Pregenerated sensors for ZNF107 (Homo sapiens)
Ensembl gene IDs: ENSG00000196247Ensembl transcript IDs: ENST00000344930.7, ENST00000360117.8, ENST00000395391.1, ENST00000423627.5, ENST00000423627.6, ENST00000613690.4, ENST00000620827.4, ENST00000683053.1, ENST00000683492.1, ENST00000683656.1, ENST00000684016.1, ENST00000684494.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTTGTTGCTTTGGCTGGAGTGTAGTGGTGTGATTTCAGCTCACTaGAATCTTCGCCTCCCAGGTTTGAGCAATTCTCCTGCTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LLLLWLECSGVISAH*NLRLPGLSNSPASA Trigger: GGCTGAAGCAGGAGAATTGCTCAAACCTGGGAGGCGAAGATTGCAGTGAGCTGAAATCACACCACTACACTCCAGCCAAAGCAACAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000344930.7 ENST00000395391.1 ENST00000423627.5 ENST00000613690.4 ENST00000620827.4 |
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| 3UTR GCA 72 bp | CTTTGGCTGGAGTGTAGTGGTGTGATTTCAGCTCACTaGAATCTTCGCCTCCCAGGTTTGAGCAATTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: LWLECSGVISAH*NLRLPGLSNSP Trigger: AGGAGAATTGCTCAAACCTGGGAGGCGAAGATTGCAGTGAGCTGAAATCACACCACTACACTCCAGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000344930.7 ENST00000395391.1 ENST00000423627.5 ENST00000613690.4 ENST00000620827.4 |
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| CDS CCA 90 bp | GTCAGTGGTTCCTATCCGAAGGCAGAGGCGGGGCTTTTACAGAGCTaGTCCGAGGTACCGAGGTCGCGGGTGGGTCTCTTCAAGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: VSGSYPKAEAGLLQS*SEVPRSRVGLFKKS Trigger: CGACTTCTTGAAGAGACCCACCCGCGACCTCGGTACCTCGGACCAGCTCTGTAAAAGCCCCGCCTCTGCCTTCGGATAGGAACCACTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344930.7 ENST00000684016.1 |
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| CDS CCA 90 bp | TGGCTGGGTATCTATCCGAAGGCAGAGGCGGGGCTTTTACAGAGCTaGTCCGAGGTACCGAGGTCGCGGGTGGGTCTCTTCAAGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: WLGIYPKAEAGLLQS*SEVPRSRVGLFKKS Trigger: CGACTTCTTGAAGAGACCCACCCGCGACCTCGGTACCTCGGACCAGCTCTGTAAAAGCCCCGCCTCTGCCTTCGGATAGATACCCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683053.1 |
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| CDS CCA 90 bp | TTCAACCTTTCCTATCCGAAGGCAGAGGCGGGGCTTTTACAGAGCTaGTCCGAGGTACCGAGGTCGCGGGTGGGTCTCTTCAAGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: FNLSYPKAEAGLLQS*SEVPRSRVGLFKKS Trigger: CGACTTCTTGAAGAGACCCACCCGCGACCTCGGTACCTCGGACCAGCTCTGTAAAAGCCCCGCCTCTGCCTTCGGATAGGAAAGGTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000684494.1 |
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| CDS TCA 90 bp | GCTCTTTCAACCTTTCCCTCCACCTTAAGAGTTACCCGAGGTCCATaGTGGTCCATGGGGCCTCCGAGGTGTTCGGGCAGTGTCATTCCT | + |
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Preference number: 5 (lower is better) Translates to: ALSTFPSTLRVTRGP*WSMGPPRCSGSVIP Trigger: AGGAATGACACTGCCCGAACACCTCGGAGGCCCCATGGACCATCATGGACCTCGGGTAACTCTTAAGGTGGAGGGAAAGGTTGAAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 90 bp | GCCAAGGGCCTGGGAAACTGCCTGGGTGATTTGGCTAATGAAGGCTaGACCACTGTCAGATTGGATGGAAGTAGGGAGGCCGAAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: AKGLGNCLGDLANEG*TTVRLDGSREAETG Trigger: ACCTGTTTCGGCCTCCCTACTTCCATCCAATCTGACAGTGGTCCAGCCTTCATTAGCCAAATCACCCAGGCAGTTTCCCAGGCCCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS GCA 90 bp | GTATGGGGTGTGGAGATTCCACTGGATGCCAAGGGCCTGGGAAACTaGCTGGGTGATTTGGCTAATGAAGGCTGGACCACTGTCAGATTG | + |
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Preference number: 5 (lower is better) Translates to: VWGVEIPLDAKGLGN*LGDLANEGWTTVRL Trigger: CAATCTGACAGTGGTCCAGCCTTCATTAGCCAAATCACCCAGGCAGTTTCCCAGGCCCTTGGCATCCAGTGGAATCTCCACACCCCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS CCA 90 bp | CTCTTTATCAGGATGGGCTGTCTGGCCAGAGTGTCCTCATATGGCTaGGTATCTATCCGAAGGCAGAGGCGGGGCTTTTACAGAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: LFIRMGCLARVSSYG*VSIRRQRRGFYRAG Trigger: ACCAGCTCTGTAAAAGCCCCGCCTCTGCCTTCGGATAGATACCCAGCCATATGAGGACACTCTGGCCAGACAGCCCATCCTGATAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683053.1 |
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| CDS CCA 90 bp | GTCTGGCCAGAGTGTCCTCATATGGCTGGGTATCTGGTAGGTTCATaGGCGGTGGCTCAGATCCTGAGAAGCACAAGTGGTAGGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: VWPECPHMAGYLVGS*AVAQILRSTSGRRT Trigger: TGTTCTCCTACCACTTGTGCTTCTCAGGATCTGAGCCACCGCCCATGAACCTACCAGATACCCAGCCATATGAGGACACTCTGGCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000683492.1 ENST00000683656.1 ENST00000684494.1 |
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| CDS TCA 90 bp | AAACAGGTAACAATATCCTCCACCTTAAGAGTTACCCGAGGTCCATaGTGGTCCATGGGGCCTCCGAGGTGTTCGGGCAGTGTCATTCCT | + |
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Preference number: 5 (lower is better) Translates to: KQVTISSTLRVTRGP*WSMGPPRCSGSVIP Trigger: AGGAATGACACTGCCCGAACACCTCGGAGGCCCCATGGACCATCATGGACCTCGGGTAACTCTTAAGGTGGAGGATATTGTTACCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS CCA 90 bp | AGTCCAGTCCTTTCGGAGTTGGAGGGTGAGTTTTTAAGAGGCCGTTaGCTCTTTCAACCTTTCCTATCCGAAGGCAGAGGCGGGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SPVLSELEGEFLRGR*LFQPFLSEGRGGAF Trigger: AAAAGCCCCGCCTCTGCCTTCGGATAGGAAAGGTTGAAAGAGCCAACGGCCTCTTAAAAACTCACCCTCCAACTCCGAAAGGACTGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000684494.1 |
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| CDS TCA 90 bp | AGGGCGGACAGGAGCAGGACATTTAAGTTTCTTCAGGGATTTCGGTaGGTTTTAACGAGGTCGGGGAGAGTACTTGCGACTTCCAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RADRSRTFKFLQGFR*VLTRSGRVLATSKR Trigger: CCTCTTGGAAGTCGCAAGTACTCTCCCCGACCTCGTTAAAACTCACCGAAATCCCTGAAGAAACTTAAATGTCCTGCTCCTGTCCGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683492.1 |
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| CDS CCA 90 bp | TCCACTGAGGTTGTAGAGATCAGGGGGTTAAGCTCTTTATCAGGATaGGCTGTCTGGCCAGAGTGTCCTCATATGGCTGGGTATCTATCC | + |
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Preference number: 5 (lower is better) Translates to: STEVVEIRGLSSLSG*AVWPECPHMAGYLS Trigger: GGATAGATACCCAGCCATATGAGGACACTCTGGCCAGACAGCCCATCCTGATAAAGAGCTTAACCCCCTGATCTCTACAACCTCAGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683053.1 |
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| CDS CCA 90 bp | AGGAAGAAGGGTCAGGCTGAGTGTCAGATGGACACAGCTTTACTCTaGAAGGGTGAATCCACTGAGGAGGATCTTGTAAGCAGACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RKKGQAECQMDTALL*KGESTEEDLVSRQP Trigger: TGGCTGTCTGCTTACAAGATCCTCCTCAGTGGATTCACCCTTCCAGAGTAAAGCTGTGTCCATCTGACACTCAGCCTGACCCTTCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360117.8 ENST00000683053.1 ENST00000683492.1 |
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| CDS CCA 90 bp | TCCACTGAGGTTGTAGAGATCAGGGGGTTAAGCTCTTTATCAGGATaGGCTGTCTGGCCAGAGTGTCCTCATATGGCTGGGTATCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: STEVVEIRGLSSLSG*AVWPECPHMAGYLV Trigger: TACCAGATACCCAGCCATATGAGGACACTCTGGCCAGACAGCCCATCCTGATAAAGAGCTTAACCCCCTGATCTCTACAACCTCAGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000683492.1 ENST00000683656.1 |
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| CDS CCA 90 bp | ACGCTTTTACACTGTTGGTGGGACTGTGAACTAGTTCAACCATTGTaGAAGTCGGTGTGGCGATTCCTCAGGGATCTGGGGGTTTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: TLLHCWWDCELVQPL*KSVWRFLRDLGVWL Trigger: TAGCCAAACCCCCAGATCCCTGAGGAATCGCCACACCGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS CCA 90 bp | AGTCAGCCCGGAGGTGTGAGGGAGAGCAGTCTTTACAGGGCAAAGTaGCGGGTGGAAAATTACAACATGGTTTTGGGACTTGTTGACTCA | + |
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Preference number: 5 (lower is better) Translates to: SQPGGVRESSLYRAK*RVENYNMVLGLVDS Trigger: TGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACTTTGCCCTGTAAAGACTGCTCTCCCTCACACCTCCGGGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 90 bp | GCAAGGGTATTATCTGCACAGCCCTATGCTGATGGACTTGGGCTCTaGCAGGGACTGGTAAGGTTTGGTTTCCAGGGGCAATGTCAATTT | + |
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Preference number: 5 (lower is better) Translates to: ARVLSAQPYADGLGL*QGLVRFGFQGQCQF Trigger: AAATTGACATTGCCCCTGGAAACCAAACCTTACCAGTCCCTGTCAGAGCCCAAGTCCATCAGCATAGGGCTGTGCAGATAATACCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 90 bp | ACTCCTAGTCCTATAAGCAAGGGTATTATCTGCACAGCCCTATGCTaGTGGACTTGGGCTCTGACAGGGACTGGTAAGGTTTGGTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: TPSPISKGIICTALC*WTWALTGTGKVWFP Trigger: TGGAAACCAAACCTTACCAGTCCCTGTCAGAGCCCAAGTCCATCAGCATAGGGCTGTGCAGATAATACCCTTGCTTATAGGACTAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 90 bp | TGCTGGAGAGGATGTGGAGAAATAAGAACGCTTTTACACTGTTGGTaGGACTGTGAACTAGTTCAACCATTGTGGAAGTCGGTGTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: CWRGCGEIRTLLHCW*DCELVQPLWKSVWR Trigger: TCGCCACACCGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGCGTTCTTATTTCTCCACATCCTCTCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS CCA 90 bp | AGGTGCTGGAGAGGATGTGGAGAAATAAGAACGCTTTTACACTGTTaGTGGGACTGTGAACTAGTTCAACCATTGTGGAAGTCGGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: RCWRGCGEIRTLLHC*WDCELVQPLWKSVW Trigger: CCACACCGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGCGTTCTTATTTCTCCACATCCTCTCCAGCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS CCA 90 bp | CCAGCGTCCTTTGCCAAAGAAGGGTTGGACTGGTTTAACAGAGAGTaGGTTGAGAGTTTTGTAGAGGTAATTAGGCATTACTGGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: PASFAKEGLDWFNRE*VESFVEVIRHYWKW Trigger: CCACTTCCAGTAATGCCTAATTACCTCTACAAAACTCTCAACCCACTCTCTGTTAAACCAGTCCAACCCTTCTTTGGCAAAGGACGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 90 bp | GGCAAAGTGGCGGGTGGAAAATTACAACATGGTTTTGGGACTTGTTaGCTCAAGAAGTTGATCAACCAGTTGGAACAGAAACCCGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GKVAGGKLQHGFGTC*LKKLINQLEQKPVV Trigger: AACAACGGGTTTCTGTTCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 90 bp | AGAGCAGTCTTTACAGGGCAAAGTGGCGGGTGGAAAATTACAACATaGTTTTGGGACTTGTTGACTCAAGAAGTTGATCAACCAGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: RAVFTGQSGGWKITT*FWDLLTQEVDQPVG Trigger: TCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACTTTGCCCTGTAAAGACTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 90 bp | GTCTTTACAGGGCAAAGTGGCGGGTGGAAAATTACAACATGGTTTTaGGACTTGTTGACTCAAGAAGTTGATCAACCAGTTGGAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: VFTGQSGGWKITTWF*DLLTQEVDQPVGTE Trigger: TTCTGTTCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACTTTGCCCTGTAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 90 bp | GAGGCGTCTCATCTGGGAAGAAGTTATACAGAGTGCCCTAAAAGATaGGATCATCTATCCAGTTTAAGAGAGAATCTAAGGTGGGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: EASHLGRSYTECPKR*DHLSSLRENLRWEF Trigger: AAACTCCCACCTTAGATTCTCTCTTAAACTGGATAGATGATCTCATCTTTTAGGGCACTCTGTATAACTTCTTCCCAGATGAGACGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683492.1 |
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| CDS GCA 90 bp | AAGTCTGAAAGACATTGTCTGATTTTAGAAGCCTTTTCATTTAACTaGGAGGCAGCATCTCGTACTAGTCCAGACTGGTTGGTGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: KSERHCLILEAFSFN*EAASRTSPDWLVEK Trigger: TTTTTCCACCAACCAGTCTGGACTAGTACGAGATGCTGCCTCGCAGTTAAATGAAAAGGCTTCTAAAATCAGACAATGTCTTTCAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | TCCTATCCGAAGGCAGAGGCGGGGCTTTTACAGAGCTaGTCCGAGGTACCGAGGTCGCGGGTGGGTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SYPKAEAGLLQS*SEVPRSRVGLF Trigger: GAAGAGACCCACCCGCGACCTCGGTACCTCGGACCAGCTCTGTAAAAGCCCCGCCTCTGCCTTCGGATAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000344930.7 ENST00000684016.1 ENST00000684494.1 |
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| CDS CCA 72 bp | ACCTATCCGAAGGCAGAGGCGGGGCTTTTACAGAGCTaGTCCGAGGTACCGAGGTCGCGGGTGGGTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TYPKAEAGLLQS*SEVPRSRVGLF Trigger: GAAGAGACCCACCCGCGACCTCGGTACCTCGGACCAGCTCTGTAAAAGCCCCGCCTCTGCCTTCGGATAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423627.6 |
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| CDS CCA 72 bp | ATCTATCCGAAGGCAGAGGCGGGGCTTTTACAGAGCTaGTCCGAGGTACCGAGGTCGCGGGTGGGTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IYPKAEAGLLQS*SEVPRSRVGLF Trigger: GAAGAGACCCACCCGCGACCTCGGTACCTCGGACCAGCTCTGTAAAAGCCCCGCCTCTGCCTTCGGATAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683053.1 |
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| CDS TCA 72 bp | ACCTTTCCCTCCACCTTAAGAGTTACCCGAGGTCCATaGTGGTCCATGGGGCCTCCGAGGTGTTCGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TFPSTLRVTRGP*WSMGPPRCSGS Trigger: ACTGCCCGAACACCTCGGAGGCCCCATGGACCATCATGGACCTCGGGTAACTCTTAAGGTGGAGGGAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | TTCTCAGGGATTCTTCGAGCGGGACTTGGGGCGGCATaGACTCCTAATTGGGAGAGAGATCTTGGGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FSGILRAGLGAA*TPNWERDLGVG Trigger: CCCCACCCCAAGATCTCTCTCCCAATTAGGAGTCCATGCCGCCCCAAGTCCCGCTCGAAGAATCCCTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | TCAGTGGTGGGAGTGCTGCTGCAGGAGGTCCAGGGGTaGATGGTCATGCAGTGCGTATGCCTGCCATTACAA | + |
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Preference number: 6 (lower is better) Translates to: SVVGVLLQEVQG*MVMQCVCLPLQ Trigger: TTGTAATGGCAGGCATACGCACTGCATGACCATTCACCCCTGGACCTCCTGCAGCAGCACTCCCACCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | AGGATGGGCTGTCTGGCCAGAGTGTCCTCATATGGCTaGGTATCTGGTAGGTTCATGGGCGGTGGCTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RMGCLARVSSYG*VSGRFMGGGSD Trigger: ATCTGAGCCACCGCCCATGAACCTACCAGATACCCAGCCATATGAGGACACTCTGGCCAGACAGCCCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000683492.1 ENST00000683656.1 ENST00000684494.1 |
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| CDS TCA 72 bp | ACAATATCCTCCACCTTAAGAGTTACCCGAGGTCCATaGTGGTCCATGGGGCCTCCGAGGTGTTCGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TISSTLRVTRGP*WSMGPPRCSGS Trigger: ACTGCCCGAACACCTCGGAGGCCCCATGGACCATCATGGACCTCGGGTAACTCTTAAGGTGGAGGATATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS GCA 72 bp | GAGTGCTGCTGCAGGAGGTCCAGGGGTGAATGGTCATaGAGTGCGTATGCCTGCCATTACAAAACCCGGATT | + |
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Preference number: 6 (lower is better) Translates to: ECCCRRSRGEWS*SAYACHYKTRI Trigger: AATCCGGGTTTTGTAATGGCAGGCATACGCACTGCATGACCATTCACCCCTGGACCTCCTGCAGCAGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | CTGGGAAACTGCCTGGGTGATTTGGCTAATGAAGGCTaGACCACTGTCAGATTGGATGGAAGTAGGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGNCLGDLANEG*TTVRLDGSREA Trigger: GGCCTCCCTACTTCCATCCAATCTGACAGTGGTCCAGCCTTCATTAGCCAAATCACCCAGGCAGTTTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS CCA 72 bp | TGGATGCCAAGGGCCTGGGAAACTGCCTGGGTGATTTaGCTAATGAAGGCTGGACCACTGTCAGATTGGATG | + |
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Preference number: 6 (lower is better) Translates to: WMPRAWETAWVI*LMKAGPLSDWM Trigger: CATCCAATCTGACAGTGGTCCAGCCTTCATTAGCCAAATCACCCAGGCAGTTTCCCAGGCCCTTGGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS CCA 72 bp | GAGTGTCCTCATATGGCTGGGTATCTGGTAGGTTCATaGGCGGTGGCTCAGATCCTGAGAAGCACAAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: ECPHMAGYLVGS*AVAQILRSTSG Trigger: ACCACTTGTGCTTCTCAGGATCTGAGCCACCGCCCATGAACCTACCAGATACCCAGCCATATGAGGACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000683492.1 ENST00000683656.1 ENST00000684494.1 |
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| CDS CCA 72 bp | CACTGTTGGTGGGACTGTGAACTAGTTCAACCATTGTaGAAGTCGGTGTGGCGATTCCTCAGGGATCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: HCWWDCELVQPL*KSVWRFLRDLG Trigger: CCCCAGATCCCTGAGGAATCGCCACACCGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS TCA 72 bp | ACTTGCGACTTCCAAGAGGAGGAAGAAGGGTCAGGCTaGGTGTCAGATGGACACAGCTTTACTCTGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: TCDFQEEEEGSG*VSDGHSFTLEG Trigger: CCCTTCCAGAGTAAAGCTGTGTCCATCTGACACTCAGCCTGACCCTTCTTCCTCCTCTTGGAAGTCGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360117.8 ENST00000683053.1 ENST00000683492.1 |
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| CDS TCA 72 bp | TTATCTGCACAGCCCTATGCTGATGGACTTGGGCTCTaGCAGGGACTGGTAAGGTTTGGTTTCCAGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LSAQPYADGLGL*QGLVRFGFQGQ Trigger: TTGCCCCTGGAAACCAAACCTTACCAGTCCCTGTCAGAGCCCAAGTCCATCAGCATAGGGCTGTGCAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | GTTGTAGAGATCAGGGGGTTAAGCTCTTTATCAGGATaGGCTGTCTGGCCAGAGTGTCCTCATATGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VVEIRGLSSLSG*AVWPECPHMAG Trigger: CCCAGCCATATGAGGACACTCTGGCCAGACAGCCCATCCTGATAAAGAGCTTAACCCCCTGATCTCTACAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000360117.8 ENST00000683053.1 ENST00000683492.1 ENST00000683656.1 |
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| CDS CCA 72 bp | CCAAGAGGAGGAAGAAGGGTCAGGCTGAGTGTCAGATaGACACAGCTTTACTCTGGAAGGGTGAATCCACTG | + |
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Preference number: 6 (lower is better) Translates to: PRGGRRVRLSVR*TQLYSGRVNPL Trigger: CAGTGGATTCACCCTTCCAGAGTAAAGCTGTGTCCATCTGACACTCAGCCTGACCCTTCTTCCTCCTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360117.8 ENST00000683053.1 ENST00000683492.1 |
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| CDS CCA 72 bp | GACTGTGAACTAGTTCAACCATTGTGGAAGTCGGTGTaGCGATTCCTCAGGGATCTGGGGGTTTGGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: DCELVQPLWKSV*RFLRDLGVWLP Trigger: TGGTAGCCAAACCCCCAGATCCCTGAGGAATCGCCACACCGACTTCCACAATGGTTGAACTAGTTCACAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS CAA 90 bp | AGAACGCTTTTACACTGTTGGTGGGACTGTGAACTAGTTCAACCATaGTGGAAGTCGGTGTGGCGATTCCTCAGGGATCTGGGGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RTLLHCWWDCELVQP*WKSVWRFLRDLGVW Trigger: CCAAACCCCCAGATCCCTGAGGAATCGCCACACCGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGCGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS TCA 72 bp | AAGAGGCCGTTGGCTCTTTCAACCTTTCCTGAGGAATaGGGATGGTATGGGGTGTGGAGATTCCACTGGATG | + |
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Preference number: 6 (lower is better) Translates to: KRPLALSTFPEE*GWYGVWRFHWM Trigger: CATCCAGTGGAATCTCCACACCCCATACCATCCTCATTCCTCAGGAAAGGTTGAAAGAGCCAACGGCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS CCA 72 bp | ATCAGGGGGTTAAGCTCTTTATCAGGATGGGCTGTCTaGCCAGAGTGTCCTCATATGGCTGGGTATCTATCC | + |
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Preference number: 6 (lower is better) Translates to: IRGLSSLSGWAV*PECPHMAGYLS Trigger: GGATAGATACCCAGCCATATGAGGACACTCTGGCCAGACAGCCCATCCTGATAAAGAGCTTAACCCCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683053.1 |
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| CDS CCA 72 bp | GGTCAGGCTGAGTGTCAGATGGACACAGCTTTACTCTaGAAGGGTGAATCCACTGAGGAGGATCTTGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: GQAECQMDTALL*KGESTEEDLVS Trigger: GCTTACAAGATCCTCCTCAGTGGATTCACCCTTCCAGAGTAAAGCTGTGTCCATCTGACACTCAGCCTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360117.8 ENST00000683053.1 ENST00000683492.1 |
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| CDS CCA 72 bp | ATCAGGGGGTTAAGCTCTTTATCAGGATGGGCTGTCTaGCCAGAGTGTCCTCATATGGCTGGGTATCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: IRGLSSLSGWAV*PECPHMAGYLV Trigger: TACCAGATACCCAGCCATATGAGGACACTCTGGCCAGACAGCCCATCCTGATAAAGAGCTTAACCCCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000683492.1 ENST00000683656.1 |
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| CDS CCA 72 bp | CTTTCGGAGTTGGAGGGTGAGTTTTTAAGAGGCCGTTaGCTCTTTCAACCTTTCCTATCCGAAGGCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LSELEGEFLRGR*LFQPFLSEGRG Trigger: GCCTCTGCCTTCGGATAGGAAAGGTTGAAAGAGCCAACGGCCTCTTAAAAACTCACCCTCCAACTCCGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000684494.1 |
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| CDS CAA 72 bp | CAGTGCGTATGCCTGCCATTACAAAACCCGGATTGTTaGTTAAGCAGAGAGGTGCTGATGACTTCTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: QCVCLPLQNPDC*LSREVLMTSGG Trigger: GCCCCCAGAAGTCATCAGCACCTCTCTGCTTAACAAACAATCCGGGTTTTGTAATGGCAGGCATACGCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | GGTGCTTGTCCAGTTAGTGGTGAGGCAGACATAGGTTaGAGTTCCACACAAGAAGAATATGCCTTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GACPVSGEADIG*SSTQEEYALAG Trigger: CCCAGCCAAGGCATATTCTTCTTGTGTGGAACTTCAACCTATGTCTGCCTCACCACTAACTGGACAAGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | CCTGATGACAGGTTGTGTTGGATGCATAAAGGGGCTTaGAAAGTTAAGACAGCGTTTGTAGTCACAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PDDRLCWMHKGA*KVKTAFVVTGP Trigger: CGGCCCTGTGACTACAAACGCTGTCTTAACTTTCCAAGCCCCTTTATGCATCCAACACAACCTGTCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | AGCTGTTTGGGAGACCTGGAAGTTAATACAGTCAGTTaGGGCTTGAAGCTGCAAGGCGTAGTTGCACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SCLGDLEVNTVS*GLKLQGVVALM Trigger: CATCAGTGCAACTACGCCTTGCAGCTTCAAGCCCCAACTGACTGTATTAACTTCCAGGTCTCCCAAACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | GGAGGTGTGAGGGAGAGCAGTCTTTACAGGGCAAAGTaGCGGGTGGAAAATTACAACATGGTTTTGGGACTT | + |
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Preference number: 6 (lower is better) Translates to: GGVRESSLYRAK*RVENYNMVLGL Trigger: AAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACTTTGCCCTGTAAAGACTGCTCTCCCTCACACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CAA 72 bp | TTACACTGTTGGTGGGACTGTGAACTAGTTCAACCATaGTGGAAGTCGGTGTGGCGATTCCTCAGGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: LHCWWDCELVQP*WKSVWRFLRDL Trigger: CAGATCCCTGAGGAATCGCCACACCGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS CAA 90 bp | GAGGTGCTGATGACTTCTGGGGGCTTTGAGAAGCGGACAGGCTGTTaGAATGTAGCTGTTTGGGAGACCTGGAAGTTAATACAGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: EVLMTSGGFEKRTGC*NVAVWETWKLIQSV Trigger: AACTGACTGTATTAACTTCCAGGTCTCCCAAACAGCTACATTCAAACAGCCTGTCCGCTTCTCAAAGCCCCCAGAAGTCATCAGCACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | GTAGGAGAACAGTCCAGTCCTTTCGGAGTTGGAGGGTaGGTTTTTAAGAGGCCGTTGGCTCTTTCAACCTTT | + |
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Preference number: 6 (lower is better) Translates to: VGEQSSPFGVGG*VFKRPLALSTF Trigger: AAAGGTTGAAAGAGCCAACGGCCTCTTAAAAACTCACCCTCCAACTCCGAAAGGACTGGACTGTTCTCCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000683492.1 ENST00000683656.1 ENST00000684494.1 |
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| CDS GCA 72 bp | GGCAGACATAGGTTGAAGTTCCACACAAGAAGAATATaGCTTGGCTGGGTAGGCAGAACTGGCTGTGTATGT | + |
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Preference number: 6 (lower is better) Translates to: GRHRLKFHTRRI*LGWVGRTGCVC Trigger: ACATACACAGCCAGTTCTGCCTACCCAGCCAAGGCATATTCTTCTTGTGTGGAACTTCAACCTATGTCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | CTTTCGGAGTTGGAGGGTGAGTTTTTAAGAGGCCGTTaGCTCTTTCAACCTTTCCTGAGGAATGAGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: LSELEGEFLRGR*LFQPFLRNEDG Trigger: ACCATCCTCATTCCTCAGGAAAGGTTGAAAGAGCCAACGGCCTCTTAAAAACTCACCCTCCAACTCCGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS CCA 72 bp | GCAAAGCCAGCGTCCTTTGCCAAAGAAGGGTTGGACTaGTTTAACAGAGAGTGGGTTGAGAGTTTTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: AKPASFAKEGLD*FNREWVESFVE Trigger: CTCTACAAAACTCTCAACCCACTCTCTGTTAAACCAGTCCAACCCTTCTTTGGCAAAGGACGCTGGCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | GGCCGTGTATGGGCTTTTCATTACTTGTGTAATGGGTaGGGCTGGACATGTAGGAGCGTAAAAGTTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: GRVWAFHYLCNG*GWTCRSVKVEL Trigger: CAGTTCAACTTTTACGCTCCTACATGTCCAGCCTCACCCATTACACAAGTAATGAAAAGCCCATACACGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | GTGATTTGGCTAATGAAGGCTGGACCACTGTCAGATTaGATGGAAGTAGGGAGGCCGAAACAGGTAACAATA | + |
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Preference number: 6 (lower is better) Translates to: VIWLMKAGPLSD*MEVGRPKQVTI Trigger: TATTGTTACCTGTTTCGGCCTCCCTACTTCCATCCAATCTGACAGTGGTCCAGCCTTCATTAGCCAAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683656.1 |
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| CDS CCA 72 bp | TTTGAGAAGCGGACAGGCTGTTTGAATGTAGCTGTTTaGGAGACCTGGAAGTTAATACAGTCAGTTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: FEKRTGCLNVAV*ETWKLIQSVGA Trigger: AGCCCCAACTGACTGTATTAACTTCCAGGTCTCCCAAACAGCTACATTCAAACAGCCTGTCCGCTTCTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CAA 72 bp | ATGACTTCTGGGGGCTTTGAGAAGCGGACAGGCTGTTaGAATGTAGCTGTTTGGGAGACCTGGAAGTTAATA | + |
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Preference number: 6 (lower is better) Translates to: MTSGGFEKRTGC*NVAVWETWKLI Trigger: TATTAACTTCCAGGTCTCCCAAACAGCTACATTCAAACAGCCTGTCCGCTTCTCAAAGCCCCCAGAAGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CAA 72 bp | ACTGGTAAGGTTTGGTTTCCAGGGGCAATGTCAATTTaGGGGCTTAGGAAGATTAGGGTACAGGTGCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: TGKVWFPGAMSI*GLRKIRVQVLV Trigger: GACAAGCACCTGTACCCTAATCTTCCTAAGCCCCAAAATTGACATTGCCCCTGGAAACCAAACCTTACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CAA 90 bp | GGGCAAAGTGGCGGGTGGAAAATTACAACATGGTTTTGGGACTTGTaGACTCAAGAAGTTGATCAACCAGTTGGAACAGAAACCCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GQSGGWKITTWFWDL*TQEVDQPVGTETRC Trigger: ACAACGGGTTTCTGTTCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACTTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CAA 90 bp | ACAGGGCAAAGTGGCGGGTGGAAAATTACAACATGGTTTTGGGACTaGTTGACTCAAGAAGTTGATCAACCAGTTGGAACAGAAACCCGT | + |
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Preference number: 6 (lower is better) Translates to: TGQSGGWKITTWFWD*LTQEVDQPVGTETR Trigger: ACGGGTTTCTGTTCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACTTTGCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | CTGCACGACCTGTCAGGGTATTTTCGGTCATTTCATTaGTGGAGAAGTTGGCCAATGACTGCATATGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: LHDLSGYFRSFH*WRSWPMTAYVG Trigger: TCCTACATATGCAGTCATTGGCCAACTTCTCCATCAATGAAATGACCGAAAATACCCTGACAGGTCGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CAA 72 bp | ACTGCACGACCTGTCAGGGTATTTTCGGTCATTTCATaGATGGAGAAGTTGGCCAATGACTGCATATGTAGG | + |
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Preference number: 6 (lower is better) Translates to: TARPVRVFSVIS*MEKLANDCICR Trigger: CCTACATATGCAGTCATTGGCCAACTTCTCCATCAATGAAATGACCGAAAATACCCTGACAGGTCGTGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CAA 72 bp | GAAGGGGACAAACCTGCTATTCCAGTTCCTGTGGCATaGGTAACTCCTAGTCCTATAAGCAAGGGTATTATC | + |
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Preference number: 6 (lower is better) Translates to: EGDKPAIPVPVA*VTPSPISKGII Trigger: GATAATACCCTTGCTTATAGGACTAGGAGTTACCAATGCCACAGGAACTGGAATAGCAGGTTTGTCCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | TGCAGAGTTACTGCTGCTAAGGAGTCTATTTGGGATTaGAGAGTAAGGGTGGATTTTGCTATGTCTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: CRVTAAKESIWD*RVRVDFAMSCR Trigger: CCTACAAGACATAGCAAAATCCACCCTTACTCTCCAATCCCAAATAGACTCCTTAGCAGCAGTAACTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | TGGTTCTGCAGAGTTACTGCTGCTAAGGAGTCTATTTaGGATTGGAGAGTAAGGGTGGATTTTGCTATGTCT | + |
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Preference number: 6 (lower is better) Translates to: WFCRVTAAKESI*DWRVRVDFAMS Trigger: AGACATAGCAAAATCCACCCTTACTCTCCAATCCCAAATAGACTCCTTAGCAGCAGTAACTCTGCAGAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS GCA 72 bp | AGACATTGTCTGATTTTAGAAGCCTTTTCATTTAACTaGGAGGCAGCATCTCGTACTAGTCCAGACTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RHCLILEAFSFN*EAASRTSPDWL Trigger: CAACCAGTCTGGACTAGTACGAGATGCTGCCTCGCAGTTAAATGAAAAGGCTTCTAAAATCAGACAATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS CCA 72 bp | AGAGGATGTGGAGAAATAAGAACGCTTTTACACTGTTaGTGGGACTGTGAACTAGTTCAACCATTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGCGEIRTLLHC*WDCELVQPLWK Trigger: CTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGCGTTCTTATTTCTCCACATCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684016.1 |
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| CDS CAA 72 bp | AGTGGCGGGTGGAAAATTACAACATGGTTTTGGGACTaGTTGACTCAAGAAGTTGATCAACCAGTTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: SGGWKITTWFWD*LTQEVDQPVGT Trigger: TGTTCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | TACAACATGGTTTTGGGACTTGTTGACTCAAGAAGTTaGTCAACCAGTTGGAACAGAAACCCGTTGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YNMVLGLVDSRS*STSWNRNPLFF Trigger: GAAGAACAACGGGTTTCTGTTCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | GCGGGTGGAAAATTACAACATGGTTTTGGGACTTGTTaGCTCAAGAAGTTGATCAACCAGTTGGAACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: AGGKLQHGFGTC*LKKLINQLEQK Trigger: TTTCTGTTCCAACTGGTTGATCAACTTCTTGAGTCAACAAGTCCCAAAACCATGTTGTAATTTTCCACCCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683492.1 |
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| CDS TCA 72 bp | CATCTGGGAAGAAGTTATACAGAGTGCCCTAAAAGATaGGATCATCTATCCAGTTTAAGAGAGAATCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: HLGRSYTECPKR*DHLSSLRENLR Trigger: CCTTAGATTCTCTCTTAAACTGGATAGATGATCTCATCTTTTAGGGCACTCTGTATAACTTCTTCCCAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360117.8 ENST00000683492.1 |
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