RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF135 (Homo sapiens)

Ensembl gene IDs: ENSG00000176293

Ensembl transcript IDs: ENST00000313434.10, ENST00000401053.8, ENST00000515535.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTCCGGCAGCTaGGGCTCGGCTGGGTCCTCCTCTCCCTGGCCCTGGGCGGGGCGC +
Preference number: 1 (lower is better)
Translates to: PRGSRARSPVRCSGS*GSAGSSSPWPWAGR
Trigger: GCGCCCCGCCCAGGGCCAGGGAGAGGAGGACCCAGCCGAGCCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp GAAGGCCCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGACTCTaGCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCC +
Preference number: 1 (lower is better)
Translates to: EGPGPAGPPGRGVRL*HRIAEAVRHPAACP
Trigger: GGGGCAGGCTGCTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTGGGGGTCCTGCGGGTCCGGGGCCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp CCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTaGGCTGTTCCGGCAGCTGAGGCTCGGCTGGGTCCTCCTCTCCCT +
Preference number: 1 (lower is better)
Translates to: PNSREPRGDPEPGAL*AVPAAEARLGPPLP
Trigger: AGGGAGAGGAGGACCCAGCCGAGCCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 90 bp GAGCCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTaGATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGC +
Preference number: 1 (lower is better)
Translates to: EPLCCPVPEGPLCRP*IPDEALGLSTPLGG
Trigger: GCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp TCCTGTCGGTGGCCTCCGTTGTTGGAGGCCTCCAGGTCCCACATCTaGAGCAGCAGGCGCGGGGCATGCGCTGCAGGGCTGCCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: SCRWPPLLEASRSHI*SSRRGACAAGLPGR
Trigger: CCTCCCAGGCAGCCCTGCAGCGCATGCCCCGCGCCTGCTGCTGCAGATGTGGGACCTGGAGGCCTCCAACAACGGAGGCCACCGACAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp CGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTaGCCCGGACAGGGGCACGGCGAAACTGGGAACCAAGAGGCCGCA +
Preference number: 1 (lower is better)
Translates to: RLCHRIAEAVRHPAA*PGQGHGETGNQEAA
Trigger: TGCGGCCTCTTGGTTCCCAGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp CACCACAGCAGCCATGGCGGCCGGAAGCGCTACGCCTGTCAGGGCTaGTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAG +
Preference number: 1 (lower is better)
Translates to: HHSSHGGRKRYACQG*WKTFHFSLALAEHQ
Trigger: CTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCAGCAGCCCTGACAGGCGTAGCGCTTCCGGCCGCCATGGCTGCTGTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp ACCCCACTCTCTTCGCTGGCAGCCGGGCCCCTCCCTCCAGGAGGGTaGGCTCTGAGCAGGCTCTCCTTGCATCGTGCATCTTGTGGCCAA +
Preference number: 1 (lower is better)
Translates to: TPLSSLAAGPLPPGG*ALSRLSLHRASCGQ
Trigger: TTGGCCACAAGATGCACGATGCAAGGAGAGCCTGCTCAGAGCGCACCCTCCTGGAGGGAGGGGCCCGGCTGCCAGCGAAGAGAGTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp GCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTaGGTGGCGGCTTCCTGTGGTGTTTGTGGACGTCCTCTGCCTGTG +
Preference number: 1 (lower is better)
Translates to: AGRESQTRHWAFPRP*VAASCGVCGRPLPV
Trigger: CACAGGCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTaGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGT +
Preference number: 1 (lower is better)
Translates to: FRRGRFAGRESQTRH*AFPRPWVAASCGVC
Trigger: ACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp CACAGCAGCCATGGCGGCCGGAAGCGCTACGCCTGTCAGGGCTGCTaGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAG +
Preference number: 1 (lower is better)
Translates to: HSSHGGRKRYACQGC*KTFHFSLALAEHQK
Trigger: CTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCAGCAGCCCTGACAGGCGTAGCGCTTCCGGCCGCCATGGCTGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 90 bp TCTCTTCGCTGGCAGCCGGGCCCCTCCCTCCAGGAGGGTGCGCTCTaGGCAGGCTCTCCTTGCATCGTGCATCTTGTGGCCAAGCTAGTG +
Preference number: 1 (lower is better)
Translates to: SLRWQPGPSLQEGAL*AGSPCIVHLVAKLV
Trigger: CACTAGCTTGGCCACAAGATGCACGATGCAAGGAGAGCCTGCTCAGAGCGCACCCTCCTGGAGGGAGGGGCCCGGCTGCCAGCGAAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp CACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTGGACGTCCTCTaGCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGA +
Preference number: 1 (lower is better)
Translates to: HAPGWRLPVVFVDVL*LCPESAPEAKRSQR
Trigger: TCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp ACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTaGAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCAT +
Preference number: 1 (lower is better)
Translates to: THPGPALASEGSRRM*KKTRLSCSHLVPPH
Trigger: ATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp GACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTaGTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTG +
Preference number: 1 (lower is better)
Translates to: DEALGLSTPLGGGFL*CLWTSSACALNPLL
Trigger: CAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTaGCGGCTTCCTGTGGTGTTTGTGGACGTCCTCTGCCTGTGCCCT +
Preference number: 1 (lower is better)
Translates to: AVNPRRGIGPFHAPG*RLPVVFVDVLCLCP
Trigger: AGGGCACAGGCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp TTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTaGCCTCCGTTGTTGGAGGCCTCCAGGTCCCACATCTGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: FQNPGSVGLSFLSCR*PPLLEASRSHICSS
Trigger: GCTGCTGCAGATGTGGGACCTGGAGGCCTCCAACAACGGAGGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp CAGGTGGAGACCTCCAAAGGCGCGGTTTCCAGAACCCGGGCTCAGTaGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTCCGTTGTTGGAGG +
Preference number: 1 (lower is better)
Translates to: QVETSKGAVSRTRAQ*GCPSCPVGGLRCWR
Trigger: CCTCCAACAACGGAGGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCGCGCCTTTGGAGGTCTCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp CCTGGGTGGCGGCTTCCTGTGGTGTTTGTGGACGTCCTCTGCCTGTaGCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGG +
Preference number: 1 (lower is better)
Translates to: PGWRLPVVFVDVLCL*PESAPEAKRSQREG
Trigger: CCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTaGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAA +
Preference number: 1 (lower is better)
Translates to: NEKGPREALTSVNTP*ASARIRGEPPDVEE
Trigger: TTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp TTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTaGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGC +
Preference number: 1 (lower is better)
Translates to: LGLSTPLGGGFLWCL*TSSACALNPLLRLS
Trigger: GCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp GGCTCTCCTTGCATCGTGCATCTTGTGGCCAAGCTAGTGGCCAGGTaGAGACCTCCAAAGGCGCGGTTTCCAGAACCCGGGCTCAGTGGG +
Preference number: 1 (lower is better)
Translates to: GSPCIVHLVAKLVAR*RPPKARFPEPGLSG
Trigger: CCCACTGAGCCCGGGTTCTGGAAACCGCGCCTTTGGAGGTCTCCACCTGGCCACTAGCTTGGCCACAAGATGCACGATGCAAGGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp CCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGGAACTCCGGTTaGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTG +
Preference number: 1 (lower is better)
Translates to: PSLTLPPGWTLRNSG*WKEIHKEAASQVRL
Trigger: CAACCTCACCTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGAGGCAGCGTCAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp AGCCTGACGCTGCCTCCAGGCTGGACACTGAGGAACTCCGGTTGGTaGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGT +
Preference number: 1 (lower is better)
Translates to: SLTLPPGWTLRNSGW*KEIHKEAASQVRLG
Trigger: ACCCAACCTCACCTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGAGGCAGCGTCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp AATCTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTaGACGGTGTCCACATTCCTCCTGTCAGTGATGTTCTCTTTGCTC +
Preference number: 1 (lower is better)
Translates to: NLWPACVRLPPSHPG*TVSTFLLSVMFSLL
Trigger: GAGCAAAGAGAACATCACTGACAGGAGGAATGTGGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp GCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTaGAGCCATTTAGTGCCGCCCCATGCTAGGTTATTTGACATTGTG +
Preference number: 1 (lower is better)
Translates to: ASEGSRRMWKKTRLS*SHLVPPHARLFDIV
Trigger: CACAATGTCAAATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 90 bp CTGAGTGAGGCAGGAATCCAGTTACGTCCATGGTCTCTTGCTGCATaGCAGACCACCCCAAGACTTGGTCGGTGGAAACGGCAGTGGTGT +
Preference number: 1 (lower is better)
Translates to: LSEAGIQLRPWSLAA*QTTPRLGRWKRQWC
Trigger: ACACCACTGCCGTTTCCACCGACCAAGTCTTGGGGTGGTCTGTCATGCAGCAAGAGACCATGGACGTAACTGGATTCCTGCCTCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 90 bp ACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTaGGGTTGGGTTGAATTGGTGTTAGGGCCGGGTGGGGTTTGCTTT +
Preference number: 1 (lower is better)
Translates to: TPVGGKRSTRKQPPR*GWVELVLGPGGVCF
Trigger: AAAGCAAACCCCACCCGGCCCTAACACCAATTCAACCCAACCTCACCTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp TGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTaGCCCGATTCCTCCTGTTTGCGCTCCCCAGGGTTGCTCAAGTGG +
Preference number: 1 (lower is better)
Translates to: CLKVRDLPVLSSSHP*PDSSCLRSPGLLKW
Trigger: CCACTTGAGCAACCCTGGGGAGCGCAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 90 bp TGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTaGATTGGTGTTAGGGCCGGGTGGGGTTTGCTTTTTCTTCAGAGG +
Preference number: 1 (lower is better)
Translates to: WKEIHKEAASQVRLG*IGVRAGWGLLFLQR
Trigger: CCTCTGAAGAAAAAGCAAACCCCACCCGGCCCTAACACCAATTCAACCCAACCTCACCTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 90 bp AAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTaGGTGAGGCAGGAATCCAGTTACGTCCATGGTCTCTTGCTGCAT +
Preference number: 1 (lower is better)
Translates to: KTSALTASPFSHHRV*VRQESSYVHGLLLH
Trigger: ATGCAGCAAGAGACCATGGACGTAACTGGATTCCTGCCTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp GACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTaGTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGCT +
Preference number: 1 (lower is better)
Translates to: DIVQCRVALKCVICQ*FLQVTLAPIPPVCA
Trigger: AGCGCAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp ACATTCCTCCTGTCAGTGATGTTCTCTTTGCTCACCTGGTTAGAGTaGAGTTTTTCCACTGTATGGCTAACTGGGCCAGATGCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: TFLLSVMFSLLTWLE*SFSTVWLTGPDAEA
Trigger: AGCCTCTGCATCTGGCCCAGTTAGCCATACAGTGGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAACATCACTGACAGGAGGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 90 bp ACGGTGTCCACATTCCTCCTGTCAGTGATGTTCTCTTTGCTCACCTaGTTAGAGTGCAGTTTTTCCACTGTATGGCTAACTGGGCCAGAT +
Preference number: 1 (lower is better)
Translates to: TVSTFLLSVMFSLLT*LECSFSTVWLTGPD
Trigger: ATCTGGCCCAGTTAGCCATACAGTGGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAACATCACTGACAGGAGGAATGTGGACACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp TTATTTGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTaGCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTT +
Preference number: 1 (lower is better)
Translates to: LFDIVQCRVALKCVI*QCFLQVTLAPIPPV
Trigger: AACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 90 bp CATGCTAGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTTAAAGTaGGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATT +
Preference number: 1 (lower is better)
Translates to: HARLFDIVQCRVALK*VICQCFLQVTLAPI
Trigger: AATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCAAATAACCTAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp AGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTCCGGCAGCTGAGGGCCGCACCCCGAGGATaGGGACGGGCAGAGCCTCGA +
Preference number: 2 (lower is better)
Translates to: SPAGIQSPEPCALFRQLRAAPRG*GRAEPR
Trigger: TCGAGGCTCTGCCCGTCCCCATCCTCGGGGTGCGGC...CCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp GCTCACGCTAGGGCTCTGACCTTGTTCCAGAAGGCGGGAGGCGGCAGGAGAGCGCGCGGGGGTGCTGCCTaGGCTGCCTACGGAGGCGCC +
Preference number: 2 (lower is better)
Translates to: AHARALTLFQKAGGGRRARGGAA*AAYGGA
Trigger: GGCGCCTCCGTAGGCAGCTCAGGCAGCACCCCCGCG...CGCTCTCCTGCCGCCTCCCGCCTTCTGGAACAAGGTCAGAGCCCTAGCGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp GGGACGCCCTTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAGAGCAGCTATGCCTGCGGCGAGTaGGGGGAGGCCTTCGCGTGG +
Preference number: 2 (lower is better)
Translates to: GTPLPIPRRAPLRRRKSSYACGE*GEAFAW
Trigger: CCACGCGAAGGCCTCCCCGCACTCGCCGCAGGCATA...GCTGCTCTTCCTCCTCCTCAGTGGTGCCCGACGGGGGATCGGCAAGGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp AGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTCCGGCAGCTGAGGTTCCACGCCCCTGGGTaGCGGCTTCCTGTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: SPAGIQSPEPCALFRQLRFHAPG*RLPVVF
Trigger: AAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAA...CCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCGCTTCCAAACAGCCGTaGGCCCCGCGGGGATCCAGA +
Preference number: 2 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVAASKQP*APRGSR
Trigger: TCTGGATCCCCGCGGGGCTCACGGCTGTTTGGAAGC...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp GGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAACAAGCAGGCGCGGGGCATaGGCTGCAGGGCTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GVAVLPHWRLCASTPTRTSRRGA*AAGLPG
Trigger: CCCAGGCAGCCCTGCAGCGCATGCCCCGCGCCTGCT...TGTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp GGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCGCAGGGCCCTGGGGCTaGCGAGCCGGGCTTGTCCCG +
Preference number: 2 (lower is better)
Translates to: GWTLRNSGWWKEIHKEAAAGPWG*RAGLVP
Trigger: CGGGACAAGCCCGGCTCGTCAGCCCCAGGGCCCTGC...GGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp CCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACCGATTCCTCCTGTTTaGGCTCCCCAGGGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: PPDRRGSPSSSSLPRTGAPIPPV*APQGCS
Trigger: TGAGCAACCCTGGGGAGCGCAAACAGGAGGAATCGG...TGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGCGATCCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp CCCCTCCCAGCGCCATCAGCCCCAGCAAAGACCTCAGCATTGACTGCTTCACCACCGCTTTGCCGGCCGTaGATCCCAGACGAGGCATTG +
Preference number: 2 (lower is better)
Translates to: PLPAPSAPAKTSALTASPPLCRP*IPDEAL
Trigger: CAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGG...TGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGGGCTGATGGCGCTGGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp GGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCCCAGAGGCGCAGAGGTaGGCCGCTGTGCTGTCCCGT +
Preference number: 2 (lower is better)
Translates to: GWTLRNSGWWKEIHKEAAPEAQR*AAVLSR
Trigger: ACGGGACAGCACAGCGGCTCACCTCTGCGCCTCTGG...GGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp CTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCTGCGCTCCCCAGGGTTaGTCAAGTGGAAATTTTGTC +
Preference number: 2 (lower is better)
Translates to: LQGCLGGTALLPNSREPRCAPQG*SSGNFV
Trigger: GACAAAATTTCCACTTGAGCAACCCTGGGGAGCGCA...GCGGGGCTCACGGCTGTTTGGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTTTGTGGACGTCCTCTaGCTGTGCCCTGAATCCGCT +
Preference number: 2 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVAFVDVL*LCPESA
Trigger: AGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAA...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp GGGACGCCCTTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAGAGCAGCTGCGTGATCTGCCAGTaGTTTCTTCAAGTCACCCTT +
Preference number: 2 (lower is better)
Translates to: GTPLPIPRRAPLRRRKSSCVICQ*FLQVTL
Trigger: AAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCA...GCTGCTCTTCCTCCTCCTCAGTGGTGCCCGACGGGGGATCGGCAAGGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp AAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGAGTGAGGGGTCCTCCTCTCCCTaGCCCTGGGCGGGGCGCTCA +
Preference number: 2 (lower is better)
Translates to: KDLSIDCFTILPPPCLSEGSSSP*PWAGRS
Trigger: TGAGCGCCCCGCCCAGGGCCAGGGAGAGGAGGACCC...CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp CCCCTCCCAGCGCCATCAGCCCCAGCAAAGACCTCAGCATTGACTGCTTCACCAAGAACCCGGGCTCAGTaGGGCTGTCCTTCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: PLPAPSAPAKTSALTASPRTRAQ*GCPSCP
Trigger: AGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCT...TGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGGGCTGATGGCGCTGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CAA 90 bp TCCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGGAACTCCGGTaGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTT +
Preference number: 2 (lower is better)
Translates to: SQPDAASRLDTEELR*VERDPQGSSLPGEV
Trigger: AACCTCACCTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGAGGCAGCGTCAGGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp CCCCTCCCAGCGCCATCAGCCCCAGCAAAGACCTCAGCATTGACTGCTTCACCATCCCACCACCGTGTCTaGGTGAGGCAGGAATCCAGT +
Preference number: 2 (lower is better)
Translates to: PLPAPSAPAKTSALTASPSHHRV*VRQESS
Trigger: ACTGGATTCCTGCCTCACTCAGACACGGTGGTGGGA...TGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGGGCTGATGGCGCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp CTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCCTCACCTGGTTAGAGTaGAGTTTTTCCACTGTATGG +
Preference number: 2 (lower is better)
Translates to: LQGCLGGTALLPNSREPRLTWLE*SFSTVW
Trigger: CCATACAGTGGAAAAACTGCACTCTAACCAGGTGAG...GCGGGGCTCACGGCTGTTTGGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp CCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCCACTGTATGGCTAACTaGGCCAGATGCAGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: PALASEGSRRMWKKTRLSHCMAN*ARCRGL
Trigger: TAAGCCTCTGCATCTGGCCCAGTTAGCCATACAGTG...GGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp GGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAACAGCCTGTCAGGGCTGCTaGAAGACCTTCCACTTCAGC +
Preference number: 2 (lower is better)
Translates to: GVAVLPHWRLCASTPTRTACQGC*KTFHFS
Trigger: GCTGAAGTGGAAGGTCTTCCAGCAGCCCTGACAGGC...TGTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp CCCGGGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGTTCACTTCTAATCTGTaGCCTGCATGTGTGCGCCTT +
Preference number: 2 (lower is better)
Translates to: PGGGRSAPLEALCQHTNKFTSNL*PACVRL
Trigger: AAGGCGCACACATGCAGGCCACAGATTAGAAGTGAA...CTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp AAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGAGTGAGGCACCACAGCAGCCATaGCGGCCGGAAGCGCTACGC +
Preference number: 2 (lower is better)
Translates to: KDLSIDCFTILPPPCLSEAPQQP*RPEALR
Trigger: GCGTAGCGCTTCCGGCCGCCATGGCTGCTGTGGTGC...CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCAGAGTTGCCTTAAAGTaGGTGATCTGCCAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVARVALK*VICQCF
Trigger: AAAGCACTGGCAGATCACGCACTTTAAGGCAACTCT...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp CCCGGGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAGTTTTTCCACTGTATaGCTAACTGGGCCAGATGCA +
Preference number: 2 (lower is better)
Translates to: PGGGRSAPLEALCQHTNKSFSTV*LTGPDA
Trigger: TGCATCTGGCCCAGTTAGCCATACAGTGGAAAAACT...CTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGTTCCTGTGGTGTTTGTaGACGTCCTCTGCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLFLWCL*TSSACA
Trigger: GGCACAGGCAGAGGACGTCCACAAACACCACAGGAA...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR GCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGCCATTGGAGGCTCTGTaGCAGCACACCAACAAGAAC +
Preference number: 2 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLPLEAL*QHTNKN
Trigger: GTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATGG...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CCA 90 bp GGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAACATTCTCTTTGCTCACCTaGTTAGAGTGCAGTTTTTCC +
Preference number: 2 (lower is better)
Translates to: GVAVLPHWRLCASTPTRTFSLLT*LECSFS
Trigger: GGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAA...TGTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGCATTCCTCCTGTCAGTaGTGTTCTCTTTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLHSSCQ*CSLCSP
Trigger: AGGTGAGCAAAGAGAACATCACTGACAGGAGGAATG...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp ATAAGTCACCGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATCTCAGAATCAGTaGGACTCTACGGAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: ISHRAWPANAISNEGSKSPSQNQ*DSTEAA
Trigger: AGCTGCTTCCGTAGAGTCTCACTGATTCTGAGATGG...TGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
3UTR CAA 90 bp CCAGGGTGCACGGTGTCCACATTCCTCCTGTCAGTGATGTTCTCTTaGCTCACCTGGTTAGAGTGCAGTTTTTCCACTGTATGGCTAACT +
Preference number: 2 (lower is better)
Translates to: PGCTVSTFLLSVMFS*LTWLECSFSTVWLT
Trigger: AGTTAGCCATACAGTGGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAACATCACTGACAGGAGGAATGTGGACACCGTGCACCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR TCA 90 bp CGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGAAGGTCCTGAGTGTTaGTTATCTCCACGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: RAWPANAISNEGSKSPFKEGPEC*LSPRFP
Trigger: AGGGAAACGTGGAGATAATCAACACTCAGGACCTTC...TTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
3UTR-3UTR TCA 90 bp CAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTGAAGGTCCTGAGTGTTaGTTATCTCCACGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: QPMQFLMRAASHHLKVIVEGPEC*LSPRFP
Trigger: AGGGAAACGTGGAGATAATCAACACTCAGGACCTTC...AACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
3UTR-3UTR TCA 90 bp TTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTGTCAGAAAGACTCCATCTCAGAATCAGTaGGACTCTACGGAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: FLMRAASHHLKVIVVRKTPSQNQ*DSTEAA
Trigger: AGCTGCTTCCGTAGAGTCTCACTGATTCTGAGATGG...AGTCTTTCTGACAACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
3UTR GCA 72 bp CGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTaGGCTGTTCCGGCAGCTGAGGCTCGGCTGGGTCCT +
Preference number: 3 (lower is better)
Translates to: REPRGDPEPGAL*AVPAAEARLGP
Trigger: AGGACCCAGCCGAGCCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp TCCAGAGCCCGGAGCCCTGTGCGCTGTTCCGGCAGCTaGGGCTCGGCTGGGTCCTCCTCTCCCTGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: SRARSPVRCSGS*GSAGSSSPWPW
Trigger: CCAGGGCCAGGGAGAGGAGGACCCAGCCGAGCCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp GGACCCGCAGGACCCCCAGGACGCGGAGTCCGACTCTaGCACCGGATCGCAGAGGCAGTCCGTCATCCAGCA +
Preference number: 3 (lower is better)
Translates to: GPAGPPGRGVRL*HRIAEAVRHPA
Trigger: TGCTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTGGGGGTCCTGCGGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTaGATCCCAGACGAGGCATTGGGCCTTTCCACGCCC +
Preference number: 3 (lower is better)
Translates to: CCPVPEGPLCRP*IPDEALGLSTP
Trigger: GGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp TGGCAGCCGGGCCCCTCCCTCCAGGAGGGTGCGCTCTaGGCAGGCTCTCCTTGCATCGTGCATCTTGTGGCC +
Preference number: 3 (lower is better)
Translates to: WQPGPSLQEGAL*AGSPCIVHLVA
Trigger: GGCCACAAGATGCACGATGCAAGGAGAGCCTGCTCAGAGCGCACCCTCCTGGAGGGAGGGGCCCGGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp GGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTaGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGAT +
Preference number: 3 (lower is better)
Translates to: GPREALTSVNTP*ASARIRGEPPD
Trigger: ATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp GGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTaGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGT +
Preference number: 3 (lower is better)
Translates to: GRFAGRESQTRH*AFPRPWVAASC
Trigger: ACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp GTGGCTCTCGCACCTGATGGAGCACCACAGCAGCCATaGCGGCCGGAAGCGCTACGCCTGTCAGGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VALAPDGAPQQP*RPEALRLSGLL
Trigger: CAGCAGCCCTGACAGGCGTAGCGCTTCCGGCCGCCATGGCTGCTGTGGTGCTCCATCAGGTGCGAGAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp AGCCATGGCGGCCGGAAGCGCTACGCCTGTCAGGGCTaGTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCC +
Preference number: 3 (lower is better)
Translates to: SHGGRKRYACQG*WKTFHFSLALA
Trigger: GGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCAGCAGCCCTGACAGGCGTAGCGCTTCCGGCCGCCATGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp CACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTaGCCCGGACAGGGGCACGGCGAAACTGGGAACCAA +
Preference number: 3 (lower is better)
Translates to: HRIAEAVRHPAA*PGQGHGETGNQ
Trigger: TTGGTTCCCAGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGCGATCCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp CATGGCGGCCGGAAGCGCTACGCCTGTCAGGGCTGCTaGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAG +
Preference number: 3 (lower is better)
Translates to: HGGRKRYACQGC*KTFHFSLALAE
Trigger: CTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCAGCAGCCCTGACAGGCGTAGCGCTTCCGGCCGCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp TCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTaGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTG +
Preference number: 3 (lower is better)
Translates to: STPLGGGFLWCL*TSSACALNPLL
Trigger: CAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp CCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTaGCGGCTTCCTGTGGTGTTTGTGGACGTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: PRRGIGPFHAPG*RLPVVFVDVLC
Trigger: GCAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp ACCTCCAAAGGCGCGGTTTCCAGAACCCGGGCTCAGTaGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTCCGT +
Preference number: 3 (lower is better)
Translates to: TSKGAVSRTRAQ*GCPSCPVGGLR
Trigger: ACGGAGGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCGCGCCTTTGGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp GGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTaGAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTG +
Preference number: 3 (lower is better)
Translates to: GPALASEGSRRM*KKTRLSCSHLV
Trigger: CACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CAA 90 bp GGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAACACCCGATTCCTCCTGTTaGCGCTCCCCAGGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: GVAVLPHWRLCASTPTRTPDSSC*RSPGLL
Trigger: GAGCAACCCTGGGGAGCGCAAACAGGAGGAATCGGG...TGTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp GGATCTGTGTATGACTGGTCCCGGGGGTGGCCGTTCTaGCCCATTGGAGGCTCTGTGCCAGCACACCAACAA +
Preference number: 3 (lower is better)
Translates to: GSVYDWSRGWPF*PIGGSVPAHQQ
Trigger: TTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCCCGGGACCAGTCATACACAGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp GAAACGGCAGTGGTGTTAGTTGCCAGGATCTGTGTATaGCTGGTCCCGGGGGTGGCCGTTCTGCCCCATTGG +
Preference number: 3 (lower is better)
Translates to: ETAVVLVARICV*LVPGVAVLPHW
Trigger: CCAATGGGGCAGAACGGCCACCCCCGGGACCAGTCATACACAGATCCTGGCAACTAACACCACTGCCGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp CCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTaGACGGTGTCCACATTCCTCCTGTCAGTGATGTTC +
Preference number: 3 (lower is better)
Translates to: PACVRLPPSHPG*TVSTFLLSVMF
Trigger: GAACATCACTGACAGGAGGAATGTGGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp CTGCCTCCAGGCTGGACACTGAGGAACTCCGGTTGGTaGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: LPPGWTLRNSGW*KEIHKEAASQV
Trigger: CACCTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp ACGCTGCCTCCAGGCTGGACACTGAGGAACTCCGGTTaGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: TLPPGWTLRNSG*WKEIHKEAASQ
Trigger: CTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGAGGCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp TCCCAGCGCCATCAGCCCCAGCAAAGACCTCAGCATTaGCTGCTTCACCATTCTCCCACCACCGTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: SQRHQPQQRPQH*LLHHSPTTVSE
Trigger: CTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGGGCTGATGGCGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp GGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTaGGGTTGGGTTGAATTGGTGTTAGGGCCGGGTGGG +
Preference number: 3 (lower is better)
Translates to: GGKRSTRKQPPR*GWVELVLGPGG
Trigger: CCCACCCGGCCCTAACACCAATTCAACCCAACCTCACCTGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp CAAGACTTGGTCGGTGGAAACGGCAGTGGTGTTAGTTaGCAGGATCTGTGTATGACTGGTCCCGGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: QDLVGGNGSGVS*QDLCMTGPGGG
Trigger: GCCACCCCCGGGACCAGTCATACACAGATCCTGGCAACTAACACCACTGCCGTTTCCACCGACCAAGTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp GGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTaGAGCCATTTAGTGCCGCCCCATGCTAGGTTATTT +
Preference number: 3 (lower is better)
Translates to: GSRRMWKKTRLS*SHLVPPHARLF
Trigger: AAATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp AGCGCCATCAGCCCCAGCAAAGACCTCAGCATTGACTaGTTCACCATTCTCCCACCACCGTGTCTGAGTGAG +
Preference number: 3 (lower is better)
Translates to: SAISPSKDLSID*FTILPPPCLSE
Trigger: CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGGGCTGATGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CAA 90 bp ATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCACATTCCTCCTTCAGTGATGTTCTCTTaGCTCACCTGGTTAGAGTGC +
Preference number: 3 (lower is better)
Translates to: MCAPSPIPSRVHGVHIPPSVMFS*LTWLEC
Trigger: GCACTCTAACCAGGTGAGCAAAGAGAACATCACTGA...AGGAGGAATGTGGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CAA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGTACGTCCATGGTCTCTaGCTGCATGACAGACCACCC +
Preference number: 3 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLYVHGL*LHDRPP
Trigger: GGGTGGTCTGTCATGCAGCAAGAGACCATGGACGTA...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp GCAGGAATCCAGTTACGTCCATGGTCTCTTGCTGCATaGCAGACCACCCCAAGACTTGGTCGGTGGAAACGG +
Preference number: 3 (lower is better)
Translates to: AGIQLRPWSLAA*QTTPRLGRWKR
Trigger: CCGTTTCCACCGACCAAGTCTTGGGGTGGTCTGTCATGCAGCAAGAGACCATGGACGTAACTGGATTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp ATGTCAACTTCACTTCTAATCTGTGGCCTGCATGTGTaGGCCTTCCCCCATCCCATCCAGGGTGCACGGTGT +
Preference number: 3 (lower is better)
Translates to: MSTSLLICGLHV*AFPHPIQGARC
Trigger: ACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAGATTAGAAGTGAAGTTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp ATGGTCTCTTGCTGCATGACAGACCACCCCAAGACTTaGTCGGTGGAAACGGCAGTGGTGTTAGTTGCCAGG +
Preference number: 3 (lower is better)
Translates to: MVSCCMTDHPKT*SVETAVVLVAR
Trigger: CCTGGCAACTAACACCACTGCCGTTTCCACCGACCAAGTCTTGGGGTGGTCTGTCATGCAGCAAGAGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR-3UTR CAA 90 bp GGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTTGCGCTCCCCAGGGTaGCTCAAGTGGAAATTTTGT +
Preference number: 3 (lower is better)
Translates to: GWTLRNSGWWKEIHKEAALRSPG*LKWKFC
Trigger: ACAAAATTTCCACTTGAGCAACCCTGGGGAGCGCAA...GGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp GCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTaGGTGAGGCAGGAATCCAGTTACGTCCATGGTCTC +
Preference number: 3 (lower is better)
Translates to: ALTASPFSHHRV*VRQESSYVHGL
Trigger: GAGACCATGGACGTAACTGGATTCCTGCCTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR TCA 72 bp ATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTaGATTGGTGTTAGGGCCGGGTGGGGTTTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: IHKEAASQVRLG*IGVRAGWGLLF
Trigger: AAAAAGCAAACCCCACCCGGCCCTAACACCAATTCAACCCAACCTCACCTGGGAGGCTGCTTCCTTGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp CAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTaGTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCT +
Preference number: 3 (lower is better)
Translates to: QCRVALKCVICQ*FLQVTLAPIPP
Trigger: AGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp ATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTaGCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATT +
Preference number: 3 (lower is better)
Translates to: IVQCRVALKCVI*QCFLQVTLAPI
Trigger: AATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp CTGTCAGTGATGTTCTCTTTGCTCACCTGGTTAGAGTaGAGTTTTTCCACTGTATGGCTAACTGGGCCAGAT +
Preference number: 3 (lower is better)
Translates to: LSVMFSLLTWLE*SFSTVWLTGPD
Trigger: ATCTGGCCCAGTTAGCCATACAGTGGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAACATCACTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CCA 72 bp ACATTCCTCCTGTCAGTGATGTTCTCTTTGCTCACCTaGTTAGAGTGCAGTTTTTCCACTGTATGGCTAACT +
Preference number: 3 (lower is better)
Translates to: TFLLSVMFSLLT*LECSFSTVWLT
Trigger: AGTTAGCCATACAGTGGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAACATCACTGACAGGAGGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR GCA 72 bp TTATTTGACATTGTGCAGTGTAGAGTTGCCTTAAAGTaGGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTT +
Preference number: 3 (lower is better)
Translates to: LFDIVQCRVALK*VICQCFLQVTL
Trigger: AAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTGCAGGGCCCTGGGGCTaGCGAGCCGGGCTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PNSREPRGDPEPGALCAVAGPWG*RAGLVP
Trigger: CGGGACAAGCCCGGCTCGTCAGCCCCAGGGCCCTGC...AACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGCCCCCGCGGGGGTGCTaGCTGAGCTGCCTACGGAGG +
Preference number: 4 (lower is better)
Translates to: PWASARIRGEPPDVEEDSPPRGC*LSCLRR
Trigger: CCTCCGTAGGCAGCTCAGGCAGCACCCCCGCGGGGG...CGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCAAGCAGGCGCGGGGCATaGGCTGCAGGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPDRRGSPSSSSLPRTGASRRGA*AAGLPG
Trigger: CCCAGGCAGCCCTGCAGCGCATGCCCCGCGCCTGCT...TGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGCGATCCGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp GAGGATGGGGACGGGCAGAGCCTCGAGGGCGTCTCTAGCTCCGGCGACAGCGCAGCGGCAGGAGAGCGCTaGGTGCGCCTGCGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EDGDGQSLEGVSSSGDSAAAGER*VRLRGG
Trigger: GCCTCCTCGCAGGCGCACCCAGCGCTCTCCTGCCGC...TGCGCTGTCGCCGGAGCTAGAGACGCCCTCGAGGCTCTGCCCGTCCCCATCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp GAGGATGGGGACGGGCAGAGCCTCGAGGGCGTCTCTAGCTCCGGCGACAGCGCACCAGAGGCGCAGAGGTaGGCCGCTGTGCTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: EDGDGQSLEGVSSSGDSAPEAQR*AAVLSR
Trigger: ACGGGACAGCACAGCGGCTCACCTCTGCGCCTCTGG...TGCGCTGTCGCCGGAGCTAGAGACGCCCTCGAGGCTCTGCCCGTCCCCATCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp GAGGATGGGGACGGGCAGAGCCTCGAGGGCGTCTCTAGCTCCGGCGACAGCGCAAACTGCGCCAGAGCCTaGGGAGCTCCGCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: EDGDGQSLEGVSSSGDSANCARA*GAPRRA
Trigger: GGCTCTCCGCGGAGCTCCCCAGGCTCTGGCGCAGTT...TGCGCTGTCGCCGGAGCTAGAGACGCCCTCGAGGCTCTGCCCGTCCCCATCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCGGGTCCTCCTCTCCCTaGCCCTGGGCGGGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PALASEGSRRMWKKTRLSGSSSP*PWAGRS
Trigger: TGAGCGCCCCGCCCAGGGCCAGGGAGAGGAGGACCC...GGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp TCTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCCCTGGGGACGCCCTTaGCGATCCCCCGTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVACMCAPSPIPSRVHGVPWGRP*RSPVGH
Trigger: GTGCCCGACGGGGGATCGGCAAGGGCGTCCCCAGGG...GACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp ACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCGGGTGCTGCCTGAGCTaGCTACGGAGGCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: TRSPTLPPDRRGSPSSSSGCCLS*LRRRPL
Trigger: CAGGGGGCGCCTCCGTAGGCAGCTCAGGCAGCACCC...GCTGCTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp TCTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCGCGCGGGGCATGCGCTaGAGGGCTGCCTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SVACMCAPSPIPSRVHGVARGMR*RAAWEG
Trigger: TCCCTCCCAGGCAGCCCTGCAGCGCATGCCCCGCGC...GACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACTCCCTCCAGGAGGGTaGGCTCTGAGCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PPDRRGSPSSSSLPRTGALPPGG*ALSRLS
Trigger: GGAGAGCCTGCTCAGAGCGCACCCTCCTGGAGGGAG...TGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGCGATCCGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCAGCGCCTGCTGTGTGTaGGGCGGCCCTCCGCTCGGA +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVASACCV*GGPPLG
Trigger: TCCGAGCGGAGGGCCGCCCCACACACAGCAGGCGCT...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp GGGACGCCCTTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAGAGCAGCGGGGAGGCCTTCGCGTaGCTCTCGCACCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: GTPLPIPRRAPLRRRKSSGEAFA*LSHLME
Trigger: CTCCATCAGGTGCGAGAGCCACGCGAAGGCCTCCCC...GCTGCTCTTCCTCCTCCTCAGTGGTGCCCGACGGGGGATCGGCAAGGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTGGGGCACGGCGAAACTaGGAACCAAGAGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: PNSREPRGDPEPGALCAVGARRN*EPRGRT
Trigger: GGTGCGGCCTCTTGGTTCCCAGTTTCGCCGTGCCCC...AACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGGCAGGCAGAGGCGGTaGTCAGGTCCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: RSHPRGAAGCGRRLGFPAGRQRR*SGPQAG
Trigger: CCCGGCTTGGGGACCTGAGCACCGCCTCTGCCTGCC...TGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTTCCAGGTCCCACATCTaGAGCAGCAGGCGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: AEAVRHPAACPGQGHGETSRSHI*SSRRGA
Trigger: TGCCCCGCGCCTGCTGCTGCAGATGTGGGACCTGGA...AGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCTTGCTCCGGGTCTGTaGAGACGCGCACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QDAESDSATGSQRQSVIQLAPGL*RRAPQG
Trigger: CCCCTGGGGTGCGCGTCTCCACAGACCCGGAGCAAG...CTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCGCTGCAGGGCTGCCTaGGAGGGACAGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QDAESDSATGSQRQSVIQRCRAA*EGQRCF
Trigger: GAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAGCG...CTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTCCGCTTTGCCGGCCGTaGATCCCAGACGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: AEAVRHPAACPGQGHGETPLCRP*IPDEAL
Trigger: CAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGG...AGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCGCTTCCAAACAGCCGTaGGCCCCGCGGGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: PALASEGSRRMWKKTRLSASKQP*APRGSR
Trigger: TCTGGATCCCCGCGGGGCTCACGGCTGTTTGGAAGC...GGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCGCCAGGATCTGTGTATaGCTGGTCCCGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LWPACVRLPPSHPGCTVSARICV*LVPGVA
Trigger: GGCCACCCCCGGGACCAGTCATACACAGATCCTGGC...GGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGTGTGGCCTGCATGTGTaGGCCTTCCCCCATCCCATC +
Preference number: 4 (lower is better)
Translates to: PWASARIRGEPPDVEEDSCGLHV*AFPHPI
Trigger: GATGGGATGGGGGAAGGCGCACACATGCAGGCCACA...CGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCAGAGGTGAGCCGCTGTaGTGTCCCGTTCCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVARGEPL*CPVPEG
Trigger: CCCCTCCGGAACGGGACAGCACAGCGGCTCACCTCT...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCGGGAGCCGCCGGATGTaGAAGAAGACTCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LQGCLGGTALLPNSREPRGSRRM*KKTRLS
Trigger: GGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCC...GCGGGGCTCACGGCTGTTTGGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGGCCTTTCCACGCCCCTaGGTGGCGGCTTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QDAESDSATGSQRQSVIQAFPRP*VAASCG
Trigger: ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGC...CTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCAGAACCCGGGCTCAGTaGGGCTGTCCTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LQGCLGGTALLPNSREPRRTRAQ*GCPSCP
Trigger: AGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCT...GCGGGGCTCACGGCTGTTTGGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTAAGCTAGTGGCCAGGTaGAGACCTCCAAAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PNSREPRGDPEPGALCAVKLVAR*RPPKAR
Trigger: CCGCGCCTTTGGAGGTCTCCACCTGGCCACTAGCTT...AACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTGCCGTTCTGCCCCATTaGAGGCTCTGTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PNSREPRGDPEPGALCAVAVLPH*RLCAST
Trigger: TGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGC...AACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTGTTTTCCCGCCTGTCTaGGGGAAGCTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AEAVRHPAACPGQGHGETVFPPV*GKLKAW
Trigger: CCAGGCCTTCAGCTTCCCTCAGACAGGCGGGAAAAC...AGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp AGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTCCGGCAGCTGAGGAGGTCAAGGTTGCAGTaGGCTGAGATTGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: SPAGIQSPEPCALFRQLRRSRLQ*AEIEPL
Trigger: CAGTGGCTCAATCTCAGCTCACTGCAACCTTGACCT...CCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp TGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGCTCCCCGCGGGGGTGCTGCCTaGGCTGCCTACGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: CQCFLQVTLAPIPPVCAPRGGAA*AAYGGA
Trigger: GGCGCCTCCGTAGGCAGCTCAGGCAGCACCCCCGCG...GGGAGCGCAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp TTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCGAGCCCGGAGCCCTGTaGGCTGTTCCGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LWTSSACALNPLLRLSAPEPGAL*AVPAAE
Trigger: CTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTC...GGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTGCCTGTCAGGGCTGCTaGAAGACCTTCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: PNSREPRGDPEPGALCAVACQGC*KTFHFS
Trigger: GCTGAAGTGGAAGGTCTTCCAGCAGCCCTGACAGGC...AACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCCCTCCCAGCGCCATCAGCCCCAGCAAAGACCTCAGCATTGACTGCTTCACCATACGGAGGCGCCCCCTaGGGACGCCCTTGCCGATCC +
Preference number: 4 (lower is better)
Translates to: PLPAPSAPAKTSALTASPYGGAP*GRPCRS
Trigger: GGATCGGCAAGGGCGTCCCCAGGGGGCGCCTCCGTA...TGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGGGCTGATGGCGCTGGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp TGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGCCCCACTCTCTTCGCTaGCAGCCGGGCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WKTFHFSLALAEHQKTHEPHSLR*QPGPSL
Trigger: GAGGGAGGGGCCCGGCTGCCAGCGAAGAGAGTGGGG...CTCGTGGGTCTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCCTCACGCTAGGGCTCTaGCCTTGTTCCAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PALASEGSRRMWKKTRLSLTLGL*PCSRRR
Trigger: CCGCCTTCTGGAACAAGGTCAGAGCCCTAGCGTGAG...GGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTTCCTGTCCTGTCGGTaGCCTCCGTTGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVAFLSCR*PPLLEA
Trigger: GGCCTCCAACAACGGAGGCCACCGACAGGACAGGAA...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCTCCCACCACCGTGTCTaGGTGAGGCAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: LWPACVRLPPSHPGCTVSSHHRV*VRQESS
Trigger: ACTGGATTCCTGCCTCACTCAGACACGGTGGTGGGA...GGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp TGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGCGCGGAGTCCGACTCTaGCACCGGATCGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WKTFHFSLALAEHQKTHERGVRL*HRIAEA
Trigger: TGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCG...CTCGTGGGTCTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGCCATTGGAGGCTCTGTaGCAGCACACCAACAAGAAC +
Preference number: 4 (lower is better)
Translates to: PWASARIRGEPPDVEEDSPLEAL*QHTNKN
Trigger: GTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATGG...CGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTCTGTAAACACACCCTaGGCCAGCGCTCGCATCCGA +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVASVNTP*ASARIR
Trigger: TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGA...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp GCTCACGCTAGGGCTCTGACCTTGTTCCAGAAGGCGGGAGGCGGCAGGAGAGCGGGTGGGAGGATGGCTTaGAACTGGGAGGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: AHARALTLFQKAGGGRRAGGRMA*NWEVKV
Trigger: AACCTTGACCTCCCAGTTTCAAGCCATCCTCCCACC...CGCTCTCCTGCCGCCTCCCGCCTTCTGGAACAAGGTCAGAGCCCTAGCGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGCGCTGTTCCGGCAGCTaGGGCTCGGCTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLRCSGS*GSAGSS
Trigger: GGAGGACCCAGCCGAGCCTCAGCTGCCGGAACAGCG...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCACCACCGTGTCTGAGTaGGGCAGGAATCCAGTTACG +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVATTVSE*GRNPVT
Trigger: CGTAACTGGATTCCTGCCTCACTCAGACACGGTGGT...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp AGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTCCGGCAGCTGAGGAGAGTTGCCTTAAAGTaGGTGATCTGCCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPAGIQSPEPCALFRQLRRVALK*VICQCF
Trigger: AAAGCACTGGCAGATCACGCACTTTAAGGCAACTCT...CCTCAGCTGCCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTACGCCTGTCAGGGCTaGTGGAAGACCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVAYACQG*WKTFHF
Trigger: GAAGTGGAAGGTCTTCCAGCAGCCCTGACAGGCGTA...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTTCCTGTGGTGTTTGTaGACGTCCTCTGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVAFLWCL*TSSACA
Trigger: GGCACAGGCAGAGGACGTCCACAAACACCACAGGAA...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGGCCGCACCCCGAGGATaGGGACGGGCAGAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLAAPRG*GRAEPR
Trigger: TCGAGGCTCTGCCCGTCCCCATCCTCGGGGTGCGGC...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp GGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCGAGGCGGACTTGGGCTaGAGGGCCCTGGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GWTLRNSGWWKEIHKEAAEADLG*RALGAC
Trigger: ACAGGCACCCAGGGCCCTCCAGCCCAAGTCCGCCTC...GGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp TGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGCTCCAGGCTGGACACTaGGGAACTCCGGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: WKTFHFSLALAEHQKTHELQAGH*GTPVGG
Trigger: TCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGAG...CTCGTGGGTCTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp AAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGAGTGAGCAGGAGAGCGCTGGGTaGGCCTGCGAGGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KDLSIDCFTILPPPCLSEQESAG*ACEEAA
Trigger: GGCGGCCTCCTCGCAGGCGCACCCAGCGCTCTCCTG...CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp ATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCACATTCCTCCTTTCCACGCCCCTGGGTaGCGGCTTCCTGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: MCAPSPIPSRVHGVHIPPFHAPG*RLPVVF
Trigger: AAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAA...AGGAGGAATGTGGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCAGGAACTCCGGTTGGTaGAAAGAGATCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQGCLGGTALLPNSREPRRNSGW*KEIHKE
Trigger: TTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCT...GCGGGGCTCACGGCTGTTTGGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CAA 72 bp TGTATGACTGGTCCCGGGGGTGGCCGTTCTGCCCCATaGGAGGCTCTGTGCCAGCACACCAACAAGAACACC +
Preference number: 4 (lower is better)
Translates to: CMTGPGGGRSAP*EALCQHTNKNT
Trigger: GGTGTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCCCGGGACCAGTCATACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCTGGTCTCTTGCTGCATaGCAGACCACCCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: KGPREALTSVNTPWASARWSLAA*QTTPRL
Trigger: AAGTCTTGGGGTGGTCTGTCATGCAGCAAGAGACCA...GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCCAAAGACCTCAGCATTaGCTGCTTCACCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LWPACVRLPPSHPGCTVSQRPQH*LLHHSP
Trigger: GGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTG...GGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CCCCTCCCAGCGCCATCAGCCCCAGCAAAGACCTCAGCATTGACTGCTTCACCACCGATTCCTCCTGTTTaGGCTCCCCAGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PLPAPSAPAKTSALTASPPIPPV*APQGCS
Trigger: TGAGCAACCCTGGGGAGCGCAAACAGGAGGAATCGG...TGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGGGCTGATGGCGCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGTATGCCTGCGGCGAGTaGGGGGAGGCCTTCGCGTGG +
Preference number: 4 (lower is better)
Translates to: RDLPVLSSSHPCPDSSCLYACGE*GEAFAW
Trigger: CCACGCGAAGGCCTCCCCGCACTCGCCGCAGGCATA...CAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCTCCATGGTCTCTTGCTaGATGACAGACCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: KGPREALTSVNTPWASARSMVSC*MTDHPK
Trigger: CTTGGGGTGGTCTGTCATGCAGCAAGAGACCATGGA...GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCGACCTCAGCATTGACTaGTTCACCATTCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVADLSID*FTILPP
Trigger: TGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTC...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp TGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGCTCCCTCCCAGACGAGGCATTaGGCCTTTCCACGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CQCFLQVTLAPIPPVCAPSQTRH*AFPRPW
Trigger: CCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGA...GGGAGCGCAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGGCACCACAGCAGCCATaGCGGCCGGAAGCGCTACGC +
Preference number: 4 (lower is better)
Translates to: RDLPVLSSSHPCPDSSCLAPQQP*RPEALR
Trigger: GCGTAGCGCTTCCGGCCGCCATGGCTGCTGTGGTGC...CAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCCTGAGGAACTCCGGTTaGTGGAAAGAGATCCACAAG +
Preference number: 4 (lower is better)
Translates to: RFPEPGLSGAVLPVLSVALRNSG*WKEIHK
Trigger: CTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAG...GGCCACCGACAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTGGAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CAA 72 bp GACGCTGCCTCCAGGCTGGACACTGAGGAACTCCGGTaGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: DAASRLDTEELR*VERDPQGSSLP
Trigger: TGGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGAGGCAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGTGGCTCTCGCACCTaGTGGAGCACCACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RDLPVLSSSHPCPDSSCLRGSRT*WSTTAA
Trigger: GGCTGCTGTGGTGCTCCATCAGGTGCGAGAGCCACG...CAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGCAGGAGGGTGCGCTCTaGGCAGGCTCTCCTTGCATC +
Preference number: 4 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLQEGAL*AGSPCI
Trigger: GATGCAAGGAGAGCCTGCTCAGAGCGCACCCTCCTG...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp TCTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCTCTTCAAGTCACCCTTaGCCCGATTCCTCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SVACMCAPSPIPSRVHGVSSSHP*PDSSCL
Trigger: CAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGA...GACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp TGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGAAGACTCGGCTTTCCTaGAGCCATTTAGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WKTFHFSLALAEHQKTHEKTRLS*SHLVPP
Trigger: GGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTT...CTCGTGGGTCTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp TGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGTTTGTGGACGTCCTCTaGCTGTGCCCTGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: WKTFHFSLALAEHQKTHEFVDVL*LCPESA
Trigger: AGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAA...CTCGTGGGTCTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp GGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCGGGAAGCTGAAGGCCTaGCGGGTGCGGACACATATC +
Preference number: 4 (lower is better)
Translates to: GWTLRNSGWWKEIHKEAAGKLKA*RVRTHI
Trigger: GATATGTGTCCGCACCCGCCAGGCCTTCAGCTTCCC...GGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp GGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCTGGCAGGAACGGCTaGCCCTGCTCTGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GWTLRNSGWWKEIHKEAASGRNG*PCSVGK
Trigger: CTTTCCCACAGAGCAGGGCCAGCCGTTCCTGCCAGA...GGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGTTCACTTCTAATCTGTaGCCTGCATGTGTGCGCCTT +
Preference number: 4 (lower is better)
Translates to: QDAESDSATGSQRQSVIQFTSNL*PACVRL
Trigger: AAGGCGCACACATGCAGGCCACAGATTAGAAGTGAA...CTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCTGCGTGATCTGCCAGTaGTTTCTTCAAGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KGPREALTSVNTPWASARCVICQ*FLQVTL
Trigger: AAGGGTGACTTGAAGAAAGCACTGGCAGATCACGCA...GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGACGCTGCCTCCAGGCTaGACACTGAGGAACTCCGGT +
Preference number: 4 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLTLPPG*TLRNSG
Trigger: ACCGGAGTTCCTCAGTGTCCAGCCTGGAGGCAGCGT...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp AAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGAGTGAGTCAGCTTTCCCAGCCTaGCGCTGCCTCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KDLSIDCFTILPPPCLSESAFPA*RCLQAG
Trigger: TCCAGCCTGGAGGCAGCGTCAGGCTGGGAAAGCTGA...CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp CTGTGGCCTGCATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCTTAAAGTGCGTGATCTaGCAGTGCTTTCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LWPACVRLPPSHPGCTVSLKCVI*QCFLQV
Trigger: GACTTGAAGAAAGCACTGGCAGATCACGCACTTTAA...GGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACATGCAGGCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAATCTCCCGACCTCAGGTaGTCCTCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RAWPANAISNEGSKSPFKSPDLR*SSHLGL
Trigger: GAGGCCAAGGTGGGAGGATCACCTGAGGTCGGGAGA...TTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR TCA 90 bp ATAAGTCACCGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCATCACTTGCTCCCTCCTaGCTGCGAGACAAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ISHRAWPANAISNEGSKSSLAPS*LRDKGR
Trigger: GCGGCCTTTGTCTCGCAGTCAGGAGGGAGCAAGTGA...TGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401053.8
CDS-3UTR GCA 90 bp ATAAGTCACCGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCATTGCTCCCTCCTGACTaGGAGACAAAGGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: ISHRAWPANAISNEGSKSLLPPD*ETKAAA
Trigger: TGCCGCGGCCTTTGTCTCGCAGTCAGGAGGGAGCAA...TGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401053.8
CDS-3UTR GCA 90 bp TGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGGGCAGTGGTGTTAGTTaGCAGGATCTGTGTATGACT +
Preference number: 4 (lower is better)
Translates to: WKTFHFSLALAEHQKTHEGSGVS*QDLCMT
Trigger: AGTCATACACAGATCCTGGCAACTAACACCACTGCC...CTCGTGGGTCTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGGGTGGCGGCTTCCTGTaGTGTTTGTGGACGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RDLPVLSSSHPCPDSSCLGGGFL*CLWTSS
Trigger: AGAGGACGTCCACAAACACCACAGGAAGCCGCCACC...CAAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAAAGCACTGGCAGATCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CAA 72 bp CATGGTCTCTTGCTGCATGACAGACCACCCCAAGACTaGGTCGGTGGAAACGGCAGTGGTGTTAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HGLLLHDRPPQD*VGGNGSGVSCQ
Trigger: CTGGCAACTAACACCACTGCCGTTTCCACCGACCAAGTCTTGGGGTGGTCTGTCATGCAGCAAGAGACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTGCGTCTTCACAGGCGTaGAGGCCACCGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: PGQPMQFLMRAASHHLKVASSQA*RPPALP
Trigger: TGGCAGTGCCGGTGGCCTTCACGCCTGTGAAGACGC...AACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR TCA 90 bp CCCAGCAAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGTTTGGCCTTAGCTATTaGCCCCACTCTCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PSKDLSIDCFTILPPPCLFGLSY*PHSLRW
Trigger: CCAGCGAAGAGAGTGGGGTCAATAGCTAAGGCCAAA...CAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp AAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGAGTGAGCCATCCCATCCAGGGTaGACGGTGTCCACATTCCTC +
Preference number: 4 (lower is better)
Translates to: KDLSIDCFTILPPPCLSEPSHPG*TVSTFL
Trigger: GAGGAATGTGGACACCGTGCACCCTGGATGGGATGG...CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp ATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCACATTCCTCCTAGTTTTTCCACTGTATaGCTAACTGGGCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: MCAPSPIPSRVHGVHIPPSFSTV*LTGPDA
Trigger: TGCATCTGGCCCAGTTAGCCATACAGTGGAAAAACT...AGGAGGAATGTGGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp AGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGCAGCTGAGGCTCGGCTaGGTCCTCCTCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RLFDIVQCRVALKCVICQQLRLG*VLLSLA
Trigger: GGCCAGGGAGAGGAGGACCCAGCCGAGCCTCAGCTG...CTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCAAATAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR GCA 90 bp AGCCTTTTCGTACTTGGCGTGATGTCAACTTCACTTCTAATCTGTGGCCTGCATAGGAACGGCTGGCCCTaGTCTGTGGGAAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLFVLGVMSTSLLICGLHRNGWP*SVGKGR
Trigger: CCTCCCCTTTCCCACAGAGCAGGGCCAGCCGTTCCT...ATGCAGGCCACAGATTAGAAGTGAAGTTGACATCACGCCAAGTACGAAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp ATAAGTCACCGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCATCTGGGTACACGCCTTaGGGAAGTCTAGACTCCACC +
Preference number: 4 (lower is better)
Translates to: ISHRAWPANAISNEGSKSSGYTP*GSLDST
Trigger: GGTGGAGTCTAGACTTCCCCAAGGCGTGTACCCAGA...TGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR GCA 90 bp ATAAGTCACCGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCATTGCCCAGGCTGGAGTaGAATGGTACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ISHRAWPANAISNEGSKSLPRLE*NGTISA
Trigger: AGCTGAGATCGTACCATTGCACTCCAGCCTGGGCAA...TGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR GCA 90 bp GGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCCTCACCTGGTTAGAGTaGAGTTTTTCCACTGTATGG +
Preference number: 4 (lower is better)
Translates to: GWTLRNSGWWKEIHKEAALTWLE*SFSTVW
Trigger: CCATACAGTGGAAAAACTGCACTCTAACCAGGTGAG...GGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTGCTCCAGCAGGGAGATaGCATTCGGCTTCGGTAACC +
Preference number: 4 (lower is better)
Translates to: PGQPMQFLMRAASHHLKVAPAGR*HSASVT
Trigger: GGTTACCGAAGCCGAATGTCATCTCCCTGCTGGAGC...AACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR GCA 90 bp CGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAATTGCCCAGGCTGGAGTaGAATGGTACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RAWPANAISNEGSKSPFKLPRLE*NGTISA
Trigger: AGCTGAGATCGTACCATTGCACTCCAGCCTGGGCAA...TTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR GCA 90 bp CAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTACCGGCAGCCGACACTaGGCCGGCGCGAGCCTAACT +
Preference number: 4 (lower is better)
Translates to: QPMQFLMRAASHHLKVIVTGSRH*AGASLT
Trigger: AGTTAGGCTCGCGCCGGCGCAGTGTCGGCTGCCGGT...AACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401053.8
CDS-3UTR CCA 90 bp CAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTCTTGCTCCGGGTCTGTaGAGACGCGCACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QPMQFLMRAASHHLKVIVLAPGL*RRAPQG
Trigger: CCCCTGGGGTGCGCGTCTCCACAGACCCGGAGCAAG...AACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313434.10
CDS-3UTR CCA 90 bp CGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAATAAGTCACCGCGCCTaGCCAGCCAATGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: RAWPANAISNEGSKSPFKISHRA*PANAIS
Trigger: AGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT...TTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR TCA 90 bp TTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTGTCAGAAAGACTTGGCCCTGCTCCTCCTaGCTGCGAGACAAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: FLMRAASHHLKVIVVRKTWPCSS*LRDKGR
Trigger: GCGGCCTTTGTCTCGCAGTCAGGAGGAGCAGGGCCA...AGTCTTTCTGACAACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313434.10
CDS-3UTR TCA 90 bp TTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTGTCAGAAAGACTGCGTCTTCACAGGCGTaGAGGCCACCGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: FLMRAASHHLKVIVVRKTASSQA*RPPALP
Trigger: TGGCAGTGCCGGTGGCCTTCACGCCTGTGAAGACGC...AGTCTTTCTGACAACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR TCA 90 bp CAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTTCTCCCGACCTCAGGTaGTCCTCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QPMQFLMRAASHHLKVIVSPDLR*SSHLGL
Trigger: GAGGCCAAGGTGGGAGGATCACCTGAGGTCGGGAGA...AACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR TCA 90 bp CCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTCCATCTCAGAATCAGTaGGACTCTACGGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGQPMQFLMRAASHHLKVPSQNQ*DSTEAA
Trigger: AGCTGCTTCCGTAGAGTCTCACTGATTCTGAGATGG...AACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR GCA 90 bp AGCCTTTTCGTACTTGGCGTGATGTCAACTTCACTTCTAATCTGTGGCCTGCATTGCGCTCCCCAGGGTTaGTCAAGTGGAAATTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLFVLGVMSTSLLICGLHCAPQG*SSGNFV
Trigger: GACAAAATTTCCACTTGAGCAACCCTGGGGAGCGCA...ATGCAGGCCACAGATTAGAAGTGAAGTTGACATCACGCCAAGTACGAAAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp AGCCTTTTCGTACTTGGCGTGATGTCAACTTCACTTCTAATCTGTGGCCTGCATCACTGTATGGCTAACTaGGCCAGATGCAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SLFVLGVMSTSLLICGLHHCMAN*ARCRGL
Trigger: TAAGCCTCTGCATCTGGCCCAGTTAGCCATACAGTG...ATGCAGGCCACAGATTAGAAGTGAAGTTGACATCACGCCAAGTACGAAAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp CCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTGAAGGTCCTGAGTGTTaGTTATCTCCACGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGQPMQFLMRAASHHLKVEGPEC*LSPRFP
Trigger: AGGGAAACGTGGAGATAATCAACACTCAGGACCTTC...AACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR TCA 90 bp AGCCTTTTCGTACTTGGCGTGATGTCAACTTCACTTCTAATCTGTGGCCTGCATCATTCCTCCTGTCAGTaGTGTTCTCTTTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SLFVLGVMSTSLLICGLHHSSCQ*CSLCSP
Trigger: AGGTGAGCAAAGAGAACATCACTGACAGGAGGAATG...ATGCAGGCCACAGATTAGAAGTGAAGTTGACATCACGCCAAGTACGAAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
3UTR CAA 72 bp ACGGTGTCCACATTCCTCCTGTCAGTGATGTTCTCTTaGCTCACCTGGTTAGAGTGCAGTTTTTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: TVSTFLLSVMFS*LTWLECSFSTV
Trigger: TACAGTGGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAACATCACTGACAGGAGGAATGTGGACACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR TCA 90 bp TTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTGTCAGAAAGACTGCTCCAGCAGGGAGATaGCATTCGGCTTCGGTAACC +
Preference number: 4 (lower is better)
Translates to: FLMRAASHHLKVIVVRKTAPAGR*HSASVT
Trigger: GGTTACCGAAGCCGAATGTCATCTCCCTGCTGGAGC...AGTCTTTCTGACAACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS-3UTR CCA 90 bp AGCCTTTTCGTACTTGGCGTGATGTCAACTTCACTTCTAATCTGTGGCCTGCATTTCTCTTTGCTCACCTaGTTAGAGTGCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLFVLGVMSTSLLICGLHFSLLT*LECSFS
Trigger: GGAAAAACTGCACTCTAACCAGGTGAGCAAAGAGAA...ATGCAGGCCACAGATTAGAAGTGAAGTTGACATCACGCCAAGTACGAAAAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CCA 90 bp CAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTTCTAGTTTCCAAGTCTaGGTACACGCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QPMQFLMRAASHHLKVIVSSFQV*VHALGK
Trigger: CTTCCCCAAGGCGTGTACCCAGACTTGGAAACTAGA...AACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313434.10
CDS-3UTR CCA 90 bp TTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTGTCAGAAAGACTATGTCCCTTAATCTCTaGGTACACGCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FLMRAASHHLKVIVVRKTMSLNL*VHALGK
Trigger: CTTCCCCAAGGCGTGTACCCAGAGATTAAGGGACAT...AGTCTTTCTGACAACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401053.8
CDS-3UTR TCA 90 bp TTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTATAGTTGTCAGAAAGACTGAAGGTCCTGAGTGTTaGTTATCTCCACGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: FLMRAASHHLKVIVVRKTEGPEC*LSPRFP
Trigger: AGGGAAACGTGGAGATAATCAACACTCAGGACCTTC...AGTCTTTCTGACAACTATAACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313434.10
ENST00000401053.8
CDS GCA 90 bp CTCCGCGGAGAGCCGTCCAGGGCCCCGCGTACCCGTTTAAGCGCCTaGTGTGTGTGGGGCGGCCCTCCGCTCGGAGAAGGGCAGCCTAGG +
Preference number: 5 (lower is better)
Translates to: LRGEPSRAPRTRLSA*CVWGGPPLGEGQPR
Trigger: CCTAGGCTGCCCTTCTCCGAGCGGAGGGCCGCCCCACACACAGCAGGCGCTTAAACGGGTACGCGGGGCCCTGGACGGCTCTCCGCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp CAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCGGTGGCCTCCGTTGTaGGAGGCCTCCAGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: QDAESDSATGSQRQSVIQRWPPL*EASRSH
Trigger: GTGGGACCTGGAGGCCTCCAACAACGGAGGCCACCG...CTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp CCCGGGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGCACCTAGAGGCGGACTaGGGCTGGAGGGCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: PGGGRSAPLEALCQHTNKHLEAD*GWRALG
Trigger: ACCCAGGGCCCTCCAGCCCAAGTCCGCCTCTAGGTG...CTTGTTGGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTCCCGATTCCTCCTGTTaGCGCTCCCCAGGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: AEAVRHPAACPGQGHGETPDSSC*RSPGLL
Trigger: GAGCAACCCTGGGGAGCGCAAACAGGAGGAATCGGG...AGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp CGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCTGACGAGCCGGGCTaGTCCCGCGGGAAGCCCTAT +
Preference number: 5 (lower is better)
Translates to: RSHPRGAAGCGRRLGFPAADEPG*SRGKPY
Trigger: ATAGGGCTTCCCGCGGGACAAGCCCGGCTCGTCAGC...TGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp CCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCATCCCAGACGAGGCATaGGGCCTTTCCACGCCCCTG +
Preference number: 5 (lower is better)
Translates to: PALASEGSRRMWKKTRLSIPDEA*GLSTPL
Trigger: CAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGAT...GGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp GAGGATGGGGACGGGCAGAGCCTCGAGGGCGTCTCTAGCTCCGGCGACAGCGCACTGAGCAGGCTCTCCTaGCATCGTGCATCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: EDGDGQSLEGVSSSGDSALSRLS*HRASCG
Trigger: GCCACAAGATGCACGATGCAAGGAGAGCCTGCTCAG...TGCGCTGTCGCCGGAGCTAGAGACGCCCTCGAGGCTCTGCCCGTCCCCATCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp TTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCGCTAGGGCTCTGACCTaGTTCCAGAAGGCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LWTSSACALNPLLRLSAPARALT*FQKAGG
Trigger: GCCTCCCGCCTTCTGGAACAAGGTCAGAGCCCTAGC...GGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp TGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGTGTCGGTGGCCTCCGTaGTTGGAGGCCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: WKTFHFSLALAEHQKTHECRWPP*LEASRS
Trigger: GGACCTGGAGGCCTCCAACAACGGAGGCCACCGACA...CTCGTGGGTCTTCTGGTGCTCGGCTAGGGCCAGGCTGAAGTGGAAGGTCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp ATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCACATTCCTCCTGGCCGTTCTGCCCCATaGGAGGCTCTGTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: MCAPSPIPSRVHGVHIPPGRSAP*EALCQH
Trigger: GTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCC...AGGAGGAATGTGGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp GCTCACGCTAGGGCTCTGACCTTGTTCCAGAAGGCGGGAGGCGGCAGGAGAGCGAGGGCCGGGTGGGGTTaGCTTTTTCTTCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: AHARALTLFQKAGGGRRARAGWG*LFLQRL
Trigger: CAGCCTCTGAAGAAAAAGCAAACCCCACCCGGCCCT...CGCTCTCCTGCCGCCTCCCGCCTTCTGGAACAAGGTCAGAGCCCTAGCGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp GAGGATGGGGACGGGCAGAGCCTCGAGGGCGTCTCTAGCTCCGGCGACAGCGCATCAGTGATGTTCTCTTaGCTCACCTGGTTAGAGTGC +
Preference number: 5 (lower is better)
Translates to: EDGDGQSLEGVSSSGDSASVMFS*LTWLEC
Trigger: GCACTCTAACCAGGTGAGCAAAGAGAACATCACTGA...TGCGCTGTCGCCGGAGCTAGAGACGCCCTCGAGGCTCTGCCCGTCCCCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp CGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCATACGTCCATGGTCTCTaGCTGCATGACAGACCACCC +
Preference number: 5 (lower is better)
Translates to: RSHPRGAAGCGRRLGFPAYVHGL*LHDRPP
Trigger: GGGTGGTCTGTCATGCAGCAAGAGACCATGGACGTA...TGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp CAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGACTGAGGAACTCCGGTaGGTGGAAAGAGATCCACAA +
Preference number: 5 (lower is better)
Translates to: QDAESDSATGSQRQSVIQTEELR*VERDPQ
Trigger: TTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGT...CTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp AAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGAGTGAGTCCGGAGGGGCCGCTTaGCCGGCCGTGAATCCCAGA +
Preference number: 5 (lower is better)
Translates to: KDLSIDCFTILPPPCLSESGGAA*PAVNPR
Trigger: TCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGA...CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp ATGTGTGCGCCTTCCCCCATCCCATCCAGGGTGCACGGTGTCCACATTCCTCCTTTCTTCAAGTCACCCTaGCCCCGATTCCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: MCAPSPIPSRVHGVHIPPFFKSP*PRFLLF
Trigger: AAACAGGAGGAATCGGGGCAAGGGTGACTTGAAGAA...AGGAGGAATGTGGACACCGTGCACCCTGGATGGGATGGGGGAAGGCGCACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp CAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCTAGGTTATTTGACATaGTGCAGTGTAGAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: QDAESDSATGSQRQSVIQLGYLT*CSVELP
Trigger: AGGCAACTCTACACTGCACAATGTCAAATAACCTAG...CTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp ATAAGTCACCGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCAGTCTGGGTACACGCCTaGGGGAAGTCTAGACTCCAC +
Preference number: 5 (lower is better)
Translates to: ISHRAWPANAISNEGSKSVWVHA*GKSRLH
Trigger: GTGGAGTCTAGACTTCCCCAAGGCGTGTACCCAGAC...TGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313434.10
CDS-3UTR CAA 90 bp ATAAGTCACCGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACTCTGGGTACACGCCTaGGGGAAGTCTAGACTCCAC +
Preference number: 5 (lower is better)
Translates to: ISHRAWPANAISNEGSKSLWVHA*GKSRLH
Trigger: GTGGAGTCTAGACTTCCCCAAGGCGTGTACCCAGAG...TGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCGGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401053.8
CDS-3UTR CAA 90 bp CGCGCCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGTCCTCAAACGTCACTaGCTCCCTCCTGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: RAWPANAISNEGSKSPFKVLKRH*LPPDCE
Trigger: CTCGCAGTCAGGAGGGAGCAAGTGACGTTTGAGGAC...TTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401053.8
CDS-3UTR CAA 90 bp CCTGGCCAGCCAATGCAATTTCTAATGAGGGCAGCAAGTCACCATTTAAAGGTTGTCCTCAAACGTCACTaGCTCCGGGTCTGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: PGQPMQFLMRAASHHLKVVLKRH*LRVCGD
Trigger: GTCTCCACAGACCCGGAGCAAGTGACGTTTGAGGAC...AACCTTTAAATGGTGACTTGCTGCCCTCATTAGAAATTGCATTGGCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313434.10
CDS-3UTR CAA 90 bp AGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGGTCCTCAAACGTCACTaGCTCCGGGTCTGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: RLFDIVQCRVALKCVICQVLKRH*LRVCGD
Trigger: GTCTCCACAGACCCGGAGCAAGTGACGTTTGAGGAC...CTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCAAATAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1
CDS-3UTR CAA 90 bp AAAGACCTCAGCATTGACTGCTTCACCATTCTCCCACCACCGTGTCTGAGTGAGCCCATGCTAGGTTATTaGACATTGTGCAGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: KDLSIDCFTILPPPCLSEPMLGY*TLCSVE
Trigger: CTCTACACTGCACAATGTCAAATAACCTAGCATGGG...CTCACTCAGACACGGTGGTGGGAGAATGGTGAAGCAGTCAATGCTGAGGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515535.1