RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF114 (Homo sapiens)

Ensembl gene IDs: ENSG00000178150

Ensembl transcript IDs: ENST00000315849.5, ENST00000594024.5, ENST00000595408.5, ENST00000595607.6, ENST00000598898.1, ENST00000600687.5, ENST00000601320.1

Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGAGTTTCTCTCCAGGGTaGGAACAAATGTCTACTCAA +
Preference number: 2 (lower is better)
Translates to: TASSTSQVYTILLPQPPKSFSPG*EQMSTQ
Trigger: TTGAGTAGACATTTGTTCTCACCCTGGAGAGAAACT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
3UTR-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGAATTTGAGACCACGCTaGAGGCTTTGTCATATTCCT +
Preference number: 2 (lower is better)
Translates to: TASSTSQVYTILLPQPPKNLRPR*RLCHIP
Trigger: AGGAATATGACAAAGCCTTCAGCGTGGTCTCAAATT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
3UTR-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCAATTTGAGACCACGCTaGAGGCTTTGTCATATTCCT +
Preference number: 2 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTNLRPR*RLCHIP
Trigger: AGGAATATGACAAAGCCTTCAGCGTGGTCTCAAATT...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGCCAACGCGCCTCCTTaGGGGCTCCGGAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPANAPP*GLRRLR
Trigger: CCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCATCCCCCAGGCTGGAGTaGAGTGGCTCCATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPSPRLE*SGSISA
Trigger: AGCCGAGATGGAGCCACTGCACTCCAGCCTGGGGGA...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTCCCCCAGGCTGGAGTaGAGTGGCTCCATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKSPRLE*SGSISA
Trigger: AGCCGAGATGGAGCCACTGCACTCCAGCCTGGGGGA...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGGGAAGCGCGCTCTCTaGGCAGCCAACGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTGKRAL*AANAPP
Trigger: AGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGAGACTCCGGCCGCTTaGTGGCTTCCTGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKETPAA*WLPAFP
Trigger: GGGAAATGCAGGAAGCCAGCAAGCGGCCGGAGTCTC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGAGATGTCTCTGTCGGTaGCGCAGCCCAAAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKRCLCR*RSPKAR
Trigger: GCGCGCTTTTGGGCTGCGCCACCGACAGAGACATCT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCCCTAGGCTCTCCAGCTaGGAAGCGCGCTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTPRLSS*EARSLR
Trigger: GCGCAGAGAGCGCGCTTCCCAGCTGGAGAGCCTAGG...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAATCCCCAGGCACTCCTaGTCCAAGCAGGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPIPRHS*SKQETP
Trigger: TGGGGTTTCCTGCTTGGATCAGGAGTGCCTGGGGAT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGGAGCGTCTCGGAGCTaGACCAGGATGGGGATCAAA +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKGASRS*TRMGIK
Trigger: TTTGATCCCCATCCTGGTGCAGCTCCGAGACGCTCC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGGAGCGTCTCGGAGCTaGACCAGGATGGGGATCAAA +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPGASRS*TRMGIK
Trigger: TTTGATCCCCATCCTGGTGCAGCTCCGAGACGCTCC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGGAGCTGCACCAGGATaGGGATCAAATCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKGAAPG*GSNPQA
Trigger: TGCCTGGGGATTTGATCCCCATCCTGGTGCAGCTCC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCACCAAATGGATTCCGCTaGTGCCTGTTGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPPNGFR*CLLAPV
Trigger: TACGGGGGCCAACAGGCACCAGCGGAATCCATTTGG...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCCAAATGGATTCCGCTaGTGCCTGTTGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKPNGFR*CLLAPV
Trigger: TACGGGGGCCAACAGGCACCAGCGGAATCCATTTGG...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAACTCCGGCCGCTTGCTaGCTTCCTGCATTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPTPAAC*LPAFPK
Trigger: CTTGGGAAATGCAGGAAGCCAGCAAGCGGCCGGAGT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCATATTTGTCACCAACGTaGCGGCCAGTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPYLSPT*RPVLAS
Trigger: GGAAGCCAGGACTGGCCGTCACGTTGGTGACAAATA...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCCACACGGAACCCACTaGATGTTCCACCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKPHGTH*MFHPKT
Trigger: AGTCTTGGGGTGGAACATTCAGTGGGTTCCGTGTGG...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAATGGATTCCGCTGGTaGCTGTTGGCCCCCGTATCA +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPNGFRW*LLAPVS
Trigger: TGATACGGGGGCCAACAGGCACCAGCGGAATCCATT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGAATGGATTCCGCTGGTaGCTGTTGGCCCCCGTATCA +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKNGFRW*LLAPVS
Trigger: TGATACGGGGGCCAACAGGCACCAGCGGAATCCATT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCAGATGTCTCTGTCGGTaGCGCAGCCCAAAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTRCLCR*RSPKAR
Trigger: GCGCGCTTTTGGGCTGCGCCACCGACAGAGACATCT...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCCGTGACGGCCAGTCCTaGCTTCCCCGTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTRDGQS*LPRVSF
Trigger: GAAGGAAACACGGGGAAGCCAGGACTGGCCGTCACG...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCATCCCCAGGCACTCCTaGTCCAAGCAGGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTIPRHS*SKQETP
Trigger: TGGGGTTTCCTGCTTGGATCAGGAGTGCCTGGGGAT...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGGAAGAATATCCGGCTaGGGGGTTGCGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPGRISG*GVASLV
Trigger: AACCAAAGACGCAACCCCTCAGCCGGATATTCTTCC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCATATGGAATCTCCCTGTaGAGGCACAAGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPYGISL*RHKPAG
Trigger: ACCTGCAGGCTTGTGCCTTCACAGGGAGATTCCATA...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCACCCCTCAGTATATGCTaGCCAGACTCGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPPLSIC*PDSSRT
Trigger: AGTTCGAGACGAGTCTGGGCAGCATATACTGAGGGG...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGGAGCTGCACCAGGATaGGGATCAAATCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTGAAPG*GSNPQA
Trigger: TGCCTGGGGATTTGATCCCCATCCTGGTGCAGCTCC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTCCGCTGGTGCCTGTTaGCCCCCGTATCAATTTCAT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKSAGAC*PPYQFH
Trigger: ATGAAATTGATACGGGGGCCAACAGGCACCAGCGGA...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCGGAATTTGGAGCGTTaGCAGAGGTTGCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKRNLER*QRLPQF
Trigger: AAACTGGGGCAACCTCTGCCAACGCTCCAAATTCCG...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGATCCGGCTGAGGGGTTaGGTCTTTGGTTTTACATGG +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKIRLRG*VFGFTW
Trigger: CCATGTAAAACCAAAGACGCAACCCCTCAGCCGGAT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGACCATGAGTGTTGTGTaGCCTAAGGGATCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKTMSVV*PKGSVF
Trigger: GAAGACGGATCCCTTAGGGCACACAACACTCATGGT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCGTTGGCAGAGGTTaGCCCAGTTTGACAATCCTT +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPSVGRG*PSLTIL
Trigger: AAGGATTGTCAAACTGGGGCAACCTCTGCCAACGCT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGAGCGTTGGCAGAGGTTaGCCCAGTTTGACAATCCTT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKSVGRG*PSLTIL
Trigger: AAGGATTGTCAAACTGGGGCAACCTCTGCCAACGCT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCACGCTTGCTGGCTTCCTaGATTTCCCAAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPRLLAS*ISQGKK
Trigger: CTTCTTTCCTTGGGAAATGCAGGAAGCCAGCAAGCG...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGAGGGGTTGCGTCTTTaGTTTTACATGGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKEGLRL*FYMELP
Trigger: GGGCAACTCCATGTAAAACCAAAGACGCAACCCCTC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGAGGGGTTGCGTCTTTaGTTTTACATGGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPEGLRL*FYMELP
Trigger: GGGCAACTCCATGTAAAACCAAAGACGCAACCCCTC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGTGGTTCCTCTGTTTTaGGGCATCTCCAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKVVPLF*GISSLL
Trigger: GAGAAGACTGGAGATGCCCCAAAACAGAGGAACCAC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGTGGTTCCTCTGTTTTaGGGCATCTCCAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPVVPLF*GISSLL
Trigger: GAGAAGACTGGAGATGCCCCAAAACAGAGGAACCAC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGGAAGAATATCCGGCTaGGGGGTTGCGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTGRISG*GVASLV
Trigger: AACCAAAGACGCAACCCCTCAGCCGGATATTCTTCC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTATGGAATCTCCCTGTaGAGGCACAAGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTYGISL*RHKPAG
Trigger: ACCTGCAGGCTTGTGCCTTCACAGGGAGATTCCATA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAATTTTCTCTCGACCATaGGTGTTGTGTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPIFSRP*VLCALR
Trigger: CCTTAGGGCACACAACACTCATGGTCGAGAGAAAAT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGAGGTTGCCCCAGTTTaGCAATCCTTCTTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPEVAPV*QSFLFV
Trigger: GACAAACAAGAAGGATTGTCAAACTGGGGCAACCTC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGCAATGACTCTTGTGTaGACCGGAATTTGGAGCGTT +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPAMTLV*TGIWSV
Trigger: AACGCTCCAAATTCCGGTTCACACAAGAGTCATTGC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTTCTCTCCAGTGCAATaGCTCTTGTGTGAACCGGAA +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKFSPVQ*LLCEPE
Trigger: TTCCGGTTCACACAAGAGTCATTGCACTGGAGAGAA...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTGGGTGCAAGTGGGCTaGGTTGGAAAAGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTWVQVG*VGKESQ
Trigger: CTGACTCTCTTTTCCAACTCAGCCCACTTGCACCCA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTCTCTTAATGTGGAGTaGTGGGAACTGATGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKSLNVE*WELMLV
Trigger: CACGAGCATCAGTTCCCAGCACTCCACATTAAGAGA...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCATCTCTTAATGTGGAGTaGTGGGAACTGATGCTCGTG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPSLNVE*WELMLV
Trigger: CACGAGCATCAGTTCCCAGCACTCCACATTAAGAGA...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGAAGGTCACCGAGTCCTaGGACATATTTGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKKVTES*DIFVTN
Trigger: GTTGGTGACAAATATGTCCCAGGACTCGGTGACCTT...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCTTAATGTGGAGTGCTaGGAACTGATGCTCGTGAGA +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKLNVEC*ELMLVR
Trigger: TCTCACGAGCATCAGTTCCCAGCACTCCACATTAAG...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCCGGAATTTGGAGCGTTaGCAGAGGTTGCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTRNLER*QRLPQF
Trigger: AAACTGGGGCAACCTCTGCCAACGCTCCAAATTCCG...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCACCTCCCTTCAGGATGTaGATTCACATGCAACATGAG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPPPFRM*IHMQHE
Trigger: CTCATGTTGCATGTGAATCCACATCCTGAAGGGAGG...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCTGCATGGCGTGAATTaGGTTATTTCTGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKLHGVN*VISGGV
Trigger: AACACCTCCAGAAATAACTCAATTCACGCCATGCAG...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCATCCGGCTGAGGGGTTaGGTCTTTGGTTTTACATGG +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTIRLRG*VFGFTW
Trigger: CCATGTAAAACCAAAGACGCAACCCCTCAGCCGGAT...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTTTCTCAGGGGCAACTaGAGGTGGCTTCACATTATT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKFLRGN*RWLHII
Trigger: AATAATGTGAAGCCACCTGCAGTTGCCCCTGAGAAA...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGACTGCCAGTCCATGTaGTTGATTTCAGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKDCQSM*LISALF
Trigger: AAACAGAGCTGAAATCAAGCACATGGACTGGCAGTC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCACCATGAGTGTTGTGTaGCCTAAGGGATCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTTMSVV*PKGSVF
Trigger: GAAGACGGATCCCTTAGGGCACACAACACTCATGGT...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGAAAGCTTTTCCAAATaGATTCCGCTGGTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPESFSK*IPLVPV
Trigger: AACAGGCACCAGCGGAATCCATTTGGAAAAGCTTTC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGAGGTTGCCCCAGTTTaGCAATCCTTCTTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTEVAPV*QSFLFV
Trigger: GACAAACAAGAAGGATTGTCAAACTGGGGCAACCTC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGCAATGACTCTTGTGTaGACCGGAATTTGGAGCGTT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTAMTLV*TGIWSV
Trigger: AACGCTCCAAATTCCGGTTCACACAAGAGTCATTGC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTTCTCTCCAGTGCAATaGCTCTTGTGTGAACCGGAA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTFSPVQ*LLCEPE
Trigger: TTCCGGTTCACACAAGAGTCATTGCACTGGAGAGAA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTTTCTCTCCAGGGTaGGAACAAATGTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPSFSPG*EQMSTQ
Trigger: TTGAGTAGACATTTGTTCTCACCCTGGAGAGAAACT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCACATTATTCACCCCCTaGCTGTGTGGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTTLFTP*LCGSSV
Trigger: AACAGAGGAACCACACAGGCAGGGGGTGAATAATGT...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGCACAGTGTTCTGACTaGCAGTCCATGTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTAQCSD*QSMCLI
Trigger: AATCAAGCACATGGACTGGCAGTCAGAACACTGTGC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCACTTCTTGTTTGTCTCTaGGGTATACAACTGCATCTG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPLLVCL*GIQLHL
Trigger: CAGATGCAGTTGTATACCGCAGAGACAAACAAGAAG...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGGATGTGGATTCACATaGAACATGAGTGGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKGCGFT*NMSGKC
Trigger: ACACTTACCACTCATGTTGCATGTGAATCCACATCC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCAAGGTCACCGAGTCCTaGGACATATTTGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTKVTES*DIFVTN
Trigger: GTTGGTGACAAATATGTCCCAGGACTCGGTGACCTT...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCCTTAATGTGGAGTGCTaGGAACTGATGCTCGTGAGA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTLNVEC*ELMLVR
Trigger: TCTCACGAGCATCAGTTCCCAGCACTCCACATTAAG...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGGATACATTGTCTTATaGAATCTCCCTGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPGYIVL*NLPVKA
Trigger: TGCCTTCACAGGGAGATTCCATAAGACAATGTATCC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGAATTGAGTTATTTCTaGAGGTGTTCTCGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPELSYF*RCSRTE
Trigger: CTCAGTGCGAGAACACCTCCAGAAATAACTCAATTC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCCCTCCCTTCAGGATGTaGATTCACATGCAACATGAG +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTPPFRM*IHMQHE
Trigger: CTCATGTTGCATGTGAATCCACATCCTGAAGGGAGG...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCACTTGGGTGCAAGTaGGCTGAGTTGGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTSLGCK*AELEKR
Trigger: TCTCTTTTCCAACTCAGCCCACTTGCACCCAAGTGA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGAGGTGTTCTCGCACTaGGTAAAATCATACATTTTC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKEVFSH*VKSYIF
Trigger: GAAAATGTATGATTTTACTCAGTGCGAGAACACCTC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAGAGGTGTTCTCGCACTaGGTAAAATCATACATTTTC +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPEVFSH*VKSYIF
Trigger: GAAAATGTATGATTTTACTCAGTGCGAGAACACCTC...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGACTGCCAGTCCATGTaGTTGATTTCAGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTDCQSM*LISALF
Trigger: AAACAGAGCTGAAATCAAGCACATGGACTGGCAGTC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGTTTATTCACTTGGGTaGAAGTGGGCTGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTVYSLG*KWAELE
Trigger: TTCCAACTCAGCCCACTTGCACCCAAGTGAATAAAC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGAAAGCTTTTCCAAATaGATTCCGCTGGTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTESFSK*IPLVPV
Trigger: AACAGGCACCAGCGGAATCCATTTGGAAAAGCTTTC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCATGGTTCCTCATTTCATaGTCTTCACAAATGCTAACA +
Preference number: 4 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPWFLIS*SSQMLT
Trigger: TGTTAGCATTTGTGAAGATCATGAAATGAGGAACCA...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTGCCCAATCTATGAATaGCAAGTTCCTAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKCPIYE*QVPRIF
Trigger: GAAAATTCTAGGAACTTGGCATTCATAGATTGGGCA...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGGATGTGGATTCACATaGAACATGAGTGGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTGCGFT*NMSGKC
Trigger: ACACTTACCACTCATGTTGCATGTGAATCCACATCC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGTCTTTGGTTTTACATaGAGTTGCCCAATCTATGAA +
Preference number: 4 (lower is better)
Translates to: TASSTSQVYTILLPQPPKVFGFT*SCPIYE
Trigger: TTCATAGATTGGGCAACTCCATGTAAAACCAAAGAC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGAATTGAGTTATTTCTaGAGGTGTTCTCGCACTGAG +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTELSYF*RCSRTE
Trigger: CTCAGTGCGAGAACACCTCCAGAAATAACTCAATTC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGGTTTTACATGGAGTTaGCCAATCTATGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTGFTWS*PIYECQ
Trigger: TTGGCATTCATAGATTGGGCAACTCCATGTAAAACC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTGGTTCCTCATTTCATaGTCTTCACAAATGCTAACA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTWFLIS*SSQMLT
Trigger: TGTTAGCATTTGTGAAGATCATGAAATGAGGAACCA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR GCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTGCCCAATCTATGAATaGCAAGTTCCTAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTCPIYE*QVPRIF
Trigger: GAAAATTCTAGGAACTTGGCATTCATAGATTGGGCA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCGTCTTTGGTTTTACATaGAGTTGCCCAATCTATGAA +
Preference number: 4 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTVFGFT*SCPIYE
Trigger: TTCATAGATTGGGCAACTCCATGTAAAACCAAAGAC...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS GCA 90 bp CCCGCGCCACCGTTCCTAGGCTCTCCAGCTGGGAAGCGCGCTCTCTaGGCAGCCAACGCGCCTCCTTGCGGGCTCCGGAGACTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: PAPPFLGSPAGKRAL*AANAPPCGLRRLRP
Trigger: CGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGAGCCTAGGAACGGTGGCGCGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595607.6
ENST00000600687.5
CDS CCA 90 bp CTCGCTGTCGCCTCCGCCCGCGCCACCGTTCCTAGGCTCTCCAGCTaGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCCTTGCGGGCT +
Preference number: 5 (lower is better)
Translates to: LAVASARATVPRLSS*EARSLRSQRASLRA
Trigger: AGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGAGCCTAGGAACGGTGGCGCGGGCGGAGGCGACAGCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595607.6
ENST00000600687.5
CDS GCA 90 bp TCTCCAGCTGGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCCTTaGGGGCTCCGGAGACTCCGGCCGCTTGCTGGCTTCCTACCCTTG +
Preference number: 5 (lower is better)
Translates to: SPAGKRALCAANAPP*GLRRLRPLAGFLPL
Trigger: CAAGGGTAGGAAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600687.5
CDS GCA 90 bp TCTCCAGCTGGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCCTTaGGGGCTCCGGAGACTCCGGCCGCTTGCTGGCTTCCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: SPAGKRALCAANAPP*GLRRLRPLAGFLHF
Trigger: GAAATGCAGGAAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS CCA 90 bp GCAGAGTCCCCAGGCACTCCTGATCCAAGCAGGAAACCCCAGCCTTaGGTCCTCGCTGTCGCCTCCGCCCGCGCCACCGTTCCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: AESPGTPDPSRKPQP*VLAVASARATVPRL
Trigger: GAGCCTAGGAACGGTGGCGCGGGCGGAGGCGACAGCGAGGACCCAAGGCTGGGGTTTCCTGCTTGGATCAGGAGTGCCTGGGGACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600687.5
CDS CCA 90 bp AGGCAGAGTCTTCCACTAGCTCCGGCTTCCAGATGTCTCTGTCGGTaGCGCAGCCCAAAAGCGCGCGCAGCCCAGGAGCGTCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: RQSLPLAPASRCLCR*RSPKARAAQERLGA
Trigger: AGCTCCGAGACGCTCCTGGGCTGCGCGCGCTTTTGGGCTGCGCCACCGACAGAGACATCTGGAAGCCGGAGCTAGTGGAAGACTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315849.5
ENST00000595408.5
ENST00000595607.6
ENST00000601320.1
CDS CCA 90 bp ATCAAATCCCCAGGCACTCCTGATCCAAGCAGGAAACCCCAGCCTTaGGTCCTCGCTGTCGCCTCCGCCCGCGCCACCGTTCCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: IKSPGTPDPSRKPQP*VLAVASARATVPRL
Trigger: GAGCCTAGGAACGGTGGCGCGGGCGGAGGCGACAGCGAGGACCCAAGGCTGGGGTTTCCTGCTTGGATCAGGAGTGCCTGGGGATTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS CCA 90 bp AGGCAGAGTCTTCCACTAGCTCCGGCTTCCAGATGTCTCTGTCGGTaGCGCAGCCCAAAAGCGCGCGCAGCCCAGGAGCGTCTCGGAGTC +
Preference number: 5 (lower is better)
Translates to: RQSLPLAPASRCLCR*RSPKARAAQERLGV
Trigger: GACTCCGAGACGCTCCTGGGCTGCGCGCGCTTTTGGGCTGCGCCACCGACAGAGACATCTGGAAGCCGGAGCTAGTGGAAGACTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594024.5
CDS-3UTR CAA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCCAACGCGCCTCCTaGCGGGCTCCGGAGACTCCG +
Preference number: 5 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPSQRAS*RAPETP
Trigger: CGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCAGGAAACCCCAGCCTaGGGTCCTCGCTGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: TASSTSQVYTILLPQPPKQETPA*GPRCRL
Trigger: GAGGCGACAGCGAGGACCCAAGGCTGGGGTTTCCTG...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS TCA 90 bp CGTCTGCGAAGGTCACCGAGTCCTGGGACATATTTGTCACCAACGTaGCGGCCAGTCCTGGCTTCCCCGTGTTTCCTTCAAGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RLRRSPSPGTYLSPT*RPVLASPCFLQGGR
Trigger: CCTGCCTCCTTGAAGGAAACACGGGGAAGCCAGGACTGGCCGTCACGTTGGTGACAAATATGTCCCAGGACTCGGTGACCTTCGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315849.5
ENST00000595607.6
ENST00000600687.5
CDS TCA 90 bp GCCTGGGCAACAGAGCAAGACCCTGGGACATATTTGTCACCAACGTaGCGGCCAGTCCTGGCTTCCCCGTGTTTCCTTCAAGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: AWATEQDPGTYLSPT*RPVLASPCFLQGGR
Trigger: CCTGCCTCCTTGAAGGAAACACGGGGAAGCCAGGACTGGCCGTCACGTTGGTGACAAATATGTCCCAGGGTCTTGCTCTGTTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594024.5
ENST00000595408.5
ENST00000601320.1
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGGAGACTCCGGCCGCTaGCTGGCTTCCTGCATTTCC +
Preference number: 5 (lower is better)
Translates to: TASSTSQVYTILLPQPPKGDSGR*LASCIS
Trigger: GGAAATGCAGGAAGCCAGCAAGCGGCCGGAGTCTCC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGCCGGAATTTGGAGCGTaGGCAGAGGTTGCCCCAGTT +
Preference number: 5 (lower is better)
Translates to: TASSTSQVYTILLPQPPKPEFGA*AEVAPV
Trigger: AACTGGGGCAACCTCTGCCAACGCTCCAAATTCCGG...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGAGCGTTGGCAGAGGTaGCCCCAGTTTGACAATCCT +
Preference number: 5 (lower is better)
Translates to: TASSTSQVYTILLPQPPKERWQR*PQFDNP
Trigger: AGGATTGTCAAACTGGGGCAACCTCTGCCAACGCTC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CAA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCATGTGGTTCCTCTGTTTaGGGGCATCTCCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPCGSSV*GHLQSS
Trigger: AGAAGACTGGAGATGCCCCAAAACAGAGGAACCACA...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGTGTGGTTCCTCTGTTTaGGGGCATCTCCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TASSTSQVYTILLPQPPKCGSSV*GHLQSS
Trigger: AGAAGACTGGAGATGCCCCAAAACAGAGGAACCACA...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CAA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTTCCGCTGGTGCCTGTaGGCCCCCGTATCAATTTCA +
Preference number: 5 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTFRWCL*APVSIS
Trigger: TGAAATTGATACGGGGGCCAACAGGCACCAGCGGAA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CAA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCACCACCTAAACAGGCTTaGTGTAAGCAACAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPPPKQA*CKQQRL
Trigger: CAGCCTTTGTTGCTTACACAAAGCCTGTTTAGGTGG...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS-3UTR CAA 90 bp TTAGTAGAGACGGGGTATCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTATCCGGCTGAGGGGTaGCGTCTTTGGTTTTACATG +
Preference number: 5 (lower is better)
Translates to: LVETGYHRVSQDGLDLLTYPAEG*RLWFYM
Trigger: CATGTAAAACCAAAGACGCAACCCCTCAGCCGGATA...GGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGATACCCCGTCTCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CAA 90 bp TCACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGAGGTTGCCCCAGTTaGACAATCCTTCTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: SLQAPPPRFTPFSYLSLPRGCPS*TILLVC
Trigger: ACAAACAAGAAGGATTGTCAAACTGGGGCAACCTCT...TGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCAGGTTTACACCATTCTCCTACCTCAGCCTCCCAAGGACAATCCTTCTTGTTaGTCTCTGCGGTATACAACT +
Preference number: 5 (lower is better)
Translates to: TASSTSQVYTILLPQPPKDNPSC*SLRYTT
Trigger: AGTTGTATACCGCAGAGACAAACAAGAAGGATTGTC...CTTGGGAGGCTGAGGTAGGAGAATGGTGTAAACCTGGGAGGTGGAGCTTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315849.5
ENST00000595607.6
CDS GCA 90 bp ATCTTCACAAATGCTAACAGGAGATTCATCTTTCTCAGGGGCAACTaGAGGTGGCTTCACATTATTCACCCCCTGCCTGTGTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: IFTNANRRFIFLRGN*RWLHIIHPLPVWFL
Trigger: GAGGAACCACACAGGCAGGGGGTGAATAATGTGAAGCCACCTGCAGTTGCCCCTGAGAAAGATGAATCTCCTGTTAGCATTTGTGAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315849.5
ENST00000595607.6
ENST00000600687.5
CDS CCA 90 bp ACAAATGCTAACAGGAGATTCATCTTTCTCAGGGGCAACTGCAGGTaGCTTCACATTATTCACCCCCTGCCTGTGTGGTTCCTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: TNANRRFIFLRGNCR*LHIIHPLPVWFLCF
Trigger: AAAACAGAGGAACCACACAGGCAGGGGGTGAATAATGTGAAGCCACCTGCAGTTGCCCCTGAGAAAGATGAATCTCCTGTTAGCATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315849.5
ENST00000595607.6
ENST00000600687.5
CDS CCA 72 bp GCCTCCGCCCGCGCCACCGTTCCTAGGCTCTCCAGCTaGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: ASARATVPRLSS*EARSLRSQRAS
Trigger: GGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGAGCCTAGGAACGGTGGCGCGGGCGGAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595607.6
ENST00000600687.5
CDS GCA 72 bp GGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCCTTaGGGGCTCCGGAGACTCCGGCCGCTTGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: GKRALCAANAPP*GLRRLRPLAGF
Trigger: GAAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595607.6
ENST00000600687.5
CDS CAA 72 bp TGGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCCTaGCGGGCTCCGGAGACTCCGGCCGCTTGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: WEARSLRSQRAS*RAPETPAACWL
Trigger: AAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595607.6
ENST00000600687.5
CDS CAA 90 bp CTCTCCAGCTGGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCCTaGCGGGCTCCGGAGACTCCGGCCGCTTGCTGGCTTCCTACCCTT +
Preference number: 6 (lower is better)
Translates to: LSSWEARSLRSQRAS*RAPETPAACWLPTL
Trigger: AAGGGTAGGAAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600687.5
CDS GCA 72 bp CCGTTCCTAGGCTCTCCAGCTGGGAAGCGCGCTCTCTaGGCAGCCAACGCGCCTCCTTGCGGGCTCCGGAGA +
Preference number: 6 (lower is better)
Translates to: PFLGSPAGKRAL*AANAPPCGLRR
Trigger: TCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGAGCCTAGGAACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595607.6
ENST00000600687.5
CDS CAA 90 bp CTCTCCAGCTGGGAAGCGCGCTCTCTGCGCAGCCAACGCGCCTCCTaGCGGGCTCCGGAGACTCCGGCCGCTTGCTGGCTTCCTGCATTT +
Preference number: 6 (lower is better)
Translates to: LSSWEARSLRSQRAS*RAPETPAACWLPAF
Trigger: AAATGCAGGAAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGTTGGCTGCGCAGAGAGCGCGCTTCCCAGCTGGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS TCA 72 bp GCAGCCCAGGAGCGTCTCGGAGTCCCCAGGCACTCCTaGTCCAAGCAGGAAACCCCAGCCTTGGGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: AAQERLGVPRHS*SKQETPALGPR
Trigger: GCGAGGACCCAAGGCTGGGGTTTCCTGCTTGGATCAGGAGTGCCTGGGGACTCCGAGACGCTCCTGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594024.5
CDS CCA 72 bp CTTCCACTAGCTCCGGCTTCCAGATGTCTCTGTCGGTaGCGCAGCCCAAAAGCGCGCGCAGCCCAGGAGCGT +
Preference number: 6 (lower is better)
Translates to: LPLAPASRCLCR*RSPKARAAQER
Trigger: ACGCTCCTGGGCTGCGCGCGCTTTTGGGCTGCGCCACCGACAGAGACATCTGGAAGCCGGAGCTAGTGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315849.5
ENST00000594024.5
ENST00000595408.5
ENST00000595607.6
ENST00000601320.1
CDS GCA 72 bp CGCGCCTCCTTGCGGGCTCCGGAGACTCCGGCCGCTTaGTGGCTTCCTGCATTTCCCAAGGAAAGAAGGCTT +
Preference number: 6 (lower is better)
Translates to: RASLRAPETPAA*WLPAFPKERRL
Trigger: AAGCCTTCTTTCCTTGGGAAATGCAGGAAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS CAA 72 bp ACGCGCCTCCTTGCGGGCTCCGGAGACTCCGGCCGCTaGCTGGCTTCCTGCATTTCCCAAGGAAAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: TRLLAGSGDSGR*LASCISQGKKA
Trigger: AGCCTTCTTTCCTTGGGAAATGCAGGAAGCCAGCAAGCGGCCGGAGTCTCCGGAGCCCGCAAGGAGGCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS TCA 72 bp AGGTCACCGAGTCCTGGGACATATTTGTCACCAACGTaGCGGCCAGTCCTGGCTTCCCCGTGTTTCCTTCAA +
Preference number: 6 (lower is better)
Translates to: RSPSPGTYLSPT*RPVLASPCFLQ
Trigger: TTGAAGGAAACACGGGGAAGCCAGGACTGGCCGTCACGTTGGTGACAAATATGTCCCAGGACTCGGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315849.5
ENST00000595607.6
ENST00000600687.5
CDS GCA 72 bp AGGCCGCCAGGAAGGACCGACTACAGAGATTCGTCCTaGCCAGACATTTTGTACTCGCTTCTTGACCCCTTC +
Preference number: 6 (lower is better)
Translates to: RPPGRTDYRDSS*PDILYSLLDPF
Trigger: GAAGGGGTCAAGAAGCGAGTACAAAATGTCTGGGCAGGACGAATCTCTGTAGTCGGTCCTTCCTGGCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601320.1
CDS TCA 72 bp ACAGAGCAAGACCCTGGGACATATTTGTCACCAACGTaGCGGCCAGTCCTGGCTTCCCCGTGTTTCCTTCAA +
Preference number: 6 (lower is better)
Translates to: TEQDPGTYLSPT*RPVLASPCFLQ
Trigger: TTGAAGGAAACACGGGGAAGCCAGGACTGGCCGTCACGTTGGTGACAAATATGTCCCAGGGTCTTGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594024.5
ENST00000595408.5
ENST00000601320.1
CDS CAA 90 bp CCTGGGTGTCACGCGTGTCCGTATAGAAGACCACCTAAACAGGCTTaGTGTAAGCAACAAAGGCTGTTTATTCACTTGGGTGCAAGTGGG +
Preference number: 6 (lower is better)
Translates to: PGCHACPYRRPPKQA*CKQQRLFIHLGASG
Trigger: CCCACTTGCACCCAAGTGAATAAACAGCCTTTGTTGCTTACACAAAGCCTGTTTAGGTGGTCTTCTATACGGACACGCGTGACACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6
CDS GCA 72 bp AATGCTAACAGGAGATTCATCTTTCTCAGGGGCAACTaGAGGTGGCTTCACATTATTCACCCCCTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: NANRRFIFLRGN*RWLHIIHPLPV
Trigger: CACAGGCAGGGGGTGAATAATGTGAAGCCACCTGCAGTTGCCCCTGAGAAAGATGAATCTCCTGTTAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315849.5
ENST00000595607.6
ENST00000600687.5
CDS CCA 72 bp CGAAGGTCACCGAGTCCTAAAATAACACATGCAGTTTaGCTCGGAGGGGTGTCCTGTTATCAGTTTGAACTG +
Preference number: 6 (lower is better)
Translates to: RRSPSPKITHAV*LGGVSCYQFEL
Trigger: CAGTTCAAACTGATAACAGGACACCCCTCCGAGCCAAACTGCATGTGTTATTTTAGGACTCGGTGACCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598898.1
CDS GCA 72 bp TCTTCACGGAAAGCTTTTCCAAATGGATTCCGCTGGTaGCTGTTGGCCCCCGTATCAATTTCATCACGTATA +
Preference number: 6 (lower is better)
Translates to: SSRKAFPNGFRW*LLAPVSISSRI
Trigger: TATACGTGATGAAATTGATACGGGGGCCAACAGGCACCAGCGGAATCCATTTGGAAAAGCTTTCCGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315849.5
ENST00000595607.6
ENST00000600687.5
CDS CCA 72 bp AATATCCGGCTGAGGGGTTGCGTCTTTGGTTTTACATaGAGTTGCCCAATCTATGAATGCCAAGTTCCTAGA +
Preference number: 6 (lower is better)
Translates to: NIRLRGCVFGFT*SCPIYECQVPR
Trigger: TCTAGGAACTTGGCATTCATAGATTGGGCAACTCCATGTAAAACCAAAGACGCAACCCCTCAGCCGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315849.5
ENST00000594024.5
ENST00000595408.5
ENST00000595607.6
ENST00000600687.5
CDS CAA 72 bp CACGCGTGTCCGTATAGAAGACCACCTAAACAGGCTTaGTGTAAGCAACAAAGGCTGTTTATTCACTTGGGT +
Preference number: 6 (lower is better)
Translates to: HACPYRRPPKQA*CKQQRLFIHLG
Trigger: ACCCAAGTGAATAAACAGCCTTTGTTGCTTACACAAAGCCTGTTTAGGTGGTCTTCTATACGGACACGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595607.6