RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF121 (Homo sapiens)

Ensembl gene IDs: ENSG00000197961

Ensembl transcript IDs: ENST00000320451.7, ENST00000586602.5

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGAGACAGGAAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATaGGCTATAACTGTACTACACTCCAGCCTGGGCAAAAGGGAGACC +
Preference number: 1 (lower is better)
Translates to: QETGRSLEPVSLRLQ*AITVLHSSLGKRET
Trigger: GGTCTCCCTTTTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTTCCTGTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 90 bp GTCAATCAATGCAGCAATCTTCACTGCTGTCTTATTTTAAGAAACTaGCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGAC +
Preference number: 1 (lower is better)
Translates to: VNQCSNLHCCLILRN*HSHPDQQPSTLRQD
Trigger: GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAAAATAAGACAGCAGTGAAGATTGCTGCATTGATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 90 bp CACTCAATACCCATTGAACAACTCATTTTCTCCTCCACCAGCTTGTaGCAAATACCGCAGTACTTTGTTCTTCTGAGTTTGACGTTAGAT +
Preference number: 1 (lower is better)
Translates to: HSIPIEQLIFSSTSL*QIPQYFVLLSLTLD
Trigger: ATCTAACGTCAAACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAGTTGTTCAATGGGTATTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR TCA 90 bp TTCTACATTGTATGGCCCCATGGTGAGTTCTCAAATGTTGGATTGTaGCCACAATCCAATCCCTTGAGAAAAGAATGTGTATTAACAACG +
Preference number: 1 (lower is better)
Translates to: FYIVWPHGEFSNVGL*PQSNPLRKECVLTT
Trigger: CGTTGTTAATACACATTCTTTTCTCAAGGGATTGGATTGTGGTCACAATCCAACATTTGAGAACTCACCATGGGGCCATACAATGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR TCA 90 bp GGGCTGGCTTTCTTGTTAGAGGTCAATGCAGTTGGTGACTTTAAATaGATGCTAATATTCAATTACCATTCCAAAAATCCAAGAGCCAGT +
Preference number: 1 (lower is better)
Translates to: GLAFLLEVNAVGDFK*MLIFNYHSKNPRAS
Trigger: ACTGGCTCTTGGATTTTTGGAATGGTAATTGAATATTAGCATTCATTTAAAGTCACCAACTGCATTGACCTCTAACAAGAAAGCCAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 90 bp TTTATAGTGGTAGTCTGGAACAAAACTCACAATATCTACAGGGCATaGCTGTATCTTGTATCAATAGGGTTTCTCTTCTCCATTGCAACA +
Preference number: 1 (lower is better)
Translates to: FIVVVWNKTHNIYRA*LYLVSIGFLFSIAT
Trigger: TGTTGCAATGGAGAAGAGAAACCCTATTGATACAAGATACAGGCATGCCCTGTAGATATTGTGAGTTTTGTTCCAGACTACCACTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 90 bp CATTACCCCACAATGGCCTCTAACTGTTCAAGTGAAAGAAGGAGTTaGAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTC +
Preference number: 1 (lower is better)
Translates to: HYPTMASNCSSERRS*KFLTLDQKLEMINL
Trigger: GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCTTTCACTTGAACAGTTAGAGGCCATTGTGGGGTAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 90 bp CAGTACTTTGTTCTTCTGAGTTTGACGTTAGATACCCCATATAAGTaGAAATGGGTGTATTTGTCCTTTCGGAACTGGTTTATTTCACTT +
Preference number: 1 (lower is better)
Translates to: QYFVLLSLTLDTPYK*KWVYLSFRNWFISL
Trigger: AAGTGAAATAAACCAGTTCCGAAAGGACAAATACACCCATTTCCACTTATATGGGGTATCTAACGTCAAACTCAGAAGAACAAAGTACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 90 bp TTTGTTCTTCTGAGTTTGACGTTAGATACCCCATATAAGTGGAAATaGGTGTATTTGTCCTTTCGGAACTGGTTTATTTCACTTAGCATA +
Preference number: 1 (lower is better)
Translates to: FVLLSLTLDTPYKWK*VYLSFRNWFISLSI
Trigger: TATGCTAAGTGAAATAAACCAGTTCCGAAAGGACAAATACACCCATTTCCACTTATATGGGGTATCTAACGTCAAACTCAGAAGAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 90 bp CGAAGTTTGAGAGGATTAAGTCCAATTCTAAAAGAAGTTCCACTATaGGTAAAATGTTATCAAACAGCGTCGAATGCTAAAGAGAAGTTT +
Preference number: 1 (lower is better)
Translates to: RSLRGLSPILKEVPL*VKCYQTASNAKEKF
Trigger: AAACTTCTCTTTAGCATTCGACGCTGTTTGATAACATTTTACGCATAGTGGAACTTCTTTTAGAATTGGACTTAATCCTCTCAAACTTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTGGCGGGTGGATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 2 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAGGWIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATCCACCCGCC...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCCTGGGATCATGCCATTaGACTCCAGCCTGTGTGATG +
Preference number: 2 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLLGSCH*TPACVM
Trigger: CATCACACAGGCTGGAGTGCAATGGCATGATCCCAG...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGGGCAGGAGGACTGCTTaGGCCCAAGAGCTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLGRRTA*AQELET
Trigger: GGTCTCAAGCTCTTGGGCTCAAGCAGTCCTCCTGCC...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCATGAAGGCTGAGAGGTaGGTTAGCTGCAGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLMKAER*VSCRRN
Trigger: ATTTCTTCTGCAGCTAACTCACCTCTCAGCCTTCAT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAAACATTAAGGCAGGTGTaGTGGTGTGTGCCTGGAGTC +
Preference number: 2 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQTLRQV*WCVPGV
Trigger: GACTCCAGGCACACACCACCACACCTGCCTTAATGT...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAAGTAATCCAAGCTACTTaGAGGCTGAGGCAGAATCGC +
Preference number: 2 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQVIQAT*RLRQNR
Trigger: GCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTAC...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACGGCGGGTGGATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 2 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDGGWIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATCCACCCGCC...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTCTCAGGAGACTCAGGTaGGAGGATCGCTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSLRRLR*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCCACCTGAGTCTCCTGAG...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCCTCCTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 2 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLLLKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCAGGAG...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCAGTGGTTTCCTGAAATaGAATCTACTCCTGAAGATG +
Preference number: 2 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLSGFLK*NLLLKM
Trigger: CATCTTCAGGAGTAGATTTCATTTCAGGAAACCACT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCCTAACTCTAATTCTATaGAGGCTGAGAGGTGAGTTA +
Preference number: 2 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLLTLIL*RLRGEL
Trigger: TAACTCACCTCTCAGCCTTCATAGAATTAGAGTTAG...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGTGGAGTGCAGTGGTGTaGTCTCAGCTCACTCTAACC +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLWSAVV*SQLTLT
Trigger: GGTTAGAGTGAGCTGAGATCACACCACTGCACTCCA...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGGTAATCCAAGCTACTTaGAGGCTGAGGCAGAATCGC +
Preference number: 2 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKVIQAT*RLRQNR
Trigger: GCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTAC...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTACTTGTACTCCAGCATaGACAACACAGCGAGACCTT +
Preference number: 2 (lower is better)
Translates to: VKISTLRQVWWCVPGVLATCTPA*TTQRDL
Trigger: AAGGTCTCGCTGTGTTGTTCATGCTGGAGTACAAGT...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTCTGGGATCATGCCATTaGACTCCAGCCTGTGTGATG +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSLGSCH*TPACVM
Trigger: CATCACACAGGCTGGAGTGCAATGGCATGATCCCAG...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTCCAGGAGACAAAGGTTaGAGTGAGCTGGGATCATGC +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSPGDKG*SELGSC
Trigger: GCATGATCCCAGCTCACTGCAACCTTTGTCTCCTGG...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACGTCACGCTCTGTTGTaGTGGCTGGTCTTGAACTCT +
Preference number: 2 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTRHALL*WLVLNS
Trigger: AGAGTTCAAGACCAGCCAGCACAACAGAGCGTGACG...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGCCACTTTTCCCAGCCTaGGCTGGCTTTCTTGTTAGA +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLPLFPA*AGFLVR
Trigger: TCTAACAAGAAAGCCAGCCCAGGCTGGGAAAAGTGG...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTAGCCTCCTGAATAGCTaGGACTATAGGTGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSSLLNS*DYRCLP
Trigger: TGGCAGGCACCTATAGTCCCAGCTATTCAGGAGGCT...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACGGGACACATAGAGTATaGGTTCTTTCATGTCTTCGA +
Preference number: 2 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDGTHRV*VLSCLR
Trigger: TCGAAGACATGAAAGAACTCATACTCTATGTGTCCC...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCTGCAGCAATCTTCACTaGTGTCTTATTTTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLCSNLH*CLILRN
Trigger: GTTTCTTAAAATAAGACAGCAGTGAAGATTGCTGCA...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACCACTTTTCCCAGCCTaGGCTGGCTTTCTTGTTAGA +
Preference number: 2 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTPLFPA*AGFLVR
Trigger: TCTAACAAGAAAGCCAGCCCAGGCTGGGAAAAGTGG...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAGTGAATGGGGATAACTaGAGGCCTCCTCACATTCTT +
Preference number: 2 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTVNGDN*RPPHIL
Trigger: AAGAATGTGAGGAGGCCTTCAGTTATCCCCATTCAC...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTCACCAAAGTCTCACATaGTCATTAGCACTTTTTGGC +
Preference number: 2 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAHQSLT*SLALFG
Trigger: GCCAAAAAGTGCTAATGATCATGTGAGACTTTGGTG...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTTGTATGGCCCCATGGTaGGTTCTCAAATGTTGGATT +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSCMAPW*VLKCWI
Trigger: AATCCAACATTTGAGAACTCACCATGGGGCCATACA...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGCACCAAAGTCTCACATaGTCATTAGCACTTTTTGGC +
Preference number: 2 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKHQSLT*SLALFG
Trigger: GCCAAAAAGTGCTAATGATCATGTGAGACTTTGGTG...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGTGGAGCCTGAAGATGTaGCAGAATTGTTTCAATCTC +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLWSLKM*QNCFNL
Trigger: GAGATTGAAACAATTCTGTCACATCTTCAGGCTCCA...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTCTTATTTTAAGAAACTaGCACAGCCACCCTGATCAA +
Preference number: 2 (lower is better)
Translates to: VKISTLRQVWWCVPGVLALILRN*HSHPDQ
Trigger: TTGATCAGGGTGGCTGTGGCAGTTTCTTAAAATAAG...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTTTGAGGCTGCAATaGGCTATAACTGTACTACAC +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLSLRLQ*AITVLH
Trigger: GTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACT...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CAA 90 bp TCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTTaGACGTTAGATACCCCATATAAGTGGAAATGGGTGTATTTGTCC +
Preference number: 2 (lower is better)
Translates to: STSLWQIPQYFVLLS*TLDTPYKWKWVYLS
Trigger: GGACAAATACACCCATTTCCACTTATATGGGGTATCTAACGTCAAACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAAGACAAAGGTTGCAGTaGGCTGGGATCATGCCATTG +
Preference number: 2 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLRQRLQ*AGIMPL
Trigger: CAATGGCATGATCCCAGCTCACTGCAACCTTTGTCT...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTGGTTTCCTGAAATaGAATCTACTCCTGAAGATG +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLSGFLK*NLLLKM
Trigger: CATCTTCAGGAGTAGATTTCATTTCAGGAAACCACT...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACATGGAGCCTGAAGATGTaGCAGAATTGTTTCAATCTC +
Preference number: 2 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTWSLKM*QNCFNL
Trigger: GAGATTGAAACAATTCTGTCACATCTTCAGGCTCCA...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGATTAGAAGTGGAGCCTaGAGATGTGACAGAATTGTT +
Preference number: 2 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKIRSGA*RCDRIV
Trigger: AACAATTCTGTCACATCTTCAGGCTCCACTTCTAAT...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGATAACCCAGCAGTGCTaGAGTGGAATTAAAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLITQQC*SGIKSV
Trigger: AACACTTTTAATTCCACTGCAGCACTGCTGGGTTAT...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAAATACAAAAATTAGCTaGGTGTGGTTGACGGCACCT +
Preference number: 2 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTNTKIS*VWLTAP
Trigger: AGGTGCCGTCAACCACACCCAGCTAATTTTTGTATT...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGGCAGCCCATGGATTCTaGAATAATTCTGACTTTCAA +
Preference number: 2 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKAAHGF*NNSDFQ
Trigger: TTGAAAGTCAGAATTATTCCAGAATCCATGGGCTGC...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTCTAACTCTAATTCTATaGAGGCTGAGAGGTGAGTTA +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSLTLIL*RLRGEL
Trigger: TAACTCACCTCTCAGCCTTCATAGAATTAGAGTTAG...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACCCAGGAGACAAAGGTTaGAGTGAGCTGGGATCATGC +
Preference number: 2 (lower is better)
Translates to: KETKSATPVNTHIIRKENPGDKG*SELGSC
Trigger: GCATGATCCCAGCTCACTGCAACCTTTGTCTCCTGG...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTAATGGACATTTACTTTaGTTCCACCTCTTGGCTCTT +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSNGHLL*FHLLAL
Trigger: AAGAGCCAAGAGGTGGAAGCAAAGTAAATGTCCATT...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGACATTAACCAGAGTTTaGAAGAAGTTGATTCCAACC +
Preference number: 2 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKTLTRV*KKLIPT
Trigger: GGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGT...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAGCAGCCCATGGATTCTaGAATAATTCTGACTTTCAA +
Preference number: 2 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTAAHGF*NNSDFQ
Trigger: TTGAAAGTCAGAATTATTCCAGAATCCATGGGCTGC...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTCTGGATAAATTAAGTTaGAGACCTTGCAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSLDKLS*RPCRKD
Trigger: ATCCTTTCTGCAAGGTCTGCAACTTAATTTATCCAG...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTGGATAAATTAAGTTaGAGACCTTGCAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTLDKLS*RPCRKD
Trigger: ATCCTTTCTGCAAGGTCTGCAACTTAATTTATCCAG...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGCATGTTACTTCACTTTaGTTCATCTCACTTTACAGA +
Preference number: 2 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLHVTSL*FISLYR
Trigger: TCTGTAAAGTGAGATGAAGCAAAGTGAAGTAACATG...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTATTCACACATTGAGATaGTTTCTTCAGTTCCTTTGG +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSIHTLR*FLQFLW
Trigger: CCAAAGGAACTGAAGAAAGCATCTCAATGTGTGAAT...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTACATTAACCAGAGTTTaGAAGAAGTTGATTCCAACC +
Preference number: 2 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSTLTRV*KKLIPT
Trigger: GGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGT...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCTACTACACTCCAGCCTaGGCAAAAGGGAGACCATGT +
Preference number: 2 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLYYTPA*AKGRPC
Trigger: ACATGGTCTCCCTTTTGCCCAGGCTGGAGTGTAGTA...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCGTGAATGGGGATAACTaGAGGCCTCCTCACATTCTT +
Preference number: 2 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLVNGDN*RPPHIL
Trigger: AAGAATGTGAGGAGGCCTTCAGTTATCCCCATTCAC...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAAATACAAAAATTAGCTaGGTGTGGTTGACGGCACCT +
Preference number: 2 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLNTKIS*VWLTAP
Trigger: AGGTGCCGTCAACCACACCCAGCTAATTTTTGTATT...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACTGTATGGCCCCATGGTaGGTTCTCAAATGTTGGATT +
Preference number: 2 (lower is better)
Translates to: KETKSATPVNTHIIRKENCMAPW*VLKCWI
Trigger: AATCCAACATTTGAGAACTCACCATGGGGCCATACA...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTACTCCTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 2 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLLLKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCAGGAG...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTAATATCTACAGGGCATaGCTGTATCTTGTATCAATA +
Preference number: 2 (lower is better)
Translates to: NRDKTALLQEMPFRTFTANIYRA*LYLVSI
Trigger: TATTGATACAAGATACAGGCATGCCCTGTAGATATT...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR GCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCTTATTTTAAGAAACTaGCACAGCCACCCTGATCAA +
Preference number: 2 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDLILRN*HSHPDQ
Trigger: TTGATCAGGGTGGCTGTGGCAGTTTCTTAAAATAAG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACGGGACACATAGAGTATaGGTTCTTTCATGTCTTCGA +
Preference number: 2 (lower is better)
Translates to: KETKSATPVNTHIIRKENGTHRV*VLSCLR
Trigger: TCGAAGACATGAAAGAACTCATACTCTATGTGTCCC...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAAATGAAATCTACTCCTaGAGATGCTGTGAACATTGT +
Preference number: 2 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLNEIYS*RCCEHC
Trigger: ACAATGTTCACAGCATCTTCAGGAGTAGATTTCATT...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAAACCAAGAGCTCTTATaGAGGTATAAACAAGATTGG +
Preference number: 2 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLNQELL*RYKQDW
Trigger: CCAATCTTGTTTATACCTCCATAAGAGCTCTTGGTT...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACATTAGAAGTGGAGCCTaGAGATGTGACAGAATTGTT +
Preference number: 2 (lower is better)
Translates to: KETKSATPVNTHIIRKENIRSGA*RCDRIV
Trigger: AACAATTCTGTCACATCTTCAGGCTCCACTTCTAAT...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCAACCAAGAGCTCTTATaGAGGTATAAACAAGATTGG +
Preference number: 2 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLNQELL*RYKQDW
Trigger: CCAATCTTGTTTATACCTCCATAAGAGCTCTTGGTT...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 72 bp CTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGTTaGAGTGAGCTGGGATCATGCCATTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: LRQNRLNPGDKG*SELGSCHCTPA
Trigger: GGCTGGAGTGCAATGGCATGATCCCAGCTCACTGCAACCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGGCTGGGATCATGCCATaGCACTCCAGCCTGTGTGAT +
Preference number: 3 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRAGIMP*HSSLCD
Trigger: ATCACACAGGCTGGAGTGCAATGGCATGATCCCAGC...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGCTTGAGCCCAAGAGCTaGAGACCAGTCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLLEPKS*RPVWAT
Trigger: TGTTGCCCAGACTGGTCTCAAGCTCTTGGGCTCAAG...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp GGAAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATaGGCTATAACTGTACTACACTCCAGCCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: GRSLEPVSLRLQ*AITVLHSSLGK
Trigger: TTTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCAGAGTTTGGAAGAAGTaGATTCCAACCTTCATAGGT +
Preference number: 3 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLRVWKK*IPTFIG
Trigger: ACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTCCTGGGCTGGCTTTCTaGTTAGAGGTCAATGCAGTT +
Preference number: 3 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSPGLAF*LEVNAV
Trigger: AACTGCATTGACCTCTAACAAGAAAGCCAGCCCAGG...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR TCA 72 bp CAAGGCCCTAACTCTAATTCTATGAAGGCTGAGAGGTaGGTTAGCTGCAGAAGAAATGCTGGAAGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: QGPNSNSMKAER*VSCRRNAGSWQ
Trigger: TTGCCAGCTTCCAGCATTTCTTCTGCAGCTAACTCACCTCTCAGCCTTCATAGAATTAGAGTTAGGGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR TCA 72 bp CTTTTCCATCTTGCGTGGCTGACACTCAATACCCATTaGACAACTCATTTTCTCCTCCACCAGCTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: LFHLAWLTLNTH*TTHFLLHQLVA
Trigger: TGCCACAAGCTGGTGGAGGAGAAAATGAGTTGTTCAATGGGTATTGAGTGTCAGCCACGCAAGATGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTTGTAATCCAAGCTACTaGAAGGCTGAGGCAGAATCG +
Preference number: 3 (lower is better)
Translates to: NRDKTALLQEMPFRTFTACNPSY*KAEAES
Trigger: CGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTACA...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGGTGAGTTCTCAAATGTaGGATTGTGACCACAATCCA +
Preference number: 3 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLVSSQM*DCDHNP
Trigger: TGGATTGTGGTCACAATCCAACATTTGAGAACTCAC...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp CCCATTGAACAACTCATTTTCTCCTCCACCAGCTTGTaGCAAATACCGCAGTACTTTGTTCTTCTGAGTTTG +
Preference number: 3 (lower is better)
Translates to: PIEQLIFSSTSL*QIPQYFVLLSL
Trigger: CAAACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAGTTGTTCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACGCTGGGATCATGCCATaGCACTCCAGCCTGTGTGAT +
Preference number: 3 (lower is better)
Translates to: KETKSATPVNTHIIRKENAGIMP*HSSLCD
Trigger: ATCACACAGGCTGGAGTGCAATGGCATGATCCCAGC...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTGTGAGTTCTCAAATGTaGGATTGTGACCACAATCCA +
Preference number: 3 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSVSSQM*DCDHNP
Trigger: TGGATTGTGGTCACAATCCAACATTTGAGAACTCAC...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 72 bp AGGGAATTTGGAAAGCAAGAAATAACCCAGCAGTGCTaGAGTGGAATTAAAAGTGTTGGCTTGTGGTCATGT +
Preference number: 3 (lower is better)
Translates to: REFGKQEITQQC*SGIKSVGLWSC
Trigger: ACATGACCACAAGCCAACACTTTTAATTCCACTGCAGCACTGCTGGGTTATTTCTTGCTTTCCAAATTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 72 bp GTAGTCTGGAACAAAACTCACAATATCTACAGGGCATaGCTGTATCTTGTATCAATAGGGTTTCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: VVWNKTHNIYRA*LYLVSIGFLFS
Trigger: GGAGAAGAGAAACCCTATTGATACAAGATACAGGCATGCCCTGTAGATATTGTGAGTTTTGTTCCAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACATTAGCTGGGTGTGGTaGACGGCACCTGTAATCCAA +
Preference number: 3 (lower is better)
Translates to: KETKSATPVNTHIIRKENISWVW*TAPVIQ
Trigger: TTGGATTACAGGTGCCGTCAACCACACCCAGCTAAT...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTAGAGTTTGGAAGAAGTaGATTCCAACCTTCATAGGT +
Preference number: 3 (lower is better)
Translates to: NRDKTALLQEMPFRTFTARVWKK*IPTFIG
Trigger: ACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCT...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTAACATTAACCAGAGTTaGGAAGAAGTTGATTCCAAC +
Preference number: 3 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSNINQS*EEVDSN
Trigger: GTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTT...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACTGTAATCCAAGCTACTaGAAGGCTGAGGCAGAATCG +
Preference number: 3 (lower is better)
Translates to: KETKSATPVNTHIIRKENCNPSY*KAEAES
Trigger: CGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTACA...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp ACCACTGATAATGAACCTACTAACCAAGAGCTCTTATaGAGGTATAAACAAGATTGGCGTTTTCATGTCTGC +
Preference number: 3 (lower is better)
Translates to: TTDNEPTNQELL*RYKQDWRFHVC
Trigger: GCAGACATGAAAACGCCAATCTTGTTTATACCTCCATAAGAGCTCTTGGTTAGTAGGTTCATTATCAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 72 bp TTGTTTACCAATTCATCTGTCAATGGACATTTACTTTaGTTCCACCTCTTGGCTCTTCTGAATAATGCTGCA +
Preference number: 3 (lower is better)
Translates to: LFTNSSVNGHLL*FHLLALLNNAA
Trigger: TGCAGCATTATTCAGAAGAGCCAAGAGGTGGAAGCAAAGTAAATGTCCATTGACAGATGAATTGGTAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp GATGAGAGGCTGCTTTGTATAGATAAGCAAAGAAAGTaGTTTCCTGAAATGAAATCTACTCCTGAAGATGCT +
Preference number: 3 (lower is better)
Translates to: DERLLCIDKQRK*FPEMKSTPEDA
Trigger: AGCATCTTCAGGAGTAGATTTCATTTCAGGAAACCACTTTCTTTGCTTATCTATACAAAGCAGCCTCTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp GCGTTTTCATGTCTGCTAACCGCAGCCCATGGATTCTaGAATAATTCTGACTTTCAAGTCTTATTATTTAAG +
Preference number: 3 (lower is better)
Translates to: AFSCLLTAAHGF*NNSDFQVLLFK
Trigger: CTTAAATAATAAGACTTGAAAGTCAGAATTATTCCAGAATCCATGGGCTGCGGTTAGCAGACATGAAAACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp CTGAGTTTGACGTTAGATACCCCATATAAGTGGAAATaGGTGTATTTGTCCTTTCGGAACTGGTTTATTTCA +
Preference number: 3 (lower is better)
Translates to: LSLTLDTPYKWK*VYLSFRNWFIS
Trigger: TGAAATAAACCAGTTCCGAAAGGACAAATACACCCATTTCCACTTATATGGGGTATCTAACGTCAAACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR GCA 72 bp ACAATGGCCTCTAACTGTTCAAGTGAAAGAAGGAGTTaGAAATTTCTCACTTTAGATCAAAAGCTGGAAATG +
Preference number: 3 (lower is better)
Translates to: TMASNCSSERRS*KFLTLDQKLEM
Trigger: CATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCTTTCACTTGAACAGTTAGAGGCCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp TCATGTTATTGTGATATTCACTTTATAGTGGTAGTCTaGAACAAAACTCACAATATCTACAGGGCATGCCTG +
Preference number: 3 (lower is better)
Translates to: SCYCDIHFIVVV*NKTHNIYRACL
Trigger: CAGGCATGCCCTGTAGATATTGTGAGTTTTGTTCCAGACTACCACTATAAAGTGAATATCACAATAACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR-3UTR CAA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCCCACAATCCAATCCCTaGAGAAAAGAATGTGTATTA +
Preference number: 3 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLPQSNP*RKECVL
Trigger: TAATACACATTCTTTTCTCAAGGGATTGGATTGTGG...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp TCCATTCTAGATGCCATTAACAACATTTATGATTCATaGAAGGAGGTCAAAATATCAACATTAAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SILDAINNIYDS*KEVKISTLRQV
Trigger: CACCTGCCTTAATGTTGATATTTTGACCTCCTTCCATGAATCATAAATGTTGTTAATGGCATCTAGAATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CCA 72 bp TATATAATGCATTTTGTTTACCAATTCATCTGTCAATaGACATTTACTTTGCTTCCACCTCTTGGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: YIMHFVYQFICQ*TFTLLPPLGSS
Trigger: AGAAGAGCCAAGAGGTGGAAGCAAAGTAAATGTCCATTGACAGATGAATTGGTAAACAAAATGCATTATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGGGCGGGTGGATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRGGWIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATCCACCCGCC...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCCACTGCTCCACCAACTaGCCACTCTCCCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLHCSTN*PLSPLS
Trigger: GGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTG...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTGCGGCCTCTAGCCACTaGCCGCGCAAGGAGGACCGA +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAAASSH*PRKEDR
Trigger: TCGGTCCTCCTTGCGCGGCCAGTGGCTAGAGGCCGC...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586602.5
CDS-3UTR CCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACACACACTTCCCGACCTaGCTCCTGACTGGGACCCAC +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDTHFPT*LLTGTH
Trigger: GTGGGTCCCAGTCAGGAGCCAGGTCGGGAAGTGTGT...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586602.5
CDS-3UTR TCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCAGACAAAGGTTGCAGTaGGCTGGGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLRQRLQ*AGIMPL
Trigger: CAATGGCATGATCCCAGCTCACTGCAACCTTTGTCT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTGGCGGGTGGATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSGGWIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATCCACCCGCC...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCACTTGTACTCCAGCATaGACAACACAGCGAGACCTT +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLTCTPA*TTQRDL
Trigger: AAGGTCTCGCTGTGTTGTTCATGCTGGAGTACAAGT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGCCAGGAGACAAAGGTTaGAGTGAGCTGGGATCATGC +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRPGDKG*SELGSC
Trigger: GCATGATCCCAGCTCACTGCAACCTTTGTCTCCTGG...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGCACTGCTCCACCAACTaGCCACTCTCCCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKHCSTN*PLSPLS
Trigger: GGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTG...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGGTTAGCATGTGCCTGTaGTCCCAGGTACTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRVSMCL*SQVLRR
Trigger: TCTCCTGAGTACCTGGGACCACAGGCACATGCTAAC...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAATTGAGCCCAAGAGCTTaGGACCAGTCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQLSPRA*DQSGQH
Trigger: ATGTTGCCCAGACTGGTCTCAAGCTCTTGGGCTCAA...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTGGCAGGAGGACTGCTTaGGCCCAAGAGCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSGRRTA*AQELET
Trigger: GGTCTCAAGCTCTTGGGCTCAAGCAGTCCTCCTGCC...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGGGGTGCGTTAGCATGTaGCTGTGGTCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKGCVSM*LWSQVL
Trigger: GAGTACCTGGGACCACAGGCACATGCTAACGCACCC...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACAGCCTCCTGAATAGCTaGGACTATAGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDSLLNS*DYRCLP
Trigger: TGGCAGGCACCTATAGTCCCAGCTATTCAGGAGGCT...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGCTCAGGAGACTCAGGTaGGAGGATCGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLLRRLR*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCCACCTGAGTCTCCTGAG...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGCCTGCCTCAGCCTCCTaGATAGCTGGGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKPASAS*IAGTIG
Trigger: ACCTATAGTCCCAGCTATTCAGGAGGCTGAGGCAGG...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTTGGAGTGCAGTGGTGTaGTCTCAGCTCACTCTAACC +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAWSAVV*SQLTLT
Trigger: GGTTAGAGTGAGCTGAGATCACACCACTGCACTCCA...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGTCCATCTTGCGTGGCTaGCACTCAATACCCATTGAA +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRSILRG*HSIPIE
Trigger: TTCAATGGGTATTGAGTGTCAGCCACGCAAGATGGA...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCACTTTGGTTTTAACTTaGCATTCTTGGGGAACTCCG +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLTLVLT*HSWGTP
Trigger: CGGAGTTCCCCAAGAATGGCAAGTTAAAACCAAAGT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTCTGGGATCATGCCATTaGACTCCAGCCTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLALGSCH*TPACVM
Trigger: CATCACACAGGCTGGAGTGCAATGGCATGATCCCAG...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAAATTAGCTGGCCATGGTaGTGCACACCTGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQISWPW*CTPAVF
Trigger: AAAGACTGCAGGTGTGCACCACCATGGCCAGCTAAT...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACAAAATTAGCTGGCCATaGTGGTGCACACCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDKISWP*WCTPAV
Trigger: GACTGCAGGTGTGCACCACCATGGCCAGCTAATTTT...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CAA 72 bp CTACAGTGTGCTCTCATCGTGCTGGTGAATACCCACTaGTACTCCAGCATGAACAACACAGCGAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: LQCALIVLVNTH*YSSMNNTARPC
Trigger: ACAAGGTCTCGCTGTGTTGTTCATGCTGGAGTACAAGTGGGTATTCACCAGCACGATGAGAGCACACTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACGTGAATGGGGATAACTaGAGGCCTCCTCACATTCTT +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDVNGDN*RPPHIL
Trigger: AAGAATGTGAGGAGGCCTTCAGTTATCCCCATTCAC...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGTGTATGGCCCCATGGTaGGTTCTCAAATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRCMAPW*VLKCWI
Trigger: AATCCAACATTTGAGAACTCACCATGGGGCCATACA...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCATTAGAAGTGGAGCCTaGAGATGTGACAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLIRSGA*RCDRIV
Trigger: AACAATTCTGTCACATCTTCAGGCTCCACTTCTAAT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACTGCCCGGCTGCTCTGTaGTCTTTGATGTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDCPAAL*SLMFLF
Trigger: AAATAGGAACATCAAAGATCACAGAGCAGCCGGGCA...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAATGCCCGGCTGCTCTGTaGTCTTTGATGTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQCPAAL*SLMFLF
Trigger: AAATAGGAACATCAAAGATCACAGAGCAGCCGGGCA...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGTTGAGCCCAAGAGCTTaGGACCAGTCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKLSPRA*DQSGQH
Trigger: ATGTTGCCCAGACTGGTCTCAAGCTCTTGGGCTCAA...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCATAACCCAGCAGTGCTaGAGTGGAATTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLITQQC*SGIKSV
Trigger: AACACTTTTAATTCCACTGCAGCACTGCTGGGTTAT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCAATGGACATTTACTTTaGTTCCACCTCTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLNGHLL*FHLLAL
Trigger: AAGAGCCAAGAGGTGGAAGCAAAGTAAATGTCCATT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTCCACTTTTCCCAGCCTaGGCTGGCTTTCTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAPLFPA*AGFLVR
Trigger: TCTAACAAGAAAGCCAGCCCAGGCTGGGAAAAGTGG...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTTACTACACTCCAGCCTaGGCAAAAGGGAGACCATGT +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAYYTPA*AKGRPC
Trigger: ACATGGTCTCCCTTTTGCCCAGGCTGGAGTGTAGTA...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTAAAATTAGCTGGCCATaGTGGTGCACACCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAKISWP*WCTPAV
Trigger: GACTGCAGGTGTGCACCACCATGGCCAGCTAATTTT...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGGTTAGCATGTGCCTGTaGTCCCAGGTACTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKVSMCL*SQVLRR
Trigger: TCTCCTGAGTACCTGGGACCACAGGCACATGCTAAC...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACTCCTCCACCAGCTTGTaGCAAATACCGCAGTACTTT +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDSSTSL*QIPQYF
Trigger: AAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGA...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CAA 72 bp ACTCAGGAGACAGGAAGATCACTGGAACCCGTAAGTTaGAGGCTGCAATGGGCTATAACTGTACTACACTCC +
Preference number: 4 (lower is better)
Translates to: TQETGRSLEPVS*RLQWAITVLHS
Trigger: GGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTTCCTGTCTCCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CAA 72 bp GCTTTTCCATCTTGCGTGGCTGACACTCAATACCCATaGAACAACTCATTTTCTCCTCCACCAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: AFPSCVADTQYP*NNSFSPPPACG
Trigger: GCCACAAGCTGGTGGAGGAGAAAATGAGTTGTTCAATGGGTATTGAGTGTCAGCCACGCAAGATGGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAATGTATGGCCCCATGGTaGGTTCTCAAATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQCMAPW*VLKCWI
Trigger: AATCCAACATTTGAGAACTCACCATGGGGCCATACA...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAAATGAAGGCTGAGAGGTaGGTTAGCTGCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQMKAER*VSCRRN
Trigger: ATTTCTTCTGCAGCTAACTCACCTCTCAGCCTTCAT...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACTCCCGACCTGGCTCCTaGCTGGGACCCACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENSRPGS*LGPTEP
Trigger: AGGCTCAGTGGGTCCCAGTCAGGAGCCAGGTCGGGA...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586602.5
CDS-3UTR GCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACCAGGAGACAAAGGTTaGAGTGAGCTGGGATCATGC +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTPGDKG*SELGSC
Trigger: GCATGATCCCAGCTCACTGCAACCTTTGTCTCCTGG...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCATTCACACATTGAGATaGTTTCTTCAGTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLIHTLR*FLQFLW
Trigger: CCAAAGGAACTGAAGAAAGCATCTCAATGTGTGAAT...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTACATTAAGGCAGGTGTaGTGGTGTGTGCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSTLRQV*WCVPGV
Trigger: GACTCCAGGCACACACCACCACACCTGCCTTAATGT...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGTTCATTACCCCACAATaGCCTCTAACTGTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRFITPQ*PLTVQV
Trigger: CACTTGAACAGTTAGAGGCCATTGTGGGGTAATGAA...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTATCCACGTTCTCTGGTaGACATTTGGTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAIHVLW*TFGGRL
Trigger: CAGCCTGCCACCAAATGTTCACCAGAGAACGTGGAT...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGGTGATTCTTAAGGCATaGAGAGCTTCTGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRVILKA*RASEGF
Trigger: AAATCCTTCAGAAGCTCTTCATGCCTTAAGAATCAC...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTGTAATCCAAGCTACTTaGAGGCTGAGGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSVIQAT*RLRQNR
Trigger: GCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTAC...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACCACCAAAGTCTCACATaGTCATTAGCACTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDHQSLT*SLALFG
Trigger: GCCAAAAAGTGCTAATGATCATGTGAGACTTTGGTG...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAACACCAAAGTCTCACATaGTCATTAGCACTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQHQSLT*SLALFG
Trigger: GCCAAAAAGTGCTAATGATCATGTGAGACTTTGGTG...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGAGTGGTTTCCTGAAATaGAATCTACTCCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRSGFLK*NLLLKM
Trigger: CATCTTCAGGAGTAGATTTCATTTCAGGAAACCACT...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGCTCCGGTTGGCAATGTaGTCAACTTTTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKLRLAM*STFPSP
Trigger: AGGAGAAGGAAAAGTTGAGCACATTGCCAACCGGAG...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACACTTTGGTTTTAACTTaGCATTCTTGGGGAACTCCG +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDTLVLT*HSWGTP
Trigger: CGGAGTTCCCCAAGAATGGCAAGTTAAAACCAAAGT...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGCTTATTTTAAGAAACTaGCACAGCCACCCTGATCAA +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRLILRN*HSHPDQ
Trigger: TTGATCAGGGTGGCTGTGGCAGTTTCTTAAAATAAG...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTCGTCACGCTCTGTTGTaGTGGCTGGTCTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: NRDKTALLQEMPFRTFTARHALL*WLVLNS
Trigger: AGAGTTCAAGACCAGCCAGCACAACAGAGCGTGACG...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGGCAGCCCATGGATTCTaGAATAATTCTGACTTTCAA +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRAAHGF*NNSDFQ
Trigger: TTGAAAGTCAGAATTATTCCAGAATCCATGGGCTGC...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCTCAGGAGACTCAGGTaGGAGGATCGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDLRRLR*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCCACCTGAGTCTCCTGAG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGTCCTCCACCAGCTTGTaGCAAATACCGCAGTACTTT +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKSSTSL*QIPQYF
Trigger: AAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGA...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAAATGTTGTTGAGGTGCTaGCACTTTGGTTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQMLLRC*HFGFNL
Trigger: CAAGTTAAAACCAAAGTGTCAGCACCTCAACAACAT...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGGTATGGGTTCGCATGTaGCTATTAAGATATGAAGAA +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRVWVRM*LLRYEE
Trigger: TTCTTCATATCTTAATAGTCACATGCGAACCCATAC...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTGTGAATGGGGATAACTaGAGGCCTCCTCACATTCTT +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSVNGDN*RPPHIL
Trigger: AAGAATGTGAGGAGGCCTTCAGTTATCCCCATTCAC...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTGTAATCCAAGCTACTTaGAGGCTGAGGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAVIQAT*RLRQNR
Trigger: GCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTAC...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTACTTGTACTCCAGCATaGACAACACAGCGAGACCTT +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSTCTPA*TTQRDL
Trigger: AAGGTCTCGCTGTGTTGTTCATGCTGGAGTACAAGT...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACGGCAGGAGGACTGCTTaGGCCCAAGAGCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENGRRTA*AQELET
Trigger: GGTCTCAAGCTCTTGGGCTCAAGCAGTCCTCCTGCC...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACATCCATCTTGCGTGGCTaGCACTCAATACCCATTGAA +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTSILRG*HSIPIE
Trigger: TTCAATGGGTATTGAGTGTCAGCCACGCAAGATGGA...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGAGCAAACTTAACAAATaGTATGTTCTCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRSKLNK*YVLTAP
Trigger: TGGAGCAGTGAGAACATAGCATTTGTTAAGTTTGCT...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACGAAATAACCCAGCAGTaGTGCAGTGGAATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDEITQQ*CSGIKS
Trigger: ACTTTTAATTCCACTGCAGCACTGCTGGGTTATTTC...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACAATGGACATTTACTTTaGTTCCACCTCTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDNGHLL*FHLLAL
Trigger: AAGAGCCAAGAGGTGGAAGCAAAGTAAATGTCCATT...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACATTGGGGAACTCCGGTTaGCAATGTGCTCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTLGNSG*QCAQLF
Trigger: GAAAAGTTGAGCACATTGCCAACCGGAGTTCCCCAA...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTTCTCTGGTGAACATTTaGTGGCAGGCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSSLVNI*WQAEGF
Trigger: AAAGCCTTCAGCCTGCCACCAAATGTTCACCAGAGA...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTTTCATTACCCCACAATaGCCTCTAACTGTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAFITPQ*PLTVQV
Trigger: CACTTGAACAGTTAGAGGCCATTGTGGGGTAATGAA...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAGATCAGCAGGAGGCCTaGGCTTGTTTTCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLDQQEA*ACFPAT
Trigger: AGTTGCAGGAAAACAAGCTCAGGCCTCCTGCTGATC...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586602.5
CDS-3UTR GCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTCTCCGGTTGGCAATGTaGTCAACTTTTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NRDKTALLQEMPFRTFTALRLAM*STFPSP
Trigger: AGGAGAAGGAAAAGTTGAGCACATTGCCAACCGGAG...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCGTCACGCTCTGTTGTaGTGGCTGGTCTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDRHALL*WLVLNS
Trigger: AGAGTTCAAGACCAGCCAGCACAACAGAGCGTGACG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGCATGTTACTTCACTTTaGTTCATCTCACTTTACAGA +
Preference number: 4 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRHVTSL*FISLYR
Trigger: TCTGTAAAGTGAGATGAAGCAAAGTGAAGTAACATG...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCGGGTGCGTTAGCATGTaGCTGTGGTCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLGCVSM*LWSQVL
Trigger: GAGTACCTGGGACCACAGGCACATGCTAACGCACCC...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTGAAATAACCCAGCAGTaGTGCAGTGGAATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAEITQQ*CSGIKS
Trigger: ACTTTTAATTCCACTGCAGCACTGCTGGGTTATTTC...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTTTAACTTGCCATTCTTaGGGAACTCCGGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSLTCHS*GTPVGN
Trigger: ATTGCCAACCGGAGTTCCCCAAGAATGGCAAGTTAA...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGAGTTTGAGGCTGCAATaGGCTATAACTGTACTACAC +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKSLRLQ*AITVLH
Trigger: GTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACT...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTCCATATAAGTGGAAATaGGTGTATTTGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAPYKWK*VYLSFR
Trigger: CCGAAAGGACAAATACACCCATTTCCACTTATATGG...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGATGTTGTTGAGGTGCTaGCACTTTGGTTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKMLLRC*HFGFNL
Trigger: CAAGTTAAAACCAAAGTGTCAGCACCTCAACAACAT...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAAAGGCTTTTCTGCACTaGTTCAACACAGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTKAFLH*FNTESV
Trigger: GACACTTTCTGTGTTGAATCAGTGCAGAAAAGCCTT...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGGTGATTCTTAAGGCATaGAGAGCTTCTGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKVILKA*RASEGF
Trigger: AAATCCTTCAGAAGCTCTTCATGCCTTAAGAATCAC...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGCTCCTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKLLKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCAGGAG...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGATTAGAAGTGGAGCCTaGAGATGTGACAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLIRSGA*RCDRIV
Trigger: AACAATTCTGTCACATCTTCAGGCTCCACTTCTAAT...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACCCTGCCTCAGCCTCCTaGATAGCTGGGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENPASAS*IAGTIG
Trigger: ACCTATAGTCCCAGCTATTCAGGAGGCTGAGGCAGG...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGGGGGATCCTACTTATTaGATCTGGAAAAATATGTGC +
Preference number: 4 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLGDPTY*IWKNMC
Trigger: GCACATATTTTTCCAGATTCAATAAGTAGGATCCCC...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAAAATATCTACAGGGCATaGCTGTATCTTGTATCAATA +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQNIYRA*LYLVSI
Trigger: TATTGATACAAGATACAGGCATGCCCTGTAGATATT...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGCTTATTTTAAGAAACTaGCACAGCCACCCTGATCAA +
Preference number: 4 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLLILRN*HSHPDQ
Trigger: TTGATCAGGGTGGCTGTGGCAGTTTCTTAAAATAAG...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAAGTTCCCCTCCATTGTaGATTTCTGCCATTTGTATG +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTSSPPL*ISAICM
Trigger: CATACAAATGGCAGAAATCCACAATGGAGGGGAACT...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320451.7
CDS-3UTR CCA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGGCAGCCCATGGATTCTaGAATAATTCTGACTTTCAA +
Preference number: 4 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLAAHGF*NNSDFQ
Trigger: TTGAAAGTCAGAATTATTCCAGAATCCATGGGCTGC...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAATTAGCTGGCCATGGTaGTGCACACCTGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLISWPW*CTPAVF
Trigger: AAAGACTGCAGGTGTGCACCACCATGGCCAGCTAAT...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAACAATTCATCTGTCAATaGACATTTACTTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQQFICQ*TFTLLP
Trigger: TGGAAGCAAAGTAAATGTCCATTGACAGATGAATTG...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAATTGTCCTTTCGGAACTaGTTTATTTCACTTAGCATA +
Preference number: 4 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQLSFRN*FISLSI
Trigger: TATGCTAAGTGAAATAAACCAGTTCCGAAAGGACAA...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CAA 72 bp ATACCCATTGAACAACTCATTTTCTCCTCCACCAGCTaGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: IPIEQLIFSSTS*WQIPQYFVLLS
Trigger: ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAGTTGTTCAATGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGAATGAAATCTACTCCTaGAGATGCTGTGAACATTGT +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKNEIYS*RCCEHC
Trigger: ACAATGTTCACAGCATCTTCAGGAGTAGATTTCATT...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCTGGAGTGCAGTGGTGTaGTCTCAGCTCACTCTAACC +
Preference number: 4 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLWSAVV*SQLTLT
Trigger: GGTTAGAGTGAGCTGAGATCACACCACTGCACTCCA...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTAATATCTACAGGGCATaGCTGTATCTTGTATCAATA +
Preference number: 4 (lower is better)
Translates to: VKISTLRQVWWCVPGVLANIYRA*LYLVSI
Trigger: TATTGATACAAGATACAGGCATGCCCTGTAGATATT...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGAGCAAACTTAACAAATaGTATGTTCTCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKSKLNK*YVLTAP
Trigger: TGGAGCAGTGAGAACATAGCATTTGTTAAGTTTGCT...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAATAACCCAGCAGTGCTaGAGTGGAATTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTITQQC*SGIKSV
Trigger: AACACTTTTAATTCCACTGCAGCACTGCTGGGTTAT...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGAACCAAGAGCTCTTATaGAGGTATAAACAAGATTGG +
Preference number: 4 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKNQELL*RYKQDW
Trigger: CCAATCTTGTTTATACCTCCATAAGAGCTCTTGGTT...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTAGTTTGAGGCTGCAATaGGCTATAACTGTACTACAC +
Preference number: 4 (lower is better)
Translates to: NRDKTALLQEMPFRTFTASLRLQ*AITVLH
Trigger: GTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACT...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACAGCCTCCTGAATAGCTaGGACTATAGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENSLLNS*DYRCLP
Trigger: TGGCAGGCACCTATAGTCCCAGCTATTCAGGAGGCT...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
3UTR CAA 72 bp TTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTTaGACGTTAGATACCCCATATAAGTGGAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: LWQIPQYFVLLS*TLDTPYKWKWV
Trigger: CACCCATTTCCACTTATATGGGGTATCTAACGTCAAACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAGTATGGGTTCGCATGTaGCTATTAAGATATGAAGAA +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTVWVRM*LLRYEE
Trigger: TTCTTCATATCTTAATAGTCACATGCGAACCCATAC...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACAGACAAAGGTTGCAGTaGGCTGGGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENRQRLQ*AGIMPL
Trigger: CAATGGCATGATCCCAGCTCACTGCAACCTTTGTCT...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAATCAAAAGCTGGAAATaGTTAACCTCAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTIKSWK*LTSVRK
Trigger: CTTTCTCACTGAGGTTAATCATTTCCAGCTTTTGAT...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTGGGGATCCTACTTATTaGATCTGGAAAAATATGTGC +
Preference number: 4 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAGDPTY*IWKNMC
Trigger: GCACATATTTTTCCAGATTCAATAAGTAGGATCCCC...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCCCACTTTTCCCAGCCTaGGCTGGCTTTCTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLPLFPA*AGFLVR
Trigger: TCTAACAAGAAAGCCAGCCCAGGCTGGGAAAAGTGG...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACTACTACACTCCAGCCTaGGCAAAAGGGAGACCATGT +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENYYTPA*AKGRPC
Trigger: ACATGGTCTCCCTTTTGCCCAGGCTGGAGTGTAGTA...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTACTTTTCCATCTTGCGTaGCTGACACTCAATACCCAT +
Preference number: 4 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLLFHLA*LTLNTH
Trigger: ATGGGTATTGAGTGTCAGCCACGCAAGATGGAAAAG...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCTTTTCCATCTTGCGTaGCTGACACTCAATACCCAT +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDLFHLA*LTLNTH
Trigger: ATGGGTATTGAGTGTCAGCCACGCAAGATGGAAAAG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACAAGGCTTTTCTGCACTaGTTCAACACAGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDKAFLH*FNTESV
Trigger: GACACTTTCTGTGTTGAATCAGTGCAGAAAAGCCTT...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACGGGACACATAGAGTATaGGTTCTTTCATGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDGTHRV*VLSCLR
Trigger: TCGAAGACATGAAAGAACTCATACTCTATGTGTCCC...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTATGGAGCCTGAAGATGTaGCAGAATTGTTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLWSLKM*QNCFNL
Trigger: GAGATTGAAACAATTCTGTCACATCTTCAGGCTCCA...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACATGTTACTTCACTTTaGTTCATCTCACTTTACAGA +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTHVTSL*FISLYR
Trigger: TCTGTAAAGTGAGATGAAGCAAAGTGAAGTAACATG...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTATTCACACATTGAGATaGTTTCTTCAGTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAIHTLR*FLQFLW
Trigger: CCAAAGGAACTGAAGAAAGCATCTCAATGTGTGAAT...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACATTGTCCTTTCGGAACTaGTTTATTTCACTTAGCATA +
Preference number: 4 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTLSFRN*FISLSI
Trigger: TATGCTAAGTGAAATAAACCAGTTCCGAAAGGACAA...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCTCCTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDLLKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCAGGAG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCTAACTCTAATTCTATaGAGGCTGAGAGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDLTLIL*RLRGEL
Trigger: TAACTCACCTCTCAGCCTTCATAGAATTAGAGTTAG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAATTCAGAAGATAGCTTaGTGGGGATCCTACTTATTG +
Preference number: 4 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLIQKIA*WGSYLL
Trigger: CAATAAGTAGGATCCCCATCAAGCTATCTTCTGAAT...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACATTCAGAAGATAGCTTaGTGGGGATCCTACTTATTG +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDIQKIA*WGSYLL
Trigger: CAATAAGTAGGATCCCCATCAAGCTATCTTCTGAAT...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCTTAACTTGCCATTCTTaGGGAACTCCGGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLLTCHS*GTPVGN
Trigger: ATTGCCAACCGGAGTTCCCCAAGAATGGCAAGTTAA...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCCATATAAGTGGAAATaGGTGTATTTGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDPYKWK*VYLSFR
Trigger: CCGAAAGGACAAATACACCCATTTCCACTTATATGG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACACATTAACCAGAGTTTaGAAGAAGTTGATTCCAACC +
Preference number: 4 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDTLTRV*KKLIPT
Trigger: GGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGT...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTATGCAGCAATCTTCACTaGTGTCTTATTTTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLCSNLH*CLILRN
Trigger: GTTTCTTAAAATAAGACAGCAGTGAAGATTGCTGCA...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR TCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACATCAAAAGCTGGAAATaGTTAACCTCAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENIKSWK*LTSVRK
Trigger: CTTTCTCACTGAGGTTAATCATTTCCAGCTTTTGAT...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCCTGGATAAATTAAGTTaGAGACCTTGCAGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLLDKLS*RPCRKD
Trigger: ATCCTTTCTGCAAGGTCTGCAACTTAATTTATCCAG...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR GCA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACTCCATTGTGGATTTCTaGCATAAAATAGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: KETKSATPVNTHIIRKENSIVDF*HKIGSA
Trigger: TGCTGATCCTATTTTATGGCAGAAATCCACAATGGA...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586602.5
CDS-3UTR GCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCTGCAGCAATCTTCACTaGTGTCTTATTTTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLCSNLH*CLILRN
Trigger: GTTTCTTAAAATAAGACAGCAGTGAAGATTGCTGCA...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CCA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCCAATTCATCTGTCAATaGACATTTACTTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLQFICQ*TFTLLP
Trigger: TGGAAGCAAAGTAAATGTCCATTGACAGATGAATTG...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCCTTGAGCCCAAGAGCTaGAGACCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLLEPKS*RPVWAT
Trigger: TGTTGCCCAGACTGGTCTCAAGCTCTTGGGCTCAAG...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCCTGGAACCCGTAAGTTaGAGGCTGCAATGGGCTATA +
Preference number: 5 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLLEPVS*RLQWAI
Trigger: TATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAG...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGCTGGAACCCGTAAGTTaGAGGCTGCAATGGGCTATA +
Preference number: 5 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRLEPVS*RLQWAI
Trigger: TATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAG...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGGCTGGGATCATGCCATaGCACTCCAGCCTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLAGIMP*HSSLCD
Trigger: ATCACACAGGCTGGAGTGCAATGGCATGATCCCAGC...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCGAGCACGTGCTATTTTaGCAAGTGATGAAAGATAGC +
Preference number: 5 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLEHVLF*QVMKDS
Trigger: GCTATCTTTCATCACTTGCAAAAATAGCACGTGCTC...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCGTAGGCATTCACACATaGAGATGCTTTCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLVGIHT*RCFLQF
Trigger: GAACTGAAGAAAGCATCTCAATGTGTGAATGCCTAC...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAATTTAACTTGCCATTCTaGGGGAACTCCGGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQFNLPF*GNSGWQ
Trigger: TTGCCAACCGGAGTTCCCCAAGAATGGCAAGTTAAA...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCTGTGAGTTATCCTATTaGCCTGAAGATGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLCELSY*PEDVTD
Trigger: ATCAGTCACATCTTCAGGCAAATAGGATAACTCACA...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAATGTAATCCAAGCTACTaGAAGGCTGAGGCAGAATCG +
Preference number: 5 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQCNPSY*KAEAES
Trigger: CGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTACA...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGCTTGGGGAACTCCGGTaGGCAATGTGCTCAACTTTT +
Preference number: 5 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLLGELR*AMCSTF
Trigger: AAAAGTTGAGCACATTGCCAACCGGAGTTCCCCAAG...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTCAGAGTTCCCCTCCATaGTGGATTTCTGCCATTTGT +
Preference number: 5 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAQSSPP*WISAIC
Trigger: ACAAATGGCAGAAATCCACAATGGAGGGGAACTCTG...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320451.7
CDS-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTGCTGGGATCATGCCATaGCACTCCAGCCTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAAGIMP*HSSLCD
Trigger: ATCACACAGGCTGGAGTGCAATGGCATGATCCCAGC...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGATTAGCTGGGTGTGGTaGACGGCACCTGTAATCCAA +
Preference number: 5 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLISWVW*TAPVIQ
Trigger: TTGGATTACAGGTGCCGTCAACCACACCCAGCTAAT...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp TTAAGAAACTGCCACAGCCACCCTGATCAACAGCCATCAACACTGAGGCAAGACTTAGAAAATCACTTTTaGGACTGGGTGTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: LRNCHSHPDQQPSTLRQDLENHF*DWVWWL
Trigger: GAGCCACCACACCCAGTCCAAAAAGTGATTTTCTAA...GTCTTGCCTCAGTGTTGATGGCTGTTGATCAGGGTGGCTGTGGCAGTTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATGCTATGTTCTCACTGCTCCACCAACTGGCCACTCTCCCCTCTCTCCTCCTCGTGGAATTAAAAGTGTaGGCTTGTGGTCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: NAMFSLLHQLATLPSLLLVELKV*ACGHVF
Trigger: AAAAACATGACCACAAGCCAACACTTTTAATTCCAC...GAGGAGGAGAGAGGGGAGAGTGGCCAGTTGGTGGAGCAGTGAGAACATAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp ATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGAGTCTTGGGGAACTCCGGTaGGCAATGTGCTCAACTTTT +
Preference number: 5 (lower is better)
Translates to: IFSSTSLWQIPQYFVLLSLGELR*AMCSTF
Trigger: AAAAGTTGAGCACATTGCCAACCGGAGTTCCCCAAG...ACTCAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp CTCATTTTCTCCTCCACCAGCTTGTGGCAAATACCGCAGTACTTTGTTCTTCTGTTTAACTTGCCATTCTaGGGGAACTCCGGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: LIFSSTSLWQIPQYFVLLFNLPF*GNSGWQ
Trigger: TTGCCAACCGGAGTTCCCCAAGAATGGCAAGTTAAA...CAGAAGAACAAAGTACTGCGGTATTTGCCACAAGCTGGTGGAGGAGAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTCACTTTGGTTTTAACTaGCCATTCTTGGGGAACTCC +
Preference number: 5 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAHFGFN*PFLGNS
Trigger: GGAGTTCCCCAAGAATGGCAAGTTAAAACCAAAGTG...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGAGAGTTTGGAAGAAGTaGATTCCAACCTTCATAGGT +
Preference number: 5 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRRVWKK*IPTFIG
Trigger: ACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCT...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp CGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTCCAGCCTGGGCAAAGAGACAGACTGAGTTaGAATAGGTCAAAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: RKFEAAMGYNCTTLQPGQRDRLS*NRSKVA
Trigger: AGCAACCTTTGACCTATTCAAACTCAGTCTGTCTCT...TTGCCCAGGCTGGAGTGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586602.5
CDS-3UTR CAA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACATGTAATCCAAGCTACTaGAAGGCTGAGGCAGAATCG +
Preference number: 5 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTCNPSY*KAEAES
Trigger: CGATTCTGCCTCAGCCTTCAAGTAGCTTGGATTACA...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTGTGAGTTCTCAAATGTaGGATTGTGACCACAATCCA +
Preference number: 5 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAVSSQM*DCDHNP
Trigger: TGGATTGTGGTCACAATCCAACATTTGAGAACTCAC...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTCCTGGGCTGGCTTTCTaGTTAGAGGTCAATGCAGTT +
Preference number: 5 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAPGLAF*LEVNAV
Trigger: AACTGCATTGACCTCTAACAAGAAAGCCAGCCCAGG...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGTCATGTTACTTCACTTaGCTTCATCTCACTTTACAG +
Preference number: 5 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRSCYFT*LHLTLQ
Trigger: CTGTAAAGTGAGATGAAGCAAAGTGAAGTAACATGA...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AATCCAAGCTACTTGAAGGCTGAGGCAGAATCGCCTGAACCCAGGAGACAAAGGTGGGGATCCTACTTATaGAATCTGGAAAAATATGTG +
Preference number: 5 (lower is better)
Translates to: NPSYLKAEAESPEPRRQRWGSYL*NLEKYV
Trigger: CACATATTTTTCCAGATTCAATAAGTAGGATCCCCA...CCTTTGTCTCCTGGGTTCAGGCGATTCTGCCTCAGCCTTCAAGTAGCTTGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp GTCAAAATATCAACATTAAGGCAGGTGTGGTGGTGTGTGCCTGGAGTCTTGGCTGTAGGCATTCACACATaGAGATGCTTTCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: VKISTLRQVWWCVPGVLAVGIHT*RCFLQF
Trigger: GAACTGAAGAAAGCATCTCAATGTGTGAATGCCTAC...AGCCAAGACTCCAGGCACACACCACCACACCTGCCTTAATGTTGATATTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGCTTTGCTTCCACCTCTaGGCTCTTCTGAATAATGCT +
Preference number: 5 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKLCFHL*ALLNNA
Trigger: AGCATTATTCAGAAGAGCCAAGAGGTGGAAGCAAAG...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTAAGAGACAGACTGAGTTaGAATAGGTCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLRDRLS*NRSTAR
Trigger: CCTGGCTGTGGACCTATTCAAACTCAGTCTGTCTCT...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320451.7
CDS-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTCACTTTGGTTTTAACTaGCCATTCTTGGGGAACTCC +
Preference number: 5 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAHFGFN*PFLGNS
Trigger: GGAGTTCCCCAAGAATGGCAAGTTAAAACCAAAGTG...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTGTATTCAAAGGATTaGTCTCCTATCCACGTTCTC +
Preference number: 5 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTLYSKD*SPIHVL
Trigger: GAGAACGTGGATAGGAGACAAATCCTTTGAATACAG...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACAGTGAGTTCTCAAATGTaGGATTGTGACCACAATCCA +
Preference number: 5 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTVSSQM*DCDHNP
Trigger: TGGATTGTGGTCACAATCCAACATTTGAGAACTCAC...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAGATCACTGGAACCCGTAAGTTTGAGGCTGCAATGGGCTATAACTGTACTACACTTTCTTCAGTTCCTTaGGACATGTACCTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: KITGTRKFEAAMGYNCTTLSSVP*DMYLEV
Trigger: CACTTCTAGGTACATGTCCAAAGGAACTGAAGAAAG...TGTAGTACAGTTATAGCCCATTGCAGCCTCAAACTTACGGGTTCCAGTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTCTGTATTCAAAGGATTaGTCTCCTATCCACGTTCTC +
Preference number: 5 (lower is better)
Translates to: NRDKTALLQEMPFRTFTALYSKD*SPIHVL
Trigger: GAGAACGTGGATAGGAGACAAATCCTTTGAATACAG...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp GCTGCAGAAGAAATGCTGGAAGCTGGCAAAGATCAGTTCGTGAGGTTTAACAAGCCACAATCCAATCCCTaGAGAAAAGAATGTGTATTA +
Preference number: 5 (lower is better)
Translates to: AAEEMLEAGKDQFVRFNKPQSNP*RKECVL
Trigger: TAATACACATTCTTTTCTCAAGGGATTGGATTGTGG...CTTGTTAAACCTCACGAACTGATCTTTGCCAGCTTCCAGCATTTCTTCTGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACCCTGGGCTGGCTTTCTaGTTAGAGGTCAATGCAGTT +
Preference number: 5 (lower is better)
Translates to: KETKSATPVNTHIIRKENPGLAF*LEVNAV
Trigger: AACTGCATTGACCTCTAACAAGAAAGCCAGCCCAGG...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTATTAGAAAATCACTTTTaGGACTGGGTGTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLLENHF*DWVWWL
Trigger: GAGCCACCACACCCAGTCCAAAAAGTGATTTTCTAA...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTGACACTCAATACCCATaGAACAACTCATTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: NRDKTALLQEMPFRTFTADTQYP*NNSFSP
Trigger: AGGAGAAAATGAGTTGTTCAATGGGTATTGAGTGTC...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTACAGAGTTCCCCTCCATaGTGGATTTCTGCCATAAAA +
Preference number: 5 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLQSSPP*WISAIK
Trigger: TTTTATGGCAGAAATCCACAATGGAGGGGAACTCTG...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586602.5
CDS-3UTR CAA 90 bp AACAGAGACAAAACAGCCTTACTTCAGGAGATGCCATTTAGGACTTTCACAGCTGTGGAATTAAAAGTGTaGGCTTGTGGTCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: NRDKTALLQEMPFRTFTAVELKV*ACGHVF
Trigger: AAAAACATGACCACAAGCCAACACTTTTAATTCCAC...AGCTGTGAAAGTCCTAAATGGCATCTCCTGAAGTAAGGCTGTTTTGTCTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACTGTGAGTTATCCTATTaGCCTGAAGATGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDCELSY*PEDVTD
Trigger: ATCAGTCACATCTTCAGGCAAATAGGATAACTCACA...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCCTTTGCTTCCACCTCTaGGCTCTTCTGAATAATGCT +
Preference number: 5 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLLCFHL*ALLNNA
Trigger: AGCATTATTCAGAAGAGCCAAGAGGTGGAAGCAAAG...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACACCCTTTCACATACTTaGTGTGTACCGAAGAGTATT +
Preference number: 5 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDTLSHT*CVPKSI
Trigger: AATACTCTTCGGTACACACAAAGTATGTGAAAGGGT...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGCAACAGCTACAGACATACCTCATGTTACTTCACTTTGCTTCATCTCACTTTACCACAATCCAATCCCTaGAGAAAAGAATGTGTATTA +
Preference number: 5 (lower is better)
Translates to: SNSYRHTSCYFTLLHLTLPQSNP*RKECVL
Trigger: TAATACACATTCTTTTCTCAAGGGATTGGATTGTGG...TAAAGTGAGATGAAGCAAAGTGAAGTAACATGAGGTATGTCTGTAGCTGTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACCCTATTTTAATTGTTTaGGGGTACCACAAACCACAA +
Preference number: 5 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDPILIV*GYHKPQ
Trigger: TTGTGGTTTGTGGTACCCCAAAACAATTAAAATAGG...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAACCAACATTAACCAGAGTTTGGAAGAAGTTGATTCCAACCTTCATAGGTGACTCATGTTACTTCACTTaGCTTCATCTCACTTTACAG +
Preference number: 5 (lower is better)
Translates to: KPTLTRVWKKLIPTFIGDSCYFT*LHLTLQ
Trigger: CTGTAAAGTGAGATGAAGCAAAGTGAAGTAACATGA...GTCACCTATGAAGGTTGGAATCAACTTCTTCCAAACTCTGGTTAATGTTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCCTTTCTTCAGTTCCTTaGGACATGTACCTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLLSSVP*DMYLEV
Trigger: CACTTCTAGGTACATGTCCAAAGGAACTGAAGAAAG...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCGACACTCAATACCCATaGAACAACTCATTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLDTQYP*NNSFSP
Trigger: AGGAGAAAATGAGTTGTTCAATGGGTATTGAGTGTC...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AGAAGGAGTTGCAAATTTCTCACTTTAGATCAAAAGCTGGAAATGATTAACCTCACCCTTTCACATACTTaGTGTGTACCGAAGAGTATT +
Preference number: 5 (lower is better)
Translates to: RRSCKFLTLDQKLEMINLTLSHT*CVPKSI
Trigger: AATACTCTTCGGTACACACAAAGTATGTGAAAGGGT...GAGGTTAATCATTTCCAGCTTTTGATCTAAAGTGAGAAATTTGCAACTCCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5
CDS-3UTR CAA 90 bp AAGGAAACTAAAAGTGCTACTCCAGTGAACACACACATAATAAGAAAGGAAAACCCTATTTTAATTGTTTaGGGGTACCACAAACCACAA +
Preference number: 5 (lower is better)
Translates to: KETKSATPVNTHIIRKENPILIV*GYHKPQ
Trigger: TTGTGGTTTGTGGTACCCCAAAACAATTAAAATAGG...GTTTTCCTTTCTTATTATGTGTGTGTTCACTGGAGTAGCACTTTTAGTTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320451.7
ENST00000586602.5