Pregenerated sensors for ZNF117 (Homo sapiens)
Ensembl gene IDs: ENSG00000152926Ensembl transcript IDs: ENST00000282869.11, ENST00000487644.1, ENST00000620222.4
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATGGCATGTGGATCACTTaGGGTCAGGAGTTCAAGATC | + |
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Preference number: 2 (lower is better) Translates to: AGVDGYFICPDVINTYSYGMWIT*GQEFKI Trigger: GATCTTGAACTCCTGACCTCAAGTGATCCACATGCC...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATATTAGCCAAATGTGGTaGTGTGTGCCTGTAGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: AGVDGYFICPDVINTYSYISQMW*CVPVVS Trigger: TGAGACTACAGGCACACACCACCACATTTGGCTAAT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAAAATTAGCCAAATGTaGTGGTGTGTGCCTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: AGVDGYFICPDVINTYSYKISQM*WCVPVV Trigger: GACTACAGGCACACACCACCACATTTGGCTAATTTT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATCTGTACTCAGCACACTaGTTAGTTCAATGTCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: AGVDGYFICPDVINTYSYLYSAH*LVQCLK Trigger: TTTTAGACATTGAACTAATCAGTGTGCTGAGTACAG...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| 3UTR GCA 72 bp | CAAATGATAAATGCTGGAGTTGATGGATATTTCATTTaGCCTGATGTGATTAATACCTATTCATATGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: QMINAGVDGYFI*PDVINTYSYAC Trigger: ACAGGCATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGCATTTATCATTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAGGTGGAGGTTGCAGTaGGTCGAGATCATGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYRWRLQ*VEIMPL Trigger: CAGTGGCATGATCTCGACTCACTGCAACCTCCACCT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTGCACTCCATCCTGGTaGCACAGCAAGACTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYCTPSW*HSKTPS Trigger: AGATGGAGTCTTGCTGTGTCACCAGGATGGAGTGCA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTGTCAATGGTCCCTGTaGTCCCAGCTACTCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYCQWSL*SQLLRR Trigger: TCTCCTGAGTAGCTGGGATCACAGGGACCATTGACA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAGTGAGTCGAGATCATaGCACTGCACTCCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYSESRS*HCTPSW Trigger: CCAGGATGGAGTGCAGTGGCATGATCTCGACTCACT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATGGCCGGAGAGATCACTaGGTGCAACAGGAAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYGRRDH*VQQEGF Trigger: AAAACCTTCCTGTTGCACCCAGTGATCTCTCCGGCC...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTGTTTTTCTCATCCCTaGTCCTGGAGCCCACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYCFSHP*SWSPLL Trigger: AAGGAGTGGGCTCCAGGAGCAGGGATGAGAAAAACA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTTTTGGCGCAAAACCTaGGAGGTGAGAAAGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYFWRKT*EVRKQS Trigger: AGACTGCTTTCTCACCTCGCAGGTTTTGCGCCAAAA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATCTTGACTTTTATACATaGATCAGGCAGGGGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYLDFYT*IRQGQV Trigger: GACTTGCCCCTGCCTGATGCATGTATAAAAGTCAAG...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAGATGCGGGCTAGGTTaGAGAGAAAAAGGAATGCTT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYRCGLG*REKGML Trigger: AAGCATTCCTTTTTCTCTGCAACCTAGCCCGCATCT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAAAGTCAATGACAGATaGGGGCTAGGTTGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYKVNDR*GLGCRE Trigger: TTCTCTGCAACCTAGCCCGCATCTGTCATTGACTTT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTGGAGTGAGTCAGACTaGTCAGGAAAGGACTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYWSESD*SGKDLF Trigger: AAACAAGTCCTTTCCTGACCAGTCTGACTCACTCCA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTTGCCACAATATATTTaGACTCCAGCCTGGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYLPQYI*TPAWAI Trigger: TATTGCCCAGGCTGGAGTGCAAATATATTGTGGCAA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATGTGTTCAATGAGTTTTaGGGATCAGGTAGAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYVFNEF*GSGRSF Trigger: AAAGCTTCTACCTGATCCTCAAAACTCATTGAACAC...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATGATAAATGCTGGAGTTaGTGGATATTTCATTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYDKCWS*WIFHLP Trigger: GGGCAAATGAAATATCCATCAACTCCAGCATTTATC...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATCTTGTGACCTTGCCATaGTACAGAAAGAAAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYLVTLP*YRKKNK Trigger: CTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAG...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATCTGCTTCATGGAATCTaGTACAATCAACAAAATGAG | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYLLHGI*YNQQNE Trigger: CTCATTTTGTTGATTGTATCAGATTCCATGAAGCAG...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATGCAGAGAAAAAGGAATaGTTATATGTTGTGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYAEKKE*LYVVGI Trigger: GATTCCCACAACATATAAGCATTCCTTTTTCTCTGC...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTATGAAGAAAAGGAATaGTTGCACACTGTTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYYEEKE*LHTVGL Trigger: CAAACCAACAGTGTGCAAGCATTCCTTTTCTTCATA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATCTTAGGGTCACTTTCTaGAAAGAATCTCTTATGTTC | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYLRVTF*KESLMF Trigger: GAACATAAGAGATTCTTTCCAGAAAGTGACCCTAAG...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| 3UTR CAA 72 bp | AAGTATGAAGAAAAGGAATGCTTGCACACTGTTGGTTaGAATGTGAATGAGGAGAGTCACTATGAAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: KYEEKECLHTVG*NVNEESHYEKQ Trigger: TTGTTTTTCATAGTGACTCTCCTCATTCACATTCAAACCAACAGTGTGCAAGCATTCCTTTTCTTCATACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATCTCATCCAGTCAGAATaGCTATTGTTAAAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYLIQSE*LLLKSQ Trigger: TTGACTTTTTAACAATAGGCATTCTGACTGGATGAG...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATATAGGTGGAAAACTTTaGCAGATTCTCTACATTTGT | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYIGGKL*QILYIC Trigger: ACAAATGTAGAGAATCTGGCAAAGTTTTCCACCTAT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282869.11 ENST00000620222.4 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTGCTTCTATGTTGTTTaGAACACTCTTCACAATTAC | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYCFYVV*NTLHNY Trigger: GTAATTGTGAAGAGTGTTGCAAACAACATAGAAGCA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATATGGGAGAAAATATTTaGAAATCATACGTGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: AGVDGYFICPDVINTYSYMGENI*KSYVGQ Trigger: TTGTCCCACGTATGATTTGCAAATATTTTCTCCCAT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAGCCCCTGCCTGGCCTaGCAGATAATTATCATAGCT | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYSPCLA*QIIIIA Trigger: AGCTATGATAATTATCTGCAAGGCCAGGCAGGGGCT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAGGAATGCTTATATGTaGTGGGAATCAGGAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYRNAYM*WESGGR Trigger: CCGGCCTCCTGATTCCCACAACATATAAGCATTCCT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATCAGATGCGGGCTAGGTaGCAGAGAAAAAGGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYQMRAR*QRKRNA Trigger: AGCATTCCTTTTTCTCTGCAACCTAGCCCGCATCTG...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTTTGCCACAATATATTaGCACTCCAGCCTGGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYFATIY*HSSLGN Trigger: ATTGCCCAGGCTGGAGTGCAAATATATTGTGGCAAA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATACTGATAAGGAGAACTaGTTTTTCTCATCCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYTDKEN*FFSSLL Trigger: GAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTTGCACACTGTTGGTTaGAATGTGAATGAGGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYLHTVG*NVNEES Trigger: ACTCTCCTCATTCACATTCAAACCAACAGTGTGCAA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATTGGTCAGGAAAGGACTaGTTTTCCCTTTACTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYWSGKD*FSLYLF Trigger: AAACAAGTAAAGGGAAAACAAGTCCTTTCCTGACCA...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATGTTTTACAACAGGATTaGCAACATGAGCCTACCTTA | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYVLQQD*QHEPTL Trigger: TAAGGTAGGCTCATGTTGCAAATCCTGTTGTAAAAC...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATGAAGAAAAGGAATGCTaGCACACTGTTGGTTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYEEKEC*HTVGLN Trigger: ATTCAAACCAACAGTGTGCAAGCATTCCTTTTCTTC...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTTGATGGATATTTCATTTGCCCTGATGTGATTAATACCTATTCATATAATGGGAGAAAATATTaGCAAATCATACGTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: AGVDGYFICPDVINTYSYNGRKY*QIIRGT Trigger: TGTCCCACGTATGATTTGCAAATATTTTCTCCCATT...ATATGAATAGGTATTAATCACATCAGGGCAAATGAAATATCCATCAACTCCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS CCA 72 bp | GAGATCACTGGGTGCAACAGGAAGGTTTTATTTAGGTaGCCACTGGCCCAGCGGATTAACATCCAAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EITGCNRKVLFR*PLAQRINIQRL Trigger: CAGCCTTTGGATGTTAATCCGCTGGGCCAGTGGCCACCTAAATAAAACCTTCCTGTTGCACCCAGTGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS CAA 72 bp | CGGGCTAGGTTGCAGAGAAAAAGGAATGCTTATATGTaGTGGGAATCAGGAGGCCGGAGAGATCACTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RARLQRKRNAYM*WESGGRRDHWV Trigger: CACCCAGTGATCTCTCCGGCCTCCTGATTCCCACAACATATAAGCATTCCTTTTTCTCTGCAACCTAGCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS CCA 72 bp | GCTAGGTTGCAGAGAAAAAGGAATGCTTATATGTTGTaGGAATCAGGAGGCCGGAGAGATCACTGGGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: ARLQRKRNAYML*ESGGRRDHWVQ Trigger: TTGCACCCAGTGATCTCTCCGGCCTCCTGATTCCCACAACATATAAGCATTCCTTTTTCTCTGCAACCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282869.11 |
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| CDS TCA 72 bp | CAAGAAAATTTGCAGGCCAGAAGGGAACTAACTGTGTaGCATTGTCCAAGTCCTGAAGAAAATAGCTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: QENLQARRELTV*HCPSPEENSCQ Trigger: TTGACAGCTATTTTCTTCAGGACTTGGACAATGTCACACAGTTAGTTCCCTTCTGGCCTGCAAATTTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487644.1 |
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