCATGGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQIWWGC*ALHGPF
Trigger: GAAGGGGCCATGCAGGGCCCAACACCCCCACCAGAT...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCATCTGGTGGGGGTGTTaGGCCCTGCATGGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTIWWGC*ALHGPF
Trigger: GAAGGGGCCATGCAGGGCCCAACACCCCCACCAGAT...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCATCTCTGGCAGGGCCTaGTCCAAGCTGGGGTCCACC +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTISGRA*SKLGST
Trigger: GGTGGACCCCAGCTTGGACCAGGCCCTGCCAGAGAT...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGAGCAGGCAAAGGCTaGGGTGCCTTGGTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVGAGKG*GALVAA
Trigger: AGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCGCAGGGGGCCCTCAGTaGTCTCTGCAGGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGAGGPQ*SLQESQ
Trigger: CTGGCTCTCCTGCAGAGACCACTGAGGGCCCCCTGC...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCCGGCAAAAGAAGGGGTaGCGGTCGGTGTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGRQKKG*RSVWVR
Trigger: CCTCACCCACACCGACCGCCACCCCTTCTTTTGCCG...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp CAGCGAAGGGGTAATGGCTCTGCTGCGGCTGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCCTGGCTGAGGCGGAATTCCTCACGG +
Preference number: 2 (lower is better)
Translates to: QRRGNGSAAAAAVWL*RCSFRAWLRRNSSR
Trigger: CCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCATTACCCCTTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGGTCTTaGCCCACACCCTGGTTTGGGTCGGCTTGGTCAGGGTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: SSCTSCRCTVGVVGS*PTPWFGSAWSGWCL
Trigger: CAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCGCACCATGGCTCCGCTaGTGCTGCCGGAAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTAPWLR*CCRKSL
Trigger: CAAACTCTTCCGGCAGCATCAGCGGAGCCATGGTGC...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTTGGGATGGAAGGCCCTaGACGGCAGAAAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVWDGRP*TAESSP
Trigger: GGGAGAACTTTCTGCCGTTCAGGGCCTTCCATCCCA...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGCTGCCGTGTGGCTCTTaGGGTGCTCCTTTAGGGCCT +
Preference number: 2 (lower is better)
Translates to: AQASSPAESTVAHIAHIGLPCGS*GAPLGP
Trigger: AGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAG...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCTTGCGGTCGGGTGCTaGATAGCTGCAGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGLAVGC*IAAALL
Trigger: CAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGGGGGTGTTGGGCCCTaGATGGCCCCTTCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPGGVGP*MAPSGS
Trigger: GGAGCCAGAAGGGGCCATGCAGGGCCCAACACCCCC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTCTGGGGGCAAGAGCTaGAGGGGATGCGGCCAATGC +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGSGGKS*RGCGQC
Trigger: GCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTGCTGCTGCCTCCGGTaGTCATCCAGAGCCAGTCGG +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGCCCLR*SSRASR
Trigger: CCGACTGGCTCTGGATGAGCACCGGAGGCAGCAGCA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGTCACAGAGGGCACAGTaGAACTCACGGAGGCGGGTA +
Preference number: 2 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPSQRAQ*NSRRRV
Trigger: TACCCGCCTCCGTGAGTTCCACTGTGCCCTCTGTGA...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGTCCTTCCAGTCCATCTaGCCCTTCCAGTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQSFQSI*PFQSQG
Trigger: CCCCTGGGACTGGAAGGGCCAGATGGACTGGAAGGA...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGGTGCCTCCGCTTCTaGTGGAGCCTTAAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVGCLRF*WSLKAV
Trigger: CACTGCCTTAAGGCTCCACCAGAAGCGGAGGCACCC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGGGCTGGGGCTGCAGTaGGGTGCCTCCGCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSGLGLQ*GASASG
Trigger: ACCAGAAGCGGAGGCACCCCACTGCAGCCCCAGCCC...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGCAGGGGGCCCTCAGTaGTCTCTGCAGGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQAGGPQ*SLQESQ
Trigger: CTGGCTCTCCTGCAGAGACCACTGAGGGCCCCCTGC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TGTGGGGGTGGTGGGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTaGGTCAGGGTGGTGCCTGCGTACGTGCTTGACCACCTGGAACTT +
Preference number: 2 (lower is better)
Translates to: CGGGGVFAHTLVWVG*VRVVPAYVLDHLEL
Trigger: AAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCTGGGATGGAAGGCCCTaGACGGCAGAAAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTWDGRP*TAESSP
Trigger: GGGAGAACTTTCTGCCGTTCAGGGCCTTCCATCCCA...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGATCAGAGACTTGCCCTaGTGCCGCAGCTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQIRDLP*CRSLWL
Trigger: CAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGAT...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAACAGCCCCGGATCTGGTaGGTCCTCAGAGCCCGTTCC +
Preference number: 2 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKQPRIW*VLRARS
Trigger: GGAACGGGCTCTGAGGACTCACCAGATCCGGGGCTG...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTCACCCCCTCGTGCTTaGGCCGCCGGTGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSASPPRA*AAGAAA
Trigger: TGCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGA...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGGGCGGCTCTGGTAACTaGAGTAGTGGCAAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPGGSGN*SSGKGR
Trigger: TCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCC...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCCATGGGGAGCCTCACTaGCCTCCTGTCTTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTHGEPH*PPVFQC
Trigger: ACACTGGAAGACAGGAGGGCAGTGAGGCTCCCCATG...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGCCTCTAGGTGTAGTGTaGAGCTGCCCTCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQPLGVV*SCPPPP
Trigger: AGGTGGAGGAGGGCAGCTGCACACTACACCTAGAGG...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGTTGAGCCGCCGGTGCTaGTGCATGCAACGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: HRVWPHCACEGGCAAGSALSRRC*CMQRLC
Trigger: ACAGAGCCGTTGCATGCAGCAGCACCGGCGGCTCAA...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGCATCAGCCCGGTTGGTaGAGTACTCACACTCGGGAC +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVHQPGW*STHTRD
Trigger: GTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATG...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCTGGGGTCTGGGAAGTaGAGATGCAGGTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGLGSGK*RCRCST
Trigger: GGTGGAGCACCTGCATCTCCACTTCCCAGACCCCAG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCGCGGCTGCTGCCGTGTaGCTCTTGAGGTGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGAAAAV*LLRCSF
Trigger: AAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGC...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCCCTCTTGTGGGCAGTaGCAAAGTTGCACTCAGGAC +
Preference number: 2 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPPSCGQ*QSCTQD
Trigger: GTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTGGTCGGGCTGACAGCTaGTTTGAGGGCTCTGAATCT +
Preference number: 2 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVGRADS*FEGSES
Trigger: AGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACC...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCCTTGGCACCCAGTCCTaGAGTGCAGATTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGLGTQS*SADSGP
Trigger: AGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAG...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGGAGCAGGCAAAGGCTaGGGTGCCTTGGTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQGAGKG*GALVAA
Trigger: AGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGGGGCAGGAGTTGCAGTaGAACTTGCCCTGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQGQELQ*NLPCSK
Trigger: CTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCC...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACACTCTGCTGCGGCTGCTaGCGTGTGGCTCTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: LLQQVGAEAALLLEASPTLCCGC*RVALEV
Trigger: CACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAG...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCCTTGCGGTCGGGTGCTaGATAGCTGCAGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTALAVGC*IAAALL
Trigger: CAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAG...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGT +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPAAACG*SADQPG
Trigger: ACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGT +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSAAACG*SADQPG
Trigger: ACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGC...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGCTCAGAGCCCGTTCCTaGTGGCAGCTAAAGGGACAT +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVLRARS*WQLKGH
Trigger: ATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCTGAG...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGCTCAGAGCCCGTTCCTaGTGGCAGCTAAAGGGACAT +
Preference number: 2 (lower is better)
Translates to: AQASSPAESTVAHIAHIGLRARS*WQLKGH
Trigger: ATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCTGAG...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTATGAGCACCCTCTTGTaGGCAGTGGCAAAGTTGCAC +
Preference number: 2 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVMSTLL*AVAKLH
Trigger: GTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVVARVE*GRCARV
Trigger: CACCCTGGCACACCGGCCCCACTCTACCCTTGCCAC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCTCCTTCCAGTCCATCTaGCCCTTCCAGTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGSFQSI*PFQSQG
Trigger: CCCCTGGGACTGGAAGGGCCAGATGGACTGGAAGGA...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGCATCAGCCCGGTaGGTGCAGTACTCACACTCGGGACACTGGTATGGCTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SRCRVSWCTRSASAR*VQYSHSGHWYGFSP
Trigger: AGGACTGAAGCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp GCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGTCTaGAAGGCCTTGCCACACTGCTCACACATGAAAGCCCGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: ASLCLRRWVRSRKRV*KALPHCSHMKARAS
Trigger: AGAAGCACGGGCTTTCATGTGTGAGCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGTGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCG +
Preference number: 2 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGWPCGG*VHSSPP
Trigger: CGGTGGAGAGGAATGCACTCAACCGCCACATGGCCA...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAAGCATGGGACATGAGTaGTGGCGGCACTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKSMGHE*WRHSTA
Trigger: GGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCT...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGTCACGTCTCGGCATGTaGAGTCACACAGCTCACACT +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVSRLGM*SHTAHT
Trigger: AGTGTGAGCTGTGTGACTTCACATGCCGAGACGTGA...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAG +
Preference number: 2 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVVSLGP*VMTLTQ
Trigger: CTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGAC...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCGGGTGCTGCATAGCTaGAGCCCTCCTGAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPRVLHS*SPPESS
Trigger: GCTGCTTTCAGGAGGGCTGCAGCTATGCAGCACCCG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCTGCTTGAGCCGCCGGTaGTGCTGCATGCAACGGCTC +
Preference number: 2 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVCLSRR*CCMQRL
Trigger: GAGCCGTTGCATGCAGCAGCACCGGCGGCTCAAGCA...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGTGGTGCCTGCGTACGTaGTTGACCACCTGGAACTTT +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVWCLRT*LTTWNF
Trigger: AAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCA...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCTCCTGGAGGCAGTTTaGGAGCTGGCAGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPLLEAV*ELAAAP
Trigger: AGGAGCTGCTGCCAGCTCCCAAACTGCCTCCAGGAG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGCCATGGCTTCGGCTGTaGCAAAGAGCATGGGACATG +
Preference number: 2 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAPWLRL*QRAWDM
Trigger: CATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGG...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGCTCGCCCCTCTCCCTaGATCACTACCATCTGCACC +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSARPSP*ITTICT
Trigger: GGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGC...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCACATCAGGCTGGGTCTaGGGGGTCCCTCGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGTSGWV*GVPRFP
Trigger: AGGAAAACGAGGGACCCCCCAGACCCAGCCTGATGT...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp CAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTaGTCCCGGCAGGTGAGGCAGGAGGGAGAATACAGTGGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: QIVAQAPISKPESLL*SRQVRQEGEYSGEA
Trigger: TGCCTCCCCACTGTATTCTCCCTCCTGCCTCACCTGCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACAGGCCTGGAGGGGGATaGGTCCTGAGGTGGGCATTT +
Preference number: 2 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDRPGGG*VLRWAF
Trigger: AAATGCCCACCTCAGGACTCATCCCCCTCCAGGCCT...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGCACCATGGCTCCGCTaGTGCTGCCGGAAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: PKASLSLGSELLRLALVPAPWLR*CCRKSL
Trigger: CAAACTCTTCCGGCAGCATCAGCGGAGCCATGGTGC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCTGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCG +
Preference number: 2 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLWPCGG*VHSSPP
Trigger: CGGTGGAGAGGAATGCACTCAACCGCCACATGGCCA...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCAGAGCACTGGTTGCACTaGTACCTGAGGTCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAEHWLH*YLRSPA
Trigger: TGCAGGGGACCTCAGGTATCAGTGCAACCAGTGCTC...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAG +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVVSLGP*VMTLTQ
Trigger: CTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGAC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGGGTATTTCAGCTGGTTaGCCCACTTGCACTTGTAGC +
Preference number: 2 (lower is better)
Translates to: AQASSPAESTVAHIAHIGGISAG*PTCTCS
Trigger: GCTACAAGTGCAAGTGGGTCAACCAGCTGAAATACC...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGCACACTGCTCACACATaGAAGCCCGTGCTTCTCGAT +
Preference number: 2 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAHTAHT*KPVLLD
Trigger: ATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTG...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSVWLLR*SFRAWL
Trigger: CAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACAC...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAAAGGGGCAGAAGGTaGAGCGCAGCTCTTCACTGC +
Preference number: 2 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAQRGRR*SAALHC
Trigger: GCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTTTG...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGTCACGGAGGCGGGTATaGTTGCAGTTCTCATGGCTC +
Preference number: 2 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGSRRRV*LQFSWL
Trigger: GAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGA...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCTCACGGAGGCGGGTATaGTTGCAGTTCTCATGGCTC +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGSRRRV*LQFSWL
Trigger: GAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGA...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCCTCTAGGTGTAGTGTaGAGCTGCCCTCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPPLGVV*SCPPPP
Trigger: AGGTGGAGGAGGGCAGCTGCACACTACACCTAGAGG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAATGGATCACTACCATCTaGACCCGCCCCTCTAGCACC +
Preference number: 2 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKWITTI*TRPSST
Trigger: GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCA...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCCCTGGGAGCACAGGTTaGAGAGGGATGGGTGAATCT +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGPGSTG*RGMGES
Trigger: AGATTCACCCATCCCTCTGCAACCTGTGCTCCCAGG...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTCTCCTGGAGGCAGTTTaGGAGCTGGCAGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSALLEAV*ELAAAP
Trigger: AGGAGCTGCTGCCAGCTCCCAAACTGCCTCCAGGAG...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCGCGGCTGCTGCCGTGTaGCTCTTGAGGTGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTAAAAV*LLRCSF
Trigger: AAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGC...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCACAGCCCGCACCCCATaGGTCTCCTTCAGGTGCTTA +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPTARTP*VSFRCL
Trigger: TAAGCACCTGAAGGAGACCCATGGGGTGCGGGCTGT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGCCATGGCTTCGGCTGTaGCAAAGAGCATGGGACATG +
Preference number: 2 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQPWLRL*QRAWDM
Trigger: CATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGG...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGGGAGGGCTCAGACACTaGCTTTTCCAGAAGGGGATT +
Preference number: 2 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAGGLRH*LFQKGI
Trigger: AATCCCCTTCTGGAAAAGCCAGTGTCTGAGCCCTCC...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCGGAGGGCTCAGACACTaGCTTTTCCAGAAGGGGATT +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGGGLRH*LFQKGI
Trigger: AATCCCCTTCTGGAAAAGCCAGTGTCTGAGCCCTCC...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGTGGGTGAATCTGGTCTaGGCAAGCCCTTGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQWVNLV*ASPCSF
Trigger: GAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCA...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTGGGTGCCTCCGCTTCTaGTGGAGCCTTAAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAGCLRF*WSLKAV
Trigger: CACTGCCTTAAGGCTCCACCAGAAGCGGAGGCACCC...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCAACTGGGCTTCACACTaGGAGCAGGCAAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPNWASH*EQAKAG
Trigger: CCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGTTCCGTTCCTCCTTGTaGATCCGCATGTGGTACTTG +
Preference number: 2 (lower is better)
Translates to: AQASSPAESTVAHIAHIGFRSSL*IRMWYL
Trigger: CAAGTACCACATGCGGATCCACAAGGAGGAACGGAA...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp GGGCAGTGGTGGGCCTTTTCACCCAGCTCCCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTGAAGAACTTCTGGCAGTTAGGGCAC +
Preference number: 2 (lower is better)
Translates to: GQWWAFSPSSRSRWV*SLLLLVKNFWQLGH
Trigger: GTGCCCTAACTGCCAGAAGTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCTGGGTGAAAAGGCCCACCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp GCTGAACTGGGCTTCACACTGGGAGCAGGCAAAGGCTGGGGTGCCTaGGTGGCAGCTGTTGACATGACGAGTGATGTCATGGCGAAGGTA +
Preference number: 2 (lower is better)
Translates to: AELGFTLGAGKGWGA*VAAVDMTSDVMAKV
Trigger: TACCTTCGCCATGACATCACTCGTCATGTCAACAGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TTGGTCAGGGTGGTGCCTGCGTACGTGCTTGACCACCTGGAACTTTaGCTTGGCCTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCG +
Preference number: 2 (lower is better)
Translates to: LVRVVPAYVLDHLEL*LGLVVAEAAKEGVA
Trigger: CGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACGCTGTGGCTATGTGCTaGAGCCAGACTTCCTGCGTG +
Preference number: 2 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDAVAMC*SQTSCV
Trigger: CACGCAGGAAGTCTGGCTTCAGCACATAGCCACAGC...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGAAGCATGTGTCGGATaGGCACCCTCTTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVEACVG*APSCGQ
Trigger: CTGCCCACAAGAGGGTGCTCATCCGACACATGCTTC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCATCAGAGACTTGCCCTaGTGCCGCAGCTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLIRDLP*CRSLWL
Trigger: CAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGAT...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCACTTTCTGTGTCCTCTaGGGCCTGGGTACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLTFCVL*GLGTWE
Trigger: CTCCCAGGTACCCAGGCCTCAGAGGACACAGAAAGT...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCAGCCTTCAGCCACGTaGGAGGTAATAGAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSQPSAT*EVIEES
Trigger: GCTCTCCTCTATTACCTCTCACGTGGCTGAAGGCTG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCTGGCAGCTGTTGACATaGCGAGTGATGTCATGGCGA +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGWQLLT*RVMSWR
Trigger: TCGCCATGACATCACTCGTCATGTCAACAGCTGCCA...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGCATGTGGCGGTTGAGTaGATTCCTCTCCACCGCACT +
Preference number: 2 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGHVAVE*IPLHRT
Trigger: AGTGCGGTGGAGAGGAATGCACTCAACCGCCACATG...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLVWLLR*SFRAWL
Trigger: CAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACAC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCGGCGGCTCTGGTAACTaGAGTAGTGGCAAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTAGGSGN*SSGKGR
Trigger: TCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCC...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTCATGGGGAGCCTCACTaGCCTCCTGTCTTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAHGEPH*PPVFQC
Trigger: ACACTGGAAGACAGGAGGGCAGTGAGGCTCCCCATG...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCTGGATCACTACCATCTaGACCCGCCCCTCTAGCACC +
Preference number: 2 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLWITTI*TRPSST
Trigger: GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCA...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCCCTGCTCAAAGCGGTaGTTCTTCAGGGCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVPCSKR*FFRASV
Trigger: CACAGAGGCCCTGAAGAAGCACCGCTTTGAGCAGGG...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCGGAATGGGCAGGAGTTaGAGTGAAACTTGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGGMGRS*SETCPA
Trigger: AGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCC...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTAGCCGCCGGTGCTGCTaGATGCAACGGCTCTGTTTA +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSASRRCC*MQRLCL
Trigger: TAAACAGAGCCGTTGCATGCAGCAGCACCGGCGGCT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCACTCAAGCCGTGGGTaGTGTTTACGGGTGTGTCCT +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSHSSRG*CLRVCP
Trigger: AGGACACACCCGTAAACAGCACCCACGGCTTGAGTG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTGGCTGAAATGCTGCTaGCTCCGGTGCTCATCCAGA +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPWLKCC*LRCSSR
Trigger: TCTGGATGAGCACCGGAGGCAGCAGCATTTCAGCCA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCCAGCAGCTCCTGGGATaGAAGGCCCTGAACGGCAGA +
Preference number: 2 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIQQLLG*KALNGR
Trigger: TCTGCCGTTCAGGGCCTTCCATCCCAGGAGCTGCTG...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCTTATCCACAGCCTTTTaGGAGTCCTTCTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTLSTAF*ESFWVS
Trigger: TGACACCCAGAAGGACTCCCAAAAGGCTGTGGATAA...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGCAGCGCTTACACTCTaGACACATATGGGTCTTGAA +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVAALTL*THMGLE
Trigger: TTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGAGCTCCCGCAGCAGATaGGTCTTGAGCTTGCTCTTA +
Preference number: 2 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGSSRSR*VLSLLL
Trigger: TAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCT...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTATVVAQ*AVVGLF
Trigger: GAAAAGGCCCACCACTGCCCACTGTGCCACTACAGT...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACATGCTCCTTTAGGGCCTaGCTGAGGCGGAATTCCTCA +
Preference number: 2 (lower is better)
Translates to: LLQQVGAEAALLLEASPTCSFRA*LRRNSS
Trigger: TGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCA...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGTCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: HRVWPHCACEGGCAAGSASSLPG*PCFLCL
Trigger: TAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGA...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGILVSH*VEGGKG
Trigger: CCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGAT...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCCCTCTTGTGGGCAGTaGCAAAGTTGCACTCAGGAC +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSPSCGQ*QSCTQD
Trigger: GTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGTGGGCCTTGCGTTTATaGAACAAGAGTGTGGTGTTG +
Preference number: 2 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQWALRL*NKSVVL
Trigger: CAACACCACACTCTTGTTCCATAAACGCAAGGCCCA...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGGTGTTGGGCCCTGCATaGCCCCTTCTGGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVVLGPA*PLLAPG
Trigger: GCCAGGAGCCAGAAGGGGCCATGCAGGGCCCAACAC...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGTCTTCTGTCGGTTCTTaGTGCTGTAAGCACAATCGG +
Preference number: 2 (lower is better)
Translates to: AQASSPAESTVAHIAHIGSSVGS*CCKHNR
Trigger: CCGATTGTGCTTACAGCACCAAGAACCGACAGAAGA...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp GTCCGCTTCTTAAAGCAGCGCTTACACTCTGGACACATATGGGTCTaGAAGAGGGACTCGGTGCCAGAGACCACATCCCCTTCCAGCCGC +
Preference number: 2 (lower is better)
Translates to: VRFLKQRLHSGHIWV*KRDSVPETTSPSSR
Trigger: GCGGCTGGAAGGGGATGTGGTCTCTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGCTTTAAGAAGCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TGGTGGGCCTTTTCACCCAGCTCCCGCAGCAGATGGGTCTTGAGCTaGCTCTTACTGGTGAAGAACTTCTGGCAGTTAGGGCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: WWAFSPSSRSRWVLS*LLLVKNFWQLGHWR
Trigger: CCTCCAGTGCCCTAACTGCCAGAAGTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCTGGGTGAAAAGGCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCTCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 2 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTSFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCACCGGGTGCTGGTGCCTaGACTTGCCATGCTGCGTTT +
Preference number: 2 (lower is better)
Translates to: GSTGESADLWRSSRHSTAPGAGA*TCHAAF
Trigger: AAACGCAGCATGGCAAGTTCAGGCACCAGCACCCGG...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTGACACATATGGGTCTTaGAGAGGGACTCGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSADTYGS*RGTRCQ
Trigger: CTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTC...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCTGCCGTGTGGCTCTTaGGGTGCTCCTTTAGGGCCT +
Preference number: 2 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNLPCGS*GAPLGP
Trigger: AGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGGGTTGCACTGATACCTaGGGTCCCCTGCATGTTTTC +
Preference number: 2 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGGCTDT*GPLHVF
Trigger: GAAAACATGCAGGGGACCTCAGGTATCAGTGCAACC...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTAGAGTGTGGTGTTGCTaGAGGTGCGGTAGTCACAGA +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSRVWCC*RCGSHR
Trigger: TCTGTGACTACCGCACCTTCAGCAACACCACACTCT...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGAGGTGTGAGCCACCGTaGCCGGCCTTTGGGTGCATT +
Preference number: 2 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVRCEPP*PAFGCI
Trigger: AATGCACCCAAAGGCCGGGCACGGTGGCTCACACCT...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGTTGGAAATATCTTCATaGATGCTGGCCATGTGGCGG +
Preference number: 2 (lower is better)
Translates to: HRVWPHCACEGGCAAGSALEISS*MLAMWR
Trigger: CCGCCACATGGCCAGCATGCATGAAGATATTTCCAA...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGTGGGTCTCCTTCAGGTaGTTAATGAAGGCCTTGCGG +
Preference number: 2 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGWVSFR*LMKALR
Trigger: CCGCAAGGCCTTCATTAAGCACCTGAAGGAGACCCA...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTGGAGGCGGGTATGCTTaGAGTTCTCATGGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAGGGYA*SSHGSA
Trigger: TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCC...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTGTCGGCGCAGAGCATaGTGCTTAAGTGCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPCRRRA*CLSAVS
Trigger: AGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCACTTGTAGAGACGAGTaGCCCCATGCCCTTTCACAT +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGTCRDE*PHALSH
Trigger: ATGTGAAAGGGCATGGGGGCACTCGTCTCTACAAGT...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCGGCTTCAGTCCTGTATaGTTGGTCATGTGGTATTTC +
Preference number: 2 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGGFSPV*LVMWYF
Trigger: GAAATACCACATGACCAAGCATACAGGACTGAAGCC...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCTGGGGTCTGGGAAGTaGAGATGCAGGTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNLGSGK*RCRCST
Trigger: GGTGGAGCACCTGCATCTCCACTTCCCAGACCCCAG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPILVSH*VEGGKG
Trigger: CCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGAT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGGGTCAGCATGTGCTTaGATAGGTAGCTCACGTCTC +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPGSACA*IGSSRL
Trigger: GAGACGTGAGCTACCTATCCAAGCACATGCTGACCC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTGGGCCTTGCGTTTATaGAACAAGAGTGTGGTGTTG +
Preference number: 2 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGWALRL*NKSVVL
Trigger: CAACACCACACTCTTGTTCCATAAACGCAAGGCCCA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCAGGATGGAGGATTTGTaGAGGGCTCAGACACTGGCT +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPRMEDL*RAQTLA
Trigger: AGCCAGTGTCTGAGCCCTCCACAAATCCTCCATCCT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGTGGGTGAATCTGGTCTaGGCAAGCCCTTGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQWVNLV*ASPCSF
Trigger: GAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCA...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCCCCATCACCAGAGCTaGACTCTGTACTCCCATTCT +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPPHHQS*TLYSHS
Trigger: AGAATGGGAGTACAGAGTCCAGCTCTGGTGATGGGG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGTATGCTTGGTCATGTaGTATTTCAGCTGGTTGACC +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVVCLVM*YFSWLT
Trigger: GGTCAACCAGCTGAAATACCACATGACCAAGCATAC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp ACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTaGTGTATATCTGCATCCAGGAAGGCCTGGAGGGGGATGAGTCCT +
Preference number: 2 (lower is better)
Translates to: TCCPKMASASAQLPS*CISASRKAWRGMSP
Trigger: AGGACTCATCCCCCTCCAGGCCTTCCTGGATGCAGATATACACAAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGTCCTATTTCCAAGCCTaGGTCCCTTCTCTTGTCCCG +
Preference number: 2 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQSYFQA*VPSLVP
Trigger: CGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGA...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGAGCATGGGACATGAGTaGTGGCGGCACTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVSMGHE*WRHSTA
Trigger: GGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCT...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCGGTAAGCCACTGGGTTaGAGGTGGCAAAGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFGKPLG*RWQRGR
Trigger: TCTGCCCCTTTGCCACCTTCAACCCAGTGGCTTACC...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCAGAGTCTTGCTCTGCTaGAGGCTGGAGTGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: PSICCQIVAQAPISKPESRVLLC*RLECSG
Trigger: GCCACTGCACTCCAGCCTGCAGCAGAGCAAGACTCT...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTCTGCCAGGGTGGCCCTaGTTCTTGTGTTTACGGAAT +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSALPGWP*FLCLRN
Trigger: ATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAG...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGCATAGCCATGGGCCTTaGGTTTATGGAACAAGAGTG +
Preference number: 2 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGHSHGP*VYGTRV
Trigger: CACTCTTGTTCCATAAACGCAAGGCCCATGGCTATG...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCAGTTGCAGTGAAACTTaGCCTGCTCAAAGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPSCSET*PAQSGA
Trigger: AGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGACGGGGAGAAACATCTaGAAGGATGCTCGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGTGRNI*KDAREN
Trigger: GTTCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGT...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTCTGGTGAAGAACTTCTaGCAGTTAGGGCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSALVKNF*QLGHWR
Trigger: CCTCCAGTGCCCTAACTGCCAGAAGTTCTTCACCAG...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWITVVAQ*AVVGLF
Trigger: GAAAAGGCCCACCACTGCCCACTGTGCCACTACAGT...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCTGCTTGCAGTTCTCATaGCTCAGCACAGCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVCLQFS*LSTACL
Trigger: CAAGCAGGCTGTGCTGAGCCATGAGAACTGCAAGCA...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACTCACAGAGGGCACAGTaGAACTCACGGAGGCGGGTA +
Preference number: 2 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNSQRAQ*NSRRRV
Trigger: TACCCGCCTCCGTGAGTTCCACTGTGCCCTCTGTGA...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCTCCTCACTCATCTCTaGCAGGGCCTGGTCCAAGCT +
Preference number: 2 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNLLTHL*QGLVQA
Trigger: AGCTTGGACCAGGCCCTGCCAGAGATGAGTGAGGAG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp AGCACAGGTTGCAGAGGGATGGGTGAATCTGGTCTGGGCAAGCCCTaGTTCTTTCTGAGTAGAACAGGGCACTTCTTCAGCAGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: STGCRGMGESGLGKP*FFLSRTGHFFSRWV
Trigger: CACCCACCTGCTGAAGAAGTGCCCTGTTCTACTCAGAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCATCCCTCTGCAACCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCTCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 2 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFSFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGCCCATCAACTCTGTGTaGAGGCAGGTTGCAACTAGA +
Preference number: 2 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQPINSV*RQVATR
Trigger: TCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGG...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTTGAGCCCAGGAGTTTaGGACCAGTCTGAAACTGGT +
Preference number: 2 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGLSPGV*DQSETG
Trigger: ACCAGTTTCAGACTGGTCTCAAACTCCTGGGCTCAA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGCCTTTAGGGCCTGGCTaGGGCGGAATTCCTCACGGC +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKPLGPG*GGIPHG
Trigger: GCCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGG...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCAAAGAGCATGGGACATaGGTGATGGCGGCACTCCAC +
Preference number: 2 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFKEHGT*VMAALH
Trigger: GTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTT...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCGCTGATGGCGGCATGTaGAGTCACAAAAGGGGCAGT +
Preference number: 2 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFADGGM*SHKRGS
Trigger: ACTGCCCCTTTTGTGACTTCACATGCCGCCATCAGC...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACGAGCAGAGTCCCCATTaGTCAACGGGGACACATCAG +
Preference number: 2 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNEQSPH*STGTHQ
Trigger: CTGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTC...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTTGTAAGCACAATCGGTaGACTTGTAGAGACGAGTGC +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSCKHNR*TCRDEC
Trigger: GCACTCGTCTCTACAAGTGCACCGATTGTGCTTACA...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCTGTAATCCTTGGTGTTaGAGTGGGTCAGCATGTGCT +
Preference number: 2 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTACNPWC*SGSACA
Trigger: AGCACATGCTGACCCACTCCAACACCAAGGATTACA...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTCTCTTCTGTTTCTTCTaGCTCCCTGGGAAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSALFCFF*LPGKLQ
Trigger: TTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAGAG...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGGGAACCAGAGACTGTaGCAAGAGGCTCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLGNQRL*QEALLF
Trigger: AAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp CCTTTATTCCCATTCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTaGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTC +
Preference number: 2 (lower is better)
Translates to: PLFPFPPPGCDVPAV*SVYLLSDCGPGSYF
Trigger: GAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGAATGGGAATAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CAA 90 bp GGCTTCTCACCCGTATGTAGAAGCATGTGTCGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTT +
Preference number: 2 (lower is better)
Translates to: GFSPVCRSMCRMSTL*WAVAKLHSGHWWIF
Trigger: AAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCGACACATGCTTCTACATACGGGTGAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp GGTGCTGTCTCAGCAGGTGGAGTTGTCTTGAAGGTTCCTACCCAGTaGTTAGGAGCCTCCTCTAAGGATGGAGGATTTGTGGAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: GAVSAGGVVLKVPTQ*LGASSKDGGFVEGS
Trigger: TGAGCCCTCCACAAATCCTCCATCCTTAGAGGAGGCTCCTAACAACTGGGTAGGAACCTTCAAGACAACTCCACCTGCTGAGACAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp ACCATCTGCACCCGCCCCTCTAGCACCAATGCCTCTGCTTGTTCTTaGTCCTGTCTCCTTAGGGCCTTGAGTAATGACTCTGACTCAGGT +
Preference number: 2 (lower is better)
Translates to: TICTRPSSTNASACS*SCLLRALSNDSDSG
Trigger: ACCTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTGCTAGAGGGGCGGGTGCAGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp CTTCTGTTTCTTCTGGCTCCCTGGGAAGCTCCAAAGGAGCATCTTTaGGAAGCAGTAGCTCTGCTTCTTGTGATGCAGGTGGGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LLFLLAPWEAPKEHL*EAVALLLVMQVGAS
Trigger: GGAAGCCCCCACCTGCATCACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp GCTAAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCCATCACCAGAGCTGGACTCTGTACT +
Preference number: 2 (lower is better)
Translates to: AKGTCRAGEASPLLL*NQNCIPITRAGLCT
Trigger: AGTACAGAGTCCAGCTCTGGTGATGGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCTGTGGAGAACAATGGTaGGAAACTGGCAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: PSICCQIVAQAPISKPESCGEQW*ETGSAG
Trigger: CCCAGCACTGCCAGTTTCTCACCATTGTTCTCCACA...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCTGCTGGAGAGAAGGGTaGAGAGTAGGCATGGTCCTT +
Preference number: 2 (lower is better)
Translates to: PSICCQIVAQAPISKPESCWREG*RVGMVL
Trigger: AAGGACCATGCCTACTCTTCACCCTTCTCTCCAGCA...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCATGGTGGATCTTTTCATaGGCATGCATCTTGCCTACA +
Preference number: 2 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAWWIFS*ACILPT
Trigger: TGTAGGCAAGATGCATGCTCATGAAAAGATCCACCA...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTTGGTGGATCTTTTCATaGGCATGCATCTTGCCTACA +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSWWIFS*ACILPT
Trigger: TGTAGGCAAGATGCATGCTCATGAAAAGATCCACCA...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCTACCCCAGCTCTGGCTaGCTTCCTAATGCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: PLFCPSICCQIVAQAPISYPSSG*LPNAVL
Trigger: GAGGACAGCATTAGGAAGGCAGCCAGAGCTGGGGTA...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGTCTGAGACAGAGTCTTaGTCTGCTGCAGGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVSETES*SAAGWS
Trigger: ACTCCAGCCTGCAGCAGAGCAAGACTCTGTCTCAGA...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGGTGTAGTGTGCAGCTaGCCTCCTCCACCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKGVVCS*PPPPLL
Trigger: CAGCAGAGGTGGAGGAGGGCAGCTGCACACTACACC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGCAGCGCTTACACTCTaGACACATATGGGTCTTGAA +
Preference number: 2 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLAALTL*THMGLE
Trigger: TTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGCTGGAGGCTGGGGTCTaGGAAGTGGAGATGCAGGTG +
Preference number: 2 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLLEAGV*EVEMQV
Trigger: CACCTGCATCTCCACTTCCCAGACCCCAGCCTCCAG...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGTGCATGCTGGCCATGTaGCGGTTGAGTGCATTCCTC +
Preference number: 2 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVCMLAM*RLSAFL
Trigger: GAGGAATGCACTCAACCGCCACATGGCCAGCATGCA...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCTGTCTGAGTAGAAGTTaGAAATATCTTCATGCATGC +
Preference number: 2 (lower is better)
Translates to: KARPSPWITTICTRPSSTCLSRS*KYLHAC
Trigger: GCATGCATGAAGATATTTCCAACTTCTACTCAGACA...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGAATAGGTGCTTATTaGAACAAGCAAAATCACAGT +
Preference number: 2 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVGIGAY*NKQNHS
Trigger: ACTGTGATTTTGCTTGTTCCAATAAGCACCTATTCC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGTGCCAGGGTGGTGCTaGGAAGCCATGTGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKVPGWC*EAMCFC
Trigger: GCAGAAGCACATGGCTTCCCAGCACCACCCTGGCAC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTATGTGGTATTTCAGCTaGTTGACCCACTTGCACTTG +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSMWYFS*LTHLHL
Trigger: CAAGTGCAAGTGGGTCAACCAGCTGAAATACCACAT...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCTCAGTCCTGTATGCTTaGTCATGTGGTATTTCAGCT +
Preference number: 2 (lower is better)
Translates to: RSASARLVQYSHSGHWYGSVLYA*SCGISA
Trigger: AGCTGAAATACCACATGACCAAGCATACAGGACTGA...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp AGCACCAATGCCTCTGCTTGTTCTTTGTCCTGTCTCCTTAGGGCCTaGAGTAATGACTCTGACTCAGGTAATGGGGGCAAGGGTGCTGTC +
Preference number: 2 (lower is better)
Translates to: STNASACSLSCLLRA*SNDSDSGNGGKGAV
Trigger: GACAGCACCCTTGCCCCCATTACCTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCAGGTGGAGTTGTCTTaGAGGTTCCTACCCAGTTGT +
Preference number: 2 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNQVELS*RFLPSC
Trigger: ACAACTGGGTAGGAACCTTCAAGACAACTCCACCTG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCAGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCC +
Preference number: 2 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAALVPV*TSQTIP
Trigger: GGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGC...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCAGGCGCCCGCCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: PSICCQIVAQAPISKPESRRPPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGCGGGCGCCT...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCATAGCCACATTCAGTaGACATGTAATCCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: SHMKARASRCRVSWCTRSHSHIQ*TCNPWC
Trigger: ACACCAAGGATTACATGTGCACTGAATGTGGCTATG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTG +
Preference number: 2 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFEAMCF*SSYFRL
Trigger: CAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTC...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGCTGAGGCCGCGTTGTTaGTTGAAGCTAGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKLRPRC*LKLAPH
Trigger: GTGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAG...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTGAAGGACACAGAGTATaGCTTTTAAGAATCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVEGHRV*LLRIRA
Trigger: TGCCCTGATTCTTAAAAGCCATACTCTGTGTCCTTC...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGACATGGGAGGCAGTGTaGAACAGTACAAAGAATCCT +
Preference number: 2 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQTWEAV*NSTKNP
Trigger: AGGATTCTTTGTACTGTTCCACACTGCCTCCCATGT...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCAGCAACTCCCCAAAGTaGACAAGACCAAAGAGGGGT +
Preference number: 2 (lower is better)
Translates to: PSICCQIVAQAPISKPESSNSPK*TRPKRG
Trigger: ACCCCTCTTTGGTCTTGTCCACTTTGGGGAGTTGCT...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATCACAGTGAAACTTTCTaGAGCCAGCTTCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDHSETF*SQLQML
Trigger: CAGCATCTGAAGCTGGCTCCAGAAAGTTTCACTGTG...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCCCTCATCAAGGAGGCTaGTCAGGACCAAAATGGAGG +
Preference number: 2 (lower is better)
Translates to: PLFCPSICCQIVAQAPISPHQGG*SGPKWR
Trigger: CCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGG...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCCACTCTGGACACATATaGGTCTTGAAGAGGGACTCG +
Preference number: 2 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFHSGHI*VLKRDS
Trigger: CGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTG...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACTCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNSSLPG*PCFLCL
Trigger: TAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGA...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCTTGTGGATCCGCATGTaGTACTTGAGACGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFLWIRM*YLRREG
Trigger: TCCCTCTCGTCTCAAGTACCACATGCGGATCCACAA...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp CAGAAGGTGCAGCGCAGCTCTTCACTGCCAGGGTGGCCCTGCTTCTaGTGTTTACGGAATAGGTGCTTATTGGAACAAGCAAAATCACAG +
Preference number: 2 (lower is better)
Translates to: QKVQRSSSLPGWPCF*CLRNRCLLEQAKSQ
Trigger: CTGTGATTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGAGCTGCGCTGCACCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCATCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 2 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPASFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCCGGGTGGGGCTGGGCTaGGCAGGAACTTGTGAGATT +
Preference number: 2 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFRVGLG*AGTCEI
Trigger: AATCTCACAAGTTCCTGCTCAGCCCAGCCCCACCCG...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGGACACATATGGGTCTTaGAGAGGGACTCGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLDTYGS*RGTRCQ
Trigger: CTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTC...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGGCTCTGTTTACAGGTaGAGCCACAGTCCCCACACT +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKGSVYR*SHSPHT
Trigger: AGTGTGGGGACTGTGGCTTCACCTGTAAACAGAGCC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGAGACCTCTTGCATGTaGTACATAGGAAGGACACAG +
Preference number: 2 (lower is better)
Translates to: HIHLLSKDGISLRPASIFETSCM*YIGRTQ
Trigger: CTGTGTCCTTCCTATGTAGCACATGCAAGAGGTCTC...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGAGTCCCCCACTGGACTaGTTCCTCCTTAGCCCCACT +
Preference number: 2 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRSPPLD*FLLSPT
Trigger: AGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACT...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGCTCTTAAGAGAACACTaGACAGCACTCAAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVLLREH*TALKVP
Trigger: GGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAG...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATCTCTGCTGCGGCTGCTaGCGTGTGGCTCTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDLCCGC*RVALEV
Trigger: CACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAG...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCAGCAGCTCCTGGGATaGAAGGCCCTGAACGGCAGA +
Preference number: 2 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKQQLLG*KALNGR
Trigger: TCTGCCGTTCAGGGCCTTCCATCCCAGGAGCTGCTG...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGGTCGGGCTGACAGCTaGTTTGAGGGCTCTGAATCT +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKGRADS*FEGSES
Trigger: AGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAAAGTGGACAGAAGTaGGTAGGTGTTTTGTCATGT +
Preference number: 2 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVQSGQK*VGVLSC
Trigger: ACATGACAAAACACCTACCCACTTCTGTCCACTTTG...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTACTATAGTCACAAAGTaGACAGAAGTGGGTAGGTGT +
Preference number: 2 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSATIVTK*TEVGRC
Trigger: ACACCTACCCACTTCTGTCCACTTTGTGACTATAGT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TCCAAGCCCATCTTGTGTCCAGCCCTCTCTTCCCTGGTTATCTACTaGAAGTCTGTCTCATTCCGCAGCTTCACACATTCAAAGGAGCAC +
Preference number: 2 (lower is better)
Translates to: SKPILCPALSSLVIY*KSVSFRSFTHSKEH
Trigger: GTGCTCCTTTGAATGTGTGAAGCTGCGGAATGAGACAGACTTCAAGTAGATAACCAGGGAAGAGAGGGCTGGACACAAGATGGGCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCACAGGCATAGGTGTCTaGGTAGAAGTTGGAAATATC +
Preference number: 2 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWITGIGV*VEVGNI
Trigger: GATATTTCCAACTTCTACTCAGACACCTATGCCTGT...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGAGCACTGGTTGCACTaGTACCTGAGGTCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKEHWLH*YLRSPA
Trigger: TGCAGGGGACCTCAGGTATCAGTGCAACCAGTGCTC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGGAATGGGCAGGAGTTaGAGTGAAACTTGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKGMGRS*SETCPA
Trigger: AGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTAATTTGGCTTCAATATaGTCTGTCATTGTTGGGCAA +
Preference number: 2 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVNLASI*SVIVGQ
Trigger: TTGCCCAACAATGACAGACCATATTGAAGCCAAATT...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTGTTTTCATAAGCCTTTaGTATCTTTCCTGCCCTTTT +
Preference number: 2 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVVFISL*YLSCPF
Trigger: AAAAGGGCAGGAAAGATACCAAAGGCTTATGAAAAC...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATTGGCACAGTGGGCAGTaGTGGGCCTTTTCACCCAGC +
Preference number: 2 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDWHSGQ*WAFSPS
Trigger: GCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCA...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGAGAGCCCGTTCCTGCTaGCAGCTAAAGGGACATGTA +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKRARSC*QLKGHV
Trigger: TACATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCT...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp AGCCAGCTGCCTAGCTTCAAACCACAACTTCCTAATTGGGTAATGTaGGGCAAGTTCCTTAACCTCTCCATACCTCAGTCTGCTCACCTG +
Preference number: 2 (lower is better)
Translates to: SQLPSFKPQLPNWVM*GKFLNLSIPQSAHL
Trigger: CAGGTGAGCAGACTGAGGTATGGAGAGGTTAAGGAACTTGCCCAACATTACCCAATTAGGAAGTTGTGGTTTGAAGCTAGGCAGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCAGACAGGGATTTGGATaGATCTATAATGTAGTAACC +
Preference number: 2 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGRQGFG*IYNVVT
Trigger: GGTTACTACATTATAGATTCATCCAAATCCCTGTCT...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATGAAGCATGTGTCGGATaGGCACCCTCTTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDEACVG*APSCGQ
Trigger: CTGCCCACAAGAGGGTGCTCATCCGACACATGCTTC...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCAACCCTGCCTTGGACCTaGATGCAACAAGGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPTLPWT*MQQGEP
Trigger: TGGCTCACCTTGTTGCATGCAGGTCCAAGGCAGGGT...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCATGCTGCAGGCTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPCCRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACTCCAGCCTGCAGCA...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGATACCTGAGGTCCCCTaGATGTTTTCGCATGTGCAC +
Preference number: 2 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKIPEVP*MFSHVH
Trigger: GTGCACATGCGAAAACATGCAGGGGACCTCAGGTAT...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGGGTCAAGGGTCAAGATaGCTCAAGGACAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRGQGSR*LKDREK
Trigger: CTTCTCCCTGTCCTTGAGCCATCTTGACCCTTGACC...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCACTCAAAGTCCCCCACTaGACTGCTTCCTCCTTAGCC +
Preference number: 2 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPLKVPH*TASSLA
Trigger: GGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAG...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAAAAGCTCCAGTGACCTaGGCAAATTACTTGCTTACT +
Preference number: 2 (lower is better)
Translates to: GSTGESADLWRSSRHSTAKAPVT*ANYLLT
Trigger: AGTAAGCAAGTAATTTGCCCAGGTCACTGGAGCTTT...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGCACTCTGGACACATATaGGTCTTGAAGAGGGACTCG +
Preference number: 2 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLHSGHI*VLKRDS
Trigger: CGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTG...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTCTGGAAATCCCGAAATaGCTTTATTGGTCAGTACAC +
Preference number: 2 (lower is better)
Translates to: DQRGVHCGSTGESADLWRLEIPK*LYWSVH
Trigger: GTGTACTGACCAATAAAGTCATTTCGGGATTTCCAG...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATTCTTCAGCTGTCTCCTaGCCAGGCAAGGGTGTACCT +
Preference number: 2 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDSSAVS*PGKGVP
Trigger: AGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGTAATGGATTATGACTaGAAATCCCGAAATGACTTT +
Preference number: 2 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQVMDYD*KSRNDF
Trigger: AAAGTCATTTCGGGATTTCCAGTCATAATCCATTAC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATCTGTGGCAAAGAGCATaGGACATGAGTGATGGCGGC +
Preference number: 2 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDLWQRA*DMSDGG
Trigger: GCCGCCATCACTCATGTCCCATGCTCTTTGCCACAG...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp CAATTCCATCTTCTTTTCCACCTTCTCCAGAAATCCAAGCCCATCTaGTGTCCAGCCCTCTCTTCCCTGGTTATCTACTTGAAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: QFHLLFHLLQKSKPI*CPALSSLVIYLKSV
Trigger: GACAGACTTCAAGTAGATAACCAGGGAAGAGAGGGCTGGACACAAGATGGGCTTGGATTTCTGGAGAAGGTGGAAAAGAAGATGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATTCACGTCTCGGCATGTaGAGTCACACAGCTCACACT +
Preference number: 2 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDSRLGM*SHTAHT
Trigger: AGTGTGAGCTGTGTGACTTCACATGCCGAGACGTGA...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCACCGCCACATTCACCTaGTGTCCAAAGATGGCATCA +
Preference number: 2 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFTATFT*CPKMAS
Trigger: TGATGCCATCTTTGGACAGCAGGTGAATGTGGCGGT...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTTTATCCACAGCCTTTTaGGAGTCCTTCTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: VVLPLGDIATFSAHVILGLSTAF*ESFWVS
Trigger: TGACACCCAGAAGGACTCCCAAAAGGCTGTGGATAA...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 90 bp TGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTCCAATTaGGCTTCAATATGGTCTGTCATTGTTGGGCAAGAAGGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: CFLLSPTGINTSLSN*ASIWSVIVGQEGEV
Trigger: TACCTCCCCTTCTTGCCCAACAATGACAGACCATATTGAAGCCAAATTGGAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR TCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTAATCTTCTTAACTCCCTaGAAGAGGGGCTGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLIFLTP*KRGWKA
Trigger: GGCCTTCCAGCCCCTCTTTCAGGGAGTTAAGAAGAT...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTG +
Preference number: 2 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDEAMCF*SSYFRL
Trigger: CAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTC...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCC +
Preference number: 2 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIALVPV*TSQTIP
Trigger: GGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR-3UTR CCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGTTTTGGGAGTCCTTCTaGGTGTCACTCTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKFWESF*VSLFSS
Trigger: AGAAGAGAAGAGTGACACCCAGAAGGACTCCCAAAA...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 2 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVISFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGGGAATAGGTGCTTATTaGAACAAGCAAAATCACAGT +
Preference number: 2 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLGIGAY*NKQNHS
Trigger: ACTGTGATTTTGCTTGTTCCAATAAGCACCTATTCC...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR TCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCAAGTATCAATACTGAGTaGAGATGGAAGGGACAAAAG +
Preference number: 2 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPSINTE*RWKGQK
Trigger: CTTTTGTCCCTTCCATCTTCACTCAGTATTGATACT...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCACTTTGGTATCTTTCCTaGCCTTTTCCTTTGTGTACT +
Preference number: 2 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPLWYLS*PFPLCT
Trigger: AGTACACAAAGGAAAAGGGCAGGAAAGATACCAAAG...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR GCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTTGTTTACGGAATAGGTaGTTATTGGAACAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: VVLPLGDIATFSAHVILGCLRNR*LLEQAK
Trigger: TTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACA...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTAAAAATTAGCCTGGCATaGTGGCACATGACTATAGAT +
Preference number: 2 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLKISLA*WHMTID
Trigger: ATCTATAGTCATGTGCCACCATGCCAGGCTAATTTT...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGGCTCTCGGCGGCCTaGGCACCCAGTCCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVGLSAA*APSPGV
Trigger: CACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GGGCAGTGTGGGCAGCGGAAGGCTCGCCCCTCTCCCTaGATCACTACCATCTGCACCCGCCCCTCTAGCACC +
Preference number: 3 (lower is better)
Translates to: GQCGQRKARPSP*ITTICTRPSST
Trigger: GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTTCCGCTGCCCACACTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CCACACTCGGGGCACAGCAGGGGCTCTCGGCGGCCTTaGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: PHSGHSRGSRRP*HPVLECRFRAF
Trigger: GAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCCCTGCTGTGCCCCGAGTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGTTCACCCCCTCGTGCTaGAGCCGCCGGTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: AQASSPAESTVAHIAHIGFTPSC*SRRCCC
Trigger: GCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAA...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp CAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCATaGTGGCGCAGGCCAGCAGCCCAGCGGAAAGCACGG +
Preference number: 3 (lower is better)
Translates to: QKKGWRSVWVRA*WRRPAAQRKAR
Trigger: CCGTGCTTTCCGCTGGGCTGCTGGCCTGCGCCATCATGCCCTCACCCACACCGACCGCCACCCCTTCTTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGTTCACCCCCTCGTGCTaGAGCCGCCGGTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAFTPSC*SRRCCC
Trigger: GCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAA...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGCTGGTTTGGGTCGGCTaGGTCAGGGTGGTGCCTGCG +
Preference number: 3 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVLVWVG*VRVVPA
Trigger: CGCAGGCACCACCCTGACCAAGCCGACCCAAACCAG...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTaGACTGTGGGGGTGGTGGGGTCTTTGCCCACACCC +
Preference number: 3 (lower is better)
Translates to: GGLGSSSCTSCR*TVGVVGSLPTP
Trigger: GGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CAGGGCCTTCTCCCGGCGAGTGATAAAAGGGCAGTGTaGGCAGCGGAAGGCTCGCCCCTCTCCCTGGATCAC +
Preference number: 3 (lower is better)
Translates to: QGLLPASDKRAV*AAEGSPLSLDH
Trigger: GTGATCCAGGGAGAGGGGCGAGCCTTCCGCTGCCCACACTGCCCTTTTATCACTCGCCGGGAGAAGGCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTaGCAGGGCTGGGGCACAGCAACCCACAGCGGGAAC +
Preference number: 3 (lower is better)
Translates to: AVGAVYGCVLVS*QGWGTATHSGN
Trigger: GTTCCCGCTGTGGGTTGCTGTGCCCCAGCCCTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TGTGGGGGTGGTGGGGTCTTTGCCCACACCCTGGTTTaGGTCGGCTTGGTCAGGGTGGTGCCTGCGTACGTG +
Preference number: 3 (lower is better)
Translates to: CGGGGVFAHTLV*VGLVRVVPAYV
Trigger: CACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGCTCTGCTGCGGCTGCTGCCGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTGAGGCGGAATTCCTCA +
Preference number: 3 (lower is better)
Translates to: GSAAAAAVWLLR*SFRAWLRRNSS
Trigger: TGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp AAGGCCTCCTGGCAGGCCCCACACTCAAGCCGTGGGTaGTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: KASWQAPHSSRG*CLRVCPRKLAG
Trigger: CCCTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGGCCTGCCAGGAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GCGGCTCTGGTAACTGCAGTAGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTGGTGCTGGGAAGCCAT +
Preference number: 3 (lower is better)
Translates to: AALVTAVVARVE*GRCARVVLGSH
Trigger: ATGGCTTCCCAGCACCACCCTGGCACACCGGCCCCACTCTACCCTTGCCACTACTGCAGTTACCAGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp AGGGCTCTGAATCTGGTGGGGGTGTTGGGCCCTGCATaGCCCCTTCTGGCTCCTGGCTTGCATAGCGGAGCT +
Preference number: 3 (lower is better)
Translates to: RALNLVGVLGPA*PLLAPGLHSGA
Trigger: AGCTCCGCTATGCAAGCCAGGAGCCAGAAGGGGCCATGCAGGGCCCAACACCCCCACCAGATTCAGAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GTGGGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTTaGTCAGGGTGGTGCCTGCGTACGTGCTTGACCACC +
Preference number: 3 (lower is better)
Translates to: VGSLPTPWFGSA*SGWCLRTCLTT
Trigger: GGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTaGTGGGGTCTTTGCCCACACCCTGGTTTGGGTCGG +
Preference number: 3 (lower is better)
Translates to: PPAAHHAGALWG*WGLCPHPGLGR
Trigger: CCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCAATCTGGTGGGGGTGTaGGGCCCTGCATGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGNLVGV*GPAWPL
Trigger: AAGGGGCCATGCAGGGCCCAACACCCCCACCAGATT...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGAGCAGGAAGCGCGTCTaGAAGGCCTTGCCACACTGC +
Preference number: 3 (lower is better)
Translates to: AQASSPAESTVAHIAHIGSRKRV*KALPHC
Trigger: GCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGCT...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp CTCCATGGCTTCGGCTGTGGCAAAGAGCATGGGACATaGGTGATGGCGGCACTCCACAGCCCGCACCCCATG +
Preference number: 3 (lower is better)
Translates to: LHGFGCGKEHGT*VMAALHSPHPM
Trigger: CATGGGGTGCGGGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp GCCGGTGCTGCTGCATGCAACGGCTCTGTTTACAGGTaGAGCCACAGTCCCCACACTGTAGATGGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: AGAAACNGSVYR*SHSPHTVDGAG
Trigger: CCCGGCCCCATCTACAGTGTGGGGACTGTGGCTTCACCTGTAAACAGAGCCGTTGCATGCAGCAGCACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp CGGAAGGCTCGCCCCTCTCCCTGGATCACTACCATCTaGACCCGCCCCTCTAGCACCAATGCCTCTGCTTGT +
Preference number: 3 (lower is better)
Translates to: RKARPSPWITTI*TRPSSTNASAC
Trigger: ACAAGCAGAGGCATTGGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp AGGGGCTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTaGAGATTCAGGGCCTTCTCCCGGCGAGTGATAAAA +
Preference number: 3 (lower is better)
Translates to: RGSRRPWHPVLE*RFRAFSRRVIK
Trigger: TTTTATCACTCGCCGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGCTTCACCCCCTCGTGCTTGAGCCGCCGGTGCTGCTaGATGCAACGGCTCTGTTTACAGGTGAAGCCACAG +
Preference number: 3 (lower is better)
Translates to: GFTPSCLSRRCC*MQRLCLQVKPQ
Trigger: CTGTGGCTTCACCTGTAAACAGAGCCGTTGCATGCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp TGGGGCTTCACCCCCTCGTGCTTGAGCCGCCGGTGCTaGTGCATGCAACGGCTCTGTTTACAGGTGAAGCCA +
Preference number: 3 (lower is better)
Translates to: WGFTPSCLSRRC*CMQRLCLQVKP
Trigger: TGGCTTCACCTGTAAACAGAGCCGTTGCATGCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GCAGGCTGTGCAGGCTCGGGGTGTCGGCGCAGAGCATaGTGCTTAAGTGCTGTCTCTGAGCTGAACTGGGCT +
Preference number: 3 (lower is better)
Translates to: AGCAGSGCRRRA*CLSAVSELNWA
Trigger: AGCCCAGTTCAGCTCAGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACACCCCGAGCCTGCACAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp TGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTaGATCAGCCCGGTTGGTGCAGTACTCACACTCGGG +
Preference number: 3 (lower is better)
Translates to: CFSMPGLLVHTQ*ISPVGAVLTLG
Trigger: CCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp CATCATGCAGGTGCACTGTGGGGGTGGTGGGGTCTTTaGCCACACCCTGGTTTGGGTCGGCTTGGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: HHAGALWGWWGL*PHPGLGRLGQG
Trigger: ACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GAGTGCATTCCTCTCCACCGCACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTCACCCAGCTCCCGCAG +
Preference number: 3 (lower is better)
Translates to: ECIPLHRTVVAQ*AVVGLFTQLPQ
Trigger: CTGCGGGAGCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCACTACAGTGCGGTGGAGAGGAATGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GCTGCCGTGTGGCTCTTGAGGTGCTCCTTTAGGGCCTaGCTGAGGCGGAATTCCTCACGGCAGACAGGACAG +
Preference number: 3 (lower is better)
Translates to: AAVWLLRCSFRA*LRRNSSRQTGQ
Trigger: CTGTCCTGTCTGCCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTaGGTACCTGGGAGCACAGGTTGCAGAGGGATGGGT +
Preference number: 3 (lower is better)
Translates to: GGGFPLSVSSEA*VPGSTGCRGMG
Trigger: ACCCATCCCTCTGCAACCTGTGCTCCCAGGTACCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TGCTCATCCAGAGCCAGTCGGCTAGGGAAGGCCTCCTaGCAGGCCCCACACTCAAGCCGTGGGTGCTGTTTA +
Preference number: 3 (lower is better)
Translates to: CSSRASRLGKAS*QAPHSSRGCCL
Trigger: TAAACAGCACCCACGGCTTGAGTGTGGGGCCTGCCAGGAGGCCTTCCCTAGCCGACTGGCTCTGGATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTaGTGCACACGCAGTGCATCAGCCCGGTTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: HMKARASRCRVS*CTRSASARLVQ
Trigger: CTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCCTGGCCATGTGGCGGTaGAGTGCATTCCTCTCCACC +
Preference number: 3 (lower is better)
Translates to: RSASARLVQYSHSGHWYGLAMWR*SAFLST
Trigger: GGTGGAGAGGAATGCACTCAACCGCCACATGGCCAG...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGGGGTGGCCCTGCTTCTaGTGTTTACGGAATAGGTGC +
Preference number: 3 (lower is better)
Translates to: AQASSPAESTVAHIAHIGGWPCF*CLRNRC
Trigger: GCACCTATTCCGTAAACACAAGAAGCAGGGCCACCC...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTGGGCAGTGGCAAAGTaGCACTCAGGACACTGGTGG +
Preference number: 3 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGWAVAK*HSGHWW
Trigger: CCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGCGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTG +
Preference number: 3 (lower is better)
Translates to: HRVWPHCACEGGCAAGSARMSTL*WAVAKL
Trigger: CAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCG...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACACTTCTGGCTCCTGGCTaGCATAGCGGAGCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: LLQQVGAEAALLLEASPTLLAPG*HSGAAR
Trigger: CCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAAG...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAAATCTGGTGGGGGTGTaGGGCCCTGCATGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: LLQQVGAEAALLLEASPTNLVGV*GPAWPL
Trigger: AAGGGGCCATGCAGGGCCCAACACCCCCACCAGATT...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTCTAAGGATGGAGGATTaGTGGAGGGCTCAGACACTG +
Preference number: 3 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVLRMED*WRAQTL
Trigger: CAGTGTCTGAGCCCTCCACAAATCCTCCATCCTTAG...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGCCTCTGCTTGTTCTTaGTCCTGTCTCCTTAGGGCC +
Preference number: 3 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVASACS*SCLLRA
Trigger: GGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp CAGGGGATGCGGCCAATGCCTGTGTGTCGGGACTGGTaGGCCTCTAACCGGTACCGTCTGGTGGTCGAAAAG +
Preference number: 3 (lower is better)
Translates to: QGMRPMPVCRDW*ASNRYRLVVEK
Trigger: CTTTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCATTGGCCGCATCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGTGTGCCAGGGTGGTGCTGGGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTGCAGGCGAAGGCACAC +
Preference number: 3 (lower is better)
Translates to: GVPGWCWEAMCF*SSYFRLQAKAH
Trigger: GTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTCCCAGCACCACCCTGGCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp AACTGCAGTAGTGGCAAGGGTAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAGCCATGTGCTTCTGCA +
Preference number: 3 (lower is better)
Translates to: NCSSGKGRVGPV*QGGAGKPCASA
Trigger: TGCAGAAGCACATGGCTTCCCAGCACCACCCTGGCACACCGGCCCCACTCTACCCTTGCCACTACTGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGCTGTGCAGGCTCGGGGTGTCGGCGCAGAGCATGCTaGTTAAGTGCTGTCTCTGAGCTGAACTGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: GCAGSGCRRRAC*LSAVSELNWAS
Trigger: TGAAGCCCAGTTCAGCTCAGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACACCCCGAGCCTGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp ATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTaGACACGCAGTGCATCAGCCCGGTTGGTGCAGTAC +
Preference number: 3 (lower is better)
Translates to: MKARASRCRVSW*TRSASARLVQY
Trigger: GTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp CCACACTGCTCACACATGAAAGCCCGTGCTTCTCGATaGCGGGTCTCCTGGTGCACACGCAGTGCATCAGCC +
Preference number: 3 (lower is better)
Translates to: PHCSHMKARASR*RVSWCTRSASA
Trigger: GGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GAAGGCCTTGCCACACTGCTCACACATGAAAGCCCGTaGTTCTCGATGCCGGGTCTCCTGGTGCACACGCAG +
Preference number: 3 (lower is better)
Translates to: EGLATLLTHESP*FSMPGLLVHTQ
Trigger: CTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTGGCAAGGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GGGTCTCCTGGTGCACACGCAGTGCATCAGCCCGGTTaGTGCAGTACTCACACTCGGGACACTGGTATGGCT +
Preference number: 3 (lower is better)
Translates to: GSPGAHAVHQPG*CSTHTRDTGMA
Trigger: AGCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTaGGGGTGGTGGGGTCTTTGCCCACACCCTGGTTTG +
Preference number: 3 (lower is better)
Translates to: WDPPAAHHAGAL*GWWGLCPHPGL
Trigger: CAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTTTTATCCACAGCCTTTaGGGAGTCCTTCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVFIHSL*GVLLGV
Trigger: GACACCCAGAAGGACTCCCAAAAGGCTGTGGATAAA...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCC +
Preference number: 3 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVAAVWL*RCSFRA
Trigger: GGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGTGGGCAGTGGCAAAGTaGCACTCAGGACACTGGTGG +
Preference number: 3 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQWAVAK*HSGHWW
Trigger: CCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCA...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGGCAGGTGGAGTTGTCTaGAAGGTTCCTACCCAGTTG +
Preference number: 3 (lower is better)
Translates to: AQASSPAESTVAHIAHIGAGGVV*KVPTQL
Trigger: CAACTGGGTAGGAACCTTCAAGACAACTCCACCTGC...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCAGGCCGCGTTGTTGCTaGAAGCTAGCCCCACACTCG +
Preference number: 3 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPRPRCC*KLAPHS
Trigger: CGAGTGTGGGGCTAGCTTCAAGCAACAACGCGGCCT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCC +
Preference number: 3 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVSPLLL*NQNCIP
Trigger: GGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCT...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp ATCTGCATCCAGGAAGGCCTGGAGGGGGATGAGTCCTaGGGTGGGCATTTCACGGGAAGGGTTGGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: ICIQEGLEGDES*GGHFTGRVGVL
Trigger: CAGCACACCAACCCTTCCCGTGAAATGCCCACCTCAGGACTCATCCCCCTCCAGGCCTTCCTGGATGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp TCCTCCTGCCCCTTCCAGGTTACCGCCACATTCACCTaGTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTT +
Preference number: 3 (lower is better)
Translates to: SSCPFQVTATFT*CPKMASASAQL
Trigger: AAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTGGCGGTAACCTGGAAGGGGCAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp ACCCCAGCTCTGGCTGCCTTCCTAATGCTGTCCTCCTaGCCCTTCCAGGTTACCGCCACATTCACCTGCTGT +
Preference number: 3 (lower is better)
Translates to: TPALAAFLMLSS*PFQVTATFTCC
Trigger: ACAGCAGGTGAATGTGGCGGTAACCTGGAAGGGGCAGGAGGACAGCATTAGGAAGGCAGCCAGAGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp CTTCAGGTGCTTAATGAAGGCCTTGCGGTCGGGTGCTaGATAGCTGCAGCCCTCCTGAAAGCAGCGAAGGGG +
Preference number: 3 (lower is better)
Translates to: LQVLNEGLAVGC*IAAALLKAAKG
Trigger: CCCCTTCGCTGCTTTCAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCCTTCATTAAGCACCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp ACATCAGAGACTTGCCCTGATGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGTGACAGCGATAGGAGC +
Preference number: 3 (lower is better)
Translates to: TSETCPDAAACG*SADQPGDSDRS
Trigger: GCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp AGAGGGCACAGTGGAACTCACGGAGGCGGGTATGCTTaGAGTTCTCATGGCTCAGCACAGCCTGCTTGTGGC +
Preference number: 3 (lower is better)
Translates to: RGHSGTHGGGYA*SSHGSAQPACG
Trigger: GCCACAAGCAGGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GTTTCGAGTTGGTACCAAACGTCTGGGGGCAAGAGCTaGAGGGGATGCGGCCAATGCCTGTGTGTCGGGACT +
Preference number: 3 (lower is better)
Translates to: VSSWYQTSGGKS*RGCGQCLCVGT
Trigger: AGTCCCGACACACAGGCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAACTCGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTaGACACATAGGGTTTGGCCTCACTGTGCTTGCGAA +
Preference number: 3 (lower is better)
Translates to: GQQPSGKHGGTH*THRVWPHCACE
Trigger: TTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CTCCTGTCTTCCAGTGTTGACCTCCTCACTCATCTCTaGCAGGGCCTGGTCCAAGCTGGGGTCCACCACAGT +
Preference number: 3 (lower is better)
Translates to: LLSSSVDLLTHL*QGLVQAGVHHS
Trigger: ACTGTGGTGGACCCCAGCTTGGACCAGGCCCTGCCAGAGATGAGTGAGGAGGTCAACACTGGAAGACAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GCTGAACTGGGCTTCACACTGGGAGCAGGCAAAGGCTaGGGTGCCTTGGTGGCAGCTGTTGACATGACGAGT +
Preference number: 3 (lower is better)
Translates to: AELGFTLGAGKG*GALVAAVDMTS
Trigger: ACTCGTCATGTCAACAGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TTGCCCACACCCTGGTTTGGGTCGGCTTGGTCAGGGTaGTGCCTGCGTACGTGCTTGACCACCTGGAACTTT +
Preference number: 3 (lower is better)
Translates to: LPTPWFGSAWSG*CLRTCLTTWNF
Trigger: AAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTG +
Preference number: 3 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPRMSTL*WAVAKL
Trigger: CAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGAAGGTTCCTACCCAGTaGTTAGGAGCCTCCTCTAAG +
Preference number: 3 (lower is better)
Translates to: AQASSPAESTVAHIAHIGKVPTQ*LGASSK
Trigger: CTTAGAGGAGGCTCCTAACAACTGGGTAGGAACCTT...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTG +
Preference number: 3 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPRSRWV*SLLLLV
Trigger: CACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGTGTCTCCTTAGGGCCTaGAGTAATGACTCTGACTCA +
Preference number: 3 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVCLLRA*SNDSDS
Trigger: TGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACA...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp CTCCTTCAGGTGCTTAATGAAGGCCTTGCGGTCGGGTaGTGCATAGCTGCAGCCCTCCTGAAAGCAGCGAAG +
Preference number: 3 (lower is better)
Translates to: LLQVLNEGLAVG*CIAAALLKAAK
Trigger: CTTCGCTGCTTTCAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCCTTCATTAAGCACCTGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp TGCAGGCGAAGGCACACACCTCACACATCAGAGACTTaGCCTGATGCCGCAGCTTGTGGCTGCTCAGCTGAT +
Preference number: 3 (lower is better)
Translates to: CRRRHTPHTSET*PDAAACGCSAD
Trigger: ATCAGCTGAGCAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGATGTGTGAGGTGTGTGCCTTCGCCTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp TCTCCTGGTGCACACGCAGTGCATCAGCCCGGTTGGTaGAGTACTCACACTCGGGACACTGGTATGGCTTCA +
Preference number: 3 (lower is better)
Translates to: SPGAHAVHQPGW*STHTRDTGMAS
Trigger: TGAAGCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp AGTGACTCTTGTGGTGGGCCTCCATGGCTTCGGCTGTaGCAAAGAGCATGGGACATGAGTGATGGCGGCACT +
Preference number: 3 (lower is better)
Translates to: SDSCGGPPWLRL*QRAWDMSDGGT
Trigger: AGTGCCGCCATCACTCATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGGAGGCCCACCACAAGAGTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTaGTGGTCGAAAAGTCACAGAAGGGGCACTGATGGG +
Preference number: 3 (lower is better)
Translates to: CVGTGEPLTGTV*WSKSHRRGTDG
Trigger: CCCATCAGTGCCCCTTCTGTGACTTTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TTAAGTGCTGTCTCTGAGCTGAACTGGGCTTCACACTaGGAGCAGGCAAAGGCTGGGGTGCCTTGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: LSAVSELNWASH*EQAKAGVPWWQ
Trigger: CTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTTCAGCTCAGAGACAGCACTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GGAAAGCACGGTGGCACACATTGCACACATAGGGTTTaGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCA +
Preference number: 3 (lower is better)
Translates to: GKHGGTHCTHRV*PHCACEGGCAA
Trigger: TGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTGCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CACATCTCAGACCATACCCTCTTCCTATACAGGAGGTaGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGG +
Preference number: 3 (lower is better)
Translates to: HISDHTLFLYRR*GRLSALRSSVG
Trigger: CCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCTTTATCCACAGCCTTTaGGGAGTCCTTCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: RSASARLVQYSHSGHWYGFIHSL*GVLLGV
Trigger: GACACCCAGAAGGACTCCCAAAAGGCTGTGGATAAA...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTG +
Preference number: 3 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLRSRWV*SLLLLV
Trigger: CACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCG...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCGGAATAGGTGCTTATaGGAACAAGCAAAATCACAG +
Preference number: 3 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPRNRCL*EQAKSQ
Trigger: CTGTGATTTTGCTTGTTCCAATAAGCACCTATTCCG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACACTAAGGATGGAGGATTaGTGGAGGGCTCAGACACTG +
Preference number: 3 (lower is better)
Translates to: LLQQVGAEAALLLEASPTLRMED*WRAQTL
Trigger: CAGTGTCTGAGCCCTCCACAAATCCTCCATCCTTAG...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTGTCTCCTTAGGGCCTaGAGTAATGACTCTGACTCA +
Preference number: 3 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGCLLRA*SNDSDS
Trigger: TGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp AGCACGGCAGGAGACCAACTATGTGGAGAACAATGGTaGGAAACTGGCAGTGCTGGGGAGGTGGGGGTAGGA +
Preference number: 3 (lower is better)
Translates to: STAGDQLCGEQW*ETGSAGEVGVG
Trigger: TCCTACCCCCACCTCCCCAGCACTGCCAGTTTCTCACCATTGTTCTCCACATAGTTGGTCTCCTGCCGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp TTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTaGGTCCCTTCTCTTGTCCCGGCAGGTGAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: LSDCGPGSYFQA*VPSLVPAGEAG
Trigger: TCCTGCCTCACCTGCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp GGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCCTCTTCCTATACAGGA +
Preference number: 3 (lower is better)
Translates to: GSELLRLALVPV*TSQTIPSSYTG
Trigger: TCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
3UTR GCA 72 bp TGGCAAAGGGGCAGAAGGTGCAGCGCAGCTCTTCACTaGCAGGGTGGCCCTGCTTCTTGTGTTTACGGAATA +
Preference number: 3 (lower is better)
Translates to: WQRGRRCSAALH*QGGPASCVYGI
Trigger: TATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GGGCAGAAGGTGCAGCGCAGCTCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTACGGAATAGGTGCTTA +
Preference number: 3 (lower is better)
Translates to: GQKVQRSSSLPG*PCFLCLRNRCL
Trigger: TAAGCACCTATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGAGCTGCGCTGCACCTTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp AGTTTCCTGCAGGAGGGACTGGGGAACCAGAGACTGTaGCAAGAGGCTCTTCTGTTTCTTCTGGCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: SFLQEGLGNQRL*QEALLFLLAPW
Trigger: CCAGGGAGCCAGAAGAAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCCCAGTCCCTCCTGCAGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CATGTACCCTTAACCGGTGCAAGCGCAGTTTCGAGTTaGTACCAAACGTCTGGGGGCAAGAGCTGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: HVPLTGASAVSS*YQTSGGKSCRG
Trigger: TCCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp AGAGCATGCTGCTTAAGTGCTGTCTCTGAGCTGAACTaGGCTTCACACTGGGAGCAGGCAAAGGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: RACCLSAVSELN*ASHWEQAKAGV
Trigger: CACCCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTTCAGCTCAGAGACAGCACTTAAGCAGCATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGTGCAGACTGCAGGGCTaGAAATGGACATCTGTGATG +
Preference number: 3 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGCRLQG*KWTSVM
Trigger: CATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCA...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CAA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACAGCTCATACTTCCGCTaGCAGGCGAAGGCACACACC +
Preference number: 3 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNSSYFR*QAKAHT
Trigger: GGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCT...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAACACCAATGCCTCTGCTaGTTCTTTGTCCTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKHQCLC*FFVLSP
Trigger: AGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTG...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCC +
Preference number: 3 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVSPLLL*NQNCIP
Trigger: GGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCT...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp CAGACCGCCTTTATTCCCATTCCCACCCCCAGGTTGTaGCGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTC +
Preference number: 3 (lower is better)
Translates to: QTAFIPIPTPRL*RARCFVRLSVV
Trigger: GACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGAATGGGAATAAAGGCGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp GGGGCTTCTCACCCGTATGTAGAAGCATGTGTCGGATaGGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACT +
Preference number: 3 (lower is better)
Translates to: GASHPYVEACVG*APSCGQWQSCT
Trigger: AGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCGACACATGCTTCTACATACGGGTGAGAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp GAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTaGAACTTGCCCTGCTCAAAGCGGTGCTTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: ESREQRNGQELQ*NLPCSKRCFFR
Trigger: CCTGAAGAAGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGGAAGCCATGTGCTTCTGCAGCTCATACTTCCGCTTaGAGGCGAAGGCACACACCTCACACATCAGAGACT +
Preference number: 3 (lower is better)
Translates to: GKPCASAAHTSA*RRRHTPHTSET
Trigger: AGTCTCTGATGTGTGAGGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTaGCCTGCTCAAAGCGGTGCTTCTTCAGGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: GNKGMGRSCSET*PAQSGASSGPL
Trigger: CAGAGGCCCTGAAGAAGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp AGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGGGCAGAAGGTGCAGCG +
Preference number: 3 (lower is better)
Translates to: SMHLAYMILVSH*VEGGKGAEGAA
Trigger: CGCTGCACCTTCTGCCCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CCACACTCAGGGCACAGGTACTTCCGTTCCTCCTTGTaGATCCGCATGTGGTACTTGAGACGAGAGGGATCA +
Preference number: 3 (lower is better)
Translates to: PHSGHRYFRSSL*IRMWYLRREGS
Trigger: TGATCCCTCTCGTCTCAAGTACCACATGCGGATCCACAAGGAGGAACGGAAGTACCTGTGCCCTGAGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTaGTATGGCTTCAGTCCTGTATGCTTGGTCATGTGG +
Preference number: 3 (lower is better)
Translates to: SARLVQYSHSGH*YGFSPVCLVMW
Trigger: CCACATGACCAAGCATACAGGACTGAAGCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCC +
Preference number: 3 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKAAVWL*RCSFRA
Trigger: GGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCCACCAATGCCTCTGCTaGTTCTTTGTCCTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLHQCLC*FFVLSP
Trigger: AGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTG...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGGTGCTGAGGCCGCGTaGTTGCTTGAAGCTAGCCCC +
Preference number: 3 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKGAEAA*LLEASP
Trigger: GGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp GGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGCTaGAGCCAGACTTCCTGCGTGATATCCAGAGTTCTT +
Preference number: 3 (lower is better)
Translates to: GISARMAAVAMC*SQTSCVISRVL
Trigger: AAGAACTCTGGATATCACGCAGGAAGTCTGGCTTCAGCACATAGCCACAGCCGCCATTCTGGCGGAAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp GGGCCTTGCGTTTATGGAACAAGAGTGTGGTGTTGCTaGAGGTGCGGTAGTCACAGAGGGCACAGTGGAACT +
Preference number: 3 (lower is better)
Translates to: GPCVYGTRVWCC*RCGSHRGHSGT
Trigger: AGTTCCACTGTGCCCTCTGTGACTACCGCACCTTCAGCAACACCACACTCTTGTTCCATAAACGCAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp TGGGTGAATCTGGTCTGGGCAAGCCCTTGTTCTTTCTaGGTAGAACAGGGCACTTCTTCAGCAGGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: WVNLVWASPCSF*VEQGTSSAGGC
Trigger: GCACCCACCTGCTGAAGAAGTGCCCTGTTCTACTCAGAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp GACCCCAGGACTGTACTACGACTCTTAAGAGAACACTaGACAGCACTCAAAGTCCCCCACTGGACTGCTTCC +
Preference number: 3 (lower is better)
Translates to: DPRTVLRLLREH*TALKVPHWTAS
Trigger: GGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp AATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTaGATGCAACAAGGTGAGCCAGCCCCTTTGGCCCCT +
Preference number: 3 (lower is better)
Translates to: NDFIGQYTLPWT*MQQGEPAPLAP
Trigger: AGGGGCCAAAGGGGCTGGCTCACCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp AATATCTTCATGCATGCTGGCCATGTGGCGGTTGAGTaGATTCCTCTCCACCGCACTGTAGTGGCACAGTGG +
Preference number: 3 (lower is better)
Translates to: NIFMHAGHVAVE*IPLHRTVVAQW
Trigger: CCACTGTGCCACTACAGTGCGGTGGAGAGGAATGCACTCAACCGCCACATGGCCAGCATGCATGAAGATATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTaGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTC +
Preference number: 3 (lower is better)
Translates to: ARCFVRLSVVRL*PRLLFPSLSPF
Trigger: GAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp GTATGTAGAAGCATGTGTCGGATGAGCACCCTCTTGTaGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGG +
Preference number: 3 (lower is better)
Translates to: VCRSMCRMSTLL*AVAKLHSGHWW
Trigger: CCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCGACACATGCTTCTACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGGGACACATATGGGTCTaGAAGAGGGACTCGGTGCCA +
Preference number: 3 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVGHIWV*KRDSVP
Trigger: TGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCC...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp CTGGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTaGACTTGCCATGCTGCGTTTTGTGGTAATGGATTA +
Preference number: 3 (lower is better)
Translates to: LGADTMFPGAGA*TCHAAFCGNGL
Trigger: TAATCCATTACCACAAAACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp GGTACCGTGCACCCAGTACCTATCTTCTTAACTCCCTaGAAGAGGGGCTGGAAGGCCTCCATGGTGAATCTT +
Preference number: 3 (lower is better)
Translates to: GTVHPVPIFLTP*KRGWKASMVNL
Trigger: AAGATTCACCATGGAGGCCTTCCAGCCCCTCTTTCAGGGAGTTAAGAAGATAGGTACTGGGTGCACGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp TGGAAATATCTTCATGCATGCTGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCGCACTGTAGTGGCACA +
Preference number: 3 (lower is better)
Translates to: WKYLHACWPCGG*VHSSPPHCSGT
Trigger: TGTGCCACTACAGTGCGGTGGAGAGGAATGCACTCAACCGCCACATGGCCAGCATGCATGAAGATATTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp TTAATCCATACTGGGGGCAGACACTATGTTTCCGGGTaGTGGTGCCTGAACTTGCCATGCTGCGTTTTGTGG +
Preference number: 3 (lower is better)
Translates to: LIHTGGRHYVSG*WCLNLPCCVLW
Trigger: CCACAAAACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCCAGTATGGATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp CGCCTTTATTCCCATTCCCACCCCCAGGTTGTGACGTaGCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATT +
Preference number: 3 (lower is better)
Translates to: RLYSHSHPQVVT*PLFCPSICCQI
Trigger: AATCTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGAATGGGAATAAAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp AAGGTGCAGCGCAGCTCTTCACTGCCAGGGTGGCCCTaGTTCTTGTGTTTACGGAATAGGTGCTTATTGGAA +
Preference number: 3 (lower is better)
Translates to: KVQRSSSLPGWP*FLCLRNRCLLE
Trigger: TTCCAATAAGCACCTATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGAGCTGCGCTGCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp TCTTCTGTCGGTTCTTGGTGCTGTAAGCACAATCGGTaGACTTGTAGAGACGAGTGCCCCCATGCCCTTTCA +
Preference number: 3 (lower is better)
Translates to: SSVGSWCCKHNR*TCRDECPHALS
Trigger: TGAAAGGGCATGGGGGCACTCGTCTCTACAAGTGCACCGATTGTGCTTACAGCACCAAGAACCGACAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTaGACCTGCATGCAACAAGGTGAGCCAGCCCCTTTG +
Preference number: 3 (lower is better)
Translates to: SRNDFIGQYTLP*TCMQQGEPAPL
Trigger: CAAAGGGGCTGGCTCACCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp GTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTaGCGTTCGTCTAGACACAGCACGGCAGGAGACCAA +
Preference number: 3 (lower is better)
Translates to: VHCGSTGESADL*RSSRHSTAGDQ
Trigger: TTGGTCTCCTGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp CGCTTCTTAAAGCAGCGCTTACACTCTGGACACATATaGGTCTTGAAGAGGGACTCGGTGCCAGAGACCACA +
Preference number: 3 (lower is better)
Translates to: RFLKQRLHSGHI*VLKRDSVPETT
Trigger: TGTGGTCTCTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGCTTTAAGAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CAGATGAGTCCGCTTCTTAAAGCAGCGCTTACACTCTaGACACATATGGGTCTTGAAGAGGGACTCGGTGCC +
Preference number: 3 (lower is better)
Translates to: QMSPLLKAALTL*THMGLEEGLGA
Trigger: GGCACCGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGCTTTAAGAAGCGGACTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp ACCAGAGACTGTGGCAAGAGGCTCTTCTGTTTCTTCTaGCTCCCTGGGAAGCTCCAAAGGAGCATCTTTTGG +
Preference number: 3 (lower is better)
Translates to: TRDCGKRLFCFF*LPGKLQRSIFW
Trigger: CCAAAAGATGCTCCTTTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAGAGCCTCTTGCCACAGTCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGATGATGAGCTAAAGTaGCTTCTAGGAGGAGGCTTA +
Preference number: 3 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQDDELK*LLGGGL
Trigger: TAAGCCTCCTCCTAGAAGCAACTTTAGCTCATCATC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CAA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACGGTCTGGGCAAGCCCTaGTTCTTTCTGAGTAGAACA +
Preference number: 3 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNGLGKP*FFLSRT
Trigger: TGTTCTACTCAGAAAGAACAAGGGCTTGCCCAGACC...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCTTCAGTCCTGTATGCTaGGTCATGTGGTATTTCAGC +
Preference number: 3 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVFSPVC*VMWYFS
Trigger: GCTGAAATACCACATGACCAAGCATACAGGACTGAA...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTTGTTTTCATAAGCCTTaGGTATCTTTCCTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVCFHKP*VSFLPF
Trigger: AAAGGGCAGGAAAGATACCAAAGGCTTATGAAAACA...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp CTTGCTCTTCTTTTCTCCTGGGGCCCTCAGTGGCCATaGATATGCAGACTGCAGGGCTTGAAATGGACATCT +
Preference number: 3 (lower is better)
Translates to: LALLFSWGPQWP*ICRLQGLKWTS
Trigger: AGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAGAAAAGAAGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp GGAGCACTACCACTTCTACGAGATATCATCTTTCTCTaGAACCAAGGCCAAGCGCCTCATCAAGGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: GALPLLRDIIFL*NQGQAPHQGGW
Trigger: CCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp CCTCTGCTTGTTCTTTGTCCTGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAGGTAATGGGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: PLLVLCPVSLGP*VMTLTQVMGAR
Trigger: CCTTGCCCCCATTACCTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp GTCCTGTATGCTTGGTCATGTGGTATTTCAGCTGGTTaGCCCACTTGCACTTGTAGCCACACTCAGGGCACA +
Preference number: 3 (lower is better)
Translates to: VLYAWSCGISAG*PTCTCSHTQGT
Trigger: TGTGCCCTGAGTGTGGCTACAAGTGCAAGTGGGTCAACCAGCTGAAATACCACATGACCAAGCATACAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp CCAGGGTGGCCCTGCTTCTTGTGTTTACGGAATAGGTaGTTATTGGAACAAGCAAAATCACAGTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: PGWPCFLCLRNR*LLEQAKSQWGQ
Trigger: CTGCCCCCACTGTGATTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACACAAGAAGCAGGGCCACCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR GCA 72 bp TGCTGTAAGCACAATCGGTGCACTTGTAGAGACGAGTaGCCCCATGCCCTTTCACATGGTGATCTAGTACCA +
Preference number: 3 (lower is better)
Translates to: CCKHNRCTCRDE*PHALSHGDLVP
Trigger: TGGTACTAGATCACCATGTGAAAGGGCATGGGGGCACTCGTCTCTACAAGTGCACCGATTGTGCTTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp GTCATTGTTGGGCAAGAAGGGGAGGTACAAGGGTTGTaGGGACATCTGGGTAGTCAGGTGAGACAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: VIVGQEGEVQGL*GHLGSQVRQGK
Trigger: TTTTCCTTGTCTCACCTGACTACCCAGATGTCCCCACAACCCTTGTACCTCCCCTTCTTGCCCAACAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp CCTTTTACAGGCAATGAGTTTGTGCAGCACAATACTTaGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: PFTGNEFVQHNT*QLSRVYPSGLR
Trigger: CCTCAGGCCGCTGGGATACACACGGCTTAACTGCCAAGTATTGTGCTGCACAAACTCATTGCCTGTAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp GGCAGACAGGACAGGCATAGGTGTCTGAGTAGAAGTTaGAAATATCTTCATGCATGCTGGCCATGTGGCGGT +
Preference number: 3 (lower is better)
Translates to: GRQDRHRCLSRS*KYLHACWPCGG
Trigger: ACCGCCACATGGCCAGCATGCATGAAGATATTTCCAACTTCTACTCAGACACCTATGCCTGTCCTGTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCCTGTGTGAAGGCAGGTaGCAACTAGAAATTCAGAGG +
Preference number: 3 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPALCEGR*QLEIQR
Trigger: CCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAG...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CAA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACAAATCAAGCTTTGGATaGTGCATTCCTAGGCACAAA +
Preference number: 3 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDKSSFG*CIPRHK
Trigger: TTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTT...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CAA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCTTCAGTCCTGTATGCTaGGTCATGTGGTATTTCAGC +
Preference number: 3 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFFSPVC*VMWYFS
Trigger: GCTGAAATACCACATGACCAAGCATACAGGACTGAA...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR TCA 72 bp AGAAACTCCTTAGAGCAGACAAGGGCAGAGGAGTTATaGATAGTGGCTCAAGGGTCTAGGGGCAGGAAAGCT +
Preference number: 3 (lower is better)
Translates to: RNSLEQTRAEEL*IVAQGSRGRKA
Trigger: AGCTTTCCTGCCCCTAGACCCTTGAGCCACTATTCATAACTCCTCTGCCCTTGTCTGCTCTAAGGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTaGTTCCTCCTTAGCCCCACTGGTATAAATACATCT +
Preference number: 3 (lower is better)
Translates to: RTLHSTQSPPLD*FLLSPTGINTS
Trigger: AGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp AAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTaGAAGCGCAGTTTCGAGTTGGTACCAAACGTCTGG +
Preference number: 3 (lower is better)
Translates to: KWVGVLSCTLNR*KRSFELVPNVW
Trigger: CCAGACGTTTGGTACCAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp TTCTTTCTGTCCACCAACTCAGGTTTTAATCCATACTaGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCT +
Preference number: 3 (lower is better)
Translates to: FFLSTNSGFNPY*GQTLCFRVLVP
Trigger: AGGCACCAGCACCCGGAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CAA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCATCAGTACACCCTGCCTaGGACCTGCATGCAACAAGG +
Preference number: 3 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPSVHPA*DLHATR
Trigger: CCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTGA...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp CATAGCCACATTCAGTGCACATGTAATCCTTGGTGTTaGAGTGGGTCAGCATGTGCTTGGATAGGTAGCTCA +
Preference number: 3 (lower is better)
Translates to: HSHIQCTCNPWC*SGSACAWIGSS
Trigger: TGAGCTACCTATCCAAGCACATGCTGACCCACTCCAACACCAAGGATTACATGTGCACTGAATGTGGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR-3UTR CAA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTCTTTCCATAGTATCCTaGTGCTTTAACACCTTAGTG +
Preference number: 3 (lower is better)
Translates to: HIHLLSKDGISLRPASIFLSIVS*CFNTLV
Trigger: CACTAAGGTGTTAAAGCACAAGGATACTATGGAAAG...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp TCTTGTGTCCAGCCCTCTCTTCCCTGGTTATCTACTTaGAGTCTGTCTCATTCCGCAGCTTCACACATTCAA +
Preference number: 3 (lower is better)
Translates to: SCVQPSLPWLST*SLSHSAASHIQ
Trigger: TTGAATGTGTGAAGCTGCGGAATGAGACAGACTTCAAGTAGATAACCAGGGAAGAGAGGGCTGGACACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp GGTAGAGAAAGAGGTTCCCAGGAGACCTCTTGCATGTaGTACATAGGAAGGACACAGAGTATGGCTTTTAAG +
Preference number: 3 (lower is better)
Translates to: GRERGSQETSCM*YIGRTQSMAFK
Trigger: CTTAAAAGCCATACTCTGTGTCCTTCCTATGTAGCACATGCAAGAGGTCTCCTGGGAACCTCTTTCTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp GATGTCATGGCGAAGGTAGCCACTATAGTCACAAAGTaGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCT +
Preference number: 3 (lower is better)
Translates to: DVMAKVATIVTK*TEVGRCFVMYP
Trigger: AGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTGTGACTATAGTGGCTACCTTCGCCATGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CCA 72 bp CCGGATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTaGAGCCAGCTGCCTAGCTTCAAACCACAACTTCCT +
Preference number: 3 (lower is better)
Translates to: PDSLLTVSSFSF*SQLPSFKPQLP
Trigger: AGGAAGTTGTGGTTTGAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR TCA 72 bp GAGTGGGTAAAATCCAGATCTTATAGCCAGGGACTTTaGTGGAGTGATGGTGAAGAAACTGAGAACTTGCAG +
Preference number: 3 (lower is better)
Translates to: EWVKSRSYSQGL*WSDGEETENLQ
Trigger: CTGCAAGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGGATTTTACCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR CCA 72 bp AGAATCCTGGCTCTTCACTTAAAAGCTCCAGTGACCTaGGCAAATTACTTGCTTACTCTGAGCCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: RILALHLKAPVT*ANYLLTLSLFP
Trigger: AGGAAAAAGGCTCAGAGTAAGCAAGTAATTTGCCCAGGTCACTGGAGCTTTTAAGTGAAGAGCCAGGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR GCA 72 bp AATATAAAGTTCTTACAATTCCTGGCACACAGGAAGTaGTATAAAAGAGGCTGGCTGGGAGCGATAGCTTAC +
Preference number: 3 (lower is better)
Translates to: NIKFLQFLAHRK*YKRGWLGAIAY
Trigger: GTAAGCTATCGCTCCCAGCCAGCCTCTTTTATAGCACTTCCTGTGTGCCAGGAATTGTAAGAACTTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp CTTGCCATGCTGCGTTTTGTGGTAATGGATTATGACTaGAAATCCCGAAATGACTTTATTGGTCAGTACACC +
Preference number: 3 (lower is better)
Translates to: LAMLRFVVMDYD*KSRNDFIGQYT
Trigger: GGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGTCATAATCCATTACCACAAAACGCAGCATGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CCA 72 bp GGTATAAATACATCTCTCTCCAATTTGGCTTCAATATaGTCTGTCATTGTTGGGCAAGAAGGGGAGGTACAA +
Preference number: 3 (lower is better)
Translates to: GINTSLSNLASI*SVIVGQEGEVQ
Trigger: TTGTACCTCCCCTTCTTGCCCAACAATGACAGACCATATTGAAGCCAAATTGGAGAGAGATGTATTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR-3UTR CAA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGAAGAAACTGAGAACTaGCAGGTTAAAAACGCAATG +
Preference number: 3 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNEETEN*QVKNAM
Trigger: CATTGCGTTTTTAACCTGCAAGTTCTCAGTTTCTTC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
3UTR TCA 72 bp GCTTACTCTGAGCCTTTTTCCTTACCTGTAAAATGCTaGTTGCCATCTAGATTAAATGAGAACACAAGAAAA +
Preference number: 3 (lower is better)
Translates to: AYSEPFSLPVKC*LPSRLNENTRK
Trigger: TTTTCTTGTGTTCTCATTTAATCTAGATGGCAATCAGCATTTTACAGGTAAGGAAAAAGGCTCAGAGTAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGGGCTTCACCCCCTCGTaGTTGAGCCGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPGFTPS*LSRRCC
Trigger: GCAGCACCGGCGGCTCAAGCACGAGGGGGTGAAGCC...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp CCCACACTCGGGGCACAGCAGGGGCTCTCGGCGGCCTaGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PTLGAQQGLSAA*APSPGVQIQGL
Trigger: AAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCCCTGCTGTGCCCCGAGTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGGGGGGTGTTGGGCCCTaGATGGCCCCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AQASSPAESTVAHIAHIGGGVGP*MAPSGS
Trigger: GGAGCCAGAAGGGGCCATGCAGGGCCCAACACCCCC...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
67% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCCCACGGGCTGGGGCTaGAGTGGGGTGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGPTGWG*SGVPPL
Trigger: AAGCGGAGGCACCCCACTGCAGCCCCAGCCCGTGGG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGCTCTCGGCGGCCTTaGCACCCAGTCCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVGSRRP*HPVLEC
Trigger: GCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCGGCGGTCGGTGTGGGTaGGGGCATGATGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGGGRCG*GHDGAG
Trigger: GCCTGCGCCATCATGCCCTCACCCACACCGACCGCC...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGGGGGCTGCAGTGGGGTaGCTCCGCTTCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAGAAVG*LRFWWS
Trigger: GCTCCACCAGAAGCGGAGGCACCCCACTGCAGCCCC...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVVARVE*GRCARV
Trigger: CACCCTGGCACACCGGCCCCACTCTACCCTTGCCAC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGGTGTTGGGCCCTGCATaGCCCCTTCTGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQVLGPA*PLLAPG
Trigger: GCCAGGAGCCAGAAGGGGCCATGCAGGGCCCAACAC...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCGGCAAAAGAAGGGGTaGCGGTCGGTGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPRQKKG*RSVWVR
Trigger: CCTCACCCACACCGACCGCCACCCCTTCTTTTGCCG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp CGTGACCTGGCCCCTCAGGTCGGGCTGACAGCTGGTTaGAGGGCTCTGAATCTGGTGGGGGTGTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RDLAPQVGLTAG*RALNLVGVLGP
Trigger: AGGGCCCAACACCCCCACCAGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACCTGAGGGGCCAGGTCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCCCTTTAGGGCCTGGCTaGGGCGGAATTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTPLGPG*GGIPHG
Trigger: GCCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGG...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCTGGCTCTGCTGCGGCTaGTGCCGTGTGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGWLCCG*CRVALE
Trigger: CTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCA...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTTTCTGGCTCCTGGCTTaGATAGCGGAGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVFWLLA*IAELPG
Trigger: GCCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAA...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGTCTGGGGGCAAGAGCTaGAGGGGATGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQSGGKS*RGCGQC
Trigger: GCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGA...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGGTGTCCTCTGAGGCCTaGGTACCTGGGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPVSSEA*VPGSTG
Trigger: ACCTGTGCTCCCAGGTACCCAGGCCTCAGAGGACAC...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTCATGCAGGTGCACTGTaGGGGTGGTGGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVHAGAL*GWWGLC
Trigger: GCAAAGACCCCACCACCCCCACAGTGCACCTGCATG...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp GGTGGGGTCTTTGCCCACACCCTGGTTTGGGTCGGCTaGGTCAGGGTGGTGCCTGCGTACGTGCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: GGVFAHTLVWVG*VRVVPAYVLDH
Trigger: GTGGTCAAGCACGTACGCAGGCACCACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGTGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: AQASSPAESTVAHIAHIGWPCGG*VHSSPP
Trigger: CGGTGGAGAGGAATGCACTCAACCGCCACATGGCCA...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCCTTTAGGGCCTGGCTaGGGCGGAATTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGPLGPG*GGIPHG
Trigger: GCCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGGAGCACTGGTTGCACTaGTACCTGAGGTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPEHWLH*YLRSPA
Trigger: TGCAGGGGACCTCAGGTATCAGTGCAACCAGTGCTC...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTATCAGAGACTTGCCCTaGTGCCGCAGCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVIRDLP*CRSLWL
Trigger: CAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGAT...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCACAGTCCCAGGTTCGTaGCCTGGCCCCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGTVPGS*PGPSGR
Trigger: CCGACCTGAGGGGCCAGGTCACGAACCTGGGACTGT...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGACTTTCTGTGTCCTCTaGGGCCTGGGTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPTFCVL*GLGTWE
Trigger: CTCCCAGGTACCCAGGCCTCAGAGGACACAGAAAGT...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCGTGTGTCGGGACTGGTaGGCCTCTAACCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTVCRDW*ASNRYR
Trigger: ACGGTACCGGTTAGAGGCTCACCAGTCCCGACACAC...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGGCGGTCGGTGTGGGTaGGGGCATGATGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPGGRCG*GHDGAG
Trigger: GCCTGCGCCATCATGCCCTCACCCACACCGACCGCC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVVWLLR*SFRAWL
Trigger: CAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACAC...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCATGGGGAGCCTCACTaGCCTCCTGTCTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPHGEPH*PPVFQC
Trigger: ACACTGGAAGACAGGAGGGCAGTGAGGCTCCCCATG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCCCACGGGCTGGGGCTaGAGTGGGGTGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVPTGWG*SGVPPL
Trigger: AAGCGGAGGCACCCCACTGCAGCCCCAGCCCGTGGG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCTTGAGCCGCCGGTGCTaGTGCATGCAACGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGLSRRC*CMQRLC
Trigger: ACAGAGCCGTTGCATGCAGCAGCACCGGCGGCTCAA...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAGGCTTCACCCCCTCGTaGTTGAGCCGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTGFTPS*LSRRCC
Trigger: GCAGCACCGGCGGCTCAAGCACGAGGGGGTGAAGCC...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCAGGGGATGCGGCCAATaGCTGTGTGTCGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGRGCGQ*LCVGTG
Trigger: ACCAGTCCCGACACACAGGCATTGGCCGCATCCCCT...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCATCAGCCCGGTTGGTaGAGTACTCACACTCGGGAC +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPHQPGW*STHTRD
Trigger: GTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGTGCACATCATGCAGGTaGACTGTGGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AQASSPAESTVAHIAHIGCTSCR*TVGVVG
Trigger: CCCCACCACCCCCACAGTGCACCTGCATGATGTGCA...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCTGGCACAGTGGGCAGTaGTGGGCCTTTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTWHSGQ*WAFSPS
Trigger: GCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCA...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGGCGGCTGCTGCCGTGTaGCTCTTGAGGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQAAAAV*LLRCSF
Trigger: AAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGC...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCTCCTCACTCATCTCTaGCAGGGCCTGGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPLLTHL*QGLVQA
Trigger: AGCTTGGACCAGGCCCTGCCAGAGATGAGTGAGGAG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTGACCTCCTCAAGGGGTaGCTCAGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVDLLKG*LSHRLQ
Trigger: CTGGAGTCTGTGACTGAGCCACCCCTTGAGGAGGTC...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCTTGGCACCCAGTCCTaGAGTGCAGATTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPLGTQS*SADSGP
Trigger: AGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAGGGCTGGGGCTGCAGTaGGGTGCCTCCGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTGLGLQ*GASASG
Trigger: ACCAGAAGCGGAGGCACCCCACTGCAGCCCCAGCCC...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGGCTTTTCCCCAGTGTaGATGCGGCTGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVGFSPV*MRLCQV
Trigger: CACCTGGCACAGCCGCATCCACACTGGGGAAAAGCC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGGCCCACACCCTGGTTTaGGTCGGCTTGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAAHTLV*VGLVRV
Trigger: CACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGC...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCAGCATGGGACATGAGTaGTGGCGGCACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGSMGHE*WRHSTA
Trigger: GGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCT...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCGAAGCATGTGTCGGATaGGCACCCTCTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTEACVG*APSCGQ
Trigger: CTGCCCACAAGAGGGTGCTCATCCGACACATGCTTC...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGCAGCCCCGGATCTGGTaGGTCCTCAGAGCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGQPRIW*VLRARS
Trigger: GGAACGGGCTCTGAGGACTCACCAGATCCGGGGCTG...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGGCTGACAGCGGTGGCTaGAATGCTGCTGCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGADSGG*NAAASG
Trigger: ACCGGAGGCAGCAGCATTTCAGCCACCGCTGTCAGC...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGTGCGGCTGTGCCAGGTaGTCTTCTGTCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: AQASSPAESTVAHIAHIGCGCAR*SSVGSW
Trigger: CCAAGAACCGACAGAAGATCACCTGGCACAGCCGCA...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCCTCTGCTGCGGCTGCTaGCGTGTGGCTCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGLCCGC*RVALEV
Trigger: CACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAG...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAGGCCTTGCGGTCGGGTaGTGCATAGCTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKGLAVG*CIAAAL
Trigger: GAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCC...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGCAAAGGGGCAGAAGGTaGAGCGCAGCTCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: AQASSPAESTVAHIAHIGQRGRR*SAALHC
Trigger: GCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTTTG...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCCCCTGCTCAAAGCGGTaGTTCTTCAGGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTPCSKR*FFRASV
Trigger: CACAGAGGCCCTGAAGAAGCACCGCTTTGAGCAGGG...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCGGGGCTGCAGTGGGGTaGCTCCGCTTCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGGAAVG*LRFWWS
Trigger: GCTCCACCAGAAGCGGAGGCACCCCACTGCAGCCCC...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGGGGCTGCAGTGGGGTaGCTCCGCTTCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVGAAVG*LRFWWS
Trigger: GCTCCACCAGAAGCGGAGGCACCCCACTGCAGCCCC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGGCCGGTGCTGCTGCATaGAACGGCTCTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQAGAAA*NGSVYR
Trigger: CCTGTAAACAGAGCCGTTGCATGCAGCAGCACCGGC...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGTGCTTGAGCCGCCGGTaGTGCTGCATGCAACGGCTC +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGCLSRR*CCMQRL
Trigger: GAGCCGTTGCATGCAGCAGCACCGGCGGCTCAAGCA...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGTGCTGCTGCCTCCGGTaGTCATCCAGAGCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQCCCLR*SSRASR
Trigger: CCGACTGGCTCTGGATGAGCACCGGAGGCAGCAGCA...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGCCCGTGCTTCTCGATaGCGGGTCTCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQARASR*RVSWCT
Trigger: TGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGTCCAGCTGCACATCATaGAGGTGCACTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQSSCTS*RCTVGV
Trigger: CACCCCCACAGTGCACCTGCATGATGTGCAGCTGGA...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCC +
Preference number: 4 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVALVPV*TSQTIP
Trigger: GGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGC...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGTACCAGCAGGCAGCCTaGCTCAGTAGGTATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPYQQAA*LSRYRC
Trigger: GCACCTATACCTACTGAGCCAGGCTGCCTGCTGGTA...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCCATGGCTTCGGCTGTaGCAAAGAGCATGGGACATG +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPPWLRL*QRAWDM
Trigger: CATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCAGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAVARVE*GRCARV
Trigger: CACCCTGGCACACCGGCCCCACTCTACCCTTGCCAC...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCATCTGGTGGGGGTGTTaGGCCCTGCATGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGIWWGC*ALHGPF
Trigger: GAAGGGGCCATGCAGGGCCCAACACCCCCACCAGAT...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGATCTCTGGCAGGGCCTaGTCCAAGCTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGISGRA*SKLGST
Trigger: GGTGGACCCCAGCTTGGACCAGGCCCTGCCAGAGAT...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGGACCTCCTCAAGGGGTaGCTCAGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQDLLKG*LSHRLQ
Trigger: CTGGAGTCTGTGACTGAGCCACCCCTTGAGGAGGTC...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGGCTCGCCCCTCTCCCTaGATCACTACCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAARPSP*ITTICT
Trigger: GGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGC...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGCTTGGCACCCAGTCCTaGAGTGCAGATTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVLGTQS*SADSGP
Trigger: AGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAG...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCGTGTCCTCTGAGGCCTaGGTACCTGGGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGVSSEA*VPGSTG
Trigger: ACCTGTGCTCCCAGGTACCCAGGCCTCAGAGGACAC...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGCAGGGGGCCCTCAGTaGTCTCTGCAGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHMKARASRCRVSWCTRSAGGPQ*SLQESQ
Trigger: CTGGCTCTCCTGCAGAGACCACTGAGGGCCCCCTGC...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCGGTGCACTGTGGGGGTaGTGGGGTCTTTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGGALWG*WGLCPH
Trigger: GTGTGGGCAAAGACCCCACCACCCCCACAGTGCACC...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTTTCCTATACAGGAGGTaGGGCAGGCTTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVFLYRR*GRLSAL
Trigger: GAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAA...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCACCATCGAGAGCTCTaGGGTAGAGTGGCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGHHREL*GRVAWA
Trigger: AGCCCACGCCACTCTACCCCAGAGCTCTCGATGGTG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450765.5
3UTR CAA 72 bp GGTAATGGCTCTGCTGCGGCTGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCCTGGCTGAGGCGGAAT +
Preference number: 4 (lower is better)
Translates to: GNGSAAAAAVWL*RCSFRAWLRRN
Trigger: ATTCCGCCTCAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCATTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp CGGGTCTCCTGGTGCACACGCAGTGCATCAGCCCGGTaGGTGCAGTACTCACACTCGGGACACTGGTATGGC +
Preference number: 4 (lower is better)
Translates to: RVSWCTRSASAR*VQYSHSGHWYG
Trigger: GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCGTGTGCACCAGGAGACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp ACATCATGCAGGTGCACTGTGGGGGTGGTGGGGTCTTaGCCCACACCCTGGTTTGGGTCGGCTTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TSCRCTVGVVGS*PTPWFGSAWSG
Trigger: CCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCCCACAGTGCACCTGCATGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACCCCCACTCCAGCCCTaGAGCCGGAGAAGCACCATC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPPPLQP*SRRSTI
Trigger: GATGGTGCTTCTCCGGCTTCAGGGCTGGAGTGGGGG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000450765.5
CDS-3UTR TCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGCACCATGGCTCCGCTaGTGCTGCCGGAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQAPWLR*CCRKSL
Trigger: CAAACTCTTCCGGCAGCATCAGCGGAGCCATGGTGC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGAGCATGGGACATGAGTaGTGGCGGCACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQSMGHE*WRHSTA
Trigger: GGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCT...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAACAGTCCCAGGTTCGTaGCCTGGCCCCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPTVPGS*PGPSGR
Trigger: CCGACCTGAGGGGCCAGGTCACGAACCTGGGACTGT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCGGGCAGGAGTTGCAGTaGAACTTGCCCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGGQELQ*NLPCSK
Trigger: CTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCC...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCGGCTCTGTTTACAGGTaGAGCCACAGTCCCCACACT +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGGSVYR*SHSPHT
Trigger: AGTGTGGGGACTGTGGCTTCACCTGTAAACAGAGCC...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGTGTGGGTGAGGGCATaGTGGCGCAGGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYVWVRA*WRRPAA
Trigger: GGCTGCTGGCCTGCGCCATCATGCCCTCACCCACAC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAACTCTGCTGCGGCTGCTaGCGTGTGGCTCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKLCCGC*RVALEV
Trigger: CACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAG...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTAAACG*SADQPG
Trigger: ACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGC...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTAAAACG*SADQPG
Trigger: ACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGC...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGCACCCAGTCCTGGAGTaGAGATTCAGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAHPVLE*RFRAFS
Trigger: GGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTG...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCTGGCTGAAATGCTGCTaGCTCCGGTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGWLKCC*LRCSSR
Trigger: TCTGGATGAGCACCGGAGGCAGCAGCATTTCAGCCA...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAGCCCGTGCTTCTCGATaGCGGGTCTCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKARASR*RVSWCT
Trigger: TGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGC...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCGGGTGGTGGGGTCTTTaGCCACACCCTGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGGWWGL*PHPGLG
Trigger: ACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCC...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCCTGGGATCCTCCAGCTaGACATCATGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTLGSSS*TSCRCT
Trigger: AGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAG...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCAGGCGGTTTGTAACCTaGAAGGCTCCAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGRRFVT*KAPDPE
Trigger: CTCTGGGTCTGGAGCCTTCCAGGTTACAAACCGCCT...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGCAGCAGCTCCTGGGATaGAAGGCCCTGAACGGCAGA +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGQQLLG*KALNGR
Trigger: TCTGCCGTTCAGGGCCTTCCATCCCAGGAGCTGCTG...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCCTCCTGGAGGCAGTTTaGGAGCTGGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGLLEAV*ELAAAP
Trigger: AGGAGCTGCTGCCAGCTCCCAAACTGCCTCCAGGAG...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGCTCCTGGAGGCAGTTTaGGAGCTGGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGLLEAV*ELAAAP
Trigger: AGGAGCTGCTGCCAGCTCCCAAACTGCCTCCAGGAG...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGCCCTCTTGTGGGCAGTaGCAAAGTTGCACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQPSCGQ*QSCTQD
Trigger: GTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGG...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGCCGGTGTGCCAGGGTaGTGCTGGGAAGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVAGVPG*CWEAMC
Trigger: GCACATGGCTTCCCAGCACCACCCTGGCACACCGGC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAATCTGGTGGGGGTGTTaGGCCCTGCATGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTIWWGC*ALHGPF
Trigger: GAAGGGGCCATGCAGGGCCCAACACCCCCACCAGAT...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGGGAGGGCTCAGACACTaGCTTTTCCAGAAGGGGATT +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPGGLRH*LFQKGI
Trigger: AATCCCCTTCTGGAAAAGCCAGTGTCTGAGCCCTCC...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCACTTCTTCAGCAGGTaGGTGCTGAGGCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGHFFSR*VLRPRC
Trigger: ACAACGCGGCCTCAGCACCCACCTGCTGAAGAAGTG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTTGGTACCAAACGTCTaGGGGCAAGAGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGLVPNV*GQELQG
Trigger: CCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCAGCGCAGTTTCGAGTTaGTACCAAACGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGSAVSS*YQTSGG
Trigger: GCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCT...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGGGAGCAGGCAAAGGCTaGGGTGCCTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGGAGKG*GALVAA
Trigger: AGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCC...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACGCAGGGGGCCCTCAGTaGTCTCTGCAGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDAGGPQ*SLQESQ
Trigger: CTGGCTCTCCTGCAGAGACCACTGAGGGCCCCCTGC...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGCAGGGGGCCCTCAGTaGTCTCTGCAGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVAGGPQ*SLQESQ
Trigger: CTGGCTCTCCTGCAGAGACCACTGAGGGCCCCCTGC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGCTAGGGAAGGCCTCCTaGCAGGCCCCACACTCAAGC +
Preference number: 4 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGLGKAS*QAPHSS
Trigger: GCTTGAGTGTGGGGCCTGCCAGGAGGCCTTCCCTAG...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGGCTTTTCCCCAGTGTaGATGCGGCTGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQGFSPV*MRLCQV
Trigger: CACCTGGCACAGCCGCATCCACACTGGGGAAAAGCC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGTCTTTGCCCACACCCTaGTTTGGGTCGGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQSLPTP*FGSAWS
Trigger: TGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGA...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCCCCCCACTCCAGCCCTaGAGCCGGAGAAGCACCATC +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIPPLQP*SRRSTI
Trigger: GATGGTGCTTCTCCGGCTTCAGGGCTGGAGTGGGGG...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000450765.5
CDS-3UTR TCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCAGCCAAGGAGGACGCTaGGCCGTCAAGATTAAGAAC +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTSQGGR*AVKIKN
Trigger: GTTCTTAATCTTGACGGCTCAGCGTCCTCCTTGGCT...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGCTACTGGCTGGCTGTaGGTCCAAAAGGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQATGWL*VQKGVC
Trigger: ACAGACCCCCTTTTGGACTCACAGCCAGCCAGTAGC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGAGAGTGTGGTGTTGCTaGAGGTGCGGTAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQRVWCC*RCGSHR
Trigger: TCTGTGACTACCGCACCTTCAGCAACACCACACTCT...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCTCACCCCCTCGTGCTTaGGCCGCCGGTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFSPPRA*AAGAAA
Trigger: TGCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGA...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCGTGTGGGTGAGGGCATaGTGGCGCAGGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFVWVRA*WRRPAA
Trigger: GGCTGCTGGCCTGCGCCATCATGCCCTCACCCACAC...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTGGCTCTGCTGCGGCTaGTGCCGTGTGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVWLCCG*CRVALE
Trigger: CTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCGGCCTTGCGGTCGGGTaGTGCATAGCTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIGLAVG*CIAAAL
Trigger: GAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCC...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGCAAAGGGGCAGAAGGTaGAGCGCAGCTCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQQRGRR*SAALHC
Trigger: GCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTTTG...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGTTCTGGCTCCTGGCTTaGATAGCGGAGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGFWLLA*IAELPG
Trigger: GCCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAA...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGGGAATGGGCAGGAGTTaGAGTGAAACTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQGMGRS*SETCPA
Trigger: AGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCC...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATGCTTGAGCCGCCGGTaGTGCTGCATGCAACGGCTC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPCLSRR*CCMQRL
Trigger: GAGCCGTTGCATGCAGCAGCACCGGCGGCTCAAGCA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCTCTGGGGGCAAGAGCTaGAGGGGATGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVSGGKS*RGCGQC
Trigger: GCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGA...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGTGTACCCTTAACCGGTaGAAGCGCAGTTTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPCTLNR*KRSFEL
Trigger: CAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACA...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGTCTGTCGGTTCTTGGTaGTGTAAGCACAATCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPSVGSW*CKHNRC
Trigger: GCACCGATTGTGCTTACAGCACCAAGAACCGACAGA...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTGCCGGGTCTCCTGGTaGACACGCAGTGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGCRVSW*TRSASA
Trigger: GGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTGCCGGGTCTCCTGGTaGACACGCAGTGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVCRVSW*TRSASA
Trigger: GGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCTGGGATCCTCCAGCTaGACATCATGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGLGSSS*TSCRCT
Trigger: AGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGAGCCGCATCTCTATaGTCGGCCGCGGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDGAASL*SAAAGT
Trigger: CGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCC...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCGTCGCTTCGCTTCTCTaGGCCTCAGCTTTCCTATCT +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTVASLL*ASAFLS
Trigger: AGATAGGAAAGCTGAGGCCCAGAGAAGCGAAGCGAC...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATAGGGCCAGGGAGGGTTaGGTTGCTGGGAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDRAREG*VAGRQL
Trigger: GAGCTGCCTCCCAGCAACCCAACCCTCCCTGGCCCT...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAACTGGAGGCTGGGGTCTaGGAAGTGGAGATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKLEAGV*EVEMQV
Trigger: CACCTGCATCTCCACTTCCCAGACCCCAGCCTCCAG...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCCTGGAGGCTGGGGTCTaGGAAGTGGAGATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTALEAGV*EVEMQV
Trigger: CACCTGCATCTCCACTTCCCAGACCCCAGCCTCCAG...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCTGTGGCAAAGAGCATaGGACATGAGTGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGLWQRA*DMSDGG
Trigger: GCCGCCATCACTCATGTCCCATGCTCTTTGCCACAG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTILVSH*VEGGKG
Trigger: CCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGAT...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGTGCCAGGGTGGTGCTaGGAAGCCATGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SHMKARASRCRVSWCTRSVPGWC*EAMCFC
Trigger: GCAGAAGCACATGGCTTCCCAGCACCACCCTGGCAC...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGCCGGTGTGCCAGGGTaGTGCTGGGAAGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAAGVPG*CWEAMC
Trigger: GCACATGGCTTCCCAGCACCACCCTGGCACACCGGC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTGCCGGTGTGCCAGGGTaGTGCTGGGAAGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSAGVPG*CWEAMC
Trigger: GCACATGGCTTCCCAGCACCACCCTGGCACACCGGC...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGTGTTGGGCCCTGCATaGCCCCTTCTGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAVLGPA*PLLAPG
Trigger: GCCAGGAGCCAGAAGGGGCCATGCAGGGCCCAACAC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGTGTTGGGCCCTGCATaGCCCCTTCTGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYVLGPA*PLLAPG
Trigger: GCCAGGAGCCAGAAGGGGCCATGCAGGGCCCAACAC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCGGTCGGGCTGACAGCTaGTTTGAGGGCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGGRADS*FEGSES
Trigger: AGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACC...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATCTCTGGCAGGGCCTaGTCCAAGCTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQISGRA*SKLGST
Trigger: GGTGGACCCCAGCTTGGACCAGGCCCTGCCAGAGAT...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCGGCTCTCGGCGGCCTTaGCACCCAGTCCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESGSRRP*HPVLEC
Trigger: GCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCC...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGCCCCATCACCAGAGCTaGACTCTGTACTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQPHHQS*TLYSHS
Trigger: AGAATGGGAGTACAGAGTCCAGCTCTGGTGATGGGG...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGGGTGCCTCCGCTTCTaGTGGAGCCTTAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPGCLRF*WSLKAV
Trigger: CACTGCCTTAAGGCTCCACCAGAAGCGGAGGCACCC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCATGTGTCCTCGTAAGCTaGCAGGGCTGGGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSACVLVS*QGWGTA
Trigger: TGCTGTGCCCCAGCCCTGCCAGCTTACGAGGACACA...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCCTAGGGAAGGCCTCCTaGCAGGCCCCACACTCAAGC +
Preference number: 4 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTLGKAS*QAPHSS
Trigger: GCTTGAGTGTGGGGCCTGCCAGGAGGCCTTCCCTAG...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTCCTGGAACTTTTGCTTaGCCTTGTAGTTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVPGTFA*PCSCRG
Trigger: GCCTCTGCAACTACAAGGCCAAGCAAAAGTTCCAGG...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCATCGGCTTGGTCAGGGTaGTGCCTGCGTACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSASAWSG*CLRTCL
Trigger: CAAGCACGTACGCAGGCACCACCCTGACCAAGCCGA...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTGGTTTGGGTCGGCTTaGTCAGGGTGGTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPWFGSA*SGWCLR
Trigger: ACGCAGGCACCACCCTGACCAAGCCGACCCAAACCA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGCCCACACCCTGGTTTaGGTCGGCTTGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLAHTLV*VGLVRV
Trigger: CACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGCATGCAGGTGCACTGTaGGGGTGGTGGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGHAGAL*GWWGLC
Trigger: GCAAAGACCCCACCACCCCCACAGTGCACCTGCATG...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCATGCAGGTGCACTGTaGGGGTGGTGGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SHMKARASRCRVSWCTRSHAGAL*GWWGLC
Trigger: GCAAAGACCCCACCACCCCCACAGTGCACCTGCATG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGGCATCCAGGAAGGCCTaGAGGGGGATGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGASRKA*RGMSPE
Trigger: CTCAGGACTCATCCCCCTCCAGGCCTTCCTGGATGC...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGGGGAATCTTCAAGCTTaGCCATACATGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGGNLQA*PYMASG
Trigger: CCCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCC...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCGCTACTGGCTGGCTGTaGGTCCAAAAGGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTAATGWL*VQKGVC
Trigger: ACAGACCCCCTTTTGGACTCACAGCCAGCCAGTAGC...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCATGGGATGGAAGGCCCTaGACGGCAGAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAWDGRP*TAESSP
Trigger: GGGAGAACTTTCTGCCGTTCAGGGCCTTCCATCCCA...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATCCTTTAGGGCCTGGCTaGGGCGGAATTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDPLGPG*GGIPHG
Trigger: GCCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGG...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCTGCCGTGTGGCTCTTaGGGTGCTCCTTTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVLPCGS*GAPLGP
Trigger: AGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGGTAAGCCACTGGGTTaGAGGTGGCAAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPGKPLG*RWQRGR
Trigger: TCTGCCCCTTTGCCACCTTCAACCCAGTGGCTTACC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGAAGCATGTGTCGGATaGGCACCCTCTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPEACVG*APSCGQ
Trigger: CTGCCCACAAGAGGGTGCTCATCCGACACATGCTTC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAATTGCAGAGGGATGGGTaGATCTGGTCTGGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKLQRDG*IWSGQA
Trigger: GGCTTGCCCAGACCAGATTCACCCATCCCTCTGCAA...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCCAGCCCCGGATCTGGTaGGTCCTCAGAGCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFQPRIW*VLRARS
Trigger: GGAACGGGCTCTGAGGACTCACCAGATCCGGGGCTG...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTGTGTCGGGACTGGTaGGCCTCTAACCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPVCRDW*ASNRYR
Trigger: ACGGTACCGGTTAGAGGCTCACCAGTCCCGACACAC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGCAAAGTCACAGAGCTaGCAGCGGTGGCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQAKSQS*QRWLKC
Trigger: GCATTTCAGCCACCGCTGTCAGCTCTGTGACTTTGC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATCTGCATGCAACAAGGTaGGCCAGCCCCTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYLHATR*ASPFGP
Trigger: GGGGCCAAAGGGGCTGGCTCACCTTGTTGCATGCAG...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACCGGGTGCTGGTGCCTaGACTTGCCATGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPPGAGA*TCHAAF
Trigger: AAACGCAGCATGGCAAGTTCAGGCACCAGCACCCGG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCATCCATCTCCCCGGTaGTACTGGCTGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SHMKARASRCRVSWCTRSHPSPR*YWLAVS
Trigger: ACTCACAGCCAGCCAGTAGCACCGGGGAGATGGATG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPVWLLR*SFRAWL
Trigger: CAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACAC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGGGCCTTGCGGTCGGGTaGTGCATAGCTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVGLAVG*CIAAAL
Trigger: GAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCC...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNRVGPV*QGGAGK
Trigger: CTTCCCAGCACCACCCTGGCACACCGGCCCCACTCT...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGGGCGGCTCTGGTAACTaGAGTAGTGGCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGGGSGN*SSGKGR
Trigger: TCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCC...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGGGGGTGTTGGGCCCTaGATGGCCCCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLGGVGP*MAPSGS
Trigger: GGAGCCAGAAGGGGCCATGCAGGGCCCAACACCCCC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGTGGATCACTACCATCTaGACCCGCCCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGWITTI*TRPSST
Trigger: GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCA...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCTGAGGCCGCGTTGTTaGTTGAAGCTAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPLRPRC*LKLAPH
Trigger: GTGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGAGTTGCAGTGAAACTTaGCCTGCTCAAAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQSCSET*PAQSGA
Trigger: AGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACT...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCGCCGGTGCTGCTGCATaGAACGGCTCTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPAGAAA*NGSVYR
Trigger: CCTGTAAACAGAGCCGTTGCATGCAGCAGCACCGGC...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCAGCCGCCGGTGCTGCTaGATGCAACGGCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPSRRCC*MQRLCL
Trigger: TAAACAGAGCCGTTGCATGCAGCAGCACCGGCGGCT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATTGCTTGAGCCGCCGGTaGTGCTGCATGCAACGGCTC +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDCLSRR*CCMQRL
Trigger: GAGCCGTTGCATGCAGCAGCACCGGCGGCTCAAGCA...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCTGGCTGAAATGCTGCTaGCTCCGGTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGWLKCC*LRCSSR
Trigger: TCTGGATGAGCACCGGAGGCAGCAGCATTTCAGCCA...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGCTGGTGCACACGCAGTaGATCAGCCCGGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQLVHTQ*ISPVGA
Trigger: TGCACCAACCGGGCTGATGCACTGCGTGTGCACCAG...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCTGGTGCACACGCAGTaGATCAGCCCGGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVLVHTQ*ISPVGA
Trigger: TGCACCAACCGGGCTGATGCACTGCGTGTGCACCAG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGCCCGTGCTTCTCGATaGCGGGTCTCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYARASR*RVSWCT
Trigger: TGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTGGCCTCACTGTGCTTaGGAAGGTGGGTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVWPHCA*EGGCAA
Trigger: TGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGGTTTGGCCTCACTGTaGTTGCGAAGGTGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPGLASL*LRRWVR
Trigger: GCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTGGTTTGGCCTCACTGTaGTTGCGAAGGTGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAGLASL*LRRWVR
Trigger: GCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACC...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGCACGGTGGCACACATTaGACACATAGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAHGGTH*THRVWP
Trigger: AGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTG...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTGGTGCCTGCGTACGTaGTTGACCACCTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGWCLRT*LTTWNF
Trigger: AAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGCTTGGTCAGGGTGGTaGCTGCGTACGTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPAWSGW*LRTCLT
Trigger: GGTCAAGCACGTACGCAGGCACCACCCTGACCAAGC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAATCCAGCTGCACATCATaGAGGTGCACTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKSSCTS*RCTVGV
Trigger: CACCCCCACAGTGCACCTGCATGATGTGCAGCTGGA...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCC +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKALVPV*TSQTIP
Trigger: GGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGC...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCGGAGCCGCATCTCTATaGTCGGCCGCGGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFGAASL*SAAAGT
Trigger: CGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCC...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGAAGGACAGGGGCTCTaGACAGGCCCCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPEGQGL*TGPRIP
Trigger: TGGAATCCTGGGGCCTGTCCAGAGCCCCTGTCCTTC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGAAGGACAGGGGCTCTaGACAGGCCCCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLEGQGL*TGPRIP
Trigger: TGGAATCCTGGGGCCTGTCCAGAGCCCCTGTCCTTC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGAAGGACAGGGGCTCTaGACAGGCCCCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVEGQGL*TGPRIP
Trigger: TGGAATCCTGGGGCCTGTCCAGAGCCCCTGTCCTTC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGCTTTACCAGGACACCTaGGGTCTCTCCAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGLYQDT*GLSRST
Trigger: GGTGCTCCTGGAGAGACCCCAGGTGTCCTGGTAAAG...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACTGGGTCTCACTGCACTaGTGCAGGGCCAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDWVSLH*CRASRV
Trigger: CACTCTGCTGGCCCTGCACCAGTGCAGTGAGACCCA...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACCAGCTCTACAGAGCATaGGGGGCTAGAGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDQLYRA*GAREAL
Trigger: CAGGGCCTCTCTAGCCCCCCATGCTCTGTAGAGCTG...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTAGCTCCATGCCCTGCTaGCTCCCGAAAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQASSMPC*LPKSRG
Trigger: CCCCCTGCTTTTCGGGAGCCAGCAGGGCATGGAGCT...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACCTCCTGGAGGCAGTTTaGGAGCTGGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDLLEAV*ELAAAP
Trigger: AGGAGCTGCTGCCAGCTCCCAAACTGCCTCCAGGAG...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCCACTCTGGACACATATaGGTCTTGAAGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGHSGHI*VLKRDS
Trigger: CGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTG...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGCTGGTGAAGAACTTCTaGCAGTTAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSALVKNF*QLGHWR
Trigger: CCTCCAGTGCCCTAACTGCCAGAAGTTCTTCACCAG...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTGCCAGGGTGGTGCTaGGAAGCCATGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPVPGWC*EAMCFC
Trigger: GCAGAAGCACATGGCTTCCCAGCACCACCCTGGCAC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSTGESADLWRSSRHSTAVARVE*GRCARV
Trigger: CACCCTGGCACACCGGCCCCACTCTACCCTTGCCAC...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTCACAGAGGGCACAGTaGAACTCACGGAGGCGGGTA +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPSQRAQ*NSRRRV
Trigger: TACCCGCCTCCGTGAGTTCCACTGTGCCCTCTGTGA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTTGGGCCTTGCGTTTATaGAACAAGAGTGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVWALRL*NKSVVL
Trigger: CAACACCACACTCTTGTTCCATAAACGCAAGGCCCA...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATATCTCTGGCAGGGCCTaGTCCAAGCTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYISGRA*SKLGST
Trigger: GGTGGACCCCAGCTTGGACCAGGCCCTGCCAGAGAT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAACTCCTCACTCATCTCTaGCAGGGCCTGGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKLLTHL*QGLVQA
Trigger: AGCTTGGACCAGGCCCTGCCAGAGATGAGTGAGGAG...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTCCTTCCAGTCCATCTaGCCCTTCCAGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSASFQSI*PFQSQG
Trigger: CCCCTGGGACTGGAAGGGCCAGATGGACTGGAAGGA...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGCTCGCCCCTCTCCCTaGATCACTACCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQARPSP*ITTICT
Trigger: GGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGCTCGCCCCTCTCCCTaGATCACTACCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVARPSP*ITTICT
Trigger: GGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGGCTCTCGGCGGCCTTaGCACCCAGTCCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLGSRRP*HPVLEC
Trigger: GCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGCTCTTCTGTTTCTTCTaGCTCCCTGGGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQLFCFF*LPGKLQ
Trigger: TTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAGAG...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCGGGAACCAGAGACTGTaGCAAGAGGCTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGGNQRL*QEALLF
Trigger: AAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGAGCAGGCAAAGGCTaGGGTGCCTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDGAGKG*GALVAA
Trigger: AGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCC...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATGTGTCCTCGTAAGCTaGCAGGGCTGGGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPCVLVS*QGWGTA
Trigger: TGCTGTGCCCCAGCCCTGCCAGCTTACGAGGACACA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGCCCACACTCAAGCCGTaGGTGCTGTTTACGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGPTLKP*VLFTGV
Trigger: CACACCCGTAAACAGCACCCACGGCTTGAGTGTGGG...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACACCCACACTCAAGCCGTaGGTGCTGTTTACGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTPTLKP*VLFTGV
Trigger: CACACCCGTAAACAGCACCCACGGCTTGAGTGTGGG...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCTAGGGAAGGCCTCCTaGCAGGCCCCACACTCAAGC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQALGKAS*QAPHSS
Trigger: GCTTGAGTGTGGGGCCTGCCAGGAGGCCTTCCCTAG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGGCTTTTCCCCAGTGTaGATGCGGCTGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQGFSPV*MRLCQV
Trigger: CACCTGGCACAGCCGCATCCACACTGGGGAAAAGCC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGTTGTGGATCCGCATGTaGTACTTGAGACGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVLWIRM*YLRREG
Trigger: TCCCTCTCGTCTCAAGTACCACATGCGGATCCACAA...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGCTCGGGACACTGGTATaGCTTCAGTCCTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQLGTLV*LQSCML
Trigger: AAGCATACAGGACTGAAGCCATACCAGTGTCCCGAG...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAGTGCATCAGCCCGGTTaGTGCAGTACTCACACTCGG +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKVHQPG*CSTHTR
Trigger: CCGAGTGTGAGTACTGCACCAACCGGGCTGATGCAC...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCCTGTGCTTGCGAAGGTaGGTGCGCAGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWILCLRR*VRSRKR
Trigger: GCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAG...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCAGGGAATCTTCAAGCTTaGCCATACATGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAGNLQA*PYMASG
Trigger: CCCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCC...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGCTACTGGCTGGCTGTaGGTCCAAAAGGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVATGWL*VQKGVC
Trigger: ACAGACCCCCTTTTGGACTCACAGCCAGCCAGTAGC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCGACACATATGGGTCTTaGAGAGGGACTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTADTYGS*RGTRCQ
Trigger: CTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTC...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAWPCGG*VHSSPP
Trigger: CGGTGGAGAGGAATGCACTCAACCGCCACATGGCCA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTCTGCCGTGTGGCTCTTaGGGTGCTCCTTTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSLPCGS*GAPLGP
Trigger: AGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAG...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGGTTGCACTGATACCTaGGGTCCCCTGCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQGCTDT*GPLHVF
Trigger: GAAAACATGCAGGGGACCTCAGGTATCAGTGCAACC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGAGCACTGGTTGCACTaGTACCTGAGGTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQEHWLH*YLRSPA
Trigger: TGCAGGGGACCTCAGGTATCAGTGCAACCAGTGCTC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAATCAGAGACTTGCCCTaGTGCCGCAGCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPIRDLP*CRSLWL
Trigger: CAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGAT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCATCAGAGACTTGCCCTaGTGCCGCAGCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVIRDLP*CRSLWL
Trigger: CAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGAT...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAACTTTCTGTGTCCTCTaGGGCCTGGGTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPTFCVL*GLGTWE
Trigger: CTCCCAGGTACCCAGGCCTCAGAGGACACAGAAAGT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGGGCTCTGTTTACAGGTaGAGCCACAGTCCCCACACT +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGGSVYR*SHSPHT
Trigger: AGTGTGGGGACTGTGGCTTCACCTGTAAACAGAGCC...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTCACCCCCTCGTGCTTaGGCCGCCGGTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSSPPRA*AAGAAA
Trigger: TGCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCGGCTGCCACGGCTGCTaGAGTCTCCTCATGCTGTTC +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIGCHGC*SLLMLF
Trigger: GAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCC...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTGCGGCTGTGCCAGGTaGTCTTCTGTCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVCGCAR*SSVGSW
Trigger: CCAAGAACCGACAGAAGATCACCTGGCACAGCCGCA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGCAGGAAGCGCGTCTTaGAGGCCTTGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAAGSAS*RPCHTA
Trigger: AGCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTCTCCTGGTTTCAAGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGSPGFK*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACTTGAAACCAGGAGA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTCTTGTCCCGGCAGGTaGGGCAGGAGGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGSCPGR*GRRENT
Trigger: TGTATTCTCCCTCCTGCCTCACCTGCCGGGACAAGA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGGGCTAGAGAGGCCCTaGACAGGCTGTATATGGGTC +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQGLERP*TGCIWV
Trigger: GACCCATATACAGCCTGTGCAGGGCCTCTCTAGCCC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTGCAGCTCCATGCCCTaGTGGCTCCCGAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQACSSMP*WLPKSR
Trigger: CCTGCTTTTCGGGAGCCAGCAGGGCATGGAGCTGCA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTCTGCTGCGGCTGCTaGCGTGTGGCTCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESLCCGC*RVALEV
Trigger: CACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAG...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGCTGCCAGGGTGGCCCTaGTTCTTGTGTTTACGGAAT +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGLPGWP*FLCLRN
Trigger: ATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAG...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACAAAGGGGCAGAAGGTaGAGCGCAGCTCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPQRGRR*SAALHC
Trigger: GCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTTTG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLRVGPV*QGGAGK
Trigger: CTTCCCAGCACCACCCTGGCACACCGGCCCCACTCT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGGGGGTGTTGGGCCCTaGATGGCCCCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSGGVGP*MAPSGS
Trigger: GGAGCCAGAAGGGGCCATGCAGGGCCCAACACCCCC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTGGTGTAGTGTGCAGCTaGCCTCCTCCACCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSGVVCS*PPPPLL
Trigger: CAGCAGAGGTGGAGGAGGGCAGCTGCACACTACACC...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCACCCAGTCCTGGAGTaGAGATTCAGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVHPVLE*RFRAFS
Trigger: GGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAACCTGGGAGCACAGGTTaGAGAGGGATGGGTGAATCT +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKPGSTG*RGMGES
Trigger: AGATTCACCCATCCCTCTGCAACCTGTGCTCCCAGG...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGCCGGTGCTGCTGCATaGAACGGCTCTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQAGAAA*NGSVYR
Trigger: CCTGTAAACAGAGCCGTTGCATGCAGCAGCACCGGC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCAGCCGCCGGTGCTGCTaGATGCAACGGCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVSRRCC*MQRLCL
Trigger: TAAACAGAGCCGTTGCATGCAGCAGCACCGGCGGCT...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGTGTAAGCACAATCGGTaGACTTGTAGAGACGAGTGC +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQCKHNR*TCRDEC
Trigger: GCACTCGTCTCTACAAGTGCACCGATTGTGCTTACA...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGGGCTTCAGTCCTGTATaGTTGGTCATGTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPGFSPV*LVMWYF
Trigger: GAAATACCACATGACCAAGCATACAGGACTGAAGCC...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCCTGGTGCACACGCAGTaGATCAGCCCGGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWILVHTQ*ISPVGA
Trigger: TGCACCAACCGGGCTGATGCACTGCGTGTGCACCAG...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACGCTTGCGAAGGTGGGTaGGCAGCAGGAAGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNACEGG*AAGSAS
Trigger: AGACGCGCTTCCTGCTGCGCACCCACCTTCGCAAGC...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCGGTTTGGCCTCACTGTaGTTGCGAAGGTGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIGLASL*LRRWVR
Trigger: GCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACC...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGCTTGGTCAGGGTGGTaGCTGCGTACGTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAAWSGW*LRTCLT
Trigger: GGTCAAGCACGTACGCAGGCACCACCCTGACCAAGC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGGGTGGTGGGGTCTTTaGCCACACCCTGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAGWWGL*PHPGLG
Trigger: ACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTGGGTGGTGGGGTCTTTaGCCACACCCTGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSGWWGL*PHPGLG
Trigger: ACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCC...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTGCACATCATGCAGGTaGACTGTGGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYCTSCR*TVGVVG
Trigger: CCCCACCACCCCCACAGTGCACCTGCATGATGTGCA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGGGGCAGGAGGGCGCGTaGTCTTGGACAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARGQEGA*SWTDTV
Trigger: GACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCC...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCGGGCAGGAGGGCGCGTaGTCTTGGACAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFGQEGA*SWTDTV
Trigger: GACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCC...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGTCTCCCCGGTGCTACTaGCTGGCTGTGAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGSPRCY*LAVSPK
Trigger: TTTTGGACTCACAGCCAGCCAGTAGCACCGGGGAGA...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGCACTCTGGACACATATaGGTCTTGAAGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAHSGHI*VLKRDS
Trigger: CGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTG...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCTGGAGGCTGGGGTCTaGGAAGTGGAGATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQALEAGV*EVEMQV
Trigger: CACCTGCATCTCCACTTCCCAGACCCCAGCCTCCAG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGCTGGTGAAGAACTTCTaGCAGTTAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQLVKNF*QLGHWR
Trigger: CCTCCAGTGCCCTAACTGCCAGAAGTTCTTCACCAG...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTTVVAQ*AVVGLF
Trigger: GAAAAGGCCCACCACTGCCCACTGTGCCACTACAGT...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPTVVAQ*AVVGLF
Trigger: GAAAAGGCCCACCACTGCCCACTGTGCCACTACAGT...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAATGCATGCTGGCCATGTaGCGGTTGAGTGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKCMLAM*RLSAFL
Trigger: GAGGAATGCACTCAACCGCCACATGGCCAGCATGCA...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGTGCCAGGGTGGTGCTaGGAAGCCATGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAVPGWC*EAMCFC
Trigger: GCAGAAGCACATGGCTTCCCAGCACCACCCTGGCAC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGTGGGCCTTGCGTTTATaGAACAAGAGTGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVWALRL*NKSVVL
Trigger: CAACACCACACTCTTGTTCCATAAACGCAAGGCCCA...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACGACCTCCTCAAGGGGTaGCTCAGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDDLLKG*LSHRLQ
Trigger: CTGGAGTCTGTGACTGAGCCACCCCTTGAGGAGGTC...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTCCTTCCAGTCCATCTaGCCCTTCCAGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYSFQSI*PFQSQG
Trigger: CCCCTGGGACTGGAAGGGCCAGATGGACTGGAAGGA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGGGGAACCAGAGACTGTaGCAAGAGGCTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAGNQRL*QEALLF
Trigger: AAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCACATCAGGCTGGGTCTaGGGGGTCCCTCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVTSGWV*GVPRFP
Trigger: AGGAAAACGAGGGACCCCCCAGACCCAGCCTGATGT...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCTTGGTACCAAACGTCTaGGGGCAAGAGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLLVPNV*GQELQG
Trigger: CCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAA...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCAGCGCAGTTTCGAGTTaGTACCAAACGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTASAVSS*YQTSGG
Trigger: GCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCT...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGAACTGGGCTTCACACTaGGAGCAGGCAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQNWASH*EQAKAG
Trigger: CCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTT...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTAACTGGGCTTCACACTaGGAGCAGGCAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSANWASH*EQAKAG
Trigger: CCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTGTGTCCTCGTAAGCTaGCAGGGCTGGGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQACVLVS*QGWGTA
Trigger: TGCTGTGCCCCAGCCCTGCCAGCTTACGAGGACACA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTGTGTCCTCGTAAGCTaGCAGGGCTGGGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWICVLVS*QGWGTA
Trigger: TGCTGTGCCCCAGCCCTGCCAGCTTACGAGGACACA...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCTCTTCTGTCGGTTCTTaGTGCTGTAAGCACAATCGG +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTSSVGS*CCKHNR
Trigger: CCGATTGTGCTTACAGCACCAAGAACCGACAGAAGA...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCCTGTGCTTGCGAAGGTaGGTGCGCAGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFLCLRR*VRSRKR
Trigger: GCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAG...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCTGCACACATAGGGTTTaGCCTCACTGTGCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGCTHRV*PHCACE
Trigger: TTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCA...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCAGGAGCAGGAGGGCTaGGATCCTCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAQEQEG*DPPAAH
Trigger: ATGTGCAGCTGGAGGATCCCAGCCCTCCTGCTCCTG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTCAGGAGCAGGAGGGCTaGGATCCTCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSQEQEG*DPPAAH
Trigger: ATGTGCAGCTGGAGGATCCCAGCCCTCCTGCTCCTG...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp GCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTaGTCCCGGCAGGTGAGGCAGGAGGGAGAATACAGT +
Preference number: 4 (lower is better)
Translates to: AQAPISKPESLL*SRQVRQEGEYS
Trigger: ACTGTATTCTCCCTCCTGCCTCACCTGCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CAA 72 bp CCATTCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTaGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PFPPPGCDVPAV*SVYLLSDCGPG
Trigger: GCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CAA 72 bp GGCTTCACACTGGGAGCAGGCAAAGGCTGGGGTGCCTaGGTGGCAGCTGTTGACATGACGAGTGATGTCATG +
Preference number: 4 (lower is better)
Translates to: GFTLGAGKGWGA*VAAVDMTSDVM
Trigger: CATGACATCACTCGTCATGTCAACAGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCCCAGTGTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGCACCATGGCTCCGCTaGTGCTGCCGGAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFAPWLR*CCRKSL
Trigger: CAAACTCTTCCGGCAGCATCAGCGGAGCCATGGTGC...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTGGGATGGAAGGCCCTaGACGGCAGAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYWDGRP*TAESSP
Trigger: GGGAGAACTTTCTGCCGTTCAGGGCCTTCCATCCCA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTGGGATGGAAGGCCCTaGACGGCAGAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAWDGRP*TAESSP
Trigger: GGGAGAACTTTCTGCCGTTCAGGGCCTTCCATCCCA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGACACATATGGGTCTTaGAGAGGGACTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLDTYGS*RGTRCQ
Trigger: CTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGTGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVWPCGG*VHSSPP
Trigger: CGGTGGAGAGGAATGCACTCAACCGCCACATGGCCA...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCAAAGAGCATGGGACATaGGTGATGGCGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLKEHGT*VMAALH
Trigger: GTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTT...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAAAAGAGCATGGGACATaGGTGATGGCGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPKEHGT*VMAALH
Trigger: GTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGGTAAGCCACTGGGTTaGAGGTGGCAAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAGKPLG*RWQRGR
Trigger: TCTGCCCCTTTGCCACCTTCAACCCAGTGGCTTACC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGAGCACTGGTTGCACTaGTACCTGAGGTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYEHWLH*YLRSPA
Trigger: TGCAGGGGACCTCAGGTATCAGTGCAACCAGTGCTC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAAGAGTGTGGTGTTGCTaGAGGTGCGGTAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTRVWCC*RCGSHR
Trigger: TCTGTGACTACCGCACCTTCAGCAACACCACACTCT...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQVSLGP*VMTLTQ
Trigger: CTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGAC...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATACTTTCTGTGTCCTCTaGGGCCTGGGTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYTFCVL*GLGTWE
Trigger: CTCCCAGGTACCCAGGCCTCAGAGGACACAGAAAGT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACAGCCTTCAGCCACGTaGGAGGTAATAGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPQPSAT*EVIEES
Trigger: GCTCTCCTCTATTACCTCTCACGTGGCTGAAGGCTG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGCCTTCAGCCACGTaGGAGGTAATAGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVQPSAT*EVIEES
Trigger: GCTCTCCTCTATTACCTCTCACGTGGCTGAAGGCTG...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCAGCCCCGGATCTGGTaGGTCCTCAGAGCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSQPRIW*VLRARS
Trigger: GGAACGGGCTCTGAGGACTCACCAGATCCGGGGCTG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACATGGCAGCTGTTGACATaGCGAGTGATGTCATGGCGA +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTWQLLT*RVMSWR
Trigger: TCGCCATGACATCACTCGTCATGTCAACAGCTGCCA...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGCAAAGTCACAGAGCTaGCAGCGGTGGCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPAKSQS*QRWLKC
Trigger: GCATTTCAGCCACCGCTGTCAGCTCTGTGACTTTGC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCGGCTGCCACGGCTGCTaGAGTCTCCTCATGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESGCHGC*SLLMLF
Trigger: GAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCC...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCGCTGATGGCGGCATGTaGAGTCACAAAAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGADGGM*SHKRGS
Trigger: ACTGCCCCTTTTGTGACTTCACATGCCGCCATCAGC...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACACACACTGCTCACACATaGAAGCCCGTGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTHTAHT*KPVLLD
Trigger: ATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTG...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGTGTGGGTGAGGGCATaGTGGCGCAGGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKVWVRA*WRRPAA
Trigger: GGCTGCTGGCCTGCGCCATCATGCCCTCACCCACAC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGAGATTCCAGAGCCCTaGCTACAGGTGATCAGCGGT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVEIPEP*LQVISG
Trigger: ACCGCTGATCACCTGTAGTCAGGGCTCTGGAATCTC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCGGGTGGGGCTGGGCTaGGCAGGAACTTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESRVGLG*AGTCEI
Trigger: AATCTCACAAGTTCCTGCTCAGCCCAGCCCCACCCG...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACACTTCCTCTTGCCGGCTaGCGGGGTACTCTATGTTTT +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTLPLAG*RGTLCF
Trigger: AAAACATAGAGTACCCCGGCAGCCGGCAAGAGGAAG...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450765.5
CDS-3UTR GCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCCTCAGTAGGTATAGGTaGAGGGTCCCGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLLSRYR*RVPGRT
Trigger: TGTCCTTCCCGGGACCCTGCACCTATACCTACTGAG...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTCTTCAGCTGTCTCCTaGCCAGGCAAGGGTGTACCT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVSSAVS*PGKGVP
Trigger: AGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCTGGCTCTGCTGCGGCTaGTGCCGTGTGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPAWLCCG*CRVALE
Trigger: CTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCA...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCGGGTGCTGCATAGCTaGAGCCCTCCTGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNRVLHS*SPPESS
Trigger: GCTGCTTTCAGGAGGGCTGCAGCTATGCAGCACCCG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCCTTGCGGTCGGGTGCTaGATAGCTGCAGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISLAVGC*IAAALL
Trigger: CAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAG...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGCTTGCGGTCGGGTGCTaGATAGCTGCAGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVLAVGC*IAAALL
Trigger: CAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAG...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAATGGGTCTCCTTCAGGTaGTTAATGAAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKWVSFR*LMKALR
Trigger: CCGCAAGGCCTTCATTAAGCACCTGAAGGAGACCCA...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTCTGCCAGGGTGGCCCTaGTTCTTGTGTTTACGGAAT +
Preference number: 4 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVLPGWP*FLCLRN
Trigger: ATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAG...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCAGTGTGGGGAGCGGCCATGAGCATGCATCTTaGCTACATGATCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LYRRWGRLSALRSSVGSGHEHAS*LHDPGK
Trigger: CTTACCAGGATCATGTAGGCAAGATGCATGCTCATG...GCCGCTCCCCACACTGGACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSRVGPV*QGGAGK
Trigger: CTTCCCAGCACCACCCTGGCACACCGGCCCCACTCT...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTCACGGAGGCGGGTATaGTTGCAGTTCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSASRRRV*LQFSWL
Trigger: GAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGA...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCATAGCCATGGGCCTTaGGTTTATGGAACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGHSHGP*VYGTRV
Trigger: CACTCTTGTTCCATAAACGCAAGGCCCATGGCTATG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTCTGAGGCCGCGTTGTTaGTTGAAGCTAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSLRPRC*LKLAPH
Trigger: GTGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAG...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACCCTGGGAGCACAGGTTaGAGAGGGATGGGTGAATCT +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDPGSTG*RGMGES
Trigger: AGATTCACCCATCCCTCTGCAACCTGTGCTCCCAGG...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGCCGGTGCTGCTGCATaGAACGGCTCTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYAGAAA*NGSVYR
Trigger: CCTGTAAACAGAGCCGTTGCATGCAGCAGCACCGGC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGGCTTCACCCCCTCGTaGTTGAGCCGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIGFTPS*LSRRCC
Trigger: GCAGCACCGGCGGCTCAAGCACGAGGGGGTGAAGCC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCACTCAAGCCGTGGGTaGTGTTTACGGGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVHSSRG*CLRVCP
Trigger: AGGACACACCCGTAAACAGCACCCACGGCTTGAGTG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCGGTGGCTGAAATGCTaGTGCCTCCGGTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESRWLKC*CLRCSS
Trigger: GGATGAGCACCGGAGGCAGCAGCATTTCAGCCACCG...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCCGGTGGCTGAAATGCTaGTGCCTCCGGTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFRWLKC*CLRCSS
Trigger: GGATGAGCACCGGAGGCAGCAGCATTTCAGCCACCG...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGCCCGTGCTTCTCGATaGCGGGTCTCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLARASR*RVSWCT
Trigger: TGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCACACATGAAAGCCCGTaGTTCTCGATGCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLTHESP*FSMPGL
Trigger: GAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGT...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGCTTGCGAAGGTGGGTaGGCAGCAGGAAGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLACEGG*AAGSAS
Trigger: AGACGCGCTTCCTGCTGCGCACCCACCTTCGCAAGC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTGGTGCCTGCGTACGTaGTTGACCACCTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPWCLRT*LTTWNF
Trigger: AAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGGCTTGGTCAGGGTGGTaGCTGCGTACGTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVAWSGW*LRTCLT
Trigger: GGTCAAGCACGTACGCAGGCACCACCCTGACCAAGC...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGGGTGGTGGGGTCTTTaGCCACACCCTGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFGWWGL*PHPGLG
Trigger: ACCCAAACCAGGGTGTGGGCAAAGACCCCACCACCC...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTCCAGCTGCACATCATaGAGGTGCACTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQASSCTS*RCTVGV
Trigger: CACCCCCACAGTGCACCTGCATGATGTGCAGCTGGA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCC +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDALVPV*TSQTIP
Trigger: GGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGC...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACACCCTGCCTTGGACCTaGATGCAACAAGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDTLPWT*MQQGEP
Trigger: TGGCTCACCTTGTTGCATGCAGGTCCAAGGCAGGGT...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGCACTATGTTTCCGGGTaGTGGTGCCTGAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGHYVSG*WCLNLP
Trigger: TGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTG...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTCTCCCCGGTGCTACTaGCTGGCTGTGAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGSPRCY*LAVSPK
Trigger: TTTTGGACTCACAGCCAGCCAGTAGCACCGGGGAGA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGGCAGGGCCAGCAGAGTaGGCTCTGCGAAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARAGPAE*ALRSSV
Trigger: AACAGAGCTTCGCAGAGCCCACTCTGCTGGCCCTGC...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTTCAGGGCCTGGGGTTaGGCAAACTCCTGTCTACAC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVFRAWG*ANSCLH
Trigger: GTGTAGACAGGAGTTTGCCCAACCCCAGGCCCTGAA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATGCTCCTTTAGGGCCTaGCTGAGGCGGAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPCSFRA*LRRNSS
Trigger: TGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTCTGTGGCAAAGAGCATaGGACATGAGTGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSALWQRA*DMSDGG
Trigger: GCCGCCATCACTCATGTCCCATGCTCTTTGCCACAG...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCCCATGGCTTCGGCTGTaGCAAAGAGCATGGGACATG +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLPWLRL*QRAWDM
Trigger: CATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGG...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTCACAGAGGGCACAGTaGAACTCACGGAGGCGGGTA +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYSQRAQ*NSRRRV
Trigger: TACCCGCCTCCGTGAGTTCCACTGTGCCCTCTGTGA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTATCTGGTGGGGGTGTTaGGCCCTGCATGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: DQRGVHCGSTGESADLWRIWWGC*ALHGPF
Trigger: GAAGGGGCCATGCAGGGCCCAACACCCCCACCAGAT...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTGGAGGGCTCAGACACTaGCTTTTCCAGAAGGGGATT +
Preference number: 4 (lower is better)
Translates to: SHMKARASRCRVSWCTRSGGLRH*LFQKGI
Trigger: AATCCCCTTCTGGAAAAGCCAGTGTCTGAGCCCTCC...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCACTTCTTCAGCAGGTaGGTGCTGAGGCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAHFFSR*VLRPRC
Trigger: ACAACGCGGCCTCAGCACCCACCTGCTGAAGAAGTG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAAGAGCCCGTTCCTGCTaGCAGCTAAAGGGACATGTA +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTRARSC*QLKGHV
Trigger: TACATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCT...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTGCCTCCGCTTCTGGTaGAGCCTTAAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYCLRFW*SLKAVA
Trigger: TGCCACTGCCTTAAGGCTCCACCAGAAGCGGAGGCA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGGGTGCCTCCGCTTCTaGTGGAGCCTTAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFGCLRF*WSLKAV
Trigger: CACTGCCTTAAGGCTCCACCAGAAGCGGAGGCACCC...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCAAAGTGGACAGAAGTaGGTAGGTGTTTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPQSGQK*VGVLSC
Trigger: ACATGACAAAACACCTACCCACTTCTGTCCACTTTG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGGGAGCAGGCAAAGGCTaGGGTGCCTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVGAGKG*GALVAA
Trigger: AGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCC...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTAACTGGGCTTCACACTaGGAGCAGGCAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQANWASH*EQAKAG
Trigger: CCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTT...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGATGTGGTATTTCAGCTaGTTGACCCACTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQMWYFS*LTHLHL
Trigger: CAAGTGCAAGTGGGTCAACCAGCTGAAATACCACAT...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCCGATGCCGGGTCTCCTaGTGCACACGCAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFRCRVS*CTRSAS
Trigger: TGATGCACTGCGTGTGCACCAGGAGACCCGGCATCG...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCTCTTTGCCCACACCCTaGTTTGGGTCGGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLSLPTP*FGSAWS
Trigger: TGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGA...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTTCCTATACAGGAGGTaGGGCAGGCTTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVFLYRR*GRLSAL
Trigger: GAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
3UTR CAA 72 bp TCATGTACCCTTAACCGGTGCAAGCGCAGTTTCGAGTaGGTACCAAACGTCTGGGGGCAAGAGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCTLNRCKRSFE*VPNVWGQELQG
Trigger: CCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGGGAATCTTCAAGCTTaGCCATACATGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAGNLQA*PYMASG
Trigger: CCCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCCTACTGTCTCCACAATaGTCTCCATGTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPLLSPQ*SPCSLV
Trigger: GACCAGGGAACATGGAGATCATTGTGGAGACAGTAG...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGACACATATGGGTCTTaGAGAGGGACTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQADTYGS*RGTRCQ
Trigger: CTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGCATGGGACATGAGTaGTGGCGGCACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLSMGHE*WRHSTA
Trigger: GGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGGTTGCACTGATACCTaGGGTCCCCTGCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVGCTDT*GPLHVF
Trigger: GAAAACATGCAGGGGACCTCAGGTATCAGTGCAACC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGGTTGCACTGATACCTaGGGTCCCCTGCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVGCTDT*GPLHVF
Trigger: GAAAACATGCAGGGGACCTCAGGTATCAGTGCAACC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCCTGTCTTCCAGTGTTaGCCTCCTCACTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVPVFQC*PPHSSL
Trigger: CAGAGATGAGTGAGGAGGTCAACACTGGAAGACAGG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCAGGTGGAGTTGTCTTaGAGGTTCCTACCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SHMKARASRCRVSWCTRSQVELS*RFLPSC
Trigger: ACAACTGGGTAGGAACCTTCAAGACAACTCCACCTG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTCAGCCTTCAGCCACGTaGGAGGTAATAGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSQPSAT*EVIEES
Trigger: GCTCTCCTCTATTACCTCTCACGTGGCTGAAGGCTG...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGTGTGTCGGGACTGGTaGGCCTCTAACCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLVCRDW*ASNRYR
Trigger: ACGGTACCGGTTAGAGGCTCACCAGTCCCGACACAC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGCAAAGTCACAGAGCTaGCAGCGGTGGCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYAKSQS*QRWLKC
Trigger: GCATTTCAGCCACCGCTGTCAGCTCTGTGACTTTGC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGGCTGCCACGGCTGCTaGAGTCTCCTCATGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLGCHGC*SLLMLF
Trigger: GAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCGCCTGCGTACGTGCTTaGCCACCTGGAACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIACVRA*PPGTFA
Trigger: AGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGC...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGCCTGCGTACGTGCTTaGCCACCTGGAACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYACVRA*PPGTFA
Trigger: AGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATTCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDSFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYSFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGCTGTGGCTATGTGCTaGAGCCAGACTTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFAVAMC*SQTSCV
Trigger: CACGCAGGAAGTCTGGCTTCAGCACATAGCCACAGC...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCTCAGTAGGTATAGGTaGAGGGTCCCGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQALSRYR*RVPGRT
Trigger: TGTCCTTCCCGGGACCCTGCACCTATACCTACTGAG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCCAGGGAGGGTTGGGTTaGTGGGAGGCAGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPAQGGLG*WEAALQ
Trigger: CTGTAGAGCTGCCTCCCAGCAACCCAACCCTCCCTG...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCGGCGGGCTCTGGCCCTaGAGAGGGCCAGGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFGGLWP*RGPGRV
Trigger: AACCCTCCCTGGCCCTCTGCAGGGCCAGAGCCCGCC...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGGTCTGCCTCAGGTGGTaGTGCAGACCCTTGCGATCT +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARVCLRW*CRPLRS
Trigger: AGATCGCAAGGGTCTGCAGCACCACCTGAGGCAGAC...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCATGTGGCGGTTGAGTaGATTCCTCTCCACCGCACT +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAHVAVE*IPLHRT
Trigger: AGTGCGGTGGAGAGGAATGCACTCAACCGCCACATG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCCGGGTGCTGCATAGCTaGAGCCCTCCTGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPARVLHS*SPPESS
Trigger: GCTGCTTTCAGGAGGGCTGCAGCTATGCAGCACCCG...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCTTGCGGTCGGGTGCTaGATAGCTGCAGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSLAVGC*IAAALL
Trigger: CAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGCATAGCCACATTCAGTaGACATGTAATCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AQASSPAESTVAHIAHIGHSHIQ*TCNPWC
Trigger: ACACCAAGGATTACATGTGCACTGAATGTGGCTATG...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCAGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAEAMCF*SSYFRL
Trigger: CAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTC...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTCACGGAGGCGGGTATaGTTGCAGTTCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQASRRRV*LQFSWL
Trigger: GAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTTCTGGCTCCTGGCTTaGATAGCGGAGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLFWLLA*IAELPG
Trigger: GCCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCCCTCTAGGTGTAGTGTaGAGCTGCCCTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFPLGVV*SCPPPP
Trigger: AGGTGGAGGAGGGCAGCTGCACACTACACCTAGAGG...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCCACCCAGTCCTGGAGTaGAGATTCAGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFHPVLE*RFRAFS
Trigger: GGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTG...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCGGAATGGGCAGGAGTTaGAGTGAAACTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTGMGRS*SETCPA
Trigger: AGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCC...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGAGCAGAGTCCCCATTaGTCAACGGGGACACATCAG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAEQSPH*STGTHQ
Trigger: CTGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATCTCAGAGCCCGTTCCTaGTGGCAGCTAAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYLRARS*WQLKGH
Trigger: ATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCTGAG...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCCCACGGGCTGGGGCTaGAGTGGGGTGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKPTGWG*SGVPPL
Trigger: AAGCGGAGGCACCCCACTGCAGCCCCAGCCCGTGGG...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCTTGAGCCGCCGGTGCTaGTGCATGCAACGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPALSRRC*CMQRLC
Trigger: ACAGAGCCGTTGCATGCAGCAGCACCGGCGGCTCAA...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTTGAGCCGCCGGTGCTaGTGCATGCAACGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLLSRRC*CMQRLC
Trigger: ACAGAGCCGTTGCATGCAGCAGCACCGGCGGCTCAA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGAGGGGATGCGGCCAATaGCTGTGTGTCGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVRGCGQ*LCVGTG
Trigger: ACCAGTCCCGACACACAGGCATTGGCCGCATCCCCT...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATGTCGGCGCAGAGCATaGTGCTTAAGTGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPCRRRA*CLSAVS
Trigger: AGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGCCGGGTCTCCTGGTaGACACGCAGTGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSCRVSW*TRSASA
Trigger: GGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTACACATGAAAGCCCGTaGTTCTCGATGCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQATHESP*FSMPGL
Trigger: GAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGT...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGCTTGCGAAGGTGGGTaGGCAGCAGGAAGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSACEGG*AAGSAS
Trigger: AGACGCGCTTCCTGCTGCGCACCCACCTTCGCAAGC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTCACGGTGGCACACATTaGACACATAGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAHGGTH*THRVWP
Trigger: AGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTG...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGCTTGGCCTTGTAGTTaGAGAGGCGGCAAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVAWPCS*RGGKRR
Trigger: CCTTCTTTTGCCGCCTCTGCAACTACAAGGCCAAGC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCTGCACATCATGCAGGTaGACTGTGGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPACTSCR*TVGVVG
Trigger: CCCCACCACCCCCACAGTGCACCTGCATGATGTGCA...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCAGGTGTGAGCCACCGTaGCCGGCCTTTGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPARCEPP*PAFGCI
Trigger: AATGCACCCAAAGGCCGGGCACGGTGGCTCACACCT...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACGCAGTGAGCTATGACTaGCCCACTGCATTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDAVSYD*PTAFQL
Trigger: AAGCTGGAATGCAGTGGGGCAGTCATAGCTCACTGC...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCCCCAGGTTGTGACGTaGCCGCTGTTTTGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARPQVVT*PLFCPS
Trigger: AGACGGACAAAACAGCGGGCACGTCACAACCTGGGG...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAGAGGTAGGAGACAGGTaGGCACCAGAGAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKEVGDR*APEKKY
Trigger: GTATTTCTTCTCTGGTGCCCACCTGTCTCCTACCTC...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTACCAGCAGGCAGCCTaGCTCAGTAGGTATAGGTGC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAYQQAA*LSRYRC
Trigger: GCACCTATACCTACTGAGCCAGGCTGCCTGCTGGTA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCCCTCTTCAGTTGCTGTaGCCTCTACCAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFPLQLL*PLPAGS
Trigger: GCTGCCTGCTGGTAGAGGCCACAGCAACTGAAGAGG...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGTGGCTCTTCAGGGCCTaGGGTTGGGCAAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVWLFRA*GWANSC
Trigger: ACAGGAGTTTGCCCAACCCCAGGCCCTGAAGAGCCA...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCAGCAGCTCCTGGGATaGAAGGCCCTGAACGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLQQLLG*KALNGR
Trigger: TCTGCCGTTCAGGGCCTTCCATCCCAGGAGCTGCTG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGTTATCCACAGCCTTTTaGGAGTCCTTCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGLSTAF*ESFWVS
Trigger: TGACACCCAGAAGGACTCCCAAAAGGCTGTGGATAA...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCCTGGTGAAGAACTTCTaGCAGTTAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGLVKNF*QLGHWR
Trigger: CCTCCAGTGCCCTAACTGCCAGAAGTTCTTCACCAG...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTAGCTCCCGCAGCAGATaGGTCTTGAGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSASSRSR*VLSLLL
Trigger: TAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTGCTCCTTTAGGGCCTaGCTGAGGCGGAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYCSFRA*LRRNSS
Trigger: TGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCTGTGGCAAAGAGCATaGGACATGAGTGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQALWQRA*DMSDGG
Trigger: GCCGCCATCACTCATGTCCCATGCTCTTTGCCACAG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCATCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSASSLPG*PCFLCL
Trigger: TAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGA...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATGAGCACCCTCTTGTaGGCAGTGGCAAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQMSTLL*AVAKLH
Trigger: GTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTTCACAGAGGGCACAGTaGAACTCACGGAGGCGGGTA +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFSQRAQ*NSRRRV
Trigger: TACCCGCCTCCGTGAGTTCCACTGTGCCCTCTGTGA...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTATCTGGTGGGGGTGTTaGGCCCTGCATGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSIWWGC*ALHGPF
Trigger: GAAGGGGCCATGCAGGGCCCAACACCCCCACCAGAT...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCAGGATGGAGGATTTGTaGAGGGCTCAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLRMEDL*RAQTLA
Trigger: AGCCAGTGTCTGAGCCCTCCACAAATCCTCCATCCT...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTCTTGGCACCCAGTCCTaGAGTGCAGATTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFLGTQS*SADSGP
Trigger: AGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAG...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGTGGGTGAATCTGGTCTaGGCAAGCCCTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGWVNLV*ASPCSF
Trigger: GAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCA...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCACATCAGGCTGGGTCTaGGGGGTCCCTCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFTSGWV*GVPRFP
Trigger: AGGAAAACGAGGGACCCCCCAGACCCAGCCTGATGT...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACCCCATCACCAGAGCTaGACTCTGTACTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPPHHQS*TLYSHS
Trigger: AGAATGGGAGTACAGAGTCCAGCTCTGGTGATGGGG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCTGCCTCCGCTTCTGGTaGAGCCTTAAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFCLRFW*SLKAVA
Trigger: TGCCACTGCCTTAAGGCTCCACCAGAAGCGGAGGCA...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCACCGGTACCGTCTGGTaGTCGAAAAGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTTGTVW*SKSHRR
Trigger: CCTTCTGTGACTTTTCGACCACCAGACGGTACCGGT...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACTAACCGGTACCGTCTaGTGGTCGAAAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GHSGTHGGGYACSSHGSALTGTV*WSKSHR
Trigger: TCTGTGACTTTTCGACCACCAGACGGTACCGGTTAG...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGGCTTTTCCCCAGTGTaGATGCGGCTGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLGFSPV*MRLCQV
Trigger: CACCTGGCACAGCCGCATCCACACTGGGGAAAAGCC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGTTCCGTTCCTCCTTGTaGATCCGCATGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGFRSSL*IRMWYL
Trigger: CAAGTACCACATGCGGATCCACAAGGAGGAACGGAA...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTTCCGTTCCTCCTTGTaGATCCGCATGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPFRSSL*IRMWYL
Trigger: CAAGTACCACATGCGGATCCACAAGGAGGAACGGAA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCGTGCATCAGCCCGGTTaGTGCAGTACTCACACTCGG +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFVHQPG*CSTHTR
Trigger: CCGAGTGTGAGTACTGCACCAACCGGGCTGATGCAC...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCGATGCCGGGTCTCCTaGTGCACACGCAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLRCRVS*CTRSAS
Trigger: TGATGCACTGCGTGTGCACCAGGAGACCCGGCATCG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTGCACACATAGGGTTTaGCCTCACTGTGCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPCTHRV*PHCACE
Trigger: TTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCGGCAAAAGAAGGGGTaGCGGTCGGTGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSRQKKG*RSVWVR
Trigger: CCTCACCCACACCGACCGCCACCCCTTCTTTTGCCG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGACGTGCTTGACCACCTaGAACTTTTGCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGTCLTT*NFCLAL
Trigger: CAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGT...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTCGGCTTGGTCAGGGTaGTGCCTGCGTACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLSAWSG*CLRTCL
Trigger: CAAGCACGTACGCAGGCACCACCCTGACCAAGCCGA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGTGGTTTGGGTCGGCTTaGTCAGGGTGGTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVWFGSA*SGWCLR
Trigger: ACGCAGGCACCACCCTGACCAAGCCGACCCAAACCA...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTCTTTGCCCACACCCTaGTTTGGGTCGGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQASLPTP*FGSAWS
Trigger: TGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCAGGAGCAGGAGGGCTaGGATCCTCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLQEQEG*DPPAAH
Trigger: ATGTGCAGCTGGAGGATCCCAGCCCTCCTGCTCCTG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACCAGTACACCCTGCCTTaGACCTGCATGCAACAAGGT +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDQYTLP*TCMQQG
Trigger: ACCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTG...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGCCAGGCTGGTCTCCTaGTTTCAAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAARLVS*FQVICP
Trigger: TGGGCAGATCACTTGAAACCAGGAGACCAGCCTGGC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGCATTTCCGCCAGAATaGCGGCTGTGGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYAFPPE*RLWLCA
Trigger: AGCACATAGCCACAGCCGCCATTCTGGCGGAAATGC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACCTCATCAAGGAGGCTaGTCAGGACCAAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPPHQGG*SGPKWR
Trigger: CCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTAGAACCTTCACCGCGTaGTCTTGGACAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSARTFTA*SWTDTV
Trigger: GACTGTGTCTGTCCAAGACCACGCGGTGAAGGTTCT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433921.5
3UTR CAA 72 bp CGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATaGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RARCFVRLSVVR*WPRLLFPSLSP
Trigger: GGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CAA 72 bp TGGGCCTTTTCACCCAGCTCCCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTGAAGAACTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WAFSPSSRSRWV*SLLLLVKNFWQ
Trigger: CTGCCAGAAGTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCTGGGTGAAAAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp CCCGTATGTAGAAGCATGTGTCGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: PVCRSMCRMSTL*WAVAKLHSGHW
Trigger: CCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCGACACATGCTTCTACATACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACTACTGTCTCCACAATaGTCTCCATGTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPLLSPQ*SPCSLV
Trigger: GACCAGGGAACATGGAGATCATTGTGGAGACAGTAG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCTACTGTCTCCACAATaGTCTCCATGTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVLLSPQ*SPCSLV
Trigger: GACCAGGGAACATGGAGATCATTGTGGAGACAGTAG...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGGACACATATGGGTCTTaGAGAGGGACTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVDTYGS*RGTRCQ
Trigger: CTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTC...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTAGAGTGTGGTGTTGCTaGAGGTGCGGTAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQARVWCC*RCGSHR
Trigger: TCTGTGACTACCGCACCTTCAGCAACACCACACTCT...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGTTGCACTCAGGACACTGGTGGATCTTTTCATGAGCATGCATCTTGCCTACACAGTCCCAGGTTCGTaGCCTGGCCCCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: KVALRTLVDLFMSMHLAYTVPGS*PGPSGR
Trigger: CCGACCTGAGGGGCCAGGTCACGAACCTGGGACTGT...GTAGGCAAGATGCATGCTCATGAAAAGATCCACCAGTGTCCTGAGTGCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATCCTGTCTTCCAGTGTTaGCCTCCTCACTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDPVFQC*PPHSSL
Trigger: CAGAGATGAGTGAGGAGGTCAACACTGGAAGACAGG...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCACTTTCTGTGTCCTCTaGGGCCTGGGTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLTFCVL*GLGTWE
Trigger: CTCCCAGGTACCCAGGCCTCAGAGGACACAGAAAGT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGTGTGTCGGGACTGGTaGGCCTCTAACCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSVCRDW*ASNRYR
Trigger: ACGGTACCGGTTAGAGGCTCACCAGTCCCGACACAC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGGCTGACAGCGGTGGCTaGAATGCTGCTGCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKADSGG*NAAASG
Trigger: ACCGGAGGCAGCAGCATTTCAGCCACCGCTGTCAGC...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCACACTGCTCACACATaGAAGCCCGTGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAHTAHT*KPVLLD
Trigger: ATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGTGTGGGTGAGGGCATaGTGGCGCAGGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTVWVRA*WRRPAA
Trigger: GGCTGCTGGCCTGCGCCATCATGCCCTCACCCACAC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAGCCTGCGTACGTGCTTaGCCACCTGGAACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GSTGESADLWRSSRHSTAACVRA*PPGTFA
Trigger: AGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGC...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATTGTGGATCCACTGGTaGAAGTGCAGATCTTTGGCG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPLWIHW*KCRSLA
Trigger: CGCCAAAGATCTGCACTTTCACCAGTGGATCCACAA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCGGTTGCAGTGAGCTATaGCTGCCCCACTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESGCSEL*LPHCIP
Trigger: TGGAATGCAGTGGGGCAGTCATAGCTCACTGCAACC...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGTGGCTCTGCTGCGGCTaGTGCCGTGTGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKWLCCG*CRVALE
Trigger: CTCAAGAGCCACACGGCAGCAGCCGCAGCAGAGCCA...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGCATGAGCATGCATCTTaGCTACATGATCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQHEHAS*LHDPGK
Trigger: CTTACCAGGATCATGTAGGCAAGATGCATGCTCATG...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTATACCTGAGGTCCCCTaGATGTTTTCGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAIPEVP*MFSHVH
Trigger: GTGCACATGCGAAAACATGCAGGGGACCTCAGGTAT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPEAMCF*SSYFRL
Trigger: CAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGGGCGGCTCTGGTAACTaGAGTAGTGGCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARGGSGN*SSGKGR
Trigger: TCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCC...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACGGAGGCGGGTATGCTTaGAGTTCTCATGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNGGGYA*SSHGSA
Trigger: TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCC...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCATGGGGAGCCTCACTaGCCTCCTGTCTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLHGEPH*PPVFQC
Trigger: ACACTGGAAGACAGGAGGGCAGTGAGGCTCCCCATG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTGGATCACTACCATCTaGACCCGCCCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLWITTI*TRPSST
Trigger: GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTCACCCAGTCCTGGAGTaGAGATTCAGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DQRGVHCGSTGESADLWRHPVLE*RFRAFS
Trigger: GGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTG...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTCCCTGCTCAAAGCGGTaGTTCTTCAGGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DQRGVHCGSTGESADLWRPCSKR*FFRASV
Trigger: CACAGAGGCCCTGAAGAAGCACCGCTTTGAGCAGGG...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGCCCTGCTCAAAGCGGTaGTTCTTCAGGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVPCSKR*FFRASV
Trigger: CACAGAGGCCCTGAAGAAGCACCGCTTTGAGCAGGG...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGCCGCCGGTGCTGCTaGATGCAACGGCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLSRRCC*MQRLCL
Trigger: TAAACAGAGCCGTTGCATGCAGCAGCACCGGCGGCT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTTGAGCCGCCGGTGCTaGTGCATGCAACGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSLSRRC*CMQRLC
Trigger: ACAGAGCCGTTGCATGCAGCAGCACCGGCGGCTCAA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATATGCTGCTGCCTCCGGTaGTCATCCAGAGCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSICCCLR*SSRASR
Trigger: CCGACTGGCTCTGGATGAGCACCGGAGGCAGCAGCA...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCACTTGTAGAGACGAGTaGCCCCATGCCCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLTCRDE*PHALSH
Trigger: ATGTGAAAGGGCATGGGGGCACTCGTCTCTACAAGT...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACATGTAAGCACAATCGGTaGACTTGTAGAGACGAGTGC +
Preference number: 4 (lower is better)
Translates to: LLQQVGAEAALLLEASPTCKHNR*TCRDEC
Trigger: GCACTCGTCTCTACAAGTGCACCGATTGTGCTTACA...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCTCTGTCGGTTCTTGGTaGTGTAAGCACAATCGGTGC +
Preference number: 4 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTSVGSW*CKHNRC
Trigger: GCACCGATTGTGCTTACAGCACCAAGAACCGACAGA...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCATCAGCCCGGTTGGTaGAGTACTCACACTCGGGAC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLHQPGW*STHTRD
Trigger: GTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGGCCTCACTGTGCTTaGGAAGGTGGGTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSWPHCA*EGGCAA
Trigger: TGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCGCTTGGCCTTGTAGTTaGAGAGGCGGCAAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIAWPCS*RGGKRR
Trigger: CCTTCTTTTGCCGCCTCTGCAACTACAAGGCCAAGC...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTGGTGCCTGCGTACGTaGTTGACCACCTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYWCLRT*LTTWNF
Trigger: AAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGCACATCATGCAGGTaGACTGTGGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSCTSCR*TVGVVG
Trigger: CCCCACCACCCCCACAGTGCACCTGCATGATGTGCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATCCCAGGAGACCTCTTaGATGTGCTACATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPSQETS*MCYIGR
Trigger: CCTTCCTATGTAGCACATGCAAGAGGTCTCCTGGGA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGTCCCCCACTGGACTaGTTCCTCCTTAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLSPPLD*FLLSPT
Trigger: AGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCACCGCCACATTCACCTaGTGTCCAAAGATGGCATCA +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGTATFT*CPKMAS
Trigger: TGATGCCATCTTTGGACAGCAGGTGAATGTGGCGGT...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTCTGAGACAGAGTCTTaGTCTGCTGCAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQASETES*SAAGWS
Trigger: ACTCCAGCCTGCAGCAGAGCAAGACTCTGTCTCAGA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACTGGCACACAGGAAGTaGTATAAAAGAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPLAHRK*YKRGWL
Trigger: CAGCCAGCCTCTTTTATAGCACTTCCTGTGTGCCAG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGAGGTAGGAGACAGGTaGGCACCAGAGAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPEVGDR*APEKKY
Trigger: GTATTTCTTCTCTGGTGCCCACCTGTCTCCTACCTC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GCAGTGAATGGGCAGAGGCTGCAGTGCAGCTCTCCAGACTCCTCGAGGGGGCAGATATTATCGCTGTTCTaGGGAATCTTCAAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: AVNGQRLQCSSPDSSRGQILSLF*GIFKLD
Trigger: GTCAAGCTTGAAGATTCCCCAGAACAGCGATAATAT...CTGCCCCCTCGAGGAGTCTGGAGAGCTGCACTGCAGCCTCTGCCCATTCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCCTCTTCAGTTGCTGTaGCCTCTACCAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLPLQLL*PLPAGS
Trigger: GCTGCCTGCTGGTAGAGGCCACAGCAACTGAAGAGG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGATCTCCATGTTCCCTaGTCCCTCTTCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPDLHVP*SLFSCC
Trigger: ACAGCAACTGAAGAGGGACCAGGGAACATGGAGATC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGTTTTGGGAGTCCTTCTaGGTGTCACTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQFWESF*VSLFSS
Trigger: AGAAGAGAAGAGTGACACCCAGAAGGACTCCCAAAA...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGGCAGCGCTTACACTCTaGACACATATGGGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGAALTL*THMGLE
Trigger: TTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGC...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTAGCTCCCGCAGCAGATaGGTCTTGAGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQASSRSR*VLSLLL
Trigger: TAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCT...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVTVVAQ*AVVGLF
Trigger: GAAAAGGCCCACCACTGCCCACTGTGCCACTACAGT...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGCTGTGGCAAAGAGCATaGGACATGAGTGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVLWQRA*DMSDGG
Trigger: GCCGCCATCACTCATGTCCCATGCTCTTTGCCACAG...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGSSLPG*PCFLCL
Trigger: TAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSASSLPG*PCFLCL
Trigger: TAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGA...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTATGAGCACCCTCTTGTaGGCAGTGGCAAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAMSTLL*AVAKLH
Trigger: GTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGTGTAATCCTTGGTGTTaGAGTGGGTCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGCNPWC*SGSACA
Trigger: AGCACATGCTGACCCACTCCAACACCAAGGATTACA...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTTGCTTGCAGTTCTCATaGCTCAGCACAGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSCLQFS*LSTACL
Trigger: CAAGCAGGCTGTGCTGAGCCATGAGAACTGCAAGCA...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGATCTCTGGCAGGGCCTaGTCCAAGCTGGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLISGRA*SKLGST
Trigger: GGTGGACCCCAGCTTGGACCAGGCCCTGCCAGAGAT...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGACCTCCTCAAGGGGTaGCTCAGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLDLLKG*LSHRLQ
Trigger: CTGGAGTCTGTGACTGAGCCACCCCTTGAGGAGGTC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCAGGATGGAGGATTTGTaGAGGGCTCAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIRMEDL*RAQTLA
Trigger: AGCCAGTGTCTGAGCCCTCCACAAATCCTCCATCCT...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCTCTTCTGTTTCTTCTaGCTCCCTGGGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVLFCFF*LPGKLQ
Trigger: TTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAGAG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGGGTGCCTCCGCTTCTaGTGGAGCCTTAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSGCLRF*WSLKAV
Trigger: CACTGCCTTAAGGCTCCACCAGAAGCGGAGGCACCC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCAGGGCTGGGGCTGCAGTaGGGTGCCTCCGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPGLGLQ*GASASG
Trigger: ACCAGAAGCGGAGGCACCCCACTGCAGCCCCAGCCC...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGGGCTGGGGCTGCAGTaGGGTGCCTCCGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKGLGLQ*GASASG
Trigger: ACCAGAAGCGGAGGCACCCCACTGCAGCCCCAGCCC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTACCGGTACCGTCTGGTaGTCGAAAAGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQATGTVW*SKSHRR
Trigger: CCTTCTGTGACTTTTCGACCACCAGACGGTACCGGT...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAACTGGGCTTCACACTaGGAGCAGGCAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLNWASH*EQAKAG
Trigger: CCCAGCCTTTGCCTGCTCCCAGTGTGAAGCCCAGTT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCTTGTGGATCCGCATGTaGTACTTGAGACGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLLWIRM*YLRREG
Trigger: TCCCTCTCGTCTCAAGTACCACATGCGGATCCACAA...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTTCCGTTCCTCCTTGTaGATCCGCATGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGFRSSL*IRMWYL
Trigger: CAAGTACCACATGCGGATCCACAAGGAGGAACGGAA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTGCACACATAGGGTTTaGCCTCACTGTGCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVCTHRV*PHCACE
Trigger: TTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAACGTGCTTGACCACCTaGAACTTTTGCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPTCLTT*NFCLAL
Trigger: CAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGCCCACACCCTGGTTTaGGTCGGCTTGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIAHTLV*VGLVRV
Trigger: CACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCAGGAGCAGGAGGGCTaGGATCCTCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSQEQEG*DPPAAH
Trigger: ATGTGCAGCTGGAGGATCCCAGCCCTCCTGCTCCTG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCTTCCTATACAGGAGGTaGGGCAGGCTTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESFLYRR*GRLSAL
Trigger: GAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAA...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACACCGTGCCCGGCCTTTaGGTGCATTTTAAATTGCAG +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDTVPGL*VHFKLQ
Trigger: CTGCAATTTAAAATGCACCCAAAGGCCGGGCACGGT...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CAA 72 bp ACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCCATCACCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TCRAGEASPLLL*NQNCIPITRAG
Trigger: TCCAGCTCTGGTGATGGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp GTGGTGCCTGCGTACGTGCTTGACCACCTGGAACTTTaGCTTGGCCTTGTAGTTGCAGAGGCGGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: VVPAYVLDHLEL*LGLVVAEAAKE
Trigger: TTCTTTTGCCGCCTCTGCAACTACAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGGTAAGCCACTGGGTTaGAGGTGGCAAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSGKPLG*RWQRGR
Trigger: TCTGCCCCTTTGCCACCTTCAACCCAGTGGCTTACC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGTCACGTCTCGGCATGTaGAGTCACACAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARSRLGM*SHTAHT
Trigger: AGTGTGAGCTGTGTGACTTCACATGCCGAGACGTGA...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCCTGTCTTCCAGTGTTaGCCTCCTCACTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNPVFQC*PPHSSL
Trigger: CAGAGATGAGTGAGGAGGTCAACACTGGAAGACAGG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCCAGCCTTCAGCCACGTaGGAGGTAATAGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISQPSAT*EVIEES
Trigger: GCTCTCCTCTATTACCTCTCACGTGGCTGAAGGCTG...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCACACTGCTCACACATaGAAGCCCGTGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNHTAHT*KPVLLD
Trigger: ATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACGGCGGTCGGTGTGGGTaGGGGCATGATGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYGGRCG*GHDGAG
Trigger: GCCTGCGCCATCATGCCCTCACCCACACCGACCGCC...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATCCCATCAACTCTGTGTaGAGGCAGGTTGCAACTAGA +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDPINSV*RQVATR
Trigger: TCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGG...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGGGTGCTGCAGACCCTTaGGATCTTCAGCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARGAADP*DLQQRT
Trigger: TGTTCTCTGCTGAAGATCGCAAGGGTCTGCAGCACC...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCATGTGGCGGTTGAGTaGATTCCTCTCCACCGCACT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLHVAVE*IPLHRT
Trigger: AGTGCGGTGGAGAGGAATGCACTCAACCGCCACATG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATTGGAAATATCTTCATaGATGCTGGCCATGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPLEISS*MLAMWR
Trigger: CCGCCACATGGCCAGCATGCATGAAGATATTTCCAA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYEAMCF*SSYFRL
Trigger: CAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCACGGAGGCGGGTATaGTTGCAGTTCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: DQRGVHCGSTGESADLWRSRRRV*LQFSWL
Trigger: GAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGA...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATGGGGGTGTTGGGCCCTaGATGGCCCCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDGGVGP*MAPSGS
Trigger: GGAGCCAGAAGGGGCCATGCAGGGCCCAACACCCCC...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCATGGGGAGCCTCACTaGCCTCCTGTCTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSHGEPH*PPVFQC
Trigger: ACACTGGAAGACAGGAGGGCAGTGAGGCTCCCCATG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCCTGGGAGCACAGGTTaGAGAGGGATGGGTGAATCT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLPGSTG*RGMGES
Trigger: AGATTCACCCATCCCTCTGCAACCTGTGCTCCCAGG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGGGCTGCAGTGGGGTaGCTCCGCTTCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGAAVG*LRFWWS
Trigger: GCTCCACCAGAAGCGGAGGCACCCCACTGCAGCCCC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGCTTCACCCCCTCGTaGTTGAGCCGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGFTPS*LSRRCC
Trigger: GCAGCACCGGCGGCTCAAGCACGAGGGGGTGAAGCC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTCACTCAAGCCGTGGGTaGTGTTTACGGGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: DQRGVHCGSTGESADLWRHSSRG*CLRVCP
Trigger: AGGACACACCCGTAAACAGCACCCACGGCTTGAGTG...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGTGTGGATGCGGCTGTaGCAGGTGATCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSVWMRL*QVIFCR
Trigger: CCGACAGAAGATCACCTGGCACAGCCGCATCCACAC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGCTGGTGCACACGCAGTaGATCAGCCCGGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKLVHTQ*ISPVGA
Trigger: TGCACCAACCGGGCTGATGCACTGCGTGTGCACCAG...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGGTTTGGCCTCACTGTaGTTGCGAAGGTGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIGLASL*LRRWVR
Trigger: GCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTACCAGCAGGCAGCCTaGCTCAGTAGGTATAGGTGC +
Preference number: 4 (lower is better)
Translates to: DQRGVHCGSTGESADLWRYQQAA*LSRYRC
Trigger: GCACCTATACCTACTGAGCCAGGCTGCCTGCTGGTA...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTTGCACAGGCTGTATATaGGTCTCACTGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFCTGCI*VSLHWC
Trigger: GCACCAGTGCAGTGAGACCCATATACAGCCTGTGCA...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCACAGCAGCTCCTGGGATaGAAGGCCCTGAACGGCAGA +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAQQLLG*KALNGR
Trigger: TCTGCCGTTCAGGGCCTTCCATCCCAGGAGCTGCTG...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTTATCCACAGCCTTTTaGGAGTCCTTCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVLSTAF*ESFWVS
Trigger: TGACACCCAGAAGGACTCCCAAAAGGCTGTGGATAA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCTGCATGCTGGCCATGTaGCGGTTGAGTGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISCMLAM*RLSAFL
Trigger: GAGGAATGCACTCAACCGCCACATGGCCAGCATGCA...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCGGAATAGGTGCTTATTaGAACAAGCAAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: KARPSPWITTICTRPSSTGIGAY*NKQNHS
Trigger: ACTGTGATTTTGCTTGTTCCAATAAGCACCTATTCC...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTCTTCACTGCCAGGGTaGCCCTGCTTCTTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYSSLPG*PCFLCL
Trigger: TAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGTGTTGGGCCCTGCATaGCCCCTTCTGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTVLGPA*PLLAPG
Trigger: GCCAGGAGCCAGAAGGGGCCATGCAGGGCCCAACAC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATATCCTTCCAGTCCATCTaGCCCTTCCAGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSISFQSI*PFQSQG
Trigger: CCCCTGGGACTGGAAGGGCCAGATGGACTGGAAGGA...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGGGAGGGCTCAGACACTaGCTTTTCCAGAAGGGGATT +
Preference number: 4 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVGGLRH*LFQKGI
Trigger: AATCCCCTTCTGGAAAAGCCAGTGTCTGAGCCCTCC...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTGCTGTCTCAGCAGGTaGAGTTGTCTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQACCLSR*SCLEGS
Trigger: GGAACCTTCAAGACAACTCCACCTGCTGAGACAGCA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTTGCTGTCTCAGCAGGTaGAGTTGTCTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSCCLSR*SCLEGS
Trigger: GGAACCTTCAAGACAACTCCACCTGCTGAGACAGCA...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTTGGGTGAATCTGGTCTaGGCAAGCCCTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSWVNLV*ASPCSF
Trigger: GAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCA...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGGGAACCAGAGACTGTaGCAAGAGGCTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYGNQRL*QEALLF
Trigger: AAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGCCTCCGCTTCTGGTaGAGCCTTAAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSCLRFW*SLKAVA
Trigger: TGCCACTGCCTTAAGGCTCCACCAGAAGCGGAGGCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACACCGGTACCGTCTGGTaGTCGAAAAGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNTGTVW*SKSHRR
Trigger: CCTTCTGTGACTTTTCGACCACCAGACGGTACCGGT...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTCACACTCGGGACACTaGTATGGCTTCAGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYSHSGH*YGFSPV
Trigger: TACAGGACTGAAGCCATACCAGTGTCCCGAGTGTGA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGCGATGCCGGGTCTCCTaGTGCACACGCAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLRCRVS*CTRSAS
Trigger: TGATGCACTGCGTGTGCACCAGGAGACCCGGCATCG...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCATGGTTTGGGTCGGCTTaGTCAGGGTGGTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAWFGSA*SGWCLR
Trigger: ACGCAGGCACCACCCTGACCAAGCCGACCCAAACCA...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACTGGCTGGAACCATCCTaGTTTATGTCTGTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDWLEPS*FMSVVP
Trigger: TGGGACAACAGACATAAACCAGGATGGTTCCAGCCA...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAGAGGTACAAGGGTTGTaGGGACATCTGGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GSTGESADLWRSSRHSTAEVQGL*GHLGSQ
Trigger: CTGACTACCCAGATGTCCCCACAACCCTTGTACCTC...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCCTCAAAGTCCCCCACTaGACTGCTTCCTCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISLKVPH*TASSLA
Trigger: GGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAG...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATACGGGGAGAAACATCTaGAAGGATGCTCGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDTGRNI*KDAREN
Trigger: GTTCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGT...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATAGCAACTCCCCAAAGTaGACAAGACCAAAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDSNSPK*TRPKRG
Trigger: ACCCCTCTTTGGTCTTGTCCACTTTGGGGAGTTGCT...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGTGGGGTAGAGTGGCGTaGGCTTCTCTGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLWGRVA*ASLWVW
Trigger: CCACACCCACAGAGAAGCCCACGCCACTCTACCCCA...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450765.5
CDS-3UTR CCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGAGCTCTGGGGTAGAGTaGCGTGGGCTTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKSSGVE*RGLLCG
Trigger: CCCACAGAGAAGCCCACGCCACTCTACCCCAGAGCT...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450765.5
3UTR CAA 72 bp TTAAAGCAGCGCTTACACTCTGGACACATATGGGTCTaGAAGAGGGACTCGGTGCCAGAGACCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: LKQRLHSGHIWV*KRDSVPETTSP
Trigger: AGGGGATGTGGTCTCTGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp TTTTCACCCAGCTCCCGCAGCAGATGGGTCTTGAGCTaGCTCTTACTGGTGAAGAACTTCTGGCAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: FSPSSRSRWVLS*LLLVKNFWQLG
Trigger: CCCTAACTGCCAGAAGTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCTGGGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp CAGCGCAGCTCTTCACTGCCAGGGTGGCCCTGCTTCTaGTGTTTACGGAATAGGTGCTTATTGGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: QRSSSLPGWPCF*CLRNRCLLEQA
Trigger: TGCTTGTTCCAATAAGCACCTATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAGTGAAGAGCTGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
3UTR CAA 72 bp TGCAGAGGGATGGGTGAATCTGGTCTGGGCAAGCCCTaGTTCTTTCTGAGTAGAACAGGGCACTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CRGMGESGLGKP*FFLSRTGHFFS
Trigger: GCTGAAGAAGTGCCCTGTTCTACTCAGAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCATCCCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAACAGTCCCAGGTTCGTaGCCTGGCCCCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGTVPGS*PGPSGR
Trigger: CCGACCTGAGGGGCCAGGTCACGAACCTGGGACTGT...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCCAGGTGGAGTTGTCTTaGAGGTTCCTACCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFQVELS*RFLPSC
Trigger: ACAACTGGGTAGGAACCTTCAAGACAACTCCACCTG...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGTTGCAGAGGGATGGGTaGATCTGGTCTGGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKLQRDG*IWSGQA
Trigger: GGCTTGCCCAGACCAGATTCACCCATCCCTCTGCAA...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTCACCCCCTCGTGCTTaGGCCGCCGGTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRSPPRA*AAGAAA
Trigger: TGCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCGGTATTTCAGCTGGTTaGCCCACTTGCACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFGISAG*PTCTCS
Trigger: GCTACAAGTGCAAGTGGGTCAACCAGCTGAAATACC...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCACACTGCTCACACATaGAAGCCCGTGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLHTAHT*KPVLLD
Trigger: ATCGAGAAGCACGGGCTTTCATGTGTGAGCAGTGTG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTGCAGGAAGCGCGTCTTaGAGGCCTTGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: VVLPLGDIATFSAHVILGAGSAS*RPCHTA
Trigger: AGCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGC...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSSFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCATCTTCTTAACTCCCTaGAAGAGGGGCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISIFLTP*KRGWKA
Trigger: GGCCTTCCAGCCCCTCTTTCAGGGAGTTAAGAAGAT...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCCCCTTTTACAGGCAATaGGTTTGTGCAGCACAATAC +
Preference number: 4 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGPFYRQ*VCAAQY
Trigger: GTATTGTGCTGCACAAACTCATTGCCTGTAAAAGGG...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCAGTAGAGAGGCACAGTaGAACTTTCTGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESSREAQ*NFLEPA
Trigger: AGCTGGCTCCAGAAAGTTTCACTGTGCCTCTCTACT...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTAGGGCAGAGGAGTTATaGATAGTGGCTCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFRAEEL*IVAQGS
Trigger: AGACCCTTGAGCCACTATTCATAACTCCTCTGCCCT...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACCGGGGCCCGCTTTGTaGGACCGCCTCCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLPGPAL*DRLRLS
Trigger: GCTGAGCCGGAGGCGGTCGCACAAAGCGGGCCCCGG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTCTTCAGCTGTCTCCTaGCCAGGCAAGGGTGTACCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSSSAVS*PGKGVP
Trigger: AGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIVWLLR*SFRAWL
Trigger: CAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACAC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCTCTGCTGCGGCTGCTaGCGTGTGGCTCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLCCGC*RVALEV
Trigger: CACCTCAAGAGCCACACGGCAGCAGCCGCAGCAGAG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCTTGCGGTCGGGTGCTaGATAGCTGCAGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLAVGC*IAAALL
Trigger: CAGGAGGGCTGCAGCTATGCAGCACCCGACCGCAAG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACCATGAGCATGCATCTTaGCTACATGATCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDHEHAS*LHDPGK
Trigger: CTTACCAGGATCATGTAGGCAAGATGCATGCTCATG...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGGAGGCGGGTATGCTTaGAGTTCTCATGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSGGGYA*SSHGSA
Trigger: TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTGGTGTAGTGTGCAGCTaGCCTCCTCCACCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VVLPLGDIATFSAHVILGGVVCS*PPPPLL
Trigger: CAGCAGAGGTGGAGGAGGGCAGCTGCACACTACACC...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGCCTCTAGGTGTAGTGTaGAGCTGCCCTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLPLGVV*SCPPPP
Trigger: AGGTGGAGGAGGGCAGCTGCACACTACACCTAGAGG...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCTCAGAGCCCGTTCCTaGTGGCAGCTAAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSLRARS*WQLKGH
Trigger: ATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCTGAG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACCCCACGGGCTGGGGCTaGAGTGGGGTGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNPTGWG*SGVPPL
Trigger: AAGCGGAGGCACCCCACTGCAGCCCCAGCCCGTGGG...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTGCTTGAGCCGCCGGTaGTGCTGCATGCAACGGCTC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTCLSRR*CCMQRL
Trigger: GAGCCGTTGCATGCAGCAGCACCGGCGGCTCAAGCA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGAGGGGATGCGGCCAATaGCTGTGTGTCGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRRGCGQ*LCVGTG
Trigger: ACCAGTCCCGACACACAGGCATTGGCCGCATCCCCT...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCTGTACCCTTAACCGGTaGAAGCGCAGTTTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFCTLNR*KRSFEL
Trigger: CAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACA...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTGTCGGCGCAGAGCATaGTGCTTAAGTGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLCRRRA*CLSAVS
Trigger: AGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGTGCTGCTGCCTCCGGTaGTCATCCAGAGCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKCCCLR*SSRASR
Trigger: CCGACTGGCTCTGGATGAGCACCGGAGGCAGCAGCA...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCACTTGTAGAGACGAGTaGCCCCATGCCCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFTCRDE*PHALSH
Trigger: ATGTGAAAGGGCATGGGGGCACTCGTCTCTACAAGT...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGTCTGTCGGTTCTTGGTaGTGTAAGCACAATCGGTGC +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARSVGSW*CKHNRC
Trigger: GCACCGATTGTGCTTACAGCACCAAGAACCGACAGA...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGGCTTCAGTCCTGTATaGTTGGTCATGTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVGFSPV*LVMWYF
Trigger: GAAATACCACATGACCAAGCATACAGGACTGAAGCC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCTGGGATCCTCCAGCTaGACATCATGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSLGSSS*TSCRCT
Trigger: AGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGTTTCCGGGTGCTGGTaGCTGAACTTGCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIVSGCW*LNLPCC
Trigger: GCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAAC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCTTTTGGGAGTCCTTCTaGGTGTCACTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVFWESF*VSLFSS
Trigger: AGAAGAGAAGAGTGACACCCAGAAGGACTCCCAAAA...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCGCAGCGCTTACACTCTaGACACATATGGGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIAALTL*THMGLE
Trigger: TTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGC...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAGCTCCCGCAGCAGATaGGTCTTGAGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISSSRSR*VLSLLL
Trigger: TAAGAGCAAGCTCAAGACCCATCTGCTGCGGGAGCT...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGACAGCCCGCACCCCATaGGTCTCCTTCAGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKTARTP*VSFRCL
Trigger: TAAGCACCTGAAGGAGACCCATGGGGTGCGGGCTGT...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLILVSH*VEGGKG
Trigger: CCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGAT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGGGGTCAGCATGTGCTTaGATAGGTAGCTCACGTCTC +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVGSACA*IGSSRL
Trigger: GAGACGTGAGCTACCTATCCAAGCACATGCTGACCC...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTGTAATCCTTGGTGTTaGAGTGGGTCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYCNPWC*SGSACA
Trigger: AGCACATGCTGACCCACTCCAACACCAAGGATTACA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGCCGGTGTGCCAGGGTaGTGCTGGGAAGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGAGVPG*CWEAMC
Trigger: GCACATGGCTTCCCAGCACCACCCTGGCACACCGGC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGGTCGGGCTGACAGCTaGTTTGAGGGCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSGRADS*FEGSES
Trigger: AGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCTGGGTGAATCTGGTCTaGGCAAGCCCTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFWVNLV*ASPCSF
Trigger: GAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCA...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGACATCAGGCTGGGTCTaGGGGGTCCCTCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLTSGWV*GVPRFP
Trigger: AGGAAAACGAGGGACCCCCCAGACCCAGCCTGATGT...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGAGCCCGTTCCTGCTaGCAGCTAAAGGGACATGTA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLRARSC*QLKGHV
Trigger: TACATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGTGCCTCCGCTTCTGGTaGAGCCTTAAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKCLRFW*SLKAVA
Trigger: TGCCACTGCCTTAAGGCTCCACCAGAAGCGGAGGCA...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCATTGGTACCAAACGTCTaGGGGCAAGAGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPALVPNV*GQELQG
Trigger: CCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAA...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGACTATAGTCACAAAGTaGACAGAAGTGGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGTIVTK*TEVGRC
Trigger: ACACCTACCCACTTCTGTCCACTTTGTGACTATAGT...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATGCAGGGGGCCCTCAGTaGTCTCTGCAGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDAGGPQ*SLQESQ
Trigger: CTGGCTCTCCTGCAGAGACCACTGAGGGCCCCCTGC...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCATTGTGGATCCGCATGTaGTACTTGAGACGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSTGESADLWRSSRHSTALWIRM*YLRREG
Trigger: TCCCTCTCGTCTCAAGTACCACATGCGGATCCACAA...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGTATGCTTGGTCATGTaGTATTTCAGCTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVVCLVM*YFSWLT
Trigger: GGTCAACCAGCTGAAATACCACATGACCAAGCATAC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCCCTGGAACTTTTGCTTaGCCTTGTAGTTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFPGTFA*PCSCRG
Trigger: GCCTCTGCAACTACAAGGCCAAGCAAAAGTTCCAGG...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCACGTGCTTGACCACCTaGAACTTTTGCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFTCLTT*NFCLAL
Trigger: CAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGT...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCGGTCAAGGGTCAAGATaGCTCAAGGACAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISGQGSR*LKDREK
Trigger: CTTCTCCCTGTCCTTGAGCCATCTTGACCCTTGACC...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAACATGGGAGGCAGTGTaGAACAGTACAAAGAATCCT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPTWEAV*NSTKNP
Trigger: AGGATTCTTTGTACTGTTCCACACTGCCTCCCATGT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTAGGAGACCAACTATGTaGAGAACAATGGTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVRRPTM*RTMVRN
Trigger: GTTTCTCACCATTGTTCTCCACATAGTTGGTCTCCT...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGCACCATGGCTCCGCTaGTGCTGCCGGAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKAPWLR*CCRKSL
Trigger: CAAACTCTTCCGGCAGCATCAGCGGAGCCATGGTGC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCACAGGCATAGGTGTCTaGGTAGAAGTTGGAAATATC +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVTGIGV*VEVGNI
Trigger: GATATTTCCAACTTCTACTCAGACACCTATGCCTGT...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTCACGTCTCGGCATGTaGAGTCACACAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSSRLGM*SHTAHT
Trigger: AGTGTGAGCTGTGTGACTTCACATGCCGAGACGTGA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCAGGTGGAGTTGTCTTaGAGGTTCCTACCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLQVELS*RFLPSC
Trigger: ACAACTGGGTAGGAACCTTCAAGACAACTCCACCTG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGTCTTTCCTTAGGCTCTaGGCTCCTCAGGCTAGCGCT +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLSFLRL*APQASA
Trigger: AGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGA...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAGTGGGGGTAGGAGCATaGTTAGTTTTCCTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: GSTGESADLWRSSRHSTAVGVGA*LVFLLV
Trigger: GACTAGAAGGAAAACTAATCATGCTCCTACCCCCAC...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCTTGAGCCCAGGAGTTTaGGACCAGTCTGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISLSPGV*DQSETG
Trigger: ACCAGTTTCAGACTGGTCTCAAACTCCTGGGCTCAA...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGCTGGAGAGAAGGGTaGAGAGTAGGCATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSCWREG*RVGMVL
Trigger: AAGGACCATGCCTACTCTTCACCCTTCTCTCCAGCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCCCTGGTTATCTACTTaGAGTCTGTCTCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESPWLST*SLSHSA
Trigger: TGCGGAATGAGACAGACTTCAAGTAGATAACCAGGG...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGTCTCACTGCACTGGTaGAGGGCCAGCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGVSLHW*RASRVG
Trigger: GCCCACTCTGCTGGCCCTGCACCAGTGCAGTGAGAC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATATGCCTCAGGTGGTGCTaGAGACCCTTGCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSICLRWC*RPLRSS
Trigger: TGAAGATCGCAAGGGTCTGCAGCACCACCTGAGGCA...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCTTGGAAATATCTTCATaGATGCTGGCCATGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESLEISS*MLAMWR
Trigger: CCGCCACATGGCCAGCATGCATGAAGATATTTCCAA...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGGCCTTGCGGTCGGGTaGTGCATAGCTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRGLAVG*CIAAAL
Trigger: GAGGGCTGCAGCTATGCAGCACCCGACCGCAAGGCC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGAAACG*SADQPG
Trigger: ACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCCATAGCCATGGGCCTTaGGTTTATGGAACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFHSHGP*VYGTRV
Trigger: CACTCTTGTTCCATAAACGCAAGGCCCATGGCTATG...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCAGTTGCAGTGAAACTTaGCCTGCTCAAAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPASCSET*PAQSGA
Trigger: AGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACT...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGTTGCAGTGAAACTTaGCCTGCTCAAAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLSCSET*PAQSGA
Trigger: AGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGGAATGGGCAGGAGTTaGAGTGAAACTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSGMGRS*SETCPA
Trigger: AGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCC...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCTGTACCCTTAACCGGTaGAAGCGCAGTTTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISCTLNR*KRSFEL
Trigger: CAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACA...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCATGGCTGAAATGCTGCTaGCTCCGGTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAWLKCC*LRCSSR
Trigger: TCTGGATGAGCACCGGAGGCAGCAGCATTTCAGCCA...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTACTTGTAGAGACGAGTaGCCCCATGCCCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: DQRGVHCGSTGESADLWRTCRDE*PHALSH
Trigger: ATGTGAAAGGGCATGGGGGCACTCGTCTCTACAAGT...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGGCTTCAGTCCTGTATaGTTGGTCATGTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAGFSPV*LVMWYF
Trigger: GAAATACCACATGACCAAGCATACAGGACTGAAGCC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCACGGTGGCACACATTaGACACATAGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSHGGTH*THRVWP
Trigger: AGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAGAGACCTCTTGCATGTaGTACATAGGAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GSTGESADLWRSSRHSTAETSCM*YIGRTQ
Trigger: CTGTGTCCTTCCTATGTAGCACATGCAAGAGGTCTC...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCAAACATCTGGAAGGATaGTCGAGAGAACAAATGGAG +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVKHLEG*SREQME
Trigger: CTCCATTTGTTCTCTCGAGCATCCTTCCAGATGTTT...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATATCTTTGTGTATATCTaGATCCAGGAAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYIFVYI*IQEGLE
Trigger: CTCCAGGCCTTCCTGGATGCAGATATACACAAAGAT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCAATGATCTTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAMILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCAT...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAATATTATCGCTGTTCTaGGGAATCTTCAAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKILSLF*GIFKLD
Trigger: GTCAAGCTTGAAGATTCCCCAGAACAGCGATAATAT...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTTTTGGGAGTCCTTCTaGGTGTCACTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYFWESF*VSLFSS
Trigger: AGAAGAGAAGAGTGACACCCAGAAGGACTCCCAAAA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCGCAGCGCTTACACTCTaGACACATATGGGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFAALTL*THMGLE
Trigger: TTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGC...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTGGGGTCTGGGAAGTaGAGATGCAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKLGSGK*RCRCST
Trigger: GGTGGAGCACCTGCATCTCCACTTCCCAGACCCCAG...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCTGGAGGCTGGGGTCTaGGAAGTGGAGATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLEAGV*EVEMQV
Trigger: CACCTGCATCTCCACTTCCCAGACCCCAGCCTCCAG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTGGCACAGTGGGCAGTaGTGGGCCTTTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTWHSGQ*WAFSPS
Trigger: GCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGTGGCACAGTGGGCAGTaGTGGGCCTTTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKWHSGQ*WAFSPS
Trigger: GCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCA...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATATGCTCCTTTAGGGCCTaGCTGAGGCGGAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSICSFRA*LRRNSS
Trigger: TGAGGAATTCCGCCTCAGCCAGGCCCTAAAGGAGCA...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCGCGGCTGCTGCCGTGTaGCTCTTGAGGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFAAAAV*LLRCSF
Trigger: AAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGC...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCGGAATAGGTGCTTATTaGAACAAGCAAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: RSASARLVQYSHSGHWYGGIGAY*NKQNHS
Trigger: ACTGTGATTTTGCTTGTTCCAATAAGCACCTATTCC...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTATGAGCACCCTCTTGTaGGCAGTGGCAAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSMSTLL*AVAKLH
Trigger: GTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGCTTGCAGTTCTCATaGCTCAGCACAGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSCLQFS*LSTACL
Trigger: CAAGCAGGCTGTGCTGAGCCATGAGAACTGCAAGCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTAGGATGGAGGATTTGTaGAGGGCTCAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSRMEDL*RAQTLA
Trigger: AGCCAGTGTCTGAGCCCTCCACAAATCCTCCATCCT...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCGTGTCCTCTGAGGCCTaGGTACCTGGGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFVSSEA*VPGSTG
Trigger: ACCTGTGCTCCCAGGTACCCAGGCCTCAGAGGACAC...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCTCTTCTGTTTCTTCTaGCTCCCTGGGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLLFCFF*LPGKLQ
Trigger: TTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAGAG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGGGAACCAGAGACTGTaGCAAGAGGCTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLGNQRL*QEALLF
Trigger: AAACAGAAGAGCCTCTTGCCACAGTCTCTGGTTCCC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCTAACCGGTACCGTCTaGTGGTCGAAAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLLTGTV*WSKSHR
Trigger: TCTGTGACTTTTCGACCACCAGACGGTACCGGTTAG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCAAGCGCAGTTTCGAGTTaGTACCAAACGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPASAVSS*YQTSGG
Trigger: GCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCT...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCCGATGCCGGGTCTCCTaGTGCACACGCAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFRCRVS*CTRSAS
Trigger: TGATGCACTGCGTGTGCACCAGGAGACCCGGCATCG...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCCCTGGAACTTTTGCTTaGCCTTGTAGTTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPAPGTFA*PCSCRG
Trigger: GCCTCTGCAACTACAAGGCCAAGCAAAAGTTCCAGG...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCACGTGCTTGACCACCTaGAACTTTTGCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLTCLTT*NFCLAL
Trigger: CAAGGCCAAGCAAAAGTTCCAGGTGGTCAAGCACGT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGGAAAGTGCAGATCTTTaGCGTTCGTCTAGACACAGC +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARESADL*RSSRHS
Trigger: GCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTC...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCACAGTGAAACTTTCTaGAGCCAGCTTCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARHSETF*SQLQML
Trigger: CAGCATCTGAAGCTGGCTCCAGAAAGTTTCACTGTG...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGGGAGGGAAGTGGGATaGATAGGTTCAGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIGREVG*IGSGLM
Trigger: CATCAGGCCTGAACCTATCCATCCCACTTCCCTCCC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGTCTGTTGTCAGATTGTaGCCCAGGCTCCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARSVVRL*PRLLFP
Trigger: TGGAAATAGGAGCCTGGGCCACAATCTGACAACAGA...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGAGCCAAGGAGGACGCTaGGCCGTCAAGATTAAGAAC +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKSQGGR*AVKIKN
Trigger: GTTCTTAATCTTGACGGCTCAGCGTCCTCCTTGGCT...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGGCCATGTGGCGGTTaGGTGCATTCCTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGWPCGG*VHSSPP
Trigger: CGGTGGAGAGGAATGCACTCAACCGCCACATGGCCA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCCTTTAGGGCCTGGCTaGGGCGGAATTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRPLGPG*GGIPHG
Trigger: GCCGTGAGGAATTCCGCCTCAGCCAGGCCCTAAAGG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGTTGCACTCAGGACACTGGTGGATCTTTTCATGAGCATGCATCTTGCCTACAAAGAGCATGGGACATaGGTGATGGCGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: KVALRTLVDLFMSMHLAYKEHGT*VMAALH
Trigger: GTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTT...GTAGGCAAGATGCATGCTCATGAAAAGATCCACCAGTGTCCTGAGTGCAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACTGGTGGATCTTTTCATaGGCATGCATCTTGCCTACA +
Preference number: 4 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNWWIFS*ACILPT
Trigger: TGTAGGCAAGATGCATGCTCATGAAAAGATCCACCA...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGCCTGTCTTCCAGTGTTaGCCTCCTCACTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKPVFQC*PPHSSL
Trigger: CAGAGATGAGTGAGGAGGTCAACACTGGAAGACAGG...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACCAGCCCCGGATCTGGTaGGTCCTCAGAGCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNQPRIW*VLRARS
Trigger: GGAACGGGCTCTGAGGACTCACCAGATCCGGGGCTG...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGGGCTCTGTTTACAGGTaGAGCCACAGTCCCCACACT +
Preference number: 4 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRGSVYR*SHSPHT
Trigger: AGTGTGGGGACTGTGGCTTCACCTGTAAACAGAGCC...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGCTGACAGCGGTGGCTaGAATGCTGCTGCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRADSGG*NAAASG
Trigger: ACCGGAGGCAGCAGCATTTCAGCCACCGCTGTCAGC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGGCAAAGTCACAGAGCTaGCAGCGGTGGCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRAKSQS*QRWLKC
Trigger: GCATTTCAGCCACCGCTGTCAGCTCTGTGACTTTGC...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCATGCGGCTGTGCCAGGTaGTCTTCTGTCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPCGCAR*SSVGSW
Trigger: CCAAGAACCGACAGAAGATCACCTGGCACAGCCGCA...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTGCGGCTGTGCCAGGTaGTCTTCTGTCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTCGCAR*SSVGSW
Trigger: CCAAGAACCGACAGAAGATCACCTGGCACAGCCGCA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAAGGCCTGGAGGGGGATaGGTCCTGAGGTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGRPGGG*VLRWAF
Trigger: AAATGCCCACCTCAGGACTCATCCCCCTCCAGGCCT...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGCCCTCAGTGGCCATaGATATGCAGACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGPQWP*ICRLQG
Trigger: GCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCACTTCCTCTTGCCGGCTaGCGGGGTACTCTATGTTTT +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPALPLAG*RGTLCF
Trigger: AAAACATAGAGTACCCCGGCAGCCGGCAAGAGGAAG...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCCATCCATCTCCCCGGTaGTACTGGCTGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFHPSPR*YWLAVS
Trigger: ACTCACAGCCAGCCAGTAGCACCGGGGAGATGGATG...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCATCCATCTCCCCGGTaGTACTGGCTGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTHPSPR*YWLAVS
Trigger: ACTCACAGCCAGCCAGTAGCACCGGGGAGATGGATG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTCTCAGTAGGTATAGGTaGAGGGTCCCGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: VVLPLGDIATFSAHVILGLSRYR*RVPGRT
Trigger: TGTCCTTCCCGGGACCCTGCACCTATACCTACTGAG...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGTGGGTCTCCTTCAGGTaGTTAATGAAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLWVSFR*LMKALR
Trigger: CCGCAAGGCCTTCATTAAGCACCTGAAGGAGACCCA...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGTGTTTACGGAATAGGTaGTTATTGGAACAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQCLRNR*LLEQAK
Trigger: TTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACA...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCACAAAGGGGCAGAAGGTaGAGCGCAGCTCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPQRGRR*SAALHC
Trigger: GCAGTGAAGAGCTGCGCTGCACCTTCTGCCCCTTTG...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ATGAGCACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCCATAGCCACATTCAGTaGACATGTAATCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: MSTLLWAVAKLHSGHWWIHSHIQ*TCNPWC
Trigger: ACACCAAGGATTACATGTGCACTGAATGTGGCTATG...GATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACGCCGCAGCTTGTGGCTaGTCAGCTGATCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYAAACG*SADQPG
Trigger: ACCGGGCTGATCAGCTGAGCAGCCACAAGCTGCGGC...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCGGCTTCAGTCCTGTATaGTTGGTCATGTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFGFSPV*LVMWYF
Trigger: GAAATACCACATGACCAAGCATACAGGACTGAAGCC...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCACATCAGCCCGGTTGGTaGAGTACTCACACTCGGGAC +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPHQPGW*STHTRD
Trigger: GTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATG...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCATCAGCCCGGTTGGTaGAGTACTCACACTCGGGAC +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKHQPGW*STHTRD
Trigger: GTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATG...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTACACATGAAAGCCCGTaGTTCTCGATGCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VVLPLGDIATFSAHVILGTHESP*FSMPGL
Trigger: GAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGT...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGCTTGCGAAGGTGGGTaGGCAGCAGGAAGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRACEGG*AAGSAS
Trigger: AGACGCGCTTCCTGCTGCGCACCCACCTTCGCAAGC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATGCTTGGTCAGGGTGGTaGCTGCGTACGTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDAWSGW*LRTCLT
Trigger: GGTCAAGCACGTACGCAGGCACCACCCTGACCAAGC...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGCGCTGGTCCCAGTCTaGACATCTCAGACCATACCC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTALVPV*TSQTIP
Trigger: GGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGGGCAGGAGGGCGCGTaGTCTTGGACAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRGQEGA*SWTDTV
Trigger: GACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTTCTCCCCGGTGCTACTaGCTGGCTGTGAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: VVLPLGDIATFSAHVILGSPRCY*LAVSPK
Trigger: TTTTGGACTCACAGCCAGCCAGTAGCACCGGGGAGA...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTTATCCACAGCCTTTTaGGAGTCCTTCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLLSTAF*ESFWVS
Trigger: TGACACCCAGAAGGACTCCCAAAAGGCTGTGGATAA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCACTCTGGACACATATaGGTCTTGAAGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSHSGHI*VLKRDS
Trigger: CGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGGGTCGGGCTGACAGCTaGTTTGAGGGCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRGRADS*FEGSES
Trigger: AGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACC...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCCTCCTCACTCATCTCTaGCAGGGCCTGGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFLLTHL*QGLVQA
Trigger: AGCTTGGACCAGGCCCTGCCAGAGATGAGTGAGGAG...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGGGTGAATCTGGTCTaGGCAAGCCCTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSWVNLV*ASPCSF
Trigger: GAAAGAACAAGGGCTTGCCCAGACCAGATTCACCCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCAACATCAGGCTGGGTCTaGGGGGTCCCTCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPTSGWV*GVPRFP
Trigger: AGGAAAACGAGGGACCCCCCAGACCCAGCCTGATGT...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTTGGTACCAAACGTCTaGGGGCAAGAGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLVPNV*GQELQG
Trigger: CCCCTGCAGCTCTTGCCCCCAGACGTTTGGTACCAA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTCTTCTGTCGGTTCTTaGTGCTGTAAGCACAATCGG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLSSVGS*CCKHNR
Trigger: CCGATTGTGCTTACAGCACCAAGAACCGACAGAAGA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGATGTGGTATTTCAGCTaGTTGACCCACTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARMWYFS*LTHLHL
Trigger: CAAGTGCAAGTGGGTCAACCAGCTGAAATACCACAT...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGGTATGCTTGGTCATGTaGTATTTCAGCTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARVCLVM*YFSWLT
Trigger: GGTCAACCAGCTGAAATACCACATGACCAAGCATAC...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTACTGTGCTTGCGAAGGTaGGTGCGCAGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLLCLRR*VRSRKR
Trigger: GCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAG...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACCGGCAAAAGAAGGGGTaGCGGTCGGTGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYRQKKG*RSVWVR
Trigger: CCTCACCCACACCGACCGCCACCCCTTCTTTTGCCG...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGCCCACACCCTGGTTTaGGTCGGCTTGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRAHTLV*VGLVRV
Trigger: CACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGGTGCACTGTGGGGGTaGTGGGGTCTTTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRGALWG*WGLCPH
Trigger: GTGTGGGCAAAGACCCCACCACCCCCACAGTGCACC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAAAAATTAGCCTGGCATaGTGGCACATGACTATAGAT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPKISLA*WHMTID
Trigger: ATCTATAGTCATGTGCCACCATGCCAGGCTAATTTT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CAA 72 bp TCAGCAGGTGGAGTTGTCTTGAAGGTTCCTACCCAGTaGTTAGGAGCCTCCTCTAAGGATGGAGGATTTGTG +
Preference number: 4 (lower is better)
Translates to: SAGGVVLKVPTQ*LGASSKDGGFV
Trigger: CACAAATCCTCCATCCTTAGAGGAGGCTCCTAACAACTGGGTAGGAACCTTCAAGACAACTCCACCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCTGGTGGATCTTTTCATaGGCATGCATCTTGCCTACA +
Preference number: 4 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPAWWIFS*ACILPT
Trigger: TGTAGGCAAGATGCATGCTCATGAAAAGATCCACCA...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGTGGTGGATCTTTTCATaGGCATGCATCTTGCCTACA +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVWWIFS*ACILPT
Trigger: TGTAGGCAAGATGCATGCTCATGAAAAGATCCACCA...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGAAGCATGTGTCGGATaGGCACCCTCTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGEACVG*APSCGQ
Trigger: CTGCCCACAAGAGGGTGCTCATCCGACACATGCTTC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGGGCAGGAGTTGCAGTaGAACTTGCCCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKGQELQ*NLPCSK
Trigger: CTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCAGGTATTTCAGCTGGTTaGCCCACTTGCACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAGISAG*PTCTCS
Trigger: GCTACAAGTGCAAGTGGGTCAACCAGCTGAAATACC...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGGGTATTTCAGCTGGTTaGCCCACTTGCACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLGISAG*PTCTCS
Trigger: GCTACAAGTGCAAGTGGGTCAACCAGCTGAAATACC...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATCATCCATCTCCCCGGTaGTACTGGCTGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDHPSPR*YWLAVS
Trigger: ACTCACAGCCAGCCAGTAGCACCGGGGAGATGGATG...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTACAGGGCACAGGAACTaGTCTGTGAGTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTTGHRN*SVSLPQ
Trigger: CTGAGGCAGACTCACAGAGCAGTTCCTGTGCCCTGT...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTCATAGCCACATTCAGTaGACATGTAATCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFHSHIQ*TCNPWC
Trigger: ACACCAAGGATTACATGTGCACTGAATGTGGCTATG...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGAAGCCATGTGCTTCTaGAGCTCATACTTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIEAMCF*SSYFRL
Trigger: CAAGCGGAAGTATGAGCTGCAGAAGCACATGGCTTC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGGCGGCTCTGGTAACTaGAGTAGTGGCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKGGSGN*SSGKGR
Trigger: TCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGTCACGGAGGCGGGTATaGTTGCAGTTCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKSRRRV*LQFSWL
Trigger: GAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGA...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCATAGCCATGGGCCTTaGGTTTATGGAACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSHSHGP*VYGTRV
Trigger: CACTCTTGTTCCATAAACGCAAGGCCCATGGCTATG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTAGGTGTAGTGTGCAGCTaGCCTCCTCCACCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLGVVCS*PPPPLL
Trigger: CAGCAGAGGTGGAGGAGGGCAGCTGCACACTACACC...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGGATCACTACCATCTaGACCCGCCCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGWITTI*TRPSST
Trigger: GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGAGCAGAGTCCCCATTaGTCAACGGGGACACATCAG +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTEQSPH*STGTHQ
Trigger: CTGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGAGCAGAGTCCCCATTaGTCAACGGGGACACATCAG +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKEQSPH*STGTHQ
Trigger: CTGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCACTCAGAGCCCGTTCCTaGTGGCAGCTAAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPLRARS*WQLKGH
Trigger: ATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCTGAG...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGTAAGCACAATCGGTaGACTTGTAGAGACGAGTGC +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSCKHNR*TCRDEC
Trigger: GCACTCGTCTCTACAAGTGCACCGATTGTGCTTACA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTGGCCTCACTGTGCTTaGGAAGGTGGGTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRWPHCA*EGGCAA
Trigger: TGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCTGCTGCAGGCTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFCCRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACTCCAGCCTGCAGCA...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGGAGCCGCATCTCTATaGTCGGCCGCGGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLGAASL*SAAAGT
Trigger: CGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTGTCGCTTCGCTTCTCTaGGCCTCAGCTTTCCTATCT +
Preference number: 4 (lower is better)
Translates to: VVLPLGDIATFSAHVILGVASLL*ASAFLS
Trigger: AGATAGGAAAGCTGAGGCCCAGAGAAGCGAAGCGAC...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACCTCTTCAGTTGCTGTaGCCTCTACCAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGPLQLL*PLPAGS
Trigger: GCTGCCTGCTGGTAGAGGCCACAGCAACTGAAGAGG...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGGATCTCCATGTTCCCTaGTCCCTCTTCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLDLHVP*SLFSCC
Trigger: ACAGCAACTGAAGAGGGACCAGGGAACATGGAGATC...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATACTAACTGGCGGGCTCTaGCCCTGCAGAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVILTGGL*PCRGPG
Trigger: CCCTGGCCCTCTGCAGGGCCAGAGCCCGCCAGTTAG...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATACACTCTGGACACATATaGGTCTTGAAGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIHSGHI*VLKRDS
Trigger: CGAGTCCCTCTTCAAGACCCATATGTGTCCAGAGTG...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCTGGGGTCTGGGAAGTaGAGATGCAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRLGSGK*RCRCST
Trigger: GGTGGAGCACCTGCATCTCCACTTCCCAGACCCCAG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGCGGCTGCTGCCGTGTaGCTCTTGAGGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRAAAAV*LLRCSF
Trigger: AAAGGAGCACCTCAAGAGCCACACGGCAGCAGCCGC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGGAATAGGTGCTTATTaGAACAAGCAAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: PKASLSLGSELLRLALVPGIGAY*NKQNHS
Trigger: ACTGTGATTTTGCTTGTTCCAATAAGCACCTATTCC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAAGTTGCACTCAGGACACTGGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGAGCACCCTCTTGTaGGCAGTGGCAAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: KVALRTLVDLFMSMHLAYMSTLL*AVAKLH
Trigger: GTGCAACTTTGCCACTGCCCACAAGAGGGTGCTCAT...GTAGGCAAGATGCATGCTCATGAAAAGATCCACCAGTGTCCTGAGTGCAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGTGGCAAGGGTAGAGTaGGGCCGGTGTGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLVARVE*GRCARV
Trigger: CACCCTGGCACACCGGCCCCACTCTACCCTTGCCAC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGGTCGGGCTGACAGCTaGTTTGAGGGCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTGRADS*FEGSES
Trigger: AGATTCAGAGCCCTCAAACCAGCTGTCAGCCCGACC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACTCCTTCCAGTCCATCTaGCCCTTCCAGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYSFQSI*PFQSQG
Trigger: CCCCTGGGACTGGAAGGGCCAGATGGACTGGAAGGA...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACTTGGCACCCAGTCCTaGAGTGCAGATTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGLGTQS*SADSGP
Trigger: AGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAG...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGTGTCCTCTGAGGCCTaGGTACCTGGGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRVSSEA*VPGSTG
Trigger: ACCTGTGCTCCCAGGTACCCAGGCCTCAGAGGACAC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGAGAGCCCGTTCCTGCTaGCAGCTAAAGGGACATGTA +
Preference number: 4 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRRARSC*QLKGHV
Trigger: TACATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCT...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTAGAGCCCGTTCCTGCTaGCAGCTAAAGGGACATGTA +
Preference number: 4 (lower is better)
Translates to: VVLPLGDIATFSAHVILGRARSC*QLKGHV
Trigger: TACATGTCCCTTTAGCTGCCAGCAGGAACGGGCTCT...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGGGCTGGGGCTGCAGTaGGGTGCCTCCGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIGLGLQ*GASASG
Trigger: ACCAGAAGCGGAGGCACCCCACTGCAGCCCCAGCCC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATACTAACCGGTACCGTCTaGTGGTCGAAAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSILTGTV*WSKSHR
Trigger: TCTGTGACTTTTCGACCACCAGACGGTACCGGTTAG...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCACTATAGTCACAAAGTaGACAGAAGTGGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFTIVTK*TEVGRC
Trigger: ACACCTACCCACTTCTGTCCACTTTGTGACTATAGT...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCATGTGGTATTTCAGCTaGTTGACCCACTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLMWYFS*LTHLHL
Trigger: CAAGTGCAAGTGGGTCAACCAGCTGAAATACCACAT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCACTCGGGACACTGGTATaGCTTCAGTCCTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPALGTLV*LQSCML
Trigger: AAGCATACAGGACTGAAGCCATACCAGTGTCCCGAG...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGCTCGGGACACTGGTATaGCTTCAGTCCTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLLGTLV*LQSCML
Trigger: AAGCATACAGGACTGAAGCCATACCAGTGTCCCGAG...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGTCACACTCGGGACACTaGTATGGCTTCAGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKSHSGH*YGFSPV
Trigger: TACAGGACTGAAGCCATACCAGTGTCCCGAGTGTGA...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACTCGGCTTGGTCAGGGTaGTGCCTGCGTACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYSAWSG*CLRTCL
Trigger: CAAGCACGTACGCAGGCACCACCCTGACCAAGCCGA...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCATGCAGGTGCACTGTaGGGGTGGTGGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRHAGAL*GWWGLC
Trigger: GCAAAGACCCCACCACCCCCACAGTGCACCTGCATG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGTTTTCATAAGCCTTTaGTATCTTTCCTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KASLSLGSELLRLALVPVVFISL*YLSCPF
Trigger: AAAAGGGCAGGAAAGATACCAAAGGCTTATGAAAAC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCCACAACTTCCTAATTaGGTAATGTTGGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESPQLPN*VMLGKF
Trigger: GAACTTGCCCAACATTACCCAATTAGGAAGTTGTGG...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACCTCCTGGAGGCAGTTTaGGAGCTGGGGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYLLEAV*ELGSLQ
Trigger: CTGGAGAGACCCCAGCTCCCAAACTGCCTCCAGGAG...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449707.5
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATCAGGAGTGCCCCGGTaGATCTTGAAGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGSGVPR*ILKWLF
Trigger: GAAGAGCCACTTCAAGATTCACCGGGGCACTCCTGA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTAACAGGAACTGCTCTGTaGGTCTGCCTCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLTGTAL*VCLRWC
Trigger: GCACCACCTGAGGCAGACTCACAGAGCAGTTCCTGT...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGACAGGCATAGGTGTCTaGGTAGAAGTTGGAAATATC +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVTGIGV*VEVGNI
Trigger: GATATTTCCAACTTCTACTCAGACACCTATGCCTGT...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGTCACGTCTCGGCATGTaGAGTCACACAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKSRLGM*SHTAHT
Trigger: AGTGTGAGCTGTGTGACTTCACATGCCGAGACGTGA...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCGGTTGCACTGATACCTaGGGTCCCCTGCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFGCTDT*GPLHVF
Trigger: GAAAACATGCAGGGGACCTCAGGTATCAGTGCAACC...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCTGGCAGCTGTTGACATaGCGAGTGATGTCATGGCGA +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFWQLLT*RVMSWR
Trigger: TCGCCATGACATCACTCGTCATGTCAACAGCTGCCA...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGCTGACAGCGGTGGCTaGAATGCTGCTGCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLADSGG*NAAASG
Trigger: ACCGGAGGCAGCAGCATTTCAGCCACCGCTGTCAGC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGCAGGAAGCGCGTCTTaGAGGCCTTGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNAGSAS*RPCHTA
Trigger: AGCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTAGTATCAATACTGAGTaGAGATGGAAGGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFSINTE*RWKGQK
Trigger: CTTTTGTCCCTTCCATCTTCACTCAGTATTGATACT...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCCTGGAAATCCCGAAATaGCTTTATTGGTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLLEIPK*LYWSVH
Trigger: GTGTACTGACCAATAAAGTCATTTCGGGATTTCCAG...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAGCCCTGACTACAGGTaGTCAGCGGTCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYSPDYR*SAVSNS
Trigger: GGAGTTGCTGACCGCTGATCACCTGTAGTCAGGGCT...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATCTACTTTCAAACTGTTaGATTTCTACCTGGATCCAT +
Preference number: 4 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDLLSNC*ISTWIH
Trigger: ATGGATCCAGGTAGAAATTCAACAGTTTGAAAGTAG...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCAGGAAGGCCTCCATGGTaGATCTTGCTCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAGRPPW*ILLFFS
Trigger: AGAAAAGAAGAGCAAGATTCACCATGGAGGCCTTCC...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACACTCTCTCTTCCTCTTaGCGGCTGCCGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYTLSSS*RLPGYS
Trigger: AGAGTACCCCGGCAGCCGGCAAGAGGAAGAGAGAGT...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATCTTCAGCTGTCTCCTaGCCAGGCAAGGGTGTACCT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGSSAVS*PGKGVP
Trigger: AGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAAGAGTGGGGCCGGTGTaGCAGGGTGGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIRVGPV*QGGAGK
Trigger: CTTCCCAGCACCACCCTGGCACACCGGCCCCACTCT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGGTGTAGTGTGCAGCTaGCCTCCTCCACCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNGVVCS*PPPPLL
Trigger: CAGCAGAGGTGGAGGAGGGCAGCTGCACACTACACC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTACCTCTAGGTGTAGTGTaGAGCTGCCCTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLPLGVV*SCPPPP
Trigger: AGGTGGAGGAGGGCAGCTGCACACTACACCTAGAGG...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATCCTGGGAGCACAGGTTaGAGAGGGATGGGTGAATCT +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDPGSTG*RGMGES
Trigger: AGATTCACCCATCCCTCTGCAACCTGTGCTCCCAGG...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATCTGGGGGCAAGAGCTaGAGGGGATGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLSGGKS*RGCGQC
Trigger: GCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTGTCGGCGCAGAGCATaGTGCTTAAGTGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTCRRRA*CLSAVS
Trigger: AGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATCACTCAAGCCGTGGGTaGTGTTTACGGGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDHSSRG*CLRVCP
Trigger: AGGACACACCCGTAAACAGCACCCACGGCTTGAGTG...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGTGTGGATGCGGCTGTaGCAGGTGATCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRVWMRL*QVIFCR
Trigger: CCGACAGAAGATCACCTGGCACAGCCGCATCCACAC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATGCCGGGTCTCCTGGTaGACACGCAGTGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLCRVSW*TRSASA
Trigger: GGCTGATGCACTGCGTGTGCACCAGGAGACCCGGCA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCTGGTGCCTGCGTACGTaGTTGACCACCTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFWCLRT*LTTWNF
Trigger: AAAGTTCCAGGTGGTCAAGCACGTACGCAGGCACCA...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACTGGGATCCTCCAGCTaGACATCATGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGLGSSS*TSCRCT
Trigger: AGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAG...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCTTTGGTATCTTTCCTaGCCTTTTCCTTTGTGTACT +
Preference number: 4 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARLWYLS*PFPLCT
Trigger: AGTACACAAAGGAAAAGGGCAGGAAAGATACCAAAG...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTTGGTCAGTACACCCTaGCTTGGACCTGCATGCAAC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLVSTP*LGPACN
Trigger: GTTGCATGCAGGTCCAAGGCAGGGTGTACTGACCAA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAATATTATCGCTGTTCTaGGGAATCTTCAAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: GSTGESADLWRSSRHSTAILSLF*GIFKLD
Trigger: GTCAAGCTTGAAGATTCCCCAGAACAGCGATAATAT...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGCATGCTGGCCATGTaGCGGTTGAGTGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGCMLAM*RLSAFL
Trigger: GAGGAATGCACTCAACCGCCACATGGCCAGCATGCA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGACAGCCCGCACCCCATaGGTCTCCTTCAGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRTARTP*VSFRCL
Trigger: TAAGCACCTGAAGGAGACCCATGGGGTGCGGGCTGT...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCACTATAGTCACAAAGTaGACAGAAGTGGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSHPCTPKASLSLGSELLTIVTK*TEVGRC
Trigger: ACACCTACCCACTTCTGTCCACTTTGTGACTATAGT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGGAGCAGGCAAAGGCTaGGGTGCCTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLGAGKG*GALVAA
Trigger: AGCTGCCACCAAGGCACCCCAGCCTTTGCCTGCTCC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACCCCACACTCAAGCCGTaGGTGCTGTTTACGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYPTLKP*VLFTGV
Trigger: CACACCCGTAAACAGCACCCACGGCTTGAGTGTGGG...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGTGCATCAGCCCGGTTaGTGCAGTACTCACACTCGG +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRVHQPG*CSTHTR
Trigger: CCGAGTGTGAGTACTGCACCAACCGGGCTGATGCAC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACTGTGCTTGCGAAGGTaGGTGCGCAGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLLCLRR*VRSRKR
Trigger: GCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACTGGTTTGGGTCGGCTTaGTCAGGGTGGTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNWFGSA*SGWCLR
Trigger: ACGCAGGCACCACCCTGACCAAGCCGACCCAAACCA...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCATATGTTTCCGGGTGCTaGTGCCTGAACTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPYVSGC*CLNLPC
Trigger: GCATGGCAAGTTCAGGCACCAGCACCCGGAAACATA...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGAGCACTGGTTGCACTaGTACCTGAGGTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNEHWLH*YLRSPA
Trigger: TGCAGGGGACCTCAGGTATCAGTGCAACCAGTGCTC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACATCAGAGACTTGCCCTaGTGCCGCAGCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNIRDLP*CRSLWL
Trigger: CAGCCACAAGCTGCGGCATCAGGGCAAGTCTCTGAT...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKVSLGP*VMTLTQ
Trigger: CTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGAC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR TCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTAGGGCAGGAGTTGCAGTaGAACTTGCCCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLGQELQ*NLPCSK
Trigger: CTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCC...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGGCAGCTGTTGACATaGCGAGTGATGTCATGGCGA +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGWQLLT*RVMSWR
Trigger: TCGCCATGACATCACTCGTCATGTCAACAGCTGCCA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGCAGGAAGCGCGTCTTaGAGGCCTTGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLAGSAS*RPCHTA
Trigger: AGCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCGCTTGGTCAAGAGTATaGTCGTGTCTCTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PLFCPSICCQIVAQAPISAWSRV*SCLFEK
Trigger: TTTTTCAAAGAGACACGATCATACTCTTGACCAAGC...GGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGGACAAAACAGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTATGTATCCCAGCGGCCTaGGGACAGACTCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLCIPAA*GQTLPT
Trigger: AGTTGGAAGAGTCTGTCCTCAGGCCGCTGGGATACA...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGCCGGTGCAGCTCCATaGCCTGCTGGCTCCCGAAAA +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIAGAAP*PAGSRK
Trigger: TTTTCGGGAGCCAGCAGGGCATGGAGCTGCACCGGC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCATGTGGCGGTTGAGTaGATTCCTCTCCACCGCACT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRHVAVE*IPLHRT
Trigger: AGTGCGGTGGAGAGGAATGCACTCAACCGCCACATG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp AAAGTTGCACTCAGGACACTGGTGGATCTTTTCATGAGCATGCATCTTGCCTACTTGGAAATATCTTCATaGATGCTGGCCATGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KVALRTLVDLFMSMHLAYLEISS*MLAMWR
Trigger: CCGCCACATGGCCAGCATGCATGAAGATATTTCCAA...GTAGGCAAGATGCATGCTCATGAAAAGATCCACCAGTGTCCTGAGTGCAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGTGTGGCTCTTGAGGTaGTCCTTTAGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNVWLLR*SFRAWL
Trigger: CAGCCAGGCCCTAAAGGAGCACCTCAAGAGCCACAC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATCTGCCAGGGTGGCCCTaGTTCTTGTGTTTACGGAAT +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDLPGWP*FLCLRN
Trigger: ATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAG...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCAATACCTGAGGTCCCCTaGATGTTTTCGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPIPEVP*MFSHVH
Trigger: GTGCACATGCGAAAACATGCAGGGGACCTCAGGTAT...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGGCGGCTCTGGTAACTaGAGTAGTGGCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRGGSGN*SSGKGR
Trigger: TCTACCCTTGCCACTACTGCAGTTACCAGAGCCGCC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACCTGAGGCCGCGTTGTTaGTTGAAGCTAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNLRPRC*LKLAPH
Trigger: GTGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAG...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGAATGGGCAGGAGTTaGAGTGAAACTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGMGRS*SETCPA
Trigger: AGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATCTGGGGGCAAGAGCTaGAGGGGATGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFISGGKS*RGCGQC
Trigger: GCATTGGCCGCATCCCCTGCAGCTCTTGCCCCCAGA...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCACTCAAGCCGTGGGTaGTGTTTACGGGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRHSSRG*CLRVCP
Trigger: AGGACACACCCGTAAACAGCACCCACGGCTTGAGTG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATGCTGCTGCCTCCGGTaGTCATCCAGAGCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVICCCLR*SSRASR
Trigger: CCGACTGGCTCTGGATGAGCACCGGAGGCAGCAGCA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACGGTGGCTGAAATGCTaGTGCCTCCGGTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLRWLKC*CLRCSS
Trigger: GGATGAGCACCGGAGGCAGCAGCATTTCAGCCACCG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGTGTGGATGCGGCTGTaGCAGGTGATCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNVWMRL*QVIFCR
Trigger: CCGACAGAAGATCACCTGGCACAGCCGCATCCACAC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAGGCGGTTTGTAACCTaGAAGGCTCCAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYRRFVT*KAPDPE
Trigger: CTCTGGGTCTGGAGCCTTCCAGGTTACAAACCGCCT...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGACTGTAGTGGCACAGTaGGCAGTGGTGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRTVVAQ*AVVGLF
Trigger: GAAAAGGCCCACCACTGCCCACTGTGCCACTACAGT...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTGCATGCTGGCCATGTaGCGGTTGAGTGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRCMLAM*RLSAFL
Trigger: GAGGAATGCACTCAACCGCCACATGGCCAGCATGCA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTTGTCTGAGTAGAAGTTaGAAATATCTTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: HIHLLSKDGISLRPASIFCLSRS*KYLHAC
Trigger: GCATGCATGAAGATATTTCCAACTTCTACTCAGACA...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACACAGCCCGCACCCCATaGGTCTCCTTCAGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNTARTP*VSFRCL
Trigger: TAAGCACCTGAAGGAGACCCATGGGGTGCGGGCTGT...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCCATGGCTTCGGCTGTaGCAAAGAGCATGGGACATG +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRPWLRL*QRAWDM
Trigger: CATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCGGAATAGGTGCTTATTaGAACAAGCAAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESGIGAY*NKQNHS
Trigger: ACTGTGATTTTGCTTGTTCCAATAAGCACCTATTCC...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTACCCTCTTGTGGGCAGTaGCAAAGTTGCACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLPSCGQ*QSCTQD
Trigger: GTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGG...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGTGCCAGGGTGGTGCTaGGAAGCCATGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLVPGWC*EAMCFC
Trigger: GCAGAAGCACATGGCTTCCCAGCACCACCCTGGCAC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACCCCATCACCAGAGCTaGACTCTGTACTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGPHHQS*TLYSHS
Trigger: AGAATGGGAGTACAGAGTCCAGCTCTGGTGATGGGG...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATCCCCATCACCAGAGCTaGACTCTGTACTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDPHHQS*TLYSHS
Trigger: AGAATGGGAGTACAGAGTCCAGCTCTGGTGATGGGG...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTACTATAGTCACAAAGTaGACAGAAGTGGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSTIVTK*TEVGRC
Trigger: ACACCTACCCACTTCTGTCCACTTTGTGACTATAGT...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATACTAGGGAAGGCCTCCTaGCAGGCCCCACACTCAAGC +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFILGKAS*QAPHSS
Trigger: GCTTGAGTGTGGGGCCTGCCAGGAGGCCTTCCCTAG...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTCAGTCCTGTATGCTTaGTCATGTGGTATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSSVLYA*SCGISA
Trigger: AGCTGAAATACCACATGACCAAGCATACAGGACTGA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTCACACTCGGGACACTaGTATGGCTTCAGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTSHSGH*YGFSPV
Trigger: TACAGGACTGAAGCCATACCAGTGTCCCGAGTGTGA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCTGCACACATAGGGTTTaGCCTCACTGTGCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFCTHRV*PHCACE
Trigger: TTCGCAAGCACAGTGAGGCCAAACCCTATGTGTGCA...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCCTGGAACTTTTGCTTaGCCTTGTAGTTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTPGTFA*PCSCRG
Trigger: GCCTCTGCAACTACAAGGCCAAGCAAAAGTTCCAGG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACTCTTTGCCCACACCCTaGTTTGGGTCGGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYSLPTP*FGSAWS
Trigger: TGACCAAGCCGACCCAAACCAGGGTGTGGGCAAAGA...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGGTGCACTGTGGGGGTaGTGGGGTCTTTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIGALWG*WGLCPH
Trigger: GTGTGGGCAAAGACCCCACCACCCCCACAGTGCACC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGTGCACTGTGGGGGTaGTGGGGTCTTTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGALWG*WGLCPH
Trigger: GTGTGGGCAAAGACCCCACCACCCCCACAGTGCACC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATAAAGAGAAGATGGAGTaGGTAAAATCCAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYKEKME*VKSRSY
Trigger: ATAAGATCTGGATTTTACCCACTCCATCTTCTCTTT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCCAGAATGGCGGCTGTaGCTATGTGCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRPEWRL*LCAEAR
Trigger: TCTGGCTTCAGCACATAGCCACAGCCGCCATTCTGG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAACCCCCAGGAACTCTaGAATGCAGGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRNPQEL*NAGCQM
Trigger: CATCTGGCAGCCTGCATTCCAGAGTTCCTGGGGGTT...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
3UTR CAA 72 bp ATCTTGTGTCCAGCCCTCTCTTCCCTGGTTATCTACTaGAAGTCTGTCTCATTCCGCAGCTTCACACATTCA +
Preference number: 4 (lower is better)
Translates to: ILCPALSSLVIY*KSVSFRSFTHS
Trigger: TGAATGTGTGAAGCTGCGGAATGAGACAGACTTCAAGTAGATAACCAGGGAAGAGAGGGCTGGACACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAGCCAAGGAGGACGCTaGGCCGTCAAGATTAAGAAC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRSQGGR*AVKIKN
Trigger: GTTCTTAATCTTGACGGCTCAGCGTCCTCCTTGGCT...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGCTGCCGTGTGGCTCTTaGGGTGCTCCTTTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWLPCGS*GAPLGP
Trigger: AGGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAG...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGAGCATGGGACATGAGTaGTGGCGGCACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWSMGHE*WRHSTA
Trigger: GGCTGTGGAGTGCCGCCATCACTCATGTCCCATGCT...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAGAGTGTGGTGTTGCTaGAGGTGCGGTAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRRVWCC*RCGSHR
Trigger: TCTGTGACTACCGCACCTTCAGCAACACCACACTCT...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGCTGCCACGGCTGCTaGAGTCTCCTCATGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGCHGC*SLLMLF
Trigger: GAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGTATTTCAGCTGGTTaGCCCACTTGCACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGISAG*PTCTCS
Trigger: GCTACAAGTGCAAGTGGGTCAACCAGCTGAAATACC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGTATAGCCAGGGACTTTaGTGGAGTGATGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRYSQGL*WSDGEE
Trigger: TTCTTCACCATCACTCCATCAAAGTCCCTGGCTATA...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCATCTGGGTAGTCAGGTaGGACAAGGAAAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFIWVVR*DKEKVE
Trigger: CTCTACCTTTTCCTTGTCTCACCTGACTACCCAGAT...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACAGATGGAGGTTGCAGTaGGCTATGACTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNRWRLQ*AMTAPL
Trigger: CAGTGGGGCAGTCATAGCTCACTGCAACCTCCATCT...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAGGCAGGAGGACTGCTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIGRRTA*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGCAGTCCTCCTGCC...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCATCTCTCTCAGACTGCTaGGGGTTCAATTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPSLSDC*GFNSIF
Trigger: GAAGATGGAATTGAACCCTCAGCAGTCTGAGAGAGA...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAACTCTCTCTTCCTCTTaGCGGCTGCCGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLTLSSS*RLPGYS
Trigger: AGAGTACCCCGGCAGCCGGCAAGAGGAAGAGAGAGT...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000450765.5
CDS-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATACGGGTGCTGCATAGCTaGAGCCCTCCTGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIRVLHS*SPPESS
Trigger: GCTGCTTTCAGGAGGGCTGCAGCTATGCAGCACCCG...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACTGGGTCTCCTTCAGGTaGTTAATGAAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYWVSFR*LMKALR
Trigger: CCGCAAGGCCTTCATTAAGCACCTGAAGGAGACCCA...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGTTCTGGCTCCTGGCTTaGATAGCGGAGCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWFWLLA*IAELPG
Trigger: GCCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAA...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACCCTGCTCAAAGCGGTaGTTCTTCAGGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLPCSKR*FFRASV
Trigger: CACAGAGGCCCTGAAGAAGCACCGCTTTGAGCAGGG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAAGTTGCAGTGAAACTTaGCCTGCTCAAAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGSCSET*PAQSGA
Trigger: AGCACCGCTTTGAGCAGGGCAAGTTTCACTGCAACT...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGAGGGGATGCGGCCAATaGCTGTGTGTCGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWRGCGQ*LCVGTG
Trigger: ACCAGTCCCGACACACAGGCATTGGCCGCATCCCCT...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTGTCGGCGCAGAGCATaGTGCTTAAGTGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRCRRRA*CLSAVS
Trigger: AGAGACAGCACTTAAGCAGCATGCTCTGCGCCGACA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACCACGGTGGCACACATTaGACACATAGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYHGGTH*THRVWP
Trigger: AGGCCAAACCCTATGTGTGCAATGTGTGCCACCGTG...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGCTTGGCCTTGTAGTTaGAGAGGCGGCAAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRAWPCS*RGGKRR
Trigger: CCTTCTTTTGCCGCCTCTGCAACTACAAGGCCAAGC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGAAGGACAGGGGCTCTaGACAGGCCCCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWEGQGL*TGPRIP
Trigger: TGGAATCCTGGGGCCTGTCCAGAGCCCCTGTCCTTC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACCTCTTCAGTTGCTGTaGCCTCTACCAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLPLQLL*PLPAGS
Trigger: GCTGCCTGCTGGTAGAGGCCACAGCAACTGAAGAGG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGCAGCGCTTACACTCTaGACACATATGGGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTAALTL*THMGLE
Trigger: TTCAAGACCCATATGTGTCCAGAGTGTAAGCGCTGC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATACTGGGGTCTGGGAAGTaGAGATGCAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVILGSGK*RCRCST
Trigger: GGTGGAGCACCTGCATCTCCACTTCCCAGACCCCAG...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGTGGCACAGTGGGCAGTaGTGGGCCTTTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWWHSGQ*WAFSPS
Trigger: GCTGGGTGAAAAGGCCCACCACTGCCCACTGTGCCA...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGTGTCTGAGTAGAAGTTaGAAATATCTTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVCLSRS*KYLHAC
Trigger: GCATGCATGAAGATATTTCCAACTTCTACTCAGACA...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAACAGCCCGCACCCCATaGGTCTCCTTCAGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLTARTP*VSFRCL
Trigger: TAAGCACCTGAAGGAGACCCATGGGGTGCGGGCTGT...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTAATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLILVSH*VEGGKG
Trigger: CCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGAT...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTAGGGTCAGCATGTGCTTaGATAGGTAGCTCACGTCTC +
Preference number: 4 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLGSACA*IGSSRL
Trigger: GAGACGTGAGCTACCTATCCAAGCACATGCTGACCC...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGGGTCAGCATGTGCTTaGATAGGTAGCTCACGTCTC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRGSACA*IGSSRL
Trigger: GAGACGTGAGCTACCTATCCAAGCACATGCTGACCC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACTCCTCACTCATCTCTaGCAGGGCCTGGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLLLTHL*QGLVQA
Trigger: AGCTTGGACCAGGCCCTGCCAGAGATGAGTGAGGAG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAGGATGGAGGATTTGTaGAGGGCTCAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYRMEDL*RAQTLA
Trigger: AGCCAGTGTCTGAGCCCTCCACAAATCCTCCATCCT...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGCTCGCCCCTCTCCCTaGATCACTACCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWARPSP*ITTICT
Trigger: GGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACTCTTCTGTTTCTTCTaGCTCCCTGGGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGLFCFF*LPGKLQ
Trigger: TTGGAGCTTCCCAGGGAGCCAGAAGAAACAGAAGAG...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGGGTGCCTCCGCTTCTaGTGGAGCCTTAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIGCLRF*WSLKAV
Trigger: CACTGCCTTAAGGCTCCACCAGAAGCGGAGGCACCC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACAGCGCAGTTTCGAGTTaGTACCAAACGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNSAVSS*YQTSGG
Trigger: GCCCCCAGACGTTTGGTACCAACTCGAAACTGCGCT...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGCAAAGTGGACAGAAGTaGGTAGGTGTTTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLQSGQK*VGVLSC
Trigger: ACATGACAAAACACCTACCCACTTCTGTCCACTTTG...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCTCTTCTGTCGGTTCTTaGTGCTGTAAGCACAATCGG +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFSSVGS*CCKHNR
Trigger: CCGATTGTGCTTACAGCACCAAGAACCGACAGAAGA...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATTCCGTTCCTCCTTGTaGATCCGCATGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGFRSSL*IRMWYL
Trigger: CAAGTACCACATGCGGATCCACAAGGAGGAACGGAA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGTCAGTCCTGTATGCTTaGTCATGTGGTATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLSVLYA*SCGISA
Trigger: AGCTGAAATACCACATGACCAAGCATACAGGACTGA...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGTGCATCAGCCCGGTTaGTGCAGTACTCACACTCGG +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLVHQPG*CSTHTR
Trigger: CCGAGTGTGAGTACTGCACCAACCGGGCTGATGCAC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCGTAATGGATTATGACTaGAAATCCCGAAATGACTTT +
Preference number: 4 (lower is better)
Translates to: PSICCQIVAQAPISKPESVMDYD*KSRNDF
Trigger: AAAGTCATTTCGGGATTTCCAGTCATAATCCATTAC...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCAGGTTTTAATCCATACTaGGGGCAGACACTATGTTTC +
Preference number: 4 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAGFNPY*GQTLCF
Trigger: GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACC...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGAGGCAGTTTGGGAGCTaGGGTCTCTCCAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWRQFGS*GLSRST
Trigger: GGTGCTCCTGGAGAGACCCCAGCTCCCAAACTGCCT...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449707.5
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGTAAGCCACTGGGTTaGAGGTGGCAAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGKPLG*RWQRGR
Trigger: TCTGCCCCTTTGCCACCTTCAACCCAGTGGCTTACC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAGAAGCATGTGTCGGATaGGCACCCTCTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIEACVG*APSCGQ
Trigger: CTGCCCACAAGAGGGTGCTCATCCGACACATGCTTC...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRVSLGP*VMTLTQ
Trigger: CTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGAC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATTGCAGAGGGATGGGTaGATCTGGTCTGGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFILQRDG*IWSGQA
Trigger: GGCTTGCCCAGACCAGATTCACCCATCCCTCTGCAA...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATTGCAGAGGGATGGGTaGATCTGGTCTGGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVILQRDG*IWSGQA
Trigger: GGCTTGCCCAGACCAGATTCACCCATCCCTCTGCAA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGCCTGCGTACGTGCTTaGCCACCTGGAACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLACVRA*PPGTFA
Trigger: AGCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTATAGCCAGGGACTTTaGTGGAGTGATGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTYSQGL*WSDGEE
Trigger: TTCTTCACCATCACTCCATCAAAGTCCCTGGCTATA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACTGTGGAGAACAATGGTaGGAAACTGGCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNCGEQW*ETGSAG
Trigger: CCCAGCACTGCCAGTTTCTCACCATTGTTCTCCACA...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATCTTCAGCTGTCTCCTaGCCAGGCAAGGGTGTACCT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLSSAVS*PGKGVP
Trigger: AGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACATGTGGCGGTTGAGTaGATTCCTCTCCACCGCACT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLHVAVE*IPLHRT
Trigger: AGTGCGGTGGAGAGGAATGCACTCAACCGCCACATG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGATACCTGAGGTCCCCTaGATGTTTTCGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRIPEVP*MFSHVH
Trigger: GTGCACATGCGAAAACATGCAGGGGACCTCAGGTAT...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATACATGGGGAGCCTCACTaGCCTCCTGTCTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIHGEPH*PPVFQC
Trigger: ACACTGGAAGACAGGAGGGCAGTGAGGCTCCCCATG...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATACCTCTAGGTGTAGTGTaGAGCTGCCCTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIPLGVV*SCPPPP
Trigger: AGGTGGAGGAGGGCAGCTGCACACTACACCTAGAGG...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGCTGAGGCCGCGTTGTTaGTTGAAGCTAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWLRPRC*LKLAPH
Trigger: GTGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAG...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACTGTACCCTTAACCGGTaGAAGCGCAGTTTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYCTLNR*KRSFEL
Trigger: CAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACA...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTCTGTCGGTTCTTGGTaGTGTAAGCACAATCGGTGC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRSVGSW*CKHNRC
Trigger: GCACCGATTGTGCTTACAGCACCAAGAACCGACAGA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGTCCAGCTGCACATCATaGAGGTGCACTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWSSCTS*RCTVGV
Trigger: CACCCCCACAGTGCACCTGCATGATGTGCAGCTGGA...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTCAAGCTTTGGATTGTaGATTCCTAGGCACAAAATT +
Preference number: 4 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSSSFGL*IPRHKI
Trigger: AATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATACCCCAGCTCTGGCTaGCTTCCTAATGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLYPSSG*LPNAVL
Trigger: GAGGACAGCATTAGGAAGGCAGCCAGAGCTGGGGTA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAAGAGTCTTGCTCTGCTaGAGGCTGGAGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIRVLLC*RLECSG
Trigger: GCCACTGCACTCCAGCCTGCAGCAGAGCAAGACTCT...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTACCAGCAGGTACCGTaGACCCAGTACCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRYQQVP*TQYLSS
Trigger: AGAAGATAGGTACTGGGTGCACGGTACCTGCTGGTA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGTAGGGTTGGGGAATaGTCAAGAAAATTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGRVGE*SRKLLG
Trigger: GCCTAGCAATTTTCTTGAGCATTCCCCAACCCTACC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGTCGCTTCGCTTCTCTaGGCCTCAGCTTTCCTATCT +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNVASLL*ASAFLS
Trigger: AGATAGGAAAGCTGAGGCCCAGAGAAGCGAAGCGAC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATCTCCCCGGTGCTACTaGCTGGCTGTGAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLSPRCY*LAVSPK
Trigger: TTTTGGACTCACAGCCAGCCAGTAGCACCGGGGAGA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACCCTCTTGTGGGCAGTaGCAAAGTTGCACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLPSCGQ*QSCTQD
Trigger: GTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGTAATCCTTGGTGTTaGAGTGGGTCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGCNPWC*SGSACA
Trigger: AGCACATGCTGACCCACTCCAACACCAAGGATTACA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGCACTTCTTCAGCAGGTaGGTGCTGAGGCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWHFFSR*VLRPRC
Trigger: ACAACGCGGCCTCAGCACCCACCTGCTGAAGAAGTG...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACACCGGTACCGTCTGGTaGTCGAAAAGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNTGTVW*SKSHRR
Trigger: CCTTCTGTGACTTTTCGACCACCAGACGGTACCGGT...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACCTAACCGGTACCGTCTaGTGGTCGAAAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYLTGTV*WSKSHR
Trigger: TCTGTGACTTTTCGACCACCAGACGGTACCGGTTAG...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGCCCACACTCAAGCCGTaGGTGCTGTTTACGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWPTLKP*VLFTGV
Trigger: CACACCCGTAAACAGCACCCACGGCTTGAGTGTGGG...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACTTGTGGATCCGCATGTaGTACTTGAGACGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYLWIRM*YLRREG
Trigger: TCCCTCTCGTCTCAAGTACCACATGCGGATCCACAA...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTCACACTCGGGACACTaGTATGGCTTCAGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRSHSGH*YGFSPV
Trigger: TACAGGACTGAAGCCATACCAGTGTCCCGAGTGTGA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATATTGTGTACTCTATACTaGAGTTCCCTTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSILCTLY*SSLLPL
Trigger: AAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAA...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGGAGGAGCAGCAGGTaGGAAATAAGTTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGWRSSR*EISSLV
Trigger: CACTAGAGAACTTATTTCCCACCTGCTGCTCCTCCA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGTGCAGCACAATACTTaGCAGTTAAGCCGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTVQHNT*QLSRVY
Trigger: ATACACACGGCTTAACTGCCAAGTATTGTGCTGCAC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAGGGAATCTTCAAGCTTaGCCATACATGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIGNLQA*PYMASG
Trigger: CCCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCC...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGAAAGAGCATGGGACATaGGTGATGGCGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWKEHGT*VMAALH
Trigger: GTGGAGTGCCGCCATCACTCATGTCCCATGCTCTTT...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACCAGGTGGAGTTGTCTTaGAGGTTCCTACCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNQVELS*RFLPSC
Trigger: ACAACTGGGTAGGAACCTTCAAGACAACTCCACCTG...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGGCAGGAGTTGCAGTaGAACTTGCCCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGQELQ*NLPCSK
Trigger: CTTTGAGCAGGGCAAGTTTCACTGCAACTCCTGCCC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGCTCTGTTTACAGGTaGAGCCACAGTCCCCACACT +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGSVYR*SHSPHT
Trigger: AGTGTGGGGACTGTGGCTTCACCTGTAAACAGAGCC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGCTGATGGCGGCATGTaGAGTCACAAAAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIADGGM*SHKRGS
Trigger: ACTGCCCCTTTTGTGACTTCACATGCCGCCATCAGC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACTGAGCAGGAACTTGTaGGATTCCAGAGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLLSRNL*DSRALT
Trigger: AGTCAGGGCTCTGGAATCTCACAAGTTCCTGCTCAG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATACTCAGTAGGTATAGGTaGAGGGTCCCGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFILSRYR*RVPGRT
Trigger: TGTCCTTCCCGGGACCCTGCACCTATACCTACTGAG...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATGGGTCTCCTTCAGGTaGTTAATGAAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLWVSFR*LMKALR
Trigger: CCGCAAGGCCTTCATTAAGCACCTGAAGGAGACCCA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTACTGCCAGGGTGGCCCTaGTTCTTGTGTTTACGGAAT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLLPGWP*FLCLRN
Trigger: ATTCCGTAAACACAAGAAGCAGGGCCACCCTGGCAG...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGAGGCGGGTATGCTTaGAGTTCTCATGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGGGYA*SSHGSA
Trigger: TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAGGAGGCGGGTATGCTTaGAGTTCTCATGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIGGGYA*SSHGSA
Trigger: TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCC...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGAGCAGAGTCCCCATTaGTCAACGGGGACACATCAG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWEQSPH*STGTHQ
Trigger: CTGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATGGCTGAAATGCTGCTaGCTCCGGTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIWLKCC*LRCSSR
Trigger: TCTGGATGAGCACCGGAGGCAGCAGCATTTCAGCCA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp AGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGCTAGATTTTTGGGAGTCCTTCTaGGTGTCACTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGFSSALKSEVPIPSKLDFWESF*VSLFSS
Trigger: AGAAGAGAAGAGTGACACCCAGAAGGACTCCCAAAA...ATCTAGCTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGTGTCTGAGTAGAAGTTaGAAATATCTTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLCLSRS*KYLHAC
Trigger: GCATGCATGAAGATATTTCCAACTTCTACTCAGACA...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGCCATGGCTTCGGCTGTaGCAAAGAGCATGGGACATG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWPWLRL*QRAWDM
Trigger: CATGTCCCATGCTCTTTGCCACAGCCGAAGCCATGG...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTGTAATCCTTGGTGTTaGAGTGGGTCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRCNPWC*SGSACA
Trigger: AGCACATGCTGACCCACTCCAACACCAAGGATTACA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACTGGGCCTTGCGTTTATaGAACAAGAGTGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYWALRL*NKSVVL
Trigger: CAACACCACACTCTTGTTCCATAAACGCAAGGCCCA...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCACAAAGTGGACAGAAGTaGGTAGGTGTTTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPQSGQK*VGVLSC
Trigger: ACATGACAAAACACCTACCCACTTCTGTCCACTTTG...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCAAAGTGGACAGAAGTaGGTAGGTGTTTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTQSGQK*VGVLSC
Trigger: ACATGACAAAACACCTACCCACTTCTGTCCACTTTG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGTATGCTTGGTCATGTaGTATTTCAGCTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGVCLVM*YFSWLT
Trigger: GGTCAACCAGCTGAAATACCACATGACCAAGCATAC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTTCAGTCCTGTATGCTTaGTCATGTGGTATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTSVLYA*SCGISA
Trigger: AGCTGAAATACCACATGACCAAGCATACAGGACTGA...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAACAATGGTGAGAAACTaGCAGTGCTGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVITMVRN*QCWGGG
Trigger: CCCACCTCCCCAGCACTGCCAGTTTCTCACCATTGT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTGGTGGATCTTTTCATaGGCATGCATCTTGCCTACA +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRWWIFS*ACILPT
Trigger: TGTAGGCAAGATGCATGCTCATGAAAAGATCCACCA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp TTTCTGTCCACCAACTCAGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCAGAAAATTGCTAGGCTaGGAAATGCTATCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FLSTNSGFNPYWGQTLCFRKLLG*EMLSVD
Trigger: ATCCACTGATAGCATTTCTCAGCCTAGCAATTTTCT...GAAACATAGTGTCTGCCCCCAGTATGGATTAAAACCTGAGTTGGTGGACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATCCTATTTCCAAGCCTaGGTCCCTTCTCTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVISYFQA*VPSLVP
Trigger: CGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACATAGCCACATTCAGTaGACATGTAATCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGHSHIQ*TCNPWC
Trigger: ACACCAAGGATTACATGTGCACTGAATGTGGCTATG...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGATCCCAGCAGTACATaGAGACCGCCTTTATTCCCA +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLDPSST*RPPLFP
Trigger: TGGGAATAAAGGCGGTCTGCATGTACTGCTGGGATC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGTCGCTTCGCTTCTCTaGGCCTCAGCTTTCCTATCT +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIVASLL*ASAFLS
Trigger: AGATAGGAAAGCTGAGGCCCAGAGAAGCGAAGCGAC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGAGGTAGGAGACAGGTaGGCACCAGAGAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLEVGDR*APEKKY
Trigger: GTATTTCTTCTCTGGTGCCCACCTGTCTCCTACCTC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGATCTCCATGTTCCCTaGTCCCTCTTCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLDLHVP*SLFSCC
Trigger: ACAGCAACTGAAGAGGGACCAGGGAACATGGAGATC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGCTGGTGAAGAACTTCTaGCAGTTAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWLVKNF*QLGHWR
Trigger: CCTCCAGTGCCCTAACTGCCAGAAGTTCTTCACCAG...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAATCCTGGTAAGCCACTaGGTTGAAGGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIILVSH*VEGGKG
Trigger: CCCTTTGCCACCTTCAACCCAGTGGCTTACCAGGAT...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGTGCTTGCAGTTCTCATaGCTCAGCACAGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWCLQFS*LSTACL
Trigger: CAAGCAGGCTGTGCTGAGCCATGAGAACTGCAAGCA...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAGGAGGGCTCAGACACTaGCTTTTCCAGAAGGGGATT +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIGGLRH*LFQKGI
Trigger: AATCCCCTTCTGGAAAAGCCAGTGTCTGAGCCCTCC...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATGCTGTCTCAGCAGGTaGAGTTGTCTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLCCLSR*SCLEGS
Trigger: GGAACCTTCAAGACAACTCCACCTGCTGAGACAGCA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGAAGGACACAGAGTATaGCTTTTAAGAATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGEGHRV*LLRIRA
Trigger: TGCCCTGATTCTTAAAAGCCATACTCTGTGTCCTTC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGTTTCACGGGAAGGGTTaGTGTGCTGGCTTTAGACGG +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWFHGKG*CAGFRR
Trigger: CCGTCTAAAGCCAGCACACCAACCCTTCCCGTGAAA...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATCAGGCCTGATGGACTaGCAGGTAAGTCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLSGLMD*QVSPKK
Trigger: TTTCTTGGGACTTACCTGCCAGTCCATCAGGCCTGA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGCTACTGTCTCCACAATaGTCTCCATGTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWLLSPQ*SPCSLV
Trigger: GACCAGGGAACATGGAGATCATTGTGGAGACAGTAG...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGACAGGCATAGGTGTCTaGGTAGAAGTTGGAAATATC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRTGIGV*VEVGNI
Trigger: GATATTTCCAACTTCTACTCAGACACCTATGCCTGT...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR TCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAGTCTCCTTAGGGCCTTaGGTAATGACTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIVSLGP*VMTLTQ
Trigger: CTGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGAC...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTAGACAGGGATTTGGATaGATCTATAATGTAGTAACC +
Preference number: 4 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTRQGFG*IYNVVT
Trigger: GGTTACTACATTATAGATTCATCCAAATCCCTGTCT...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGCCAGACTTCCTGCGTaGTATCCAGAGTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIARLPA*YPEFFP
Trigger: TGGAAAGAACTCTGGATATCACGCAGGAAGTCTGGC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR TCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGATATCATCTTTCTCTaGAACCAAGGCCAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLDIIFL*NQGQAP
Trigger: AGGCGCTTGGCCTTGGTTTCAGAGAAAGATGATATC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATTGGAAATATCTTCATaGATGCTGGCCATGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLLEISS*MLAMWR
Trigger: CCGCCACATGGCCAGCATGCATGAAGATATTTCCAA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAATACCTGAGGTCCCCTaGATGTTTTCGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIIPEVP*MFSHVH
Trigger: GTGCACATGCGAAAACATGCAGGGGACCTCAGGTAT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAACTTGTAGAGACGAGTaGCCCCATGCCCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVITCRDE*PHALSH
Trigger: ATGTGAAAGGGCATGGGGGCACTCGTCTCTACAAGT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATGTAAGCACAATCGGTaGACTTGTAGAGACGAGTGC +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLCKHNR*TCRDEC
Trigger: GCACTCGTCTCTACAAGTGCACCGATTGTGCTTACA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGATCTCCATGTTCCCTaGTCCCTCTTCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIDLHVP*SLFSCC
Trigger: ACAGCAACTGAAGAGGGACCAGGGAACATGGAGATC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATGCTGTCTCAGCAGGTaGAGTTGTCTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVICCLSR*SCLEGS
Trigger: GGAACCTTCAAGACAACTCCACCTGCTGAGACAGCA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATACTCGGGACACTGGTATaGCTTCAGTCCTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFILGTLV*LQSCML
Trigger: AAGCATACAGGACTGAAGCCATACCAGTGTCCCGAG...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR TCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACACAGGCATAGGTGTCTaGGTAGAAGTTGGAAATATC +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNTGIGV*VEVGNI
Trigger: GATATTTCCAACTTCTACTCAGACACCTATGCCTGT...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp GATAGCCTATTAACAGTGTCTAGTTTTAGCTTTTGGAGCCAGCTGCCTAGCTTCTGTTTACGGAATAGGTaGTTATTGGAACAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: DSLLTVSSFSFWSQLPSFCLRNR*LLEQAK
Trigger: TTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACA...GAAGCTAGGCAGCTGGCTCCAAAAGCTAAAACTAGACACTGTTAATAGGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGTGTTTACGGAATAGGTaGTTATTGGAACAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKCLRNR*LLEQAK
Trigger: TTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACA...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATACATAGCCATGGGCCTTaGGTTTATGGAACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIHSHGP*VYGTRV
Trigger: CACTCTTGTTCCATAAACGCAAGGCCCATGGCTATG...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR GCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATACTCTTAAGAGAACACTaGACAGCACTCAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVILLREH*TALKVP
Trigger: GGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAG...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGTTATCCACAGCCTTTTaGGAGTCCTTCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWLSTAF*ESFWVS
Trigger: TGACACCCAGAAGGACTCCCAAAAGGCTGTGGATAA...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGCCTTGCGTTTATaGAACAAGAGTGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIWALRL*NKSVVL
Trigger: CAACACCACACTCTTGTTCCATAAACGCAAGGCCCA...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATCTTCTGTCGGTTCTTaGTGCTGTAAGCACAATCGG +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFISSVGS*CCKHNR
Trigger: CCGATTGTGCTTACAGCACCAAGAACCGACAGAAGA...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACATTAGCCTGGCATGGTaGCACATGACTATAGATAGT +
Preference number: 4 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNISLAW*HMTIDS
Trigger: ACTATCTATAGTCATGTGCCACCATGCCAGGCTAAT...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATACATGAGCATGCATCTTaGCTACATGATCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIHEHAS*LHDPGK
Trigger: CTTACCAGGATCATGTAGGCAAGATGCATGCTCATG...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGTGTCTGAGTAGAAGTTaGAAATATCTTCATGCATGC +
Preference number: 4 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRCLSRS*KYLHAC
Trigger: GCATGCATGAAGATATTTCCAACTTCTACTCAGACA...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAAAAGCTCCAGTGACCTaGGCAAATTACTTGCTTACT +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIKAPVT*ANYLLT
Trigger: AGTAAGCAAGTAATTTGCCCAGGTCACTGGAGCTTT...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAATATTATCGCTGTTCTaGGGAATCTTCAAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIILSLF*GIFKLD
Trigger: GTCAAGCTTGAAGATTCCCCAGAACAGCGATAATAT...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAAGTTCTTACAATTCCTaGCACACAGGAAGTGCTATA +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVISSYNS*HTGSAI
Trigger: TATAGCACTTCCTGTGTGCCAGGAATTGTAAGAACT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CCA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAAAAGAGAAGATGGAGTaGGTAAAATCCAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLKEKME*VKSRSY
Trigger: ATAAGATCTGGATTTTACCCACTCCATCTTCTCTTT...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CCA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAAATTTGGCTTCAATATaGTCTGTCATTGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVINLASI*SVIVGQ
Trigger: TTGCCCAACAATGACAGACCATATTGAAGCCAAATT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR GCA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGTTTACGGAATAGGTaGTTATTGGAACAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFICLRNR*LLEQAK
Trigger: TTTTGCTTGTTCCAATAAGCACCTATTCCGTAAACA...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS CCA 90 bp AGACCCAGAGCCGGCGGGAGCCGCATCTCTATGGTCGGCCGCGGCTaGAACGGCCCCCGGGGCCCGCTTTGTGCGACCGCCTCCGGCTCA +
Preference number: 5 (lower is better)
Translates to: RPRAGGSRISMVGRG*NGPRGPLCATASGS
Trigger: TGAGCCGGAGGCGGTCGCACAAAGCGGGCCCCGGGGGCCGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCCCGCCGGCTCTGGGTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000440934.2
ENST00000449707.5
ENST00000450560.1
ENST00000450765.5
CDS CCA 90 bp ACCTGGAAGGCTCCAGACCCAGAGCCGGCGGGAGCCGCATCTCTATaGTCGGCCGCGGCTGGAACGGCCCCCGGGGCCCGCTTTGTGCGA +
Preference number: 5 (lower is better)
Translates to: TWKAPDPEPAGAASL*SAAAGTAPGARFVR
Trigger: TCGCACAAAGCGGGCCCCGGGGGCCGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCCCGCCGGCTCTGGGTCTGGAGCCTTCCAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000450560.1
ENST00000450765.5
CDS CCA 90 bp GCTCACTCACCTCCAGACCCAGAGCCGGCGGGAGCCGCATCTCTATaGTCGGCCGCGGCTGGAACGGCCCCCGGGGCCCGCTTTGTGCGA +
Preference number: 5 (lower is better)
Translates to: AHSPPDPEPAGAASL*SAAAGTAPGARFVR
Trigger: TCGCACAAAGCGGGCCCCGGGGGCCGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCCCGCCGGCTCTGGGTCTGGAGGTGAGTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS CCA 90 bp GCTTTCCTATCTCCAGACCCAGAGCCGGCGGGAGCCGCATCTCTATaGTCGGCCGCGGCTGGAACGGCCCCCGGGGCCCGCTTTGTGCGA +
Preference number: 5 (lower is better)
Translates to: AFLSPDPEPAGAASL*SAAAGTAPGARFVR
Trigger: TCGCACAAAGCGGGCCCCGGGGGCCGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCCCGCCGGCTCTGGGTCTGGAGATAGGAAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449707.5
CDS GCA 90 bp CAGAACCGTGACGCGACTGCAGCGCCGGGGCCCAGCTCGTCTGGGTaGTCCCTTCAGTACCTCCTTCCGAGAGTTCCCAGCGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QNRDATAAPGPSSSG*SLQYLLPRVPSAQA
Trigger: GGCCTGGGCGCTGGGAACTCTCGGAAGGAGGTACTGAAGGGAGCACCCAGACGAGCTGGGCCCCGGCGCTGCAGTCGCGTCACGGTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS GCA 90 bp TTCCCAGCGCCCAGGCCCACCCTGATCCCGGGGCTCGAAAAACTTTaGCTCCAGCTCGCTCCACCCGCATTCCCTTCCCAGTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: FPAPRPTLIPGLEKL*LQLAPPAFPSQFRP
Trigger: GGGGCGGAACTGGGAAGGGAATGCGGGTGGAGCGAGCTGGAGGCAAAGTTTTTCGAGCCCCGGGATCAGGGTGGGCCTGGGCGCTGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS-3UTR CAA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGCTGGTTTGGGTCGGCTaGGTCAGGGTGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPLVWVG*VRVVPA
Trigger: CGCAGGCACCACCCTGACCAAGCCGACCCAAACCAG...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS CCA 90 bp GCCCGCTTTGTGCGACCGCCTCCGGCTCAGCCGCCTCTAGGATATTaGGGATGTGGAAGCCACTCTCTCTTCCTCTTGCCGGCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: ARFVRPPPAQPPLGY*GCGSHSLFLLPAAG
Trigger: CCCGGCAGCCGGCAAGAGGAAGAGAGAGTGGCTTCCACATCCCCAATATCCTAGAGGCGGCTGAGCCGGAGGCGGTCGCACAAAGCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS CCA 90 bp TCCTGTCTACACACAGGGCATGATAGGGGGCTAACTGGCGGGCTCTaGCCCTGCAGAGGGCCAGGGAGGGTTGGGTTGCTGGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SCLHTGHDRGLTGGL*PCRGPGRVGLLGGS
Trigger: GCTGCCTCCCAGCAACCCAACCCTCCCTGGCCCTCTGCAGGGCCAGAGCCCGCCAGTTAGCCCCCTATCATGCCCTGTGTGTAGACAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS TCA 90 bp CCTTCAGTACCTCCTTCCGAGAGTTCCCAGCGCCCAGGCCCACCCTaGTCCCGGGGCTCGAAAAACTTTGCCTCCAGCTCGCTCCACCCG +
Preference number: 5 (lower is better)
Translates to: PSVPPSESSQRPGPP*SRGSKNFASSSLHP
Trigger: CGGGTGGAGCGAGCTGGAGGCAAAGTTTTTCGAGCCCCGGGATCAGGGTGGGCCTGGGCGCTGGGAACTCTCGGAAGGAGGTACTGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS CCA 90 bp CAGGAGGGCGCGTGGTCTTGGACAGACACAGTCGCTTCGCTTCTCTaGGCCTCAGCTTTCCTATCTCCAGACCCAGAGCCGGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: QEGAWSWTDTVASLL*ASAFLSPDPEPAGA
Trigger: GGCTCCCGCCGGCTCTGGGTCTGGAGATAGGAAAGCTGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449707.5
CDS-3UTR CAA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTCGGAGGCGGGTATGCTaGCAGTTCTCATGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVRRRVC*QFSWLS
Trigger: GCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCG...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCTGCCCACACCCTGGTTaGGGTCGGCTTGGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: KARPSPWITTICTRPSSTCPHPG*GRLGQG
Trigger: ACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCA...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGGGCTCTCGGCGGCCTaGGCACCCAGTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLGLSAA*APSPGV
Trigger: CACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTTTCACCCCCTCGTGCTaGAGCCGCCGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVFTPSC*SRRCCC
Trigger: GCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAA...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCTTCACCCCCTCGTGCTaGAGCCGCCGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTAFTPSC*SRRCCC
Trigger: GCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAA...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTAAAGGCTGGGGTGCCTaGGTGGCAGCTGTTGACATG +
Preference number: 5 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVKGWGA*VAAVDM
Trigger: CATGTCAACAGCTGCCACCAAGGCACCCCAGCCTTT...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS CCA 90 bp TGTGCGACCGCCTCCGGCTCAGCCGCCTCTAGGATATTGGGGATGTaGAAGCCACTCTCTCTTCCTCTTGCCGGCTGCCGGGGTACTCTA +
Preference number: 5 (lower is better)
Translates to: CATASGSAASRILGM*KPLSLPLAGCRGTL
Trigger: TAGAGTACCCCGGCAGCCGGCAAGAGGAAGAGAGAGTGGCTTCCACATCCCCAATATCCTAGAGGCGGCTGAGCCGGAGGCGGTCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000450765.5
CDS-3UTR CAA 90 bp CCCCACACTCAAGCCGTGGGTGCTGTTTACGGGTGTGTCCTCGTAAGCTGGCAGCACTCTCTCTTCCTCTaGCCGGCTGCCGGGGTACTC +
Preference number: 5 (lower is better)
Translates to: PHTQAVGAVYGCVLVSWQHSLFL*PAAGVL
Trigger: GAGTACCCCGGCAGCCGGCAAGAGGAAGAGAGAGTG...CTGCCAGCTTACGAGGACACACCCGTAAACAGCACCCACGGCTTGAGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGGGGGAATCTTCAAGCTaGACCATACATGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPGESSS*TIHGLR
Trigger: CCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCCC...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGAGCTCATACTTCCGCTaGCAGGCGAAGGCACACACC +
Preference number: 5 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVSSYFR*QAKAHT
Trigger: GGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCT...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATTCACCCCCTCGTGCTaGAGCCGCCGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPFTPSC*SRRCCC
Trigger: GCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCTTCACCCCCTCGTGCTaGAGCCGCCGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLFTPSC*SRRCCC
Trigger: GCAGCAGCACCGGCGGCTCAAGCACGAGGGGGTGAA...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGAAGCGCAGTTTCGAGTaGGTACCAAACGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPKRSFE*VPNVWG
Trigger: CCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTT...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGCGCGTCTTGAAGGCCTaGCCACACTGCTCACACATG +
Preference number: 5 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVRVLKA*PHCSHM
Trigger: CATGTGTGAGCAGTGTGGCAAGGCCTTCAAGACGCG...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCGGGGTGGTGGGGTCTTaGCCCACACCCTGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTAGVVGS*PTPWFG
Trigger: CCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCC...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGGTGAGCCAGCCCCTTaGGCCCCTGGCCAATACCCC +
Preference number: 5 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQGEPAP*APGQYP
Trigger: GGGGTATTGGCCAGGGGCCAAAGGGGCTGGCTCACC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS GCA 90 bp CTAGAGAGGCCCTGCACAGGCTGTATATGGGTCTCACTGCACTGGTaGAGGGCCAGCAGAGTGGGCTCTGCGAAGCTCTGTTCACAGCGC +
Preference number: 5 (lower is better)
Translates to: LERPCTGCIWVSLHW*RASRVGSAKLCSQR
Trigger: GCGCTGTGAACAGAGCTTCGCAGAGCCCACTCTGCTGGCCCTGCACCAGTGCAGTGAGACCCATATACAGCCTGTGCAGGGCCTCTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS CCA 90 bp GGGCTAGAGAGGCCCTGCACAGGCTGTATATGGGTCTCACTGCACTaGTGCAGGGCCAGCAGAGTGGGCTCTGCGAAGCTCTGTTCACAG +
Preference number: 5 (lower is better)
Translates to: GLERPCTGCIWVSLH*CRASRVGSAKLCSQ
Trigger: CTGTGAACAGAGCTTCGCAGAGCCCACTCTGCTGGCCCTGCACCAGTGCAGTGAGACCCATATACAGCCTGTGCAGGGCCTCTCTAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS-3UTR CAA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: LLQQVGAEAALLLEASPTAAVWL*RCSFRA
Trigger: GGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGC...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACTTCTGGCTCCTGGCTaGCATAGCGGAGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GHSGTHGGGYACSSHGSALLAPG*HSGAAR
Trigger: CCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAAG...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCAAATCTGGTGGGGGTGTaGGGCCCTGCATGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: GHSGTHGGGYACSSHGSANLVGV*GPAWPL
Trigger: AAGGGGCCATGCAGGGCCCAACACCCCCACCAGATT...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCGGGCTCTCGGCGGCCTaGGCACCCAGTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFGLSAA*APSPGV
Trigger: CACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCC...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGGCTGAGGCCGCGTTGTaGCTTGAAGCTAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGAEAAL*LEASPT
Trigger: TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGC...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCTCGGCGGCCTTGGCACCCAGTCCTGGAGTGCAGATTCAGGGCCTTCTCCCGTTTATCCACAGCCTTTaGGGAGTCCTTCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: LSAALAPSPGVQIQGLLPFIHSL*GVLLGV
Trigger: GACACCCAGAAGGACTCCCAAAAGGCTGTGGATAAA...CGGGAGAAGGCCCTGAATCTGCACTCCAGGACTGGGTGCCAAGGCCGCCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGGGACACATATGGGTCTaGAAGAGGGACTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: HRVWPHCACEGGCAAGSAGHIWV*KRDSVP
Trigger: TGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCC...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGCTGGCCATGTGGCGGTaGAGTGCATTCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGLAMWR*SAFLST
Trigger: GGTGGAGAGGAATGCACTCAACCGCCACATGGCCAG...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGCTGGCCATGTGGCGGTaGAGTGCATTCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGLAMWR*SAFLST
Trigger: GGTGGAGAGGAATGCACTCAACCGCCACATGGCCAG...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: KASLSLGSELLRLALVPVAAVWL*RCSFRA
Trigger: GGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGCGGAGGCGGGTATGCTaGCAGTTCTCATGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGRRRVC*QFSWLS
Trigger: GCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCG...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTAATCTGGTGGGGGTGTaGGGCCCTGCATGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSANLVGV*GPAWPL
Trigger: AAGGGGCCATGCAGGGCCCAACACCCCCACCAGATT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCCAGACTCCTCGAGGGGGCAGCCCCGGATCTGGTGAGTCCTCAGAGCCCGTTAAGGTTCCTACCCAGTaGTTAGGAGCCTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: LQTPRGGSPGSGESSEPVKVPTQ*LGASSK
Trigger: CTTAGAGGAGGCTCCTAACAACTGGGTAGGAACCTT...AACGGGCTCTGAGGACTCACCAGATCCGGGGCTGCCCCCTCGAGGAGTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACAAGGCCGCGTTGTTGCTaGAAGCTAGCCCCACACTCG +
Preference number: 5 (lower is better)
Translates to: LLQQVGAEAALLLEASPTRPRCC*KLAPHS
Trigger: CGAGTGTGGGGCTAGCTTCAAGCAACAACGCGGCCT...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGAAAGGCTGGGGTGCCTaGGTGGCAGCTGTTGACATG +
Preference number: 5 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGKGWGA*VAAVDM
Trigger: CATGTCAACAGCTGCCACCAAGGCACCCCAGCCTTT...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGATCCGCATGTGGTACTaGAGACGAGAGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: AQASSPAESTVAHIAHIGIRMWY*RREGSA
Trigger: TGCTGATCCCTCTCGTCTCAAGTACCACATGCGGAT...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGTACTTCCGTTCCTCCTaGTGGATCCGCATGTGGTAC +
Preference number: 5 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVYFRSS*WIRMWY
Trigger: GTACCACATGCGGATCCACAAGGAGGAACGGAAGTA...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGCCATGCTGCGTTAGCAGGAAGCGCGTCTaGAAGGCCTTGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: GGRHYVSGCWCLNLPCCVSRKRV*KALPHC
Trigger: GCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGCT...AACGCAGCATGGCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCTTGGCCTCACTGTGCTaGCGAAGGTGGGTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTLASLC*RRWVRS
Trigger: GCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAA...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS TCA 90 bp ACACAGCCAGATTCTGGGCAGGAGAAGGTGTCAGGAGTGCCCCGGTaGATCTTGAAGTGGCTCTTCAGGGCCTGGGGTTGGGCAAACTCC +
Preference number: 5 (lower is better)
Translates to: TQPDSGQEKVSGVPR*ILKWLFRAWGWANS
Trigger: GGAGTTTGCCCAACCCCAGGCCCTGAAGAGCCACTTCAAGATTCACCGGGGCACTCCTGACACCTTCTCCTGCCCAGAATCTGGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS CCA 90 bp AGCTGGATCATAAGAGCCAGCGAACTGGAAAGGCGGTTTGTAACCTaGAAGGCTCCAGACCCAGAGCCGGCGGGAGCCGCATCTCTATGG +
Preference number: 5 (lower is better)
Translates to: SWIIRASELERRFVT*KAPDPEPAGAASLW
Trigger: CCATAGAGATGCGGCTCCCGCCGGCTCTGGGTCTGGAGCCTTCCAGGTTACAAACCGCCTTTCCAGTTCGCTGGCTCTTATGATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000450560.1
ENST00000450765.5
CDS CCA 90 bp GGCACCAGAGAAGAAATACGCTTATCTTCCGGGCAGGAGGGCGCGTaGTCTTGGACAGACACAGTCGCTTCGCTTCTCTGGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GTREEIRLSSGQEGA*SWTDTVASLLWASA
Trigger: AGCTGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCCGGAAGATAAGCGTATTTCTTCTCTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGGGCTGGGATCCTCCAGCTGCACATCATGCAGGTGCACTGTGGGGGTGGTGTTTATCCACAGCCTTTaGGGAGTCCTTCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: GGLGSSSCTSCRCTVGVVFIHSL*GVLLGV
Trigger: GACACCCAGAAGGACTCCCAAAAGGCTGTGGATAAA...CACCACCCCCACAGTGCACCTGCATGATGTGCAGCTGGAGGATCCCAGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CGCAGTGCATCAGCCCGGTTGGTGCAGTACTCACACTCGGGACACTGGTATGGCCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: RSASARLVQYSHSGHWYGRSRWV*SLLLLV
Trigger: CACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCG...GCCATACCAGTGTCCCGAGTGTGAGTACTGCACCAACCGGGCTGATGCACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTACCAGGCCCACCCGCTCCCTGGGCAGTGGCAAAGTaGCACTCAGGACACTGGTGG +
Preference number: 5 (lower is better)
Translates to: LKSPHAVPGSALPGPPAPWAVAK*HSGHWW
Trigger: CCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCA...GGGAGCGGGTGGGCCTGGTAAAGCACTACCTGGAACAGCATGAGGAGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: GHSGTHGGGYACSSHGSARMSTL*WAVAKL
Trigger: CAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCG...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCACACATGAAAGCCCGTGCTTCTCGATGCCGGGTCTCCTGGTGCACACGCAGTCGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SHMKARASRCRVSWCTRSRMSTL*WAVAKL
Trigger: CAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCG...ACTGCGTGTGCACCAGGAGACCCGGCATCGAGAAGCACGGGCTTTCATGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCAAGCTCATACTTCCGCTaGCAGGCGAAGGCACACACC +
Preference number: 5 (lower is better)
Translates to: GHSGTHGGGYACSSHGSASSYFR*QAKAHT
Trigger: GGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCT...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCCGGAGGCGGGTATGCTaGCAGTTCTCATGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVRRRVC*QFSWLS
Trigger: GCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCG...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATAATCTGGTGGGGGTGTaGGGCCCTGCATGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYNLVGV*GPAWPL
Trigger: AAGGGGCCATGCAGGGCCCAACACCCCCACCAGATT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TGCCTGTGTGTCGGGACTGGTGAGCCTCTAACCGGTACCGTCTGGTGGTCGAAAGGGCTGACAGCTGGTTaGAGGGCTCTGAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: CLCVGTGEPLTGTVWWSKGLTAG*RALNLV
Trigger: CACCAGATTCAGAGCCCTCAAACCAGCTGTCAGCCC...TTTCGACCACCAGACGGTACCGGTTAGAGGCTCACCAGTCCCGACACACAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTTGTAGTTGCAGAGGCGGCAAAAGAAGGGGTGGCGGTCGGTGTGGGTGAGGGCCTAAGGATGGAGGATTaGTGGAGGGCTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: LVVAEAAKEGVAVGVGEGLRMED*WRAQTL
Trigger: CAGTGTCTGAGCCCTCCACAAATCCTCCATCCTTAG...GCCCTCACCCACACCGACCGCCACCCCTTCTTTTGCCGCCTCTGCAACTACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTAGGCCGCGTTGTTGCTaGAAGCTAGCCCCACACTCG +
Preference number: 5 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSARPRCC*KLAPHS
Trigger: CGAGTGTGGGGCTAGCTTCAAGCAACAACGCGGCCT...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCGCTGAGGCCGCGTTGTaGCTTGAAGCTAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: KASLSLGSELLRLALVPVAEAAL*LEASPT
Trigger: TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGC...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CATAGGGTTTGGCCTCACTGTGCTTGCGAAGGTGGGTGCGCAGCAGGAAGCGCGAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCC +
Preference number: 5 (lower is better)
Translates to: HRVWPHCACEGGCAAGSASPLLL*NQNCIP
Trigger: GGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCT...CGCGCTTCCTGCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAAACCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAAGCAGGAAGCGCGTCTaGAAGGCCTTGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPSRKRV*KALPHC
Trigger: GCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGCT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTTTGGCCTCACTGTGCTaGCGAAGGTGGGTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSLASLC*RRWVRS
Trigger: GCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAA...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTTGGCCTCACTGTGCTaGCGAAGGTGGGTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYLASLC*RRWVRS
Trigger: GCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACCTGGTTTGGGTCGGCTaGGTCAGGGTGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNLVWVG*VRVVPA
Trigger: CGCAGGCACCACCCTGACCAAGCCGACCCAAACCAG...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTGCCCACACCCTGGTTaGGGTCGGCTTGGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQACPHPG*GRLGQG
Trigger: ACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCA...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCGGGGTGGTGGGGTCTTaGCCCACACCCTGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: PSICCQIVAQAPISKPESGVVGS*PTPWFG
Trigger: CCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCC...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS TCA 90 bp CAGATTCTGGGCAGGAGAAGGTGTCAGGAGTGCCCCGGTGAATCTTaGAGTGGCTCTTCAGGGCCTGGGGTTGGGCAAACTCCTGTCTAC +
Preference number: 5 (lower is better)
Translates to: QILGRRRCQECPGES*SGSSGPGVGQTPVY
Trigger: GTAGACAGGAGTTTGCCCAACCCCAGGCCCTGAAGAGCCACTTCAAGATTCACCGGGGCACTCCTGACACCTTCTCCTGCCCAGAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS GCA 90 bp TATATGGGTCTCACTGCACTGGTGCAGGGCCAGCAGAGTGGGCTCTaGGAAGCTCTGTTCACAGCGCTCACAGAAGTACACCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: YMGLTALVQGQQSGL*EALFTALTEVHLHH
Trigger: GTGGTGGAGGTGTACTTCTGTGAGCGCTGTGAACAGAGCTTCGCAGAGCCCACTCTGCTGGCCCTGCACCAGTGCAGTGAGACCCATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS CCA 90 bp GGTCAGGGTTCCAGCTACTGTCTCCACAATGATCTCCATGTTCCCTaGTCCCTCTTCAGTTGCTGTGGCCTCTACCAGCAGGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GQGSSYCLHNDLHVP*SLFSCCGLYQQAAW
Trigger: CCAGGCTGCCTGCTGGTAGAGGCCACAGCAACTGAAGAGGGACCAGGGAACATGGAGATCATTGTGGAGACAGTAGCTGGAACCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS CCA 90 bp CAGGCTGTATATGGGTCTCACTGCACTGGTGCAGGGCCAGCAGAGTaGGCTCTGCGAAGCTCTGTTCACAGCGCTCACAGAAGTACACCT +
Preference number: 5 (lower is better)
Translates to: QAVYGSHCTGAGPAE*ALRSSVHSAHRSTP
Trigger: AGGTGTACTTCTGTGAGCGCTGTGAACAGAGCTTCGCAGAGCCCACTCTGCTGGCCCTGCACCAGTGCAGTGAGACCCATATACAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS CCA 90 bp GCCAAGGAGGACGCTGAGCCGTCAAGATTAAGAACCTTCACCGCGTaGTCTTGGACAGACACAGTCGCTTCGCTTCTCTGGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: AKEDAEPSRLRTFTA*SWTDTVASLLWASA
Trigger: AGCTGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGGTGAAGGTTCTTAATCTTGACGGCTCAGCGTCCTCCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433921.5
CDS-3UTR CAA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACCTTCAGGGCCTGGGGTaGGGCAAACTCCTGTCTACA +
Preference number: 5 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDLQGLG*GKLLST
Trigger: TGTAGACAGGAGTTTGCCCAACCCCAGGCCCTGAAG...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GCGCAGGCCAGCAGCCCAGCGGAAAGCACGGTGGCACACATTGCACACATAGGGAGATGGGTCTTGAGCTaGCTCTTACTGGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: AQASSPAESTVAHIAHIGRWVLS*LLLVKN
Trigger: GTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCT...CCCTATGTGTGCAATGTGTGCCACCGTGCTTTCCGCTGGGCTGCTGGCCTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCACAGCCCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: QWNSRRRVCLQFSWLSTARSRWV*SLLLLV
Trigger: CACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCG...GGCTGTGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTCTGGCCATGTGGCGGTaGAGTGCATTCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQALAMWR*SAFLST
Trigger: GGTGGAGAGGAATGCACTCAACCGCCACATGGCCAG...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACAGCTCATACTTCCGCTaGCAGGCGAAGGCACACACC +
Preference number: 5 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDSSYFR*QAKAHT
Trigger: GGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCT...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCACTTCTGGCTCCTGGCTaGCATAGCGGAGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GSTGESADLWRSSRHSTALLAPG*HSGAAR
Trigger: CCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAAG...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCCTTCTGGCTCCTGGCTaGCATAGCGGAGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: SAHLRPYPLPIQEVGQAFLLAPG*HSGAAR
Trigger: CCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAAG...GAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTGGGCTGACAGCTGGTTaGAGGGCTCTGAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAGLTAG*RALNLV
Trigger: CACCAGATTCAGAGCCCTCAAACCAGCTGTCAGCCC...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAGGCTCGCCCCTCTCCCTGGATCACTACCATCTGCACCCGCCCCTCTAGCACCTGTCTCCTTAGGGCCTaGAGTAATGACTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: KARPSPWITTICTRPSSTCLLRA*SNDSDS
Trigger: TGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACA...GGTGCTAGAGGGGCGGGTGCAGATGGTAGTGATCCAGGGAGAGGGGCGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGGGCTCTCGGCGGCCTaGGCACCCAGTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIGLSAA*APSPGV
Trigger: CACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCGGTGCTGAGGCCGCGTaGTTGCTTGAAGCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFGAEAA*LLEASP
Trigger: GGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACC...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGGAGCAGAGTCCCCATaGCTCAACGGGGACACATCA +
Preference number: 5 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLGAESP*LNGDTS
Trigger: TGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTCC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAAGTGCATCAGCCCGGTaGGTGCAGTACTCACACTCG +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPSASAR*VQYSHS
Trigger: CGAGTGTGAGTACTGCACCAACCGGGCTGATGCACT...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGCGCGTCTTGAAGGCCTaGCCACACTGCTCACACATG +
Preference number: 5 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQRVLKA*PHCSHM
Trigger: CATGTGTGAGCAGTGTGGCAAGGCCTTCAAGACGCG...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TGCTCAGCTGATCAGCCCGGTGACAGCGATAGGAGCACTGGTTGCACTGATACCCGCGTCTTGAAGGCCTaGCCACACTGCTCACACATG +
Preference number: 5 (lower is better)
Translates to: CSADQPGDSDRSTGCTDTRVLKA*PHCSHM
Trigger: CATGTGTGAGCAGTGTGGCAAGGCCTTCAAGACGCG...GGTATCAGTGCAACCAGTGCTCCTATCGCTGTCACCGGGCTGATCAGCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCGCGTCTTGAAGGCCTaGCCACACTGCTCACACATG +
Preference number: 5 (lower is better)
Translates to: KASLSLGSELLRLALVPVRVLKA*PHCSHM
Trigger: CATGTGTGAGCAGTGTGGCAAGGCCTTCAAGACGCG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTAGCAGGAAGCGCGTCTaGAAGGCCTTGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSSRKRV*KALPHC
Trigger: GCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGCT...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGTGCCCACACCCTGGTTaGGGTCGGCTTGGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARCPHPG*GRLGQG
Trigger: ACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCA...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS TCA 90 bp GAAAGGCGGTTTGTAACCTGGAAGGCTTGGGATGGAGCATCGTCATaGTTTTGTCCTGAGAGCAGCAGGTACCCGGGCGGGGTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: ERRFVTWKAWDGASS*FCPESSRYPGGVQN
Trigger: GTTCTGGACCCCGCCCGGGTACCTGCTGCTCTCAGGACAAAATCATGACGATGCTCCATCCCAAGCCTTCCAGGTTACAAACCGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS-3UTR CAA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCGGGGAATCTTCAAGCTaGACCATACATGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVGESSS*TIHGLR
Trigger: CCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCCC...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTTCTTCAGCAGGTGGGTGCTGAGGCCGCGTTGTTGCTTGAAGCTAGCCCCACATGCTGCCGGAAGAGTTaGACGTTGGAGCCTATGAAG +
Preference number: 5 (lower is better)
Translates to: LLQQVGAEAALLLEASPTCCRKS*TLEPMK
Trigger: CTTCATAGGCTCCAACGTCAAACTCTTCCGGCAGCA...TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACCCACCTGCTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQRSRWV*SLLLLV
Trigger: CACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCG...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCGCAGCAGATGGGTCTaGAGCTTGCTCTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: KASLSLGSELLRLALVPVRSRWV*SLLLLV
Trigger: CACCAGTAAGAGCAAGCTCAAGACCCATCTGCTGCG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGGGTGGCCCTGCTTCTaGTGTTTACGGAATAGGTGC +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPGWPCF*CLRNRC
Trigger: GCACCTATTCCGTAAACACAAGAAGCAGGGCCACCC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTGGGCAGTGGCAAAGTaGCACTCAGGACACTGGTGG +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYWAVAK*HSGHWW
Trigger: CCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGCCTCTGCTTGTTCTTaGTCCTGTCTCCTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLASACS*SCLLRA
Trigger: GGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGGTGCTGAGGCCGCGTaGTTGCTTGAAGCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSHPCTPKASLSLGSELLGAEAA*LLEASP
Trigger: GGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACAAGCGCAGTTTCGAGTaGGTACCAAACGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDKRSFE*VPNVWG
Trigger: CCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTT...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATAAAGGCTGGGGTGCCTaGGTGGCAGCTGTTGACATG +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYKGWGA*VAAVDM
Trigger: CATGTCAACAGCTGCCACCAAGGCACCCCAGCCTTT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATAGTGCATCAGCCCGGTaGGTGCAGTACTCACACTCG +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYSASAR*VQYSHS
Trigger: CGAGTGTGAGTACTGCACCAACCGGGCTGATGCACT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCAGCAGGAAGCGCGTCTaGAAGGCCTTGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFSRKRV*KALPHC
Trigger: GCAGTGTGGCAAGGCCTTCAAGACGCGCTTCCTGCT...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTTGTCCCGGCTCAGTACACCCTGCCTaGGACCTGCATGCAACAAGG +
Preference number: 5 (lower is better)
Translates to: RLWPRLLFPSLSPFSCPGSVHPA*DLHATR
Trigger: CCTTGTTGCATGCAGGTCCAAGGCAGGGTGTACTGA...GCCGGGACAAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS GCA 90 bp GGGGGTCTGTCATCACCACCGACTTGTGTGTTTTGGCTTCTTAAATaGGCGTGGTCTTGGACAGACACAGTCGCTTCGCTTCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GGLSSPPTCVFWLLK*AWSWTDTVASLLWA
Trigger: GGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCATTTAAGAAGCCAAAACACACAAGTCGGTGGTGATGACAGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450560.1
CDS CCA 90 bp CTGCAGACCCTTGCGATCTTCAGCAGAGAACACACAGCCAGATTCTaGGCAGGAGAAGGTGTCAGGAGTGCCCCGGTGAATCTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LQTLAIFSREHTARF*AGEGVRSAPVNLEV
Trigger: CACTTCAAGATTCACCGGGGCACTCCTGACACCTTCTCCTGCCCAGAATCTGGCTGTGTGTTCTCTGCTGAAGATCGCAAGGGTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS-3UTR CAA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGAATCTTCAAGCTaGACCATACATGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDGESSS*TIHGLR
Trigger: CCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCCC...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGACACATATGGGTCTaGAAGAGGGACTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDGHIWV*KRDSVP
Trigger: TGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCC...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTAATCTGGTGGGGGTGTaGGGCCCTGCATGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSNLVGV*GPAWPL
Trigger: AAGGGGCCATGCAGGGCCCAACACCCCCACCAGATT...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAGGGCTGACAGCTGGTTaGAGGGCTCTGAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: GSTGESADLWRSSRHSTAGLTAG*RALNLV
Trigger: CACCAGATTCAGAGCCCTCAAACCAGCTGTCAGCCC...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGGCAGGTGGAGTTGTCTaGAAGGTTCCTACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQAGGVV*KVPTQL
Trigger: CAACTGGGTAGGAACCTTCAAGACAACTCCACCTGC...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CTTCTTGTGATGCAGGTGGGGGCTTCCCACTTTCTGTGTCCTCTGAGGCCTGGGCACCAATGCCTCTGCTaGTTCTTTGTCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLVMQVGASHFLCPLRPGHQCLC*FFVLSP
Trigger: AGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTG...CCCAGGCCTCAGAGGACACAGAAAGTGGGAAGCCCCCACCTGCATCACAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CACCCTCTTGTGGGCAGTGGCAAAGTTGCACTCAGGACACTGGTGGATCTTTTCGGAGCAGAGTCCCCATaGCTCAACGGGGACACATCA +
Preference number: 5 (lower is better)
Translates to: HPLVGSGKVALRTLVDLFGAESP*LNGDTS
Trigger: TGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTCC...GAAAAGATCCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCACAAGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCC +
Preference number: 5 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLSPLLL*NQNCIP
Trigger: GGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCT...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGAAAGGCTGGGGTGCCTaGGTGGCAGCTGTTGACATG +
Preference number: 5 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARKGWGA*VAAVDM
Trigger: CATGTCAACAGCTGCCACCAAGGCACCCCAGCCTTT...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCTATGTGAGTGCATCAGCCCGGTaGGTGCAGTACTCACACTCG +
Preference number: 5 (lower is better)
Translates to: EMDICDGHFRQNGGCGYVSASAR*VQYSHS
Trigger: CGAGTGTGAGTACTGCACCAACCGGGCTGATGCACT...CACATAGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGGTAGACAAAGGAGCTaGGAAGTAGGGAGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPGRQRS*EVGSRS
Trigger: TGACCTGCTCCCTACTTCCAAGCTCCTTTGTCTACC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACAAATCCAAGCCCATCTaGTGTCCAGCCCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDKSKPI*CPALSS
Trigger: GGAAGAGAGGGCTGGACACAAGATGGGCTTGGATTT...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp AAAGGGACATGTAGGGCAGGAGAAGCGAGCCCCCTTCTGCTTTTGAACCAGAACGGGTGGCCCTGCTTCTaGTGTTTACGGAATAGGTGC +
Preference number: 5 (lower is better)
Translates to: KGTCRAGEASPLLLLNQNGWPCF*CLRNRC
Trigger: GCACCTATTCCGTAAACACAAGAAGCAGGGCCACCC...GTTCTGGTTCAAAAGCAGAAGGGGGCTCGCTTCTCCTGCCCTACATGTCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTCTGCACATCTCAGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTGCAGGTGGAGTTGTCTaGAAGGTTCCTACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: QSAHLRPYPLPIQEVGQAAGGVV*KVPTQL
Trigger: CAACTGGGTAGGAACCTTCAAGACAACTCCACCTGC...AGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGCACCAATGCCTCTGCTaGTTCTTTGTCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQHQCLC*FFVLSP
Trigger: AGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTG...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTGGTCTGGGCAAGCCCTaGTTCTTTCTGAGTAGAACA +
Preference number: 5 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAGLGKP*FFLSRT
Trigger: TGTTCTACTCAGAAAGAACAAGGGCTTGCCCAGACC...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGGTCTGGGCAAGCCCTaGTTCTTTCTGAGTAGAACA +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPGLGKP*FFLSRT
Trigger: TGTTCTACTCAGAAAGAACAAGGGCTTGCCCAGACC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AACCAAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCC +
Preference number: 5 (lower is better)
Translates to: NQGQAPHQGGWSGPKWRDSPLLL*NQNCIP
Trigger: GGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCT...ATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GGGCACAGTGGAACTCACGGAGGCGGGTATGCTTGCAGTTCTCATGGCTCAGCAAAGTGGGTAGGTGTTTaGTCATGTACCCTTAACCGG +
Preference number: 5 (lower is better)
Translates to: GHSGTHGGGYACSSHGSAKWVGV*SCTLNR
Trigger: CCGGTTAAGGGTACATGACAAAACACCTACCCACTT...TGCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCGTGAGTTCCACTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATATCCGCATGTGGTACTaGAGACGAGAGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYIRMWY*RREGSA
Trigger: TGCTGATCCCTCTCGTCTCAAGTACCACATGCGGAT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGTTCAGTCCTGTATGCTaGGTCATGTGGTATTTCAGC +
Preference number: 5 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGFSPVC*VMWYFS
Trigger: GCTGAAATACCACATGACCAAGCATACAGGACTGAA...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCCTGGGGCCCTCAGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACGACCACCTGGAACTTTaGCTTGGCCTTGTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: LLGPSVAMNMQTAGLEMDDHLEL*LGLVVA
Trigger: TGCAACTACAAGGCCAAGCAAAAGTTCCAGGTGGTC...GTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTGAGGGCCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GGAGAGCCGGGAACAAAGGAATGGGCAGGAGTTGCAGTGAAACTTGCCCTGCTCGACCACCTGGAACTTTaGCTTGGCCTTGTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: GEPGTKEWAGVAVKLALLDHLEL*LGLVVA
Trigger: TGCAACTACAAGGCCAAGCAAAAGTTCCAGGTGGTC...GAGCAGGGCAAGTTTCACTGCAACTCCTGCCCATTCCTTTGTTCCCGGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATTTGTCCGTCTATCTGTaGTCAGATTGTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYLSVYL*SDCGPG
Trigger: GCCTGGGCCACAATCTGACAACAGATAGACGGACAA...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS CCA 90 bp CTGTCATCACCACCGACTTGTGTGTTTTGGCTTCTTAAATGCGCGTaGTCTTGGACAGACACAGTCGCTTCGCTTCTCTGGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LSSPPTCVFWLLKCA*SWTDTVASLLWASA
Trigger: AGCTGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCATTTAAGAAGCCAAAACACACAAGTCGGTGGTGATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450560.1
CDS-3UTR CAA 90 bp CAGTCCCAGGGGCCTGAACTCCATAGGGGCTGTTTCAGTGACCTCCTCAAGGGGCGGAATAGGTGCTTATaGGAACAAGCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: QSQGPELHRGCFSDLLKGRNRCL*EQAKSQ
Trigger: CTGTGATTTTGCTTGTTCCAATAAGCACCTATTCCG...CCCCTTGAGGAGGTCACTGAAACAGCCCCTATGGAGTTCAGGCCCCTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCGGGTGGCCCTGCTTCTaGTGTTTACGGAATAGGTGC +
Preference number: 5 (lower is better)
Translates to: SSHPCTPKASLSLGSELLGWPCF*CLRNRC
Trigger: GCACCTATTCCGTAAACACAAGAAGCAGGGCCACCC...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AGACCATACCCTCTTCCTATACAGGAGGTGGGGCAGGCTTTCAGCCCTCAGGTCTGTCTCCTTAGGGCCTaGAGTAATGACTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: RPYPLPIQEVGQAFSPQVCLLRA*SNDSDS
Trigger: TGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACA...GACCTGAGGGCTGAAAGCCTGCCCCACCTCCTGTATAGGAAGAGGGTATGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCTTCAGCTGTCTCCTGCCCAGGCAAGGGTGTACCTGCTTCCTGTGAAGGTTCTCACCAATGCCTCTGCTaGTTCTTTGTCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SSAVSCPGKGVPASCEGSHQCLC*FFVLSP
Trigger: AGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTG...AGAACCTTCACAGGAAGCAGGTACACCCTTGCCTGGGCAGGAGACAGCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGGGCTCTCGGCGGCCTaGGCACCCAGTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRGLSAA*APSPGV
Trigger: CACTCCAGGACTGGGTGCCAAGGCCGCCGAGAGCCC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAATCCGCATGTGGTACTaGAGACGAGAGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: GSTGESADLWRSSRHSTAIRMWY*RREGSA
Trigger: TGCTGATCCCTCTCGTCTCAAGTACCACATGCGGAT...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGTTGGCCTCACTGTGCTaGCGAAGGTGGGTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRLASLC*RRWVRS
Trigger: GCTGCGCACCCACCTTCGCAAGCACAGTGAGGCCAA...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTGCCTGCGTACGTGCTaGACCACCTGGAACTTTTGC +
Preference number: 5 (lower is better)
Translates to: SSHPCTPKASLSLGSELLCLRTC*TTWNFC
Trigger: GCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCACTGGTTTGGGTCGGCTaGGTCAGGGTGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPLVWVG*VRVVPA
Trigger: CGCAGGCACCACCCTGACCAAGCCGACCCAAACCAG...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCTGGTTTGGGTCGGCTaGGTCAGGGTGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLVWVG*VRVVPA
Trigger: CGCAGGCACCACCCTGACCAAGCCGACCCAAACCAG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCACTGTGTGAAGGCAGGTaGCAACTAGAAATTCAGAGG +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPLCEGR*QLEIQR
Trigger: CCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAG...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATCCACTGCATTCCAGCTaGGTCAAGAGTATGATCGTG +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYPLHSS*VKSMIV
Trigger: CACGATCATACTCTTGACCAAGCTGGAATGCAGTGG...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGGGCAGAGGTTTAGGTaGGATGGCCATTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPGQRFR*DGHYLL
Trigger: AAGAAGATAATGGCCATCCAACCTAAACCTCTGCCC...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TCCCACCCCCAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGCTATCTGTTGTCAGATaGTGGCCCAGGCTCCTATTT +
Preference number: 5 (lower is better)
Translates to: SHPQVVTCPLFCPSICCQLSVVR*WPRLLF
Trigger: AAATAGGAGCCTGGGCCACAATCTGACAACAGATAG...CTGACAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTGGGGGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATGGGGTACTCTATGTTTaGTCTCTGTGGTTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYGVLYV*SLWFFP
Trigger: CGGGAAAAACCACAGAGACAAAACATAGAGTACCCC...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000450765.5
CDS-3UTR CAA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGCCGCCTCTAGGATATaGGGGATGTGGAAGCCACTC +
Preference number: 5 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIAASRI*GMWKPL
Trigger: GAGTGGCTTCCACATCCCCAATATCCTAGAGGCGGC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTTGGTGCTGCAGACCCTaGCGATCTTCAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSWCCRP*RSSAEN
Trigger: GTTCTCTGCTGAAGATCGCAAGGGTCTGCAGCACCA...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTCGGAAGAGTTTGACGTaGGAGCCTATGAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: DQRGVHCGSTGESADLWRRKSLT*EPMKLQ
Trigger: CTGCAGCTTCATAGGCTCCAACGTCAAACTCTTCCG...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGCGGAAGAGTTTGACGTaGGAGCCTATGAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVRKSLT*EPMKLQ
Trigger: CTGCAGCTTCATAGGCTCCAACGTCAAACTCTTCCG...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTAAVWL*RCSFRA
Trigger: GGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGC...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp AAGGCCAAGCGCCTCATCAAGGAGGCTGGTCAGGACCAAAATGGAGGGATGGGGCGGAATAGGTGCTTATaGGAACAAGCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: KAKRLIKEAGQDQNGGMGRNRCL*EQAKSQ
Trigger: CTGTGATTTTGCTTGTTCCAATAAGCACCTATTCCG...CCCCATCCCTCCATTTTGGTCCTGACCAGCCTCCTTGATGAGGCGCTTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATACGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIRMSTL*WAVAKL
Trigger: CAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCG...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCAAGGTTCCTACCCAGTaGTTAGGAGCCTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: PSICCQIVAQAPISKPESKVPTQ*LGASSK
Trigger: CTTAGAGGAGGCTCCTAACAACTGGGTAGGAACCTT...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGCCCCCTTCTGCTTTaGAACCAGAACTGTATCCCC +
Preference number: 5 (lower is better)
Translates to: SSHPCTPKASLSLGSELLSPLLL*NQNCIP
Trigger: GGGGATACAGTTCTGGTTCAAAAGCAGAAGGGGGCT...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CTCAGGCTAGCGCTGGTCCCAGTCTGCACATCTCAGACCATACCCTCTTCCTATAAGTGGGTAGGTGTTTaGTCATGTACCCTTAACCGG +
Preference number: 5 (lower is better)
Translates to: LRLALVPVCTSQTIPSSYKWVGV*SCTLNR
Trigger: CCGGTTAAGGGTACATGACAAAACACCTACCCACTT...ATAGGAAGAGGGTATGGTCTGAGATGTGCAGACTGGGACCAGCGCTAGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTACTTCCGTTCCTCCTaGTGGATCCGCATGTGGTAC +
Preference number: 5 (lower is better)
Translates to: SSHPCTPKASLSLGSELLYFRSS*WIRMWY
Trigger: GTACCACATGCGGATCCACAAGGAGGAACGGAAGTA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CATCTGAGGCTGCCACGGCTGCTGAAGTCTCCTCATGCTGTTCCAGGTAGTGCTTTCAGTCCTGTATGCTaGGTCATGTGGTATTTCAGC +
Preference number: 5 (lower is better)
Translates to: HLRLPRLLKSPHAVPGSAFSPVC*VMWYFS
Trigger: GCTGAAATACCACATGACCAAGCATACAGGACTGAA...AGCACTACCTGGAACAGCATGAGGAGACTTCAGCAGCCGTGGCAGCCTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCATTCAGTCCTGTATGCTaGGTCATGTGGTATTTCAGC +
Preference number: 5 (lower is better)
Translates to: PKASLSLGSELLRLALVPFSPVC*VMWYFS
Trigger: GCTGAAATACCACATGACCAAGCATACAGGACTGAA...TGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCAGGCTAGCGCTGGTCCCAGTCCCTAATTGGGTAATGTaGGGCAAGTTCCTTAACCTC +
Preference number: 5 (lower is better)
Translates to: KASLSLGSELLRLALVPVPNWVM*GKFLNL
Trigger: GAGGTTAAGGAACTTGCCCAACATTACCCAATTAGG...GACTGGGACCAGCGCTAGCCTGAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGTGCAGACTGCAGGGCTaGAAATGGACATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: VDPLVKVQIFGVRLDTARCRLQG*KWTSVM
Trigger: CATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCA...CCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCCTGAGTCCCTTCTCTaGTCCCGGCAGGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTPESLL*SRQVRQ
Trigger: CTGCCTCACCTGCCGGGACAAGAGAAGGGACTCAGG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCGGAAGAGTTTGACGTaGGAGCCTATGAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSRKSLT*EPMKLQ
Trigger: CTGCAGCTTCATAGGCTCCAACGTCAAACTCTTCCG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTGAGCTCCTCTTTATCCACAGCCTTTaGGGAGTCCTTCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: SSHPCTPKASLSLGSELLFIHSL*GVLLGV
Trigger: GACACCCAGAAGGACTCCCAAAAGGCTGTGGATAAA...GAGGAGCTCAGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCGGAGGCGGGTATGCTaGCAGTTCTCATGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTRRRVC*QFSWLS
Trigger: GCTGAGCCATGAGAACTGCAAGCATACCCGCCTCCG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGCTGAGGCCGCGTTGTaGCTTGAAGCTAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKAEAAL*LEASPT
Trigger: TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGTGCTGAGGCCGCGTaGTTGCTTGAAGCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGAEAA*LLEASP
Trigger: GGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTAGTGCATCAGCCCGGTaGGTGCAGTACTCACACTCG +
Preference number: 5 (lower is better)
Translates to: VVLPLGDIATFSAHVILGSASAR*VQYSHS
Trigger: CGAGTGTGAGTACTGCACCAACCGGGCTGATGCACT...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGCCCACACCCTGGTTaGGGTCGGCTTGGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGCPHPG*GRLGQG
Trigger: ACCCTGACCAAGCCGACCCAAACCAGGGTGTGGGCA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTTGTGCAGCACAATACTaGGCAGTTAAGCCGTGTGTA +
Preference number: 5 (lower is better)
Translates to: HIHLLSKDGISLRPASIFCAAQY*AVKPCV
Trigger: TACACACGGCTTAACTGCCAAGTATTGTGCTGCACA...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCACTCTCTCTTCCTCTaGCCGGCTGCCGGGGTACTC +
Preference number: 5 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRHSLFL*PAAGVL
Trigger: GAGTACCCCGGCAGCCGGCAAGAGGAAGAGAGAGTG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000450765.5
CDS-3UTR CAA 90 bp CAAAGTGGACAGAAGTGGGTAGGTGTTTTGTCATGTACCCTTAACCGGTGCAAGTGCTGCCGGAAGAGTTaGACGTTGGAGCCTATGAAG +
Preference number: 5 (lower is better)
Translates to: QSGQKWVGVLSCTLNRCKCCRKS*TLEPMK
Trigger: CTTCATAGGCTCCAACGTCAAACTCTTCCGGCAGCA...CTTGCACCGGTTAAGGGTACATGACAAAACACCTACCCACTTCTGTCCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTGGACACATATGGGTCTaGAAGAGGGACTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: VVLPLGDIATFSAHVILGGHIWV*KRDSVP
Trigger: TGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCC...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGAGATGGGTCTTGAGCTaGCTCTTACTGGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVRWVLS*LLLVKN
Trigger: GTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCT...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGTGGGCAGTGGCAAAGTaGCACTCAGGACACTGGTGG +
Preference number: 5 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKWAVAK*HSGHWW
Trigger: CCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCA...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGTGGATCTTTTCATGAGCATGCATCTTGCCTACATGATCCTGGTAAGCCACTGCTAAGGATGGAGGATTaGTGGAGGGCTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: GGSFHEHASCLHDPGKPLLRMED*WRAQTL
Trigger: CAGTGTCTGAGCCCTCCACAAATCCTCCATCCTTAG...CAGTGGCTTACCAGGATCATGTAGGCAAGATGCATGCTCATGAAAAGATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp AAAGTTGCACTCAGGACACTGGTGGATCTTTTCATGAGCATGCATCTTGCCTACGCCTCTGCTTGTTCTTaGTCCTGTCTCCTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: KVALRTLVDLFMSMHLAYASACS*SCLLRA
Trigger: GGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGC...GTAGGCAAGATGCATGCTCATGAAAAGATCCACCAGTGTCCTGAGTGCAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAAGGCCGCGTTGTTGCTaGAAGCTAGCCCCACACTCG +
Preference number: 5 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGRPRCC*KLAPHS
Trigger: CGAGTGTGGGGCTAGCTTCAAGCAACAACGCGGCCT...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCATACTTCCGTTCCTCCTaGTGGATCCGCATGTGGTAC +
Preference number: 5 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAYFRSS*WIRMWY
Trigger: GTACCACATGCGGATCCACAAGGAGGAACGGAAGTA...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTTTCAGTCCTGTATGCTaGGTCATGTGGTATTTCAGC +
Preference number: 5 (lower is better)
Translates to: HIHLLSKDGISLRPASIFFSPVC*VMWYFS
Trigger: GCTGAAATACCACATGACCAAGCATACAGGACTGAA...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp AAAGTTGCACTCAGGACACTGGTGGATCTTTTCATGAGCATGCATCTTGCCTACTGCCTGCGTACGTGCTaGACCACCTGGAACTTTTGC +
Preference number: 5 (lower is better)
Translates to: KVALRTLVDLFMSMHLAYCLRTC*TTWNFC
Trigger: GCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCA...GTAGGCAAGATGCATGCTCATGAAAAGATCCACCAGTGTCCTGAGTGCAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGGGGTGGTGGGGTCTTaGCCCACACCCTGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNGVVGS*PTPWFG
Trigger: CCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp TCTCCATACCTCAGTCTGCTCACCTGCAAAATAGGGGTAACACTACCACCTGCCATTAGGGAAAGAGACTaGACCCCAGGACTGTACTAC +
Preference number: 5 (lower is better)
Translates to: SPYLSLLTCKIGVTLPPAIRERD*TPGLYY
Trigger: GTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAAT...GGCAGGTGGTAGTGTTACCCCTATTTTGCAGGTGAGCAGACTGAGGTATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CACATTCACCTGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTTCCATCTTTTCCTGCCCTTTTCCTTaGTGTACTCTATACTGGAGT +
Preference number: 5 (lower is better)
Translates to: HIHLLSKDGISLRPASIFSCPFP*CTLYWS
Trigger: ACTCCAGTATAGAGTACACAAAGGAAAAGGGCAGGA...AAAGATGGAAGCTGGGCGGAGGCTGATGCCATCTTTGGACAGCAGGTGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTAGTGATGGTAGGGTaGGGGAATGCTCAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: PSICCQIVAQAPISKPESLVMVG*GNAQEN
Trigger: ATTTTCTTGAGCATTCCCCAACCCTACCATCACTAG...GGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTGACAACAGATAGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTAGATGGGTCTTGAGCTaGCTCTTACTGGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSRWVLS*LLLVKN
Trigger: GTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCT...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCTGGCCATGTGGCGGTaGAGTGCATTCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRLAMWR*SAFLST
Trigger: GGTGGAGAGGAATGCACTCAACCGCCACATGGCCAG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGATGGGCAGTGGCAAAGTaGCACTCAGGACACTGGTGG +
Preference number: 5 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGWAVAK*HSGHWW
Trigger: CCACCAGTGTCCTGAGTGCAACTTTGCCACTGCCCA...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGAGGGCTGACAGCTGGTTaGAGGGCTCTGAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGGLTAG*RALNLV
Trigger: CACCAGATTCAGAGCCCTCAAACCAGCTGTCAGCCC...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACTGGAAATCCCGAAATGACTTTATTGGTCAGTACACCCTGCCTTGGACCTGCAGGTCTGGGCAAGCCCTaGTTCTTTCTGAGTAGAACA +
Preference number: 5 (lower is better)
Translates to: TGNPEMTLLVSTPCLGPAGLGKP*FFLSRT
Trigger: TGTTCTACTCAGAAAGAACAAGGGCTTGCCCAGACC...TGCAGGTCCAAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGGATTTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGGGGTGGTGGGGTCTTaGCCCACACCCTGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLGVVGS*PTPWFG
Trigger: CCCAAACCAGGGTGTGGGCAAAGACCCCACCACCCC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTGATGATGAGCTAAAGTaGCTTCTAGGAGGAGGCTTA +
Preference number: 5 (lower is better)
Translates to: DQRGVHCGSTGESADLWRDDELK*LLGGGL
Trigger: TAAGCCTCCTCCTAGAAGCAACTTTAGCTCATCATC...ACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATGGACCCCTCTTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CAGGAAGGTTCTAGTCACCCTTGTACCCCAAAAGCCAGTCTTTCCTTAGGCTCTCCCGAAATGACTTTATaGGTCAGTACACCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: QEGSSHPCTPKASLSLGSPEMTL*VSTPCL
Trigger: AAGGCAGGGTGTACTGACCAATAAAGTCATTTCGGG...AGAGCCTAAGGAAAGACTGGCTTTTGGGGTACAAGGGTGACTAGAACCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAGGGGTACTCTATGTTTaGTCTCTGTGGTTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIGVLYV*SLWFFP
Trigger: CGGGAAAAACCACAGAGACAAAACATAGAGTACCCC...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CCCTGGGAAGCTCCAAAGGAGCATCTTTTGGAAGCAGTAGCTCTGCTTCTTGTGCGGAATAGGTGCTTATaGGAACAAGCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: PWEAPKEHLLEAVALLLVRNRCL*EQAKSQ
Trigger: CTGTGATTTTGCTTGTTCCAATAAGCACCTATTCCG...CACAAGAAGCAGAGCTACTGCTTCCAAAAGATGCTCCTTTGGAGCTTCCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGCGGATGAGCACCCTCTaGTGGGCAGTGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRRMSTL*WAVAKL
Trigger: CAACTTTGCCACTGCCCACAAGAGGGTGCTCATCCG...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCTAAGGATGGAGGATTaGTGGAGGGCTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLRMED*WRAQTL
Trigger: CAGTGTCTGAGCCCTCCACAAATCCTCCATCCTTAG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp AAAGTTGCACTCAGGACACTGGTGGATCTTTTCATGAGCATGCATCTTGCCTACAAGGTTCCTACCCAGTaGTTAGGAGCCTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: KVALRTLVDLFMSMHLAYKVPTQ*LGASSK
Trigger: CTTAGAGGAGGCTCCTAACAACTGGGTAGGAACCTT...GTAGGCAAGATGCATGCTCATGAAAAGATCCACCAGTGTCCTGAGTGCAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TCCAGAAGGGGATTTTCTTCAGCACTCAAGTCAGAAGTCCCAATACCTTCAAAGGCAGGTGGAGTTGTCTaGAAGGTTCCTACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SRRGFSSALKSEVPIPSKAGGVV*KVPTQL
Trigger: CAACTGGGTAGGAACCTTCAAGACAACTCCACCTGC...CTTTGAAGGTATTGGGACTTCTGACTTGAGTGCTGAAGAAAATCCCCTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGCTGAGGCCGCGTTGTaGCTTGAAGCTAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNAEAAL*LEASPT
Trigger: TGTGGGGCTAGCTTCAAGCAACAACGCGGCCTCAGC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTATCCGCATGTGGTACTaGAGACGAGAGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTIRMWY*RREGSA
Trigger: TGCTGATCCCTCTCGTCTCAAGTACCACATGCGGAT...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp GGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACACAGCACGGCAGAAGAAACTGAGAACTaGCAGGTTAAAAACGCAATG +
Preference number: 5 (lower is better)
Translates to: GSTGESADLWRSSRHSTAEETEN*QVKNAM
Trigger: CATTGCGTTTTTAACCTGCAAGTTCTCAGTTTCTTC...TGCCGTGCTGTGTCTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGGGGAATCTTCAAGCTaGACCATACATGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRGESSS*TIHGLR
Trigger: CCGGAGGCCATGTATGGTCAAGCTTGAAGATTCCCC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp CAAAGGAGCACTACCACTTCTACGAGATATCATCTTTCTCTGAAACCAAGGCCATTTATCCACAGCCTTTaGGGAGTCCTTCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: QRSTTTSTRYHLSLKPRPFIHSL*GVLLGV
Trigger: GACACCCAGAAGGACTCCCAAAAGGCTGTGGATAAA...TGGCCTTGGTTTCAGAGAAAGATGATATCTCGTAGAAGTGGTAGTGCTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACGGACACATATGGGTCTaGAAGAGGGACTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYGHIWV*KRDSVP
Trigger: TGGCACCGAGTCCCTCTTCAAGACCCATATGTGTCC...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGCTGCCGTGTGGCTCTaGAGGTGCTCCTTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIAAVWL*RCSFRA
Trigger: GGCCCTAAAGGAGCACCTCAAGAGCCACACGGCAGC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATACTTCTGGCTCCTGGCTaGCATAGCGGAGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFILLAPG*HSGAAR
Trigger: CCTGGCAGCTCCGCTATGCAAGCCAGGAGCCAGAAG...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACGCCTCTGCTTGTTCTTaGTCCTGTCTCCTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYASACS*SCLLRA
Trigger: GGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGC...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCACCAATGCCTCTGCTaGTTCTTTGTCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTHQCLC*FFVLSP
Trigger: AGGAGACAGGACAAAGAACAAGCAGAGGCATTGGTG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGTGCTGAGGCCGCGTaGTTGCTTGAAGCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGAEAA*LLEASP
Trigger: GGGGCTAGCTTCAAGCAACAACGCGGCCTCAGCACC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp GTAGTGCTTCCACTTGGTGACATAGCCACATTCAGTGCACATGTAATCCTTGGTAAGTGGGTAGGTGTTTaGTCATGTACCCTTAACCGG +
Preference number: 5 (lower is better)
Translates to: VVLPLGDIATFSAHVILGKWVGV*SCTLNR
Trigger: CCGGTTAAGGGTACATGACAAAACACCTACCCACTT...ACCAAGGATTACATGTGCACTGAATGTGGCTATGTCACCAAGTGGAAGCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAAGGCCGCGTTGTTGCTaGAAGCTAGCCCCACACTCG +
Preference number: 5 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIRPRCC*KLAPHS
Trigger: CGAGTGTGGGGCTAGCTTCAAGCAACAACGCGGCCT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACTGCTGGTGCCTGAACTaGCCATGCTGCGTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNCWCLN*PCCVLW
Trigger: CCACAAAACGCAGCATGGCAAGTTCAGGCACCAGCA...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGACGTGCCCGCTGTTTaGTCCGTCTATCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRDVPAV*SVYLLS
Trigger: TGACAACAGATAGACGGACAAAACAGCGGGCACGTC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGGGTGGCCCTGCTTCTaGTGTTTACGGAATAGGTGC +
Preference number: 5 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLGWPCF*CLRNRC
Trigger: GCACCTATTCCGTAAACACAAGAAGCAGGGCCACCC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAAGCTCATACTTCCGCTaGCAGGCGAAGGCACACACC +
Preference number: 5 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFISSYFR*QAKAHT
Trigger: GGTGTGTGCCTTCGCCTGCAAGCGGAAGTATGAGCT...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACCTAAGGATGGAGGATTaGTGGAGGGCTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNLRMED*WRAQTL
Trigger: CAGTGTCTGAGCCCTCCACAAATCCTCCATCCTTAG...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGGAGCAGAGTCCCCATaGCTCAACGGGGACACATCA +
Preference number: 5 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIGAESP*LNGDTS
Trigger: TGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTCC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGGAGCAGAGTCCCCATaGCTCAACGGGGACACATCA +
Preference number: 5 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWGAESP*LNGDTS
Trigger: TGATGTGTCCCCGTTGAGCAATGGGGACTCTGCTCC...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAAAGCGCAGTTTCGAGTaGGTACCAAACGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLKRSFE*VPNVWG
Trigger: CCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTT...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TGTCCCTCTTTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGGACCACCTGGAACTTTaGCTTGGCCTTGTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: CPSFIWVIISKYYSQSPRDHLEL*LGLVVA
Trigger: TGCAACTACAAGGCCAAGCAAAAGTTCCAGGTGGTC...CCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAAAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATGCCTGCGTACGTGCTaGACCACCTGGAACTTTTGC +
Preference number: 5 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLCLRTC*TTWNFC
Trigger: GCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GAGCTAAAGTTGCTTCTAGGAGGAGGCTTAGTGGGTAGCAATCCTCCCTCTATAAAATCAAGCTTTGGATaGTGCATTCCTAGGCACAAA +
Preference number: 5 (lower is better)
Translates to: ELKLLLGGGLVGSNPPSIKSSFG*CIPRHK
Trigger: TTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTT...TATAGAGGGAGGATTGCTACCCACTAAGCCTCCTCCTAGAAGCAACTTTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATGCTGCCGGAAGAGTTaGACGTTGGAGCCTATGAAG +
Preference number: 5 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLCCRKS*TLEPMK
Trigger: CTTCATAGGCTCCAACGTCAAACTCTTCCGGCAGCA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000450765.5
CDS-3UTR CAA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTAGCAGGTGGAGTTGTCTaGAAGGTTCCTACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLAGGVV*KVPTQL
Trigger: CAACTGGGTAGGAACCTTCAAGACAACTCCACCTGC...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp GGAAATAAGTTCTCTAGTGATGGTAGGGTTGGGGAATGCTCAAGAAAATTGCTATGTCTCCTTAGGGCCTaGAGTAATGACTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: GNKFSSDGRVGECSRKLLCLLRA*SNDSDS
Trigger: TGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACA...TAGCAATTTTCTTGAGCATTCCCCAACCCTACCATCACTAGAGAACTTATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAGCCTCTGCTTGTTCTTaGTCCTGTCTCCTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIASACS*SCLLRA
Trigger: GGCCCTAAGGAGACAGGACAAAGAACAAGCAGAGGC...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAAAGCGCAGTTTCGAGTaGGTACCAAACGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIKRSFE*VPNVWG
Trigger: CCCCCAGACGTTTGGTACCAACTCGAAACTGCGCTT...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACGACCACCTGGAACTTTaGCTTGGCCTTGTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNDHLEL*LGLVVA
Trigger: TGCAACTACAAGGCCAAGCAAAAGTTCCAGGTGGTC...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATGCCTGCGTACGTGCTaGACCACCTGGAACTTTTGC +
Preference number: 5 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVICLRTC*TTWNFC
Trigger: GCAAAAGTTCCAGGTGGTCAAGCACGTACGCAGGCA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CCCTTTTCCTTTGTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGTGTTTTCATAAGCCTTaGGTATCTTTCCTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: PFSFVYSILEFPSSSCCRCFHKP*VSFLPF
Trigger: AAAGGGCAGGAAAGATACCAAAGGCTTATGAAAACA...CCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAAAGGAAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp GTAAGAAGGAAAGAGAAGATGGAGTGGGTAAAATCCAGATCTTATAGCCAGGGACGGAATAGGTGCTTATaGGAACAAGCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: VRRKEKMEWVKSRSYSQGRNRCL*EQAKSQ
Trigger: CTGTGATTTTGCTTGTTCCAATAAGCACCTATTCCG...TCCCTGGCTATAAGATCTGGATTTTACCCACTCCATCTTCTCTTTCCTTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATATACTTCCGTTCCTCCTaGTGGATCCGCATGTGGTAC +
Preference number: 5 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIYFRSS*WIRMWY
Trigger: GTACCACATGCGGATCCACAAGGAGGAACGGAAGTA...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CCAGATCTTATAGCCAGGGACTTTGATGGAGTGATGGTGAAGAAACTGAGAACTCTTTCCATAGTATCCTaGTGCTTTAACACCTTAGTG +
Preference number: 5 (lower is better)
Translates to: PDLIARDFDGVMVKKLRTLSIVS*CFNTLV
Trigger: CACTAAGGTGTTAAAGCACAAGGATACTATGGAAAG...AGTTCTCAGTTTCTTCACCATCACTCCATCAAAGTCCCTGGCTATAAGATCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp TTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACAACTCCCTGGTTATCTACTaGAAGTCTGTCTCATTCCGC +
Preference number: 5 (lower is better)
Translates to: FNMLYRALGTTAHAVRYNSLVIY*KSVSFR
Trigger: GCGGAATGAGACAGACTTCAAGTAGATAACCAGGGA...GTTGTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS-3UTR CAA 90 bp CAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGAAGGTTCCTACCCAGTaGTTAGGAGCCTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: QCTAIRNQRYSPCPSFIWKVPTQ*LGASSK
Trigger: CTTAGAGGAGGCTCCTAACAACTGGGTAGGAACCTT...CCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp TTTATATGGGTGATAATTTCAAAGTACTATAGCCAGAGTCCCAGGAAGGTTCTATGTCTCCTTAGGGCCTaGAGTAATGACTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: FIWVIISKYYSQSPRKVLCLLRA*SNDSDS
Trigger: TGAGTCAGAGTCATTACTCAAGGCCCTAAGGAGACA...TAGAACCTTCCTGGGACTCTGGCTATAGTACTTTGAAATTATCACCCATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000449707.5
ENST00000450765.5
CDS-3UTR CAA 90 bp ACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATATGGGTGATAAGATGGGTCTTGAGCTaGCTCTTACTGGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: TAIRNQRYSPCPSFIWVIRWVLS*LLLVKN
Trigger: GTTCTTCACCAGTAAGAGCAAGCTCAAGACCCATCT...TATCACCCATATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAAAGTGGGTAGGTGTTTaGTCATGTACCCTTAACCGG +
Preference number: 5 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIKWVGV*SCTLNR
Trigger: CCGGTTAAGGGTACATGACAAAACACCTACCCACTT...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp CTGTTTAACATGCTTTATAGAGCATTAGGCACAACAGCACATGCGGTTAGATACGAAGAAACTGAGAACTaGCAGGTTAAAAACGCAATG +
Preference number: 5 (lower is better)
Translates to: LFNMLYRALGTTAHAVRYEETEN*QVKNAM
Trigger: CATTGCGTTTTTAACCTGCAAGTTCTCAGTTTCTTC...GTATCTAACCGCATGTGCTGTTGTGCCTAATGCTCTATAAAGCATGTTAAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000449707.5
CDS-3UTR CAA 90 bp ACGCAATGTACAGCAATAAGAAATCAACGTTATAGTCCATGTCCCTCTTTTATAGGTGAAAATCAAGCTTaGGATTGTGCATTCCTAGGC +
Preference number: 5 (lower is better)
Translates to: TQCTAIRNQRYSPCPSFIGENQA*DCAFLG
Trigger: GCCTAGGAATGCACAATCCAAAGCTTGATTTTCACC...TATAAAAGAGGGACATGGACTATAACGTTGATTTCTTATTGCTGTACATTGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411696.7
CDS CCA 72 bp GCCGGCGGGAGCCGCATCTCTATGGTCGGCCGCGGCTaGAACGGCCCCCGGGGCCCGCTTTGTGCGACCGCC +
Preference number: 6 (lower is better)
Translates to: AGGSRISMVGRG*NGPRGPLCATA
Trigger: GGCGGTCGCACAAAGCGGGCCCCGGGGGCCGTTCCAGCCGCGGCCGACCATAGAGATGCGGCTCCCGCCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000440934.2
ENST00000449707.5
ENST00000450560.1
ENST00000450765.5
CDS GCA 72 bp GACGCGACTGCAGCGCCGGGGCCCAGCTCGTCTGGGTaGTCCCTTCAGTACCTCCTTCCGAGAGTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: DATAAPGPSSSG*SLQYLLPRVPS
Trigger: GCTGGGAACTCTCGGAAGGAGGTACTGAAGGGAGCACCCAGACGAGCTGGGCCCCGGCGCTGCAGTCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS CAA 90 bp GTTCCCAGCGCCCAGGCCCACCCTGATCCCGGGGCTCGAAAAACTTaGCCTCCAGCTCGCTCCACCCGCATTCCCTTCCCAGTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: VPSAQAHPDPGARKT*PPARSTRIPFPVPP
Trigger: GGGCGGAACTGGGAAGGGAATGCGGGTGGAGCGAGCTGGAGGCAAAGTTTTTCGAGCCCCGGGATCAGGGTGGGCCTGGGCGCTGGGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS CAA 90 bp GGCCCGCTTTGTGCGACCGCCTCCGGCTCAGCCGCCTCTAGGATATaGGGGATGTGGAAGCCACTCTCTCTTCCTCTTGCCGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: GPLCATASGSAASRI*GMWKPLSLPLAGCR
Trigger: CCGGCAGCCGGCAAGAGGAAGAGAGAGTGGCTTCCACATCCCCAATATCCTAGAGGCGGCTGAGCCGGAGGCGGTCGCACAAAGCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS GCA 72 bp CCCAGGCCCACCCTGATCCCGGGGCTCGAAAAACTTTaGCTCCAGCTCGCTCCACCCGCATTCCCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: PRPTLIPGLEKL*LQLAPPAFPSQ
Trigger: CTGGGAAGGGAATGCGGGTGGAGCGAGCTGGAGGCAAAGTTTTTCGAGCCCCGGGATCAGGGTGGGCCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS CAA 72 bp GCCCAGGCCCACCCTGATCCCGGGGCTCGAAAAACTTaGCCTCCAGCTCGCTCCACCCGCATTCCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: AQAHPDPGARKT*PPARSTRIPFP
Trigger: TGGGAAGGGAATGCGGGTGGAGCGAGCTGGAGGCAAAGTTTTTCGAGCCCCGGGATCAGGGTGGGCCTGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS CCA 72 bp GCCTCCGGCTCAGCCGCCTCTAGGATATTGGGGATGTaGAAGCCACTCTCTCTTCCTCTTGCCGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: ASGSAASRILGM*KPLSLPLAGCR
Trigger: CCGGCAGCCGGCAAGAGGAAGAGAGAGTGGCTTCCACATCCCCAATATCCTAGAGGCGGCTGAGCCGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS CCA 72 bp AGGCCCTGCACAGGCTGTATATGGGTCTCACTGCACTaGTGCAGGGCCAGCAGAGTGGGCTCTGCGAAGCTC +
Preference number: 6 (lower is better)
Translates to: RPCTGCIWVSLH*CRASRVGSAKL
Trigger: GAGCTTCGCAGAGCCCACTCTGCTGGCCCTGCACCAGTGCAGTGAGACCCATATACAGCCTGTGCAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS CCA 72 bp CTCTTCAGTTGCTGTGGCCTCTACCAGCAGGCAGCCTaGCTCAGTAGGTATAGGTGCAGGGTCCCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: LFSCCGLYQQAA*LSRYRCRVPGR
Trigger: CCTTCCCGGGACCCTGCACCTATACCTACTGAGCCAGGCTGCCTGCTGGTAGAGGCCACAGCAACTGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS TCA 72 bp GATTCTGGGCAGGAGAAGGTGTCAGGAGTGCCCCGGTaGATCTTGAAGTGGCTCTTCAGGGCCTGGGGTTGG +
Preference number: 6 (lower is better)
Translates to: DSGQEKVSGVPR*ILKWLFRAWGW
Trigger: CCAACCCCAGGCCCTGAAGAGCCACTTCAAGATTCACCGGGGCACTCCTGACACCTTCTCCTGCCCAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000440934.2
CDS TCA 72 bp GAAGGCTTGGGATGGAGCATCGTCATGATTTTGTCCTaGGAGCAGCAGGTACCCGGGCGGGGTCCAGAACCG +
Preference number: 6 (lower is better)
Translates to: EGLGWSIVMILS*EQQVPGRGPEP
Trigger: CGGTTCTGGACCCCGCCCGGGTACCTGCTGCTCTCAGGACAAAATCATGACGATGCTCCATCCCAAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440934.2
CDS CCA 72 bp ATACGCTTATCTTCCGGGCAGGAGGGCGCGTGGTCTTaGACAGACACAGTCGCTTCGCTTCTCTGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: IRLSSGQEGAWS*TDTVASLLWAS
Trigger: TGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCCGGAAGATAAGCGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS CCA 72 bp GCGTGGTCTTGGACAGACACAGTCGCTTCGCTTCTCTaGGCCTCAGCTTTCCTATCTCCAGACCCAGAGCCG +
Preference number: 6 (lower is better)
Translates to: AWSWTDTVASLL*ASAFLSPDPEP
Trigger: CGGCTCTGGGTCTGGAGATAGGAAAGCTGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449707.5
CDS CAA 72 bp AATACGCTTATCTTCCGGGCAGGAGGGCGCGTGGTCTaGGACAGACACAGTCGCTTCGCTTCTCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: NTLIFRAGGRVV*DRHSRFASLGL
Trigger: GAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCCGGAAGATAAGCGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS CAA 90 bp CAGAGAAGAAATACGCTTATCTTCCGGGCAGGAGGGCGCGTGGTCTaGGACAGACACAGTCGCTTCGCTTCTCTGGGCCTCAGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: QRRNTLIFRAGGRVV*DRHSRFASLGLSFP
Trigger: AGGAAAGCTGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCCGGAAGATAAGCGTATTTCTTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS TCA 72 bp GAAAGTTCTCCCTGTGTCCCAGCACCATGGCTCCGCTaGTGCTGCCGGAAGAGTTTGACGTTGGAGCCTATG +
Preference number: 6 (lower is better)
Translates to: ESSPCVPAPWLR*CCRKSLTLEPM
Trigger: CATAGGCTCCAACGTCAAACTCTTCCGGCAGCATCAGCGGAGCCATGGTGCTGGGACACAGGGAGAACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000440934.2
ENST00000450765.5
CDS CCA 72 bp GAAGAAATACGCTTATCTTCCGGGCAGGAGGGCGCGTaGTCTTGGACAGACACAGTCGCTTCGCTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: EEIRLSSGQEGA*SWTDTVASLLW
Trigger: CCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCCCTCCTGCCCGGAAGATAAGCGTATTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411696.7
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS TCA 72 bp CACCTGGGGTCAGGGTTCCAGCTACTGTCTCCACAATaGTCTCCATGTTCCCTGGTCCCTCTTCAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: HLGSGFQLLSPQ*SPCSLVPLQLL
Trigger: CAGCAACTGAAGAGGGACCAGGGAACATGGAGATCATTGTGGAGACAGTAGCTGGAACCCTGACCCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411696.7
ENST00000433921.5
ENST00000440934.2
ENST00000449707.5
ENST00000450765.5
CDS CCA 72 bp GAGCCGTCAAGATTAAGAACCTTCACCGCGTGGTCTTaGACAGACACAGTCGCTTCGCTTCTCTGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: EPSRLRTFTAWS*TDTVASLLWAS
Trigger: TGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGGTGAAGGTTCTTAATCTTGACGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433921.5
CDS CCA 72 bp GACGCTGAGCCGTCAAGATTAAGAACCTTCACCGCGTaGTCTTGGACAGACACAGTCGCTTCGCTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: DAEPSRLRTFTA*SWTDTVASLLW
Trigger: CCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGGTGAAGGTTCTTAATCTTGACGGCTCAGCGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433921.5
CDS GCA 72 bp GGGATGTGGAAGCCACTCTCTCTTCCTCTTGCCGGCTaGCGGGGTACTCTATGTTTTGTCTCTGTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: GMWKPLSLPLAG*RGTLCFVSVVF
Trigger: AAAAACCACAGAGACAAAACATAGAGTACCCCGGCAGCCGGCAAGAGGAAGAGAGAGTGGCTTCCACATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411696.7
ENST00000450765.5
CDS CCA 72 bp CCACCGACTTGTGTGTTTTGGCTTCTTAAATGCGCGTaGTCTTGGACAGACACAGTCGCTTCGCTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: PPTCVFWLLKCA*SWTDTVASLLW
Trigger: CCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCATTTAAGAAGCCAAAACACACAAGTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450560.1
CDS CCA 72 bp ACTTGTGTGTTTTGGCTTCTTAAATGCGCGTGGTCTTaGACAGACACAGTCGCTTCGCTTCTCTGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: TCVFWLLKCAWS*TDTVASLLWAS
Trigger: TGAGGCCCAGAGAAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCATTTAAGAAGCCAAAACACACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450560.1
CDS GCA 72 bp TCATCACCACCGACTTGTGTGTTTTGGCTTCTTAAATaGGCGTGGTCTTGGACAGACACAGTCGCTTCGCTT +
Preference number: 6 (lower is better)
Translates to: SSPPTCVFWLLK*AWSWTDTVASL
Trigger: AAGCGAAGCGACTGTGTCTGTCCAAGACCACGCGCATTTAAGAAGCCAAAACACACAAGTCGGTGGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450560.1
CDS CCA 72 bp AAAGGGGGTCTGTCATCACCACCGACTTGTGTGTTTTaGCTTCTTAAATGCGCGTGGTCTTGGACAGACACA +
Preference number: 6 (lower is better)
Translates to: KGGLSSPPTCVF*LLKCAWSWTDT
Trigger: TGTGTCTGTCCAAGACCACGCGCATTTAAGAAGCCAAAACACACAAGTCGGTGGTGATGACAGACCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450560.1