RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF106 (Homo sapiens)

Ensembl gene IDs: ENSG00000103994

Ensembl transcript IDs: ENST00000263805.8, ENST00000564754.7, ENST00000565380.5, ENST00000565500.5, ENST00000565611.5, ENST00000565660.5, ENST00000565948.1, ENST00000567772.2, ENST00000568906.5, ENST00000569648.5, ENST00000570078.1

Found 1162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGGGGCGAAGACAGACCTGGATGGTCTGCAATCCCAGAGAGCATaGGGCACCATGTCCCAAAGCTTGGTATGTGGCCCTGGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: TGAKTDLDGLQSQRA*GTMSQSLVCGPGLL
Trigger: GAGGAGCCCAGGGCCACATACCAAGCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTGTCTTCGCCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
3UTR TCA 90 bp TACGCCGCAGAGCATTCGAGGCTCTCAGCACACTGCCAGCCAGCGTaGAAATGCGGCTTCACTACAGCCCAGAGAAAAGGGCCAGGTTTA +
Preference number: 1 (lower is better)
Translates to: YAAEHSRLSAHCQPA*KCGFTTAQRKGPGL
Trigger: TAAACCTGGCCCTTTTCTCTGGGCTGTAGTGAAGCCGCATTTTCACGCTGGCTGGCAGTGTGCTGAGAGCCTCGAATGCTCTGCGGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR CCA 90 bp ATGGTCTGCAATCCCAGAGAGCATGAGGCACCATGTCCCAAAGCTTaGTATGTGGCCCTGGGCTCCTCCCCCAATTTTATCTCTCTGAAG +
Preference number: 1 (lower is better)
Translates to: MVCNPREHEAPCPKA*YVALGSSPNFISLK
Trigger: CTTCAGAGAGATAAAATTGGGGGAGGAGCCCAGGGCCACATACCAAGCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTGCAGACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
3UTR CCA 90 bp TCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATT +
Preference number: 1 (lower is better)
Translates to: SMAAIGLGTAIQWER*RLATEQTKRVQTNI
Trigger: AATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR CCA 90 bp GTGAGTGGATATATGTGCACTAACAGGGGCGAAGACAGACCTGGATaGTCTGCAATCCCAGAGAGCATGAGGCACCATGTCCCAAAGCTT +
Preference number: 1 (lower is better)
Translates to: VSGYMCTNRGEDRPG*SAIPESMRHHVPKL
Trigger: AAGCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTGTCTTCGCCCCTGTTAGTGCACATATATCCACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
3UTR GCA 90 bp AGAAGTTCCCACAACTGCCCAACACCTCACCTACCCGTTTCCTGCTaGACAAAGTCTCCTTCACTCTCATCTTTTCGATACATCGTCAGG +
Preference number: 1 (lower is better)
Translates to: RSSHNCPTPHLPVSC*TKSPSLSSFRYIVR
Trigger: CCTGACGATGTATCGAAAAGATGAGAGTGAAGGAGACTTTGTGCAGCAGGAAACGGGTAGGTGAGGTGTTGGGCAGTTGTGGGAACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 90 bp CTCAGAAGTTCCCACAACTGCCCAACACCTCACCTACCCGTTTCCTaGTGCACAAAGTCTCCTTCACTCTCATCTTTTCGATACATCGTC +
Preference number: 1 (lower is better)
Translates to: LRSSHNCPTPHLPVS*CTKSPSLSSFRYIV
Trigger: GACGATGTATCGAAAAGATGAGAGTGAAGGAGACTTTGTGCAGCAGGAAACGGGTAGGTGAGGTGTTGGGCAGTTGTGGGAACTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 90 bp CACTACAGCCCAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATaGATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAACAGTT +
Preference number: 1 (lower is better)
Translates to: HYSPEKRARFSHRSR*IFPGNDHSQTHRTV
Trigger: AACTGTTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTGGGCTGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 90 bp TTACCGATTCTACCACTCTGTAATACTCTCAGAAGTTCCCACAACTaGCCAACACCTCACCTACCCGTTTCCTGCTGCACAAAGTCTCCT +
Preference number: 1 (lower is better)
Translates to: LPILPLCNTLRSSHN*PTPHLPVSCCTKSP
Trigger: AGGAGACTTTGTGCAGCAGGAAACGGGTAGGTGAGGTGTTGGGCAGTTGTGGGAACTTCTGAGAGTATTACAGAGTGGTAGAATCGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 90 bp GTAATTTATCATCCCATAGAGCTGCCCAGACTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTTCTCCTTCCTTACTTCACCAAGAAA +
Preference number: 1 (lower is better)
Translates to: VIYHPIELPRLMLGV*LASNHFLLPYFTKK
Trigger: TTTCTTGGTGAAGTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGGCAGCTCTATGGGATGATAAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR GCA 90 bp TTGTCAGGTCATTTAATGGTTTCTTTCCTTCACAAAGCCACTAAATaGCAGAGTCAACACAGATCCCTGAGCCATAGCTCTTCTCTGAGG +
Preference number: 1 (lower is better)
Translates to: LSGHLMVSFLHKATK*QSQHRSLSHSSSLR
Trigger: CCTCAGAGAAGAGCTATGGCTCAGGGATCTGTGTTGACTCTGGCATTTAGTGGCTTTGTGAAGGAAAGAAACCATTAAATGACCTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 90 bp GATGTAAGCATAAACTGCAGTTATTTGAGCAAACCAGAGCATATGTaGTGTTCAAATCCCACTTCACAATATACTTCAATCTCACCTCCA +
Preference number: 1 (lower is better)
Translates to: DVSINCSYLSKPEHM*CSNPTSQYTSISPP
Trigger: TGGAGGTGAGATTGAAGTATATTGTGAAGTGGGATTTGAACAGCACATATGCTCTGGTTTGCTCAAATAACTGCAGTTTATGCTTACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTaGAGAACGCAAATAGCATATATCACTATATGCCATGCTGTCCCA +
Preference number: 1 (lower is better)
Translates to: VKLGNQLGSVSSINI*RTQIAYITICHAVP
Trigger: TGGGACAGCATGGCATATAGTGATATATGCTATTTGCGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR CCA 90 bp AGTTTGGCTTCTCTGGATATCCTTATAGGAAATAGGGGTGAGAGGTaGGAAAAGCTTCTCAATCTCATACAGAAACAGCACAAATATTTA +
Preference number: 1 (lower is better)
Translates to: SLASLDILIGNRGER*EKLLNLIQKQHKYL
Trigger: TAAATATTTGTGCTGTTTCTGTATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATCCAGAGAAGCCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR TCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCGCCCGGCCACGTTCTaGGTTTTGAGGATCCAGAAA +
Preference number: 2 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRRPATF*VLRIQK
Trigger: TTTCTGGATCCTCAAAACTCAGAACGTGGCCGGGCG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR TCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCATTTTCCCGGGAAATaGCCATTCCCAAACCCACAG +
Preference number: 2 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRHFPGK*PFPNPQ
Trigger: CTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGC +
Preference number: 2 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSGIFDG*HRSRHG
Trigger: GCCGTGCCTAGACCGATGGCAGCCATCGAATATTCC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGC +
Preference number: 2 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAGIFDG*HRSRHG
Trigger: GCCGTGCCTAGACCGATGGCAGCCATCGAATATTCC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR TCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCACCCACTGAGGGTTTGTaGATTTGGCTGTTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAPTEGL*IWLFSV
Trigger: CACTGAGAACAGCCAAATTCACAAACCCTCAGTGGG...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR TCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCCCTGCCCGATAGCCTaGGGGAAGACATGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMPCPIA*GKTCEW
Trigger: CCACTCACATGTCTTCCCTCAGGCTATCGGGCAGGG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGC +
Preference number: 2 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGGIFDG*HRSRHG
Trigger: GCCGTGCCTAGACCGATGGCAGCCATCGAATATTCC...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGTTAGGTCTACGCACTaGCTCACACTGAGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAVRSTH*LTLSFL
Trigger: TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAAC...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGTTAGGTCTACGCACTaGCTCACACTGAGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVVRSTH*LTLSFL
Trigger: TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAAC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGGGAGAGATGGAGGCTaGCAACTGAACAAACCAAAA +
Preference number: 2 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAGRDGG*QLNKPK
Trigger: TTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAA +
Preference number: 2 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVIQWER*RLATEQ
Trigger: TTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTAT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTT +
Preference number: 2 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSALMLGV*LASNHF
Trigger: AAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCAGACCTGGATGGTCTaGAATCCCAGAGAGCATGAG +
Preference number: 2 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMQTWMV*NPREHE
Trigger: CTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGTCGCCCAGGCTGGAGTaGAGTAGTATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMSPRLE*SSMILA
Trigger: AGCCAAGATCATACTACTGCACTCCAGCCTGGGCGA...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAAGTCATCGATCCAGATaGATTTTCCCGGGAAATGAC +
Preference number: 2 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGSHRSR*IFPGND
Trigger: GTCATTTCCCGGGAAAATGCATCTGGATCGATGACT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 2 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCTTGGTATGTGGCCCTaGGCTCCTCCCCCAATTTTA +
Preference number: 2 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLLGMWP*APPPIL
Trigger: TAAAATTGGGGGAGGAGCCCAGGGCCACATACCAAG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR TCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 2 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCATTTTCCCGGGAAATaGCCATTCCCAAACCCACAG +
Preference number: 2 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLHFPGK*PFPNPQ
Trigger: CTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGTTAGGTCTACGCACTaGCTCACACTGAGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGVRSTH*LTLSFL
Trigger: TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAAC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAGTGAGTGGATATATGTaGACTAACAGGGGCGAAGAC +
Preference number: 2 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEVSGYM*TNRGED
Trigger: GTCTTCGCCCCTGTTAGTGCACATATATCCACTCAC...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 2 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 2 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCCAAAGCTTGGTATGTaGCCCTGGGCTCCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: HYFINVAGMAFVILEAPVPKLGM*PWAPPP
Trigger: TGGGGGAGGAGCCCAGGGCCACATACCAAGCTTTGG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR CAA 90 bp GGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAAAGGAAGATAAAGGTACACCTCCAG +
Preference number: 2 (lower is better)
Translates to: GWQLNKPKGFKPTLG*QGQTLERKIKVHLQ
Trigger: CTGGAGGTGTACCTTTATCTTCCTTTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 2 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR TCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCTGAGGGAAGACATGTaGGTGGATATATGTGCACTA +
Preference number: 2 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMLREDM*VDICAL
Trigger: TAGTGCACATATATCCACTCACATGTCTTCCCTCAG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 2 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 2 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR TCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACGCACTGCCTCACACTaGGCTTTCTATCCACATTTA +
Preference number: 2 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTRTASH*AFYPHL
Trigger: TAAATGTGGATAGAAAGCTCAGTGTGAGGCAGTGCG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR TCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAGTGGAAAACACCCCGTaGGCCCAGAGGAATATTCGA +
Preference number: 2 (lower is better)
Translates to: DILIGNRGERWEKLLNLIVENTP*AQRNIR
Trigger: TCGAATATTCCTCTGGGCTCACGGGGTGTTTTCCAC...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR TCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAGCTCACAGACCCTCTTaGAGCCTATCCATAAACCCC +
Preference number: 2 (lower is better)
Translates to: DILIGNRGERWEKLLNLIAHRPS*SLSINP
Trigger: GGGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGC...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAATATCACTATATGCCATaGTGTCCCAGAGAAGTATGG +
Preference number: 2 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEYHYMP*CPREVW
Trigger: CCATACTTCTCTGGGACAGCATGGCATATAGTGATA...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAGCATATATCACTATATaGCATGCTGTCCCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEAYITI*HAVPEK
Trigger: CTTCTCTGGGACAGCATGGCATATAGTGATATATGC...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGCATATATCACTATATaGCATGCTGTCCCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGAYITI*HAVPEK
Trigger: CTTCTCTGGGACAGCATGGCATATAGTGATATATGC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 2 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGGGAGAGATGGAGGCTaGCAACTGAACAAACCAAAA +
Preference number: 2 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEGRDGG*QLNKPK
Trigger: TTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATCCCCAGTCTCACTACTaGGATGCCCTTAACCCAGAG +
Preference number: 2 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDPQSHY*DALNPE
Trigger: CTCTGGGTTAAGGGCATCCCAGTAGTGAGACTGGGG...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567772.2
3UTR-3UTR TCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATACAGCTAGCAGGGAAGTaGAGGCAAAGAACTGTCTCA +
Preference number: 2 (lower is better)
Translates to: DILIGNRGERWEKLLNLIQLAGK*RQRTVS
Trigger: TGAGACAGTTCTTTGCCTTCACTTCCCTGCTAGCTG...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTT +
Preference number: 2 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTLMLGV*LASNHF
Trigger: AAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAA +
Preference number: 2 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKIQWER*RLATEQ
Trigger: TTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTAT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 2 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 2 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 2 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGTGAGTGGATATATGTaGACTAACAGGGGCGAAGAC +
Preference number: 2 (lower is better)
Translates to: HYFINVAGMAFVILEAPVVSGYM*TNRGED
Trigger: GTCTTCGCCCCTGTTAGTGCACATATATCCACTCAC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 2 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 2 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGGGAGAGATGGAGGCTaGCAACTGAACAAACCAAAA +
Preference number: 2 (lower is better)
Translates to: HYFINVAGMAFVILEAPVGRDGG*QLNKPK
Trigger: TTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR TCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 2 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCAAAACTGTATTCAGATaGTTTATTCTAACCCCCTCT +
Preference number: 2 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLKTVFR*FILTPS
Trigger: AGAGGGGGTTAGAATAAAGCATCTGAATACAGTTTT...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 2 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTT +
Preference number: 2 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTLMLGV*LASNHF
Trigger: AAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGCATATATCACTATATaGCATGCTGTCCCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTAYITI*HAVPEK
Trigger: CTTCTCTGGGACAGCATGGCATATAGTGATATATGC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGCATATATCACTATATaGCATGCTGTCCCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVAYITI*HAVPEK
Trigger: CTTCTCTGGGACAGCATGGCATATAGTGATATATGC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 2 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTATCACTATATGCCATaGTGTCCCAGAGAAGTATGG +
Preference number: 2 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGYHYMP*CPREVW
Trigger: CCATACTTCTCTGGGACAGCATGGCATATAGTGATA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 2 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR-3UTR CAA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCTCAAATGCCTGACCTaGAGTGATCCACCCGCCTCG +
Preference number: 3 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRLKCLT*SDPPAS
Trigger: CGAGGCGGGTGGATCACTCAAGGTCAGGCATTTGAG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR TCA 72 bp GAGCATTCGAGGCTCTCAGCACACTGCCAGCCAGCGTaGAAATGCGGCTTCACTACAGCCCAGAGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: EHSRLSAHCQPA*KCGFTTAQRKG
Trigger: CCCTTTTCTCTGGGCTGTAGTGAAGCCGCATTTTCACGCTGGCTGGCAGTGTGCTGAGAGCCTCGAATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 72 bp AAAACACCCCGTGAGCCCAGAGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGCCATACAGTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: KTPREPRGIFDG*HRSRHGHTVGE
Trigger: CTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTCTGGGCTCACGGGGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR TCA 72 bp AAGACAGACCTGGATGGTCTGCAATCCCAGAGAGCATaGGGCACCATGTCCCAAAGCTTGGTATGTGGCCCT +
Preference number: 3 (lower is better)
Translates to: KTDLDGLQSQRA*GTMSQSLVCGP
Trigger: AGGGCCACATACCAAGCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
3UTR TCA 72 bp GAAGTCCCCCTGCCCGATAGCCTGAGGGAAGACATGTaGGTGGATATATGTGCACTAACAGGGGCGAAGACA +
Preference number: 3 (lower is better)
Translates to: EVPLPDSLREDM*VDICALTGAKT
Trigger: TGTCTTCGCCCCTGTTAGTGCACATATATCCACTCACATGTCTTCCCTCAGGCTATCGGGCAGGGGGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
3UTR CCA 72 bp GCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAAACCAAAAGGGTTCAA +
Preference number: 3 (lower is better)
Translates to: AIGLGTAIQWER*RLATEQTKRVQ
Trigger: TTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR CCA 72 bp AATCCCAGAGAGCATGAGGCACCATGTCCCAAAGCTTaGTATGTGGCCCTGGGCTCCTCCCCCAATTTTATC +
Preference number: 3 (lower is better)
Translates to: NPREHEAPCPKA*YVALGSSPNFI
Trigger: GATAAAATTGGGGGAGGAGCCCAGGGCCACATACCAAGCTTTGGGACATGGTGCCTCATGCTCTCTGGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
3UTR-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAA +
Preference number: 3 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERKPTLG*QGQTLE
Trigger: TTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR GCA 72 bp TCCCACAACTGCCCAACACCTCACCTACCCGTTTCCTaGTGCACAAAGTCTCCTTCACTCTCATCTTTTCGA +
Preference number: 3 (lower is better)
Translates to: SHNCPTPHLPVS*CTKSPSLSSFR
Trigger: TCGAAAAGATGAGAGTGAAGGAGACTTTGTGCAGCAGGAAACGGGTAGGTGAGGTGTTGGGCAGTTGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 72 bp CTACCACTCTGTAATACTCTCAGAAGTTCCCACAACTaGCCAACACCTCACCTACCCGTTTCCTGCTGCACA +
Preference number: 3 (lower is better)
Translates to: LPLCNTLRSSHN*PTPHLPVSCCT
Trigger: TGTGCAGCAGGAAACGGGTAGGTGAGGTGTTGGGCAGTTGTGGGAACTTCTGAGAGTATTACAGAGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CAA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAA +
Preference number: 3 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVKPTLG*QGQTLE
Trigger: TTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR GCA 72 bp CATCCCATAGAGCTGCCCAGACTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTTCTCCTTCCTTACTTC +
Preference number: 3 (lower is better)
Translates to: HPIELPRLMLGV*LASNHFLLPYF
Trigger: GAAGTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGGCAGCTCTATGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR GCA 72 bp CCAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATaGATTTTCCCGGGAAATGACCATTCCCAAACCCAC +
Preference number: 3 (lower is better)
Translates to: PEKRARFSHRSR*IFPGNDHSQTH
Trigger: GTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CAA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAACCATGTCCCAAAGCTaGGTATGTGGCCCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: DILIGNRGERWEKLLNLITMSQS*VCGPGL
Trigger: GAGCCCAGGGCCACATACCAAGCTTTGGGACATGGT...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CAA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGACTGTTAGAGTTTTGTTaGCATGGTGTGGAACTGCTT +
Preference number: 3 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGLLEFC*HGVELL
Trigger: AAGCAGTTCCACACCATGCAAACAAAACTCTAACAG...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 72 bp ACAGCAGATGTAAAGGTAGACGTTAGGTCTACGCACTaGCTCACACTGAGCTTTCTATCCACATTTACAGAG +
Preference number: 3 (lower is better)
Translates to: TADVKVDVRSTH*LTLSFLSTFTE
Trigger: CTCTGTAAATGTGGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
3UTR GCA 72 bp AGTAGGTCTGGTTTCTATGAGGAGCTCATATCCACTTaGATAAGGAAACCTAGTCTATCCCAAATCACCTCC +
Preference number: 3 (lower is better)
Translates to: SRSGFYEELIST*IRKPSLSQITS
Trigger: GGAGGTGATTTGGGATAGACTAGGTTTCCTTATGCAAGTGGATATGAGCTCCTCATAGAAACCAGACCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 72 bp CATTTAATGGTTTCTTTCCTTCACAAAGCCACTAAATaGCAGAGTCAACACAGATCCCTGAGCCATAGCTCT +
Preference number: 3 (lower is better)
Translates to: HLMVSFLHKATK*QSQHRSLSHSS
Trigger: AGAGCTATGGCTCAGGGATCTGTGTTGACTCTGGCATTTAGTGGCTTTGTGAAGGAAAGAAACCATTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR CCA 72 bp AAATGGCTTTCCCCAAGGACAGAAGTCAAGAGCTTGTaGGGCCATATATTATCTAGTACTAGGCCATTCATT +
Preference number: 3 (lower is better)
Translates to: KWLSPRTEVKSL*GHILSSTRPFI
Trigger: AATGAATGGCCTAGTACTAGATAATATATGGCCCCACAAGCTCTTGACTTCTGTCCTTGGGGAAAGCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CAA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATATGCAGTAGTATGATCTaGGCTCACTGCAACTTCTAC +
Preference number: 3 (lower is better)
Translates to: DILIGNRGERWEKLLNLICSSMI*AHCNFY
Trigger: GTAGAAGTTGCAGTGAGCCAAGATCATACTACTGCA...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR-3UTR CAA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAACAGAAGTCAAGAGCTaGTGGGGCCATATATTATCT +
Preference number: 3 (lower is better)
Translates to: DILIGNRGERWEKLLNLITEVKS*WGHILS
Trigger: AGATAATATATGGCCCCACAAGCTCTTGACTTCTGT...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 72 bp ACTAAGTATATACCTACTCCCACCAAATCATCCACATaGCTCATCACTAAAGTTGTCCCTTGTATAATCTAC +
Preference number: 3 (lower is better)
Translates to: TKYIPTPTKSST*LITKVVPCIIY
Trigger: GTAGATTATACAAGGGACAACTTTAGTGATGAGGCATGTGGATGATTTGGTGGGAGTAGGTATATACTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR GCA 72 bp ATAAACTGCAGTTATTTGAGCAAACCAGAGCATATGTaGTGTTCAAATCCCACTTCACAATATACTTCAATC +
Preference number: 3 (lower is better)
Translates to: INCSYLSKPEHM*CSNPTSQYTSI
Trigger: GATTGAAGTATATTGTGAAGTGGGATTTGAACAGCACATATGCTCTGGTTTGCTCAAATAACTGCAGTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR CCA 72 bp GGTAACCAATTAGGATCTGTATCTTCAATAAACATCTaGAGAACGCAAATAGCATATATCACTATATGCCAT +
Preference number: 3 (lower is better)
Translates to: GNQLGSVSSINI*RTQIAYITICH
Trigger: ATGGCATATAGTGATATATGCTATTTGCGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGTTGGGTCCGGGAGCCTaGTCCGGACCCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRLGPGA*SGPAPR
Trigger: GCGGGGAGCGGGTCCGGAGCAGGCTCCCGGACCCAA...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564754.7
CDS-3UTR TCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGGGCCCTCCAGAGTTCTaGGGAGCAGTCCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRGPPEF*GAVHSG
Trigger: CCCGGAATGGACTGCTCCTCAGAACTCTGGAGGGCC...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGACGCCCCCTTCAGTTTTaGGTCCGGGAGCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRRPLQF*VREPAP
Trigger: CGGAGCAGGCTCCCGGACCCAAAACTGAAGGGGGCG...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564754.7
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTATGCCTGACCTTGAGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSMPDLE*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACTCAAGGTCAGGCAT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCCATGTCCCAAAGCTTaGTATGTGGCCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRPCPKA*YVALGS
Trigger: GGAGCCCAGGGCCACATACCAAGCTTTGGGACATGG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCAATCCCAGAGAGCATaGGGCACCATGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRQSQRA*GTMSQS
Trigger: GCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTATGCCTGACCTTGAGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAMPDLE*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACTCAAGGTCAGGCAT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGGCCAGGCAGAGTCTCTaGTCCACTCTTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRARQSL*STLLSQ
Trigger: CTGGGAAAGAAGAGTGGAGCAGAGACTCTGCCTGGC...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCACCAAAGCTTGGTATGTaGCCCTGGGCTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAPKLGM*PWAPPP
Trigger: TGGGGGAGGAGCCCAGGGCCACATACCAAGCTTTGG...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGGTTGTGAGCATGGACTaGCTGATCACTGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRVVSMD*LITGAT
Trigger: AGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAAC...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGATCTCTGACACTCTCCTaGTCCCGACCAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRSLTLS*SRPVLL
Trigger: CAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGA...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATCTCTGACACTCTCCTaGTCCCGACCAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERSLTLS*SRPVLL
Trigger: CAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAGCAAGACAGCTGACTaGCCGAGGGCCATGGCATTC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERSKTAD*PRAMAF
Trigger: GAATGCCATGGCCCTCGGGCAGTCAGCTGTCTTGCT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTATTGGGTCCGGGAGCCTaGTCCGGACCCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVLGPGA*SGPAPR
Trigger: GCGGGGAGCGGGTCCGGAGCAGGCTCCCGGACCCAA...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR CCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCAGGGGACGAGGAAATaGAAACACCTTCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRQGTRK*KHLPTG
Trigger: TCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGAAGAGAGGCTCCGGTaGGTGATGGAGACACATGGG +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSEERLR*VMETHG
Trigger: CCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGACCATGTCCCAAAGCTTaGTATGTGGCCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERPCPKA*YVALGS
Trigger: GGAGCCCAGGGCCACATACCAAGCTTTGGGACATGG...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTTGCGGCGGGCACTATTaGGGTTTGGCTCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSACGGHY*GLAQEG
Trigger: ACCTTCCTGAGCCAAACCTCAATAGTGCCCGCCGCA...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVRGSGG*WRHMGR
Trigger: TCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGGAGACGTGGTTATTTaGAGAGAGGCTCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERGDVVI*REAPVG
Trigger: ACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGATTTCGGGCACCTTCCTaGGCTGTAGCAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRFRAPS*AVARQL
Trigger: CAGCTGTCTTGCTACAGCTCAGGAAGGTGCCCGAAA...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATTTCGGGCACCTTCCTaGGCTGTAGCAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERFRAPS*AVARQL
Trigger: CAGCTGTCTTGCTACAGCTCAGGAAGGTGCCCGAAA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGGCCCTCCAGAGTTCTaGGGAGCAGTCCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYGPPEF*GAVHSG
Trigger: CCCGGAATGGACTGCTCCTCAGAACTCTGGAGGGCC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGACGCCCGGCCACGTTCTaGGTTTTGAGGATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERRPATF*VLRIQK
Trigger: TTTCTGGATCCTCAAAACTCAGAACGTGGCCGGGCG...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGACAATCCCAGAGAGCATaGGGCACCATGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERQSQRA*GTMSQS
Trigger: GCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTG...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAGGCGAGGGAGCTCCCTaGCGCCTCAGACGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTGEGAP*RLRRPL
Trigger: AAGGGGGCGTCTGAGGCGTCAGGGAGCTCCCTCGCC...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTAGCAAGACAGCTGACTaGCCGAGGGCCATGGCATTC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSASKTAD*PRAMAF
Trigger: GAATGCCATGGCCCTCGGGCAGTCAGCTGTCTTGCT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAGIFDG*HRSRHG
Trigger: GCCGTGCCTAGACCGATGGCAGCCATCGAATATTCC...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAGGCTACAGGGAACCTaGTCTGGGTGCTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERRLQGT*SGCSEG
Trigger: ACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGTGGGAAAAAGGGAGTaGGCAGCAGTGCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERVGKRE*AAVRHQ
Trigger: TTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCAC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATTCAGGCTGGTCAGCTaGAGAGTGGGGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERFRLVS*RVGFLL
Trigger: GAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGGCGAAGACAGACCTaGATGGTCTGCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRGRRQT*MVCNPR
Trigger: TCTGGGATTGCAGACCATCCAGGTCTGTCTTCGCCC...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCTTGTTCGAGGGATTTaGGTGTTCTCCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRLVRGI*VFSRGK
Trigger: TTTTCCCCTGGAGAACACTCAAATCCCTCGAACAAG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCCTTCGTTCTCGTGTaGGGCTACAGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVSFVLV*GYREPG
Trigger: ACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGA...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATTCTTCCCGGAGGTCTaGGTAACCAGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERFFPEV*VTRRQL
Trigger: TAACTGCCTCCTGGTTACTCAGACCTCCGGGAAGAA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGGCCCTCCAGAGTTCTaGGGAGCAGTCCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLGPPEF*GAVHSG
Trigger: CCCGGAATGGACTGCTCCTCAGAACTCTGGAGGGCC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGTTGTGAGCATGGACTaGCTGATCACTGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERVVSMD*LITGAT
Trigger: AGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAAC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGTGGAAAACACCCCGTaGGCCCAGAGGAATATTCGA +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSVENTP*AQRNIR
Trigger: TCGAATATTCCTCTGGGCTCACGGGGTGTTTTCCAC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCGCCCGGCCACGTTCTaGGTTTTGAGGATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVRPATF*VLRIQK
Trigger: TTTCTGGATCCTCAAAACTCAGAACGTGGCCGGGCG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGATGCCTGACCTTGAGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMMPDLE*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACTCAAGGTCAGGCAT...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTGCCAAACCTGCCCTTaGGGTTCTCAAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSCQTCP*GSQVPC
Trigger: ACAGGGAACTTGAGAACCTCAAGGGCAGGTTTGGCA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565380.5
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAGAGCAAGCAGAAGTTaGTCTGGAGCACACCCATGG +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERRASRS*SGAHPW
Trigger: CCATGGGTGTGCTCCAGAGCAACTTCTGCTTGCTCT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR GCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGATCTTCCAGCTGTAACTaGTCCACACACTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRSSSCN*STHSRL
Trigger: GAGCCGAGAGTGTGTGGAGCAGTTACAGCTGGAAGA...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGACAGACCTGGATGGTCTaGAATCCCAGAGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRQTWMV*NPREHE
Trigger: CTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTG...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAAGAAGTTCCCACAACTaGCCAACACCTCACCTACCC +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRRSSHN*PTPHLP
Trigger: GGGTAGGTGAGGTGTTGGGCAGTTGTGGGAACTTCT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAATCAGAAACCAAGGGTaGTGGAGCAGCTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERIRNQG*WSSSRA
Trigger: TGCCCTAGAGCTGCTCCAGCACCCTTGGTTTCTGAT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTTTCCAATCCCGCTGTaGAGGTCCACGATGATGCCA +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSFPIPL*RSTMMP
Trigger: TGGCATCATCGTGGACCTCCACAGCGGGATTGGAAA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCCCGGAACGTCCTCTTaGTCCACCACCATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAPGTSS*STTIPQ
Trigger: TTGAGGAATGGTGGTGGACCAAGAGGACGTTCCGGG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCTGCATCCGCTAAACTaGAGATCGCAAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVLHPLN*RSQGLR
Trigger: CCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAGGCTACAGGGAACCTaGTCTGGGTGCTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVRLQGT*SGCSEG
Trigger: ACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGTGGGAAAAAGGGAGTaGGCAGCAGTGCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAVGKRE*AAVRHQ
Trigger: TTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCAC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGCAGGGACACTGCCATaGGTTTGGAAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRAGTLP*VWKVGD
Trigger: GTCTCCTACTTTCCAAACCCATGGCAGTGTCCCTGC...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
3UTR CAA 72 bp GTCTCACACACAATTTCTGGGGGCTCACAGACCCTCTaGAAGCCTATCCATAAACCCCCTGGTGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VSHTISGGSQTL*KPIHKPPGEVP
Trigger: GGGGACTTCACCAGGGGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGCCCCCAGAAATTGTGTGTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGACGGGTTAGATCCCTCTaGAGTGAGGCAGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGRVRSL*SEAGKP
Trigger: TGGCTTTCCTGCCTCACTTCAGAGGGATCTAACCCG...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAAGGAGCTCTGTCCATaGTCACGCTGCTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSKELCP*SRCSQK
Trigger: TTTCTGAGAGCAGCGTGATCATGGACAGAGCTCCTT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAGGAGACGTGGTTATTTaGAGAGAGGCTCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGGDVVI*REAPVG
Trigger: ACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCC...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGATATCTGGCTCATCTCTaGCACTCTCCTGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGYLAHL*HSPAPD
Trigger: GTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATA...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTTCTTCCCGGAGGTCTaGGTAACCAGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVFFPEV*VTRRQL
Trigger: TAACTGCCTCCTGGTTACTCAGACCTCCGGGAAGAA...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGTTGTGAGCATGGACTaGCTGATCACTGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVVVSMD*LITGAT
Trigger: AGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAAC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGTGGAAAACACCCCGTaGGCCCAGAGGAATATTCGA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVVENTP*AQRNIR
Trigger: TCGAATATTCCTCTGGGCTCACGGGGTGTTTTCCAC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGTGGAAAACACCCCGTaGGCCCAGAGGAATATTCGA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAVENTP*AQRNIR
Trigger: TCGAATATTCCTCTGGGCTCACGGGGTGTTTTCCAC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCCCACTGAGGGTTTGTaGATTTGGCTGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSPTEGL*IWLFSV
Trigger: CACTGAGAACAGCCAAATTCACAAACCCTCAGTGGG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCCACGTTCTGAGTTTTaGGGATCCAGAAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRPRSEF*GSRNKR
Trigger: CCTTTTGTTTCTGGATCCTCAAAACTCAGAACGTGG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCCCTGCCCGATAGCCTaGGGGAAGACATGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSPCPIA*GKTCEW
Trigger: CCACTCACATGTCTTCCCTCAGGCTATCGGGCAGGG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCATCAGCAGTTCGAGTaGTGCCAGATAACAATTCTG +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRHQQFE*CQITIL
Trigger: CAGAATTGTTATCTGGCAGCACTCGAACTGCTGATG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTAGCTGTCTGAAGGGCTaGACGGGCTTGCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSASCLKG*TGLQKI
Trigger: AATCTTCTGCAAGCCCGTGCAGCCCTTCAGACAGCT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAGCTGTCTGAAGGGCTaGACGGGCTTGCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVSCLKG*TGLQKI
Trigger: AATCTTCTGCAAGCCCGTGCAGCCCTTCAGACAGCT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGACTTCAGACCCACTATTaGCTTTGGTTGGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERLQTHY*LWLALP
Trigger: GGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAG...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGCTCCCGACCAGTCCTaGTGTCTTCCCAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGAPDQS*CLPKWR
Trigger: CCTCCACTTGGGAAGACAGCAGGACTGGTCGGGAGC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGACCACAGTGCCATTTaGCAGTCCCGCATAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSADHSAI*QSRIED
Trigger: ATCCTCTATGCGGGACTGGCAAATGGCACTGTGGTC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACAGCAAGACAGCTGACTaGCCGAGGGCCATGGCATTC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYSKTAD*PRAMAF
Trigger: GAATGCCATGGCCCTCGGGCAGTCAGCTGTCTTGCT...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTATCAGAAACCAAGGGTaGTGGAGCAGCTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAIRNQG*WSSSRA
Trigger: TGCCCTAGAGCTGCTCCAGCACCCTTGGTTTCTGAT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCCCTGTGATGCAACATaGTCCGCATGTGTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAPCDAT*SACVRP
Trigger: TGGACGAACACATGCGGAGCATGTTGCATCACAGGG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR CCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAAGGCTACAGGGAACCTaGTCTGGGTGCTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGRLQGT*SGCSEG
Trigger: ACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAGGCTCCAGAAAAAGTaGGAAAAAGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSRLQKK*EKGSGQ
Trigger: CTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTGCTGTCTTCCCAAGTaGAGGTTGTTACTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSCCLPK*RLLLSP
Trigger: GGGGGAAAGTAACAACCTCCACTTGGGAAGACAGCA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAGGATGGTATGGTCACTaGACCCGGTGTAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGGWYGH*TRCKGQ
Trigger: CTGCCCTTTACACCGGGTCCAGTGACCATACCATCC...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCATTATAGCAGCGGATaGTATGGTCACTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVHYSSG*YGHWTR
Trigger: CCGGGTCCAGTGACCATACCATCCGCTGCTATAATG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAACTGCCCGAGGGCCATaGCATTCAAAGATCTCAAGT +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERTARGP*HSKISS
Trigger: ACTTGAGATCTTTGAATGCCATGGCCCTCGGGCAGT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTACTGCCCGAGGGCCATaGCATTCAAAGATCTCAAGT +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSTARGP*HSKISS
Trigger: ACTTGAGATCTTTGAATGCCATGGCCCTCGGGCAGT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCCAGAAACAAAAGGCTaGAAAGCGACACTTCTACAG +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRPETKG*KATLLQ
Trigger: CTGTAGAAGTGTCGCTTTCCAGCCTTTTGTTTCTGG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCCATGTTGGCCAGGCTaGTCTGCAACTCCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYPCWPG*SATPSL
Trigger: GAGGCTAGGAGTTGCAGACCAGCCTGGCCAACATGG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCTTGGTATGTGGCCCTaGGCTCCTCCCCCAATTTTA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVLGMWP*APPPIL
Trigger: TAAAATTGGGGGAGGAGCCCAGGGCCACATACCAAG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGCCAAAGCTTGGTATGTaGCCCTGGGCTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGPKLGM*PWAPPP
Trigger: TGGGGGAGGAGCCCAGGGCCACATACCAAGCTTTGG...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGAAGACAGACCTGGATaGTCTGCAATCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVEDRPG*SAIPES
Trigger: GCTCTCTGGGATTGCAGACCATCCAGGTCTGTCTTC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAGGGCGAAGACAGACCTaGATGGTCTGCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGGRRQT*MVCNPR
Trigger: TCTGGGATTGCAGACCATCCAGGTCTGTCTTCGCCC...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCACACTCGGCACTCATaGCTAATGTCCCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAHTRHS*LMSLGK
Trigger: TTTCCCTAGGGACATTAGTCATGAGTGCCGAGTGTG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCAAAGACCCACTTCTGTaGCCCCGCACACTCGGCACT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSKDPLL*PRTLGT
Trigger: AGTGCCGAGTGTGCGGGGTCACAGAAGTGGGTCTTT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCTCTCCTGGGAATTCTaGTTCTCTGACGGTGGTATA +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSLSWEF*FSDGGI
Trigger: TATACCACCGTCAGAGAATCAGAATTCCCAGGAGAG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGGCCCTCCAGAGTTCTaGGGAGCAGTCCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVGPPEF*GAVHSG
Trigger: CCCGGAATGGACTGCTCCTCAGAACTCTGGAGGGCC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGATGCCTGACCTTGAGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEMPDLE*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACTCAAGGTCAGGCAT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTGGAGTGCAGTAGTATaGTCTTGGCTCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSWSAVV*SWLTAT
Trigger: AGTTGCAGTGAGCCAAGATCATACTACTGCACTCCA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCATTTTCCCGGGAAATaGCCATTCCCAAACCCACAG +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVHFPGK*PFPNPQ
Trigger: CTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAGGGCTGCACGGGCTTaGAGAAGATTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVRAARA*RRLLSM
Trigger: CATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTAGGGCTGCACGGGCTTaGAGAAGATTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSARAARA*RRLLSM
Trigger: CATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGCTCCCGACCAGTCCTaGTGTCTTCCCAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLAPDQS*CLPKWR
Trigger: CCTCCACTTGGGAAGACAGCAGGACTGGTCGGGAGC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCACAGTCTGAGTTTCTaGCACACTTACAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAHSLSF*HTYRDA
Trigger: GGCATCCCTGTAAGTGTGGCAGAAACTCAGACTGTG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGCCAGGCAGAGTCTCTaGTCCACTCTTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYARQSL*STLLSQ
Trigger: CTGGGAAAGAAGAGTGGAGCAGAGACTCTGCCTGGC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGTGAGTGGATATATGTaGACTAACAGGGGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSVSGYM*TNRGED
Trigger: GTCTTCGCCCCTGTTAGTGCACATATATCCACTCAC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGATCGCCCAGGCTGGAGTaGAGTAGTATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGSPRLE*SSMILA
Trigger: AGCCAAGATCATACTACTGCACTCCAGCCTGGGCGA...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGTTATCTTCCACAGTaGGCTTGTTCGAGGGATTTG +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRGYLPQ*ACSRDL
Trigger: CAAATCCCTCGAACAAGCCCACTGTGGAAGATAACC...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGGCACTATTGAGGTTTaGCTCAGGAAGGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAGTIEV*LRKVYS
Trigger: GGAGTACACCTTCCTGAGCCAAACCTCAATAGTGCC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGGAATCCTTCTAGACTaGACAGATCAGGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERGILLD*TDQVPH
Trigger: ATGGGGAACCTGATCTGTCCAGTCTAGAAGGATTCC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGGTATAGACCTCTCCTaGCTGTTCAAGTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSGIDLS*LFKSFA
Trigger: GGCAAAAGACTTGAACAGCCAGGAGAGGTCTATACC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAGGCTCCAGAAAAAGTaGGAAAAAGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVRLQKK*EKGSGQ
Trigger: CTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAATTGCAGGCAGAGCTTaGTGGCACAGCATTCACATT +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERIAGRA*WHSIHI
Trigger: AATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAAT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAGACGAGTCACTATCTaGCTCATCTCTGACACTCTC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERRRVTI*LISDTL
Trigger: GAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGCATTTACGGCAGCTTaGTGTCCCTCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAAFTAA*CPSKLP
Trigger: AGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGCATTTACGGCAGCTTaGTGTCCCTCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVAFTAA*CPSKLP
Trigger: AGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAA +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAIQWER*RLATEQ
Trigger: TTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTAT...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCCATGTCCCAAAGCTTaGTATGTGGCCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSPCPKA*YVALGS
Trigger: GGAGCCCAGGGCCACATACCAAGCTTTGGGACATGG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGCCGTAGGGTTGGCTTaGGCCCAGACTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTAVGLA*AQTPSL
Trigger: CAGAGAAGGAGTCTGGGCTCAAGCCAACCCTACGGC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGGAATTCTGATTCTCTaGCGGTGGTATAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVGILIL*RWYRPL
Trigger: GAGAGGTCTATACCACCGTCAGAGAATCAGAATTCC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTCCTTCGTTCTCGTGTaGGGCTACAGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSSFVLV*GYREPG
Trigger: ACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLRGSGG*WRHMGR
Trigger: TCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCT...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGGAGACGTGGTTATTTaGAGAGAGGCTCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGGDVVI*REAPVG
Trigger: ACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGATCCCCTAGTCTCAGCTaGTGTCAAAGTGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGSPSLS*CQSGFC
Trigger: GCAGAATCCACTTTGACATCAGCTGAGACTAGGGGA...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTATCTGGCTCATCTCTaGCACTCTCCTGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSYLAHL*HSPAPD
Trigger: GTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTTTCGGGCACCTTCCTaGGCTGTAGCAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGFRAPS*AVARQL
Trigger: CAGCTGTCTTGCTACAGCTCAGGAAGGTGCCCGAAA...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTTTCGGGCACCTTCCTaGGCTGTAGCAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSFRAPS*AVARQL
Trigger: CAGCTGTCTTGCTACAGCTCAGGAAGGTGCCCGAAA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGTTGTGAGCATGGACTaGCTGATCACTGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYVVSMD*LITGAT
Trigger: AGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAAC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTATGGAGGCTGGCAACTaGACAAACCAAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAMEAGN*TNQKGS
Trigger: TGAACCCTTTTGGTTTGTTCAGTTGCCAGCCTCCAT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCCACGTTCTGAGTTTTaGGGATCCAGAAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSPRSEF*GSRNKR
Trigger: CCTTTTGTTTCTGGATCCTCAAAACTCAGAACGTGG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACCTCCAGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCTGGAGG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCCTCCAGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCTGGAGG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGGCGAGGGAGCTCCCTaGCGCCTCAGACGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGGEGAP*RLRRPL
Trigger: AAGGGGGCGTCTGAGGCGTCAGGGAGCTCCCTCGCC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGATGCATTTAGAATCTaGCGTAGGGTTGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSADAFRI*RRVGLS
Trigger: GCTCAAGCCAACCCTACGGCAGATTCTAAATGCATC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCACCTTTGCCCAGCTCTTaGTTTTTCTTGGTTACTTGC +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAPLPSS*FFLVTC
Trigger: GCAAGTAACCAAGAAAAAGCAAGAGCTGGGCAAAGG...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTACTTCTTGTTTGAGGTaGATGGTTGCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSTSCLR*MVAFWL
Trigger: GAGCCAGAAAGCAACCATGCACCTCAAACAAGAAGT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAACTTCTTGTTTGAGGTaGATGGTTGCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERTSCLR*MVAFWL
Trigger: GAGCCAGAAAGCAACCATGCACCTCAAACAAGAAGT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGGAACCTGGTCTGGGTaGTCAGAAGGTTCATATGTT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVGTWSG*SEGSYV
Trigger: AACATATGAACCTTCTGAGCACCCAGACCAGGTTCC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGGAGTGGGCAGCAGTaGGGCATCAATGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGSGQQ*GINGCL
Trigger: CAAACATCCATTGATGCCGCACTGCTGCCCACTCCC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATGCAAAGAATGGTTTTaGTATGGCCCTCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERCKEWF*YGPPEF
Trigger: GAACTCTGGAGGGCCATAGCAAAACCATTCTTTGCA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTGCAAAGAATGGTTTTaGTATGGCCCTCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSCKEWF*YGPPEF
Trigger: GAACTCTGGAGGGCCATAGCAAAACCATTCTTTGCA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGCCAGGCAGAGTCTCTaGTCCACTCTTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGARQSL*STLLSQ
Trigger: CTGGGAAAGAAGAGTGGAGCAGAGACTCTGCCTGGC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGTGAGTGGATATATGTaGACTAACAGGGGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVVSGYM*TNRGED
Trigger: GTCTTCGCCCCTGTTAGTGCACATATATCCACTCAC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAGTCATCGATCCAGATaGATTTTCCCGGGAAATGAC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSSHRSR*IFPGND
Trigger: GTCATTTCCCGGGAAAATGCATCTGGATCGATGACT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCACACAAAGCCACTAAATaGCAGAGTCAACACAGATCC +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAHKATK*QSQHRS
Trigger: GGATCTGTGTTGACTCTGGCATTTAGTGGCTTTGTG...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACCCGGAACGTCCTCTTaGTCCACCACCATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLPGTSS*STTIPQ
Trigger: TTGAGGAATGGTGGTGGACCAAGAGGACGTTCCGGG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCGTGTTTCATCAGTTTaGGGCTCCTGTATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSRVSSV*GSCIPV
Trigger: TACAGGAATACAGGAGCCCCAAACTGATGAAACACG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGCACTATGTCGCCTTTaGGTAGCAACATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAALCRL*VATFSA
Trigger: GGCTGAAAATGTTGCTACCCAAAGGCGACATAGTGC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCTGCATCCGCTAAACTaGAGATCGCAAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMLHPLN*RSQGLR
Trigger: CCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAGGCTACAGGGAACCTaGTCTGGGTGCTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGRLQGT*SGCSEG
Trigger: ACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCAGTGCGGCATCAATaGATGTTTGAGATCTACTGT +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSAVRHQ*MFEIYC
Trigger: ACAGTAGATCTCAAACATCCATTGATGCCGCACTGC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGCAGGGACACTGCCATaGGTTTGGAAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYAGTLP*VWKVGD
Trigger: GTCTCCTACTTTCCAAACCCATGGCAGTGTCCCTGC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCTTCCAGTAATTCCTTaGACACATTGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVLPVIP*THCRQS
Trigger: GCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGGAAAACTTCAGTTCTTaGCTAGGCTCATGGAAACTT +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRENFSS*LGSWKL
Trigger: AAGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTC...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATTCAGGCTGGTCAGCTaGAGAGTGGGGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLFRLVS*RVGFLL
Trigger: GAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAA...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCTATTCTCAGGAACATaGGCAGCCCGTAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSALFSGT*AARRLF
Trigger: GAAAAGTCTACGGGCTGCCCATGTTCCTGAGAATAG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCAAAGCTTCCTTCTGTaGGTTCATCATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSQSFLL*VHHHLL
Trigger: CAGGAGATGATGATGAACCCACAGAAGGAAGCTTTG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCATTCGCCATCTACTGTaGAGGCAGAGGACCCGGTCT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSIRHLL*RQRTRS
Trigger: AGACCGGGTCCTCTGCCTCCACAGTAGATGGCGAAT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAIQWER*RLATEQ
Trigger: TTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTAT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGACCAGAAACAAAAGGCTaGAAAGCGACACTTCTACAG +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERPETKG*KATLLQ
Trigger: CTGTAGAAGTGTCGCTTTCCAGCCTTTTGTTTCTGG...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGGGCGAAGACAGACCTaGATGGTCTGCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLGRRQT*MVCNPR
Trigger: TCTGGGATTGCAGACCATCCAGGTCTGTCTTCGCCC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGATGTTATTGTTTCCTCTaGAGGACACTGCACACTTTG +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRCYCFL*RTLHTL
Trigger: CAAAGTGTGCAGTGTCCTTCAGAGGAAACAATAACA...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATGTTATTGTTTCCTCTaGAGGACACTGCACACTTTG +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERCYCFL*RTLHTL
Trigger: CAAAGTGTGCAGTGTCCTTCAGAGGAAACAATAACA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000565611.5
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCGGGTTAGATCCCTCTaGAGTGAGGCAGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLRVRSL*SEAGKP
Trigger: TGGCTTTCCTGCCTCACTTCAGAGGGATCTAACCCG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACAAGGAGCTCTGTCCATaGTCACGCTGCTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYKELCP*SRCSQK
Trigger: TTTCTGAGAGCAGCGTGATCATGGACAGAGCTCCTT...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCGTGTCACTTCTTGTTTaGGGTGCATGGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVVSLLV*GAWLLS
Trigger: AGAAAGCAACCATGCACCTCAAACAAGAAGTGACAC...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERASMDV*DLLFLR
Trigger: ACGAAGGAACAGTAGATCTCAAACATCCATTGATGC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLERGSGG*WRHMGR
Trigger: TCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVRGSGG*WRHMGR
Trigger: TCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACTCCCCTAGTCTCAGCTaGTGTCAAAGTGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYSPSLS*CQSGFC
Trigger: GCAGAATCCACTTTGACATCAGCTGAGACTAGGGGA...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAGAGGAGATCACAGTCTaGGTTTCTGCCACACTTACA +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGEEITV*VSATLT
Trigger: TGTAAGTGTGGCAGAAACTCAGACTGTGATCTCCTC...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCTGAGGGAAGACATGTaGGTGGATATATGTGCACTA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVLREDM*VDICAL
Trigger: TAGTGCACATATATCCACTCACATGTCTTCCCTCAG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCCTCCAGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCTGGAGG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCACACTCGGCACTCATaGCTAATGTCCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLHTRHS*LMSLPL
Trigger: CAAGGGCAGGGACATTAGTCATGAGTGCCGAGTGTG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564754.7
CDS-3UTR GCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGATCCTCTGAAGGACACTaGACACTTTGGCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGSSEGH*TLWHSE
Trigger: TTCACTGTGCCAAAGTGTGCAGTGTCCTTCAGAGGA...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCCTTTGCCCAGCTCTTaGTTTTTCTTGGTTACTTGC +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVPLPSS*FFLVTC
Trigger: GCAAGTAACCAAGAAAAAGCAAGAGCTGGGCAAAGG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAGGGGTACCATTTCTATaGCAAACCTGGGTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGGVPFL*QTWVSL
Trigger: AAGGCTTACCCAGGTTTGGCATAGAAATGGTACCCC...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCTAGGTGAAACCATCTaGTGGGGCTCATTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSALGETI*WGSFSL
Trigger: CAAAGAAAATGAGCCCCAGCAGATGGTTTCACCTAG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAGCTGTCTGAAGGGCTaGACGGGCTTGCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGSCLKG*TGLQKI
Trigger: AATCTTCTGCAAGCCCGTGCAGCCCTTCAGACAGCT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAAGCTGTCTGAAGGGCTaGACGGGCTTGCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLSCLKG*TGLQKI
Trigger: AATCTTCTGCAAGCCCGTGCAGCCCTTCAGACAGCT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTCCATAGTTATCTGCTaGTTGAGCATAAGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSSIVIC*LSISSL
Trigger: GAGGCTACTTATGCTCAAGCAGCAGATAACTATGGA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCATCTATGGGTCCTCAGTaGACTCATCTCCATAGTTAT +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAASMGPQ*THLHSY
Trigger: ATAACTATGGAGATGAGTGCACTGAGGACCCATAGA...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTCTATGGGTCCTCAGTaGACTCATCTCCATAGTTAT +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSSMGPQ*THLHSY
Trigger: ATAACTATGGAGATGAGTGCACTGAGGACCCATAGA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACATCTCTGACACTCTCCTaGTCCCGACCAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTSLTLS*SRPVLL
Trigger: CAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGA...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTTCGTTCAATATGTCCTaGAGCATCCTGTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSASFNMS*SILFGS
Trigger: GGATCCAAACAGGATGCTGCAGGACATATTGAACGA...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGACGATCTCAGCTTACTaGAATCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGTISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGATTGCAGTAAGCTGAGATCGT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCACCTACCCGTTTCCTaGTGCACAAAGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYHLPVS*CTKSPS
Trigger: TGAAGGAGACTTTGTGCAGCAGGAAACGGGTAGGTG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAAGAAGTTCCCACAACTaGCCAACACCTCACCTACCC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLRSSHN*PTPHLP
Trigger: GGGTAGGTGAGGTGTTGGGCAGTTGTGGGAACTTCT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAAGCAGAAGTTGCTCTaGAGCACACCCATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGKQKLL*STPMVP
Trigger: TGGCACCATGGGTGTGCTCCAGAGCAACTTCTGCTT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTTCTCCCCACTGGCATaGCACACTCACCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSFSPLA*HTHQIC
Trigger: ACAGATCTGGTGAGTGTGCCATGCCAGTGGGGAGAA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCAGGTTTTTCTGCAGTaGGGCACTGTCTCACCACCT +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMQVFLQ*GTVSPP
Trigger: AGGTGGTGAGACAGTGCCCCACTGCAGAAAAACCTG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCTGCATCCGCTAAACTaGAGATCGCAAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLHPLN*RSQGLR
Trigger: CCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGAAGAGAGGCTCCGGTaGGTGATGGAGACACATGGG +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEEERLR*VMETHG
Trigger: CCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAGCAGGGACACTGCCATaGGTTTGGAAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEAGTLP*VWKVGD
Trigger: GTCTCCTACTTTCCAAACCCATGGCAGTGTCCCTGC...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAATCTTAGAAAAGAACTaGTACAGGCTTCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRILEKN*YRLQTH
Trigger: GTGGGTCTGAAGCCTGTACCAGTTCTTTTCTAAGAT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGCATTATAGCAGCGGATaGTATGGTCACTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGHYSSG*YGHWTR
Trigger: CCGGGTCCAGTGACCATACCATCCGCTGCTATAATG...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAAGAATGGTTTTGCTATaGCCCTCCAGAGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGRMVLL*PSRVLR
Trigger: CCTCAGAACTCTGGAGGGCCATAGCAAAACCATTCT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCCTTCATGCAAAGAATaGTTTTGCTATGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAPSCKE*FCYGPP
Trigger: TGGAGGGCCATAGCAAAACCATTCTTTGCATGAAGG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACCATGTTGGCCAGGCTaGTCTGCAACTCCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTPCWPG*SATPSL
Trigger: GAGGCTAGGAGTTGCAGACCAGCCTGGCCAACATGG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACCATGTTGGCCAGGCTaGTCTGCAACTCCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVPCWPG*SATPSL
Trigger: GAGGCTAGGAGTTGCAGACCAGCCTGGCCAACATGG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCTTGGTATGTGGCCCTaGGCTCCTCCCCCAATTTTA +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSLGMWP*APPPIL
Trigger: TAAAATTGGGGGAGGAGCCCAGGGCCACATACCAAG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACCAAAGCTTGGTATGTaGCCCTGGGCTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKPKLGM*PWAPPP
Trigger: TGGGGGAGGAGCCCAGGGCCACATACCAAGCTTTGG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTAATAGGGGTGAGAGGTaGGAAAAGCTTCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSANRGER*EKLLNL
Trigger: GAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCGCCCCCTTCAGTTTTaGGTCCGGGAGCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVRPLQF*VREPAP
Trigger: CGGAGCAGGCTCCCGGACCCAAAACTGAAGGGGGCG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAAGGGAAAGAGGGAGATaGGGGACATTCAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLRERGR*GTFNSP
Trigger: GGGAGAATTGAATGTCCCTCATCTCCCTCTTTCCCT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTTTTTGCAATGACTCATaGCACTGTAGCACCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAFCNDS*HCSTSL
Trigger: CAAAGAGGTGCTACAGTGTCATGAGTCATTGCAAAA...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAAAGGAGCTCTGTCCATaGTCACGCTGCTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLKELCP*SRCSQK
Trigger: TTTCTGAGAGCAGCGTGATCATGGACAGAGCTCCTT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGGAATTCTGATTCTCTaGCGGTGGTATAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYGILIL*RWYRPL
Trigger: GAGAGGTCTATACCACCGTCAGAGAATCAGAATTCC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTATCCTTCGTTCTCGTGTaGGGCTACAGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVSFVLV*GYREPG
Trigger: ACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGA...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKRGSGG*WRHMGR
Trigger: TCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGCTAGAAAGACCAGCTaGTTGGGAAGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGARKTS*LGRGRV
Trigger: AACTCTCCCTCTTCCCAATCAGCTGGTCTTTCTAGC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCCTAGTCTCAGCTaGTGTCAAAGTGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLSPSLS*CQSGFC
Trigger: GCAGAATCCACTTTGACATCAGCTGAGACTAGGGGA...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACATATCTGGCTCATCTCTaGCACTCTCCTGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTYLAHL*HSPAPD
Trigger: GTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATA...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTATCTGGCTCATCTCTaGCACTCTCCTGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTYLAHL*HSPAPD
Trigger: GTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGCTACTACTTCTAACTaGGGATTAGGAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERATTSN*GLGISR
Trigger: CCTAGAAATTCCTAATCCTCAGTTAGAAGTAGTAGC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGGCCCTCCAGAGTTCTaGGGAGCAGTCCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVGPPEF*GAVHSG
Trigger: CCCGGAATGGACTGCTCCTCAGAACTCTGGAGGGCC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGATCACTGGAGCCACTaGACACGAGATCATTCACCA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLDHWSH*TRDHSP
Trigger: TGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCGCACTGCCTCACACTaGGCTTTCTATCCACATTTA +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYRTASH*AFYPHL
Trigger: TAAATGTGGATAGAAAGCTCAGTGTGAGGCAGTGCG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACAGCTAGCAGGGAAGTaGAGGCAAAGAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLQLAGK*RQRTVS
Trigger: TGAGACAGTTCTTTGCCTTCACTTCCCTGCTAGCTG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCGCCCGGCCACGTTCTaGGTTTTGAGGATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLERPATF*VLRIQK
Trigger: TTTCTGGATCCTCAAAACTCAGAACGTGGCCGGGCG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGACTGAGGGAAGACATGTaGGTGGATATATGTGCACTA +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGLREDM*VDICAL
Trigger: TAGTGCACATATATCCACTCACATGTCTTCCCTCAG...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGCTCACAGACCCTCTTaGAGCCTATCCATAAACCCC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLAHRPS*SLSINP
Trigger: GGGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCCTGCAACACCCTTATaGCACCCGGAACGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTPATPL*HPERPL
Trigger: AAGAGGACGTTCCGGGTGGCATAAGGGTGTTGCAGG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAAAGGCTTCGCTTTCTTaGCAAGCCAGGGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVKASLS*QARGRG
Trigger: TCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTTTGAGGTGCATGGTTaGTTTCTGGCTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSFEVHG*FLALSS
Trigger: GCTGGACAGAGCCAGAAAGCAACCATGCACCTCAAA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCAGGGCTGCACGGGCTTaGAGAAGATTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSRAARA*RRLLSM
Trigger: CATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAGGGAGTGGGCAGCAGTaGGGCATCAATGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTGSGQQ*GINGCL
Trigger: CAAACATCCATTGATGCCGCACTGCTGCCCACTCCC...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGGGAGTGGGCAGCAGTaGGGCATCAATGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEGSGQQ*GINGCL
Trigger: CAAACATCCATTGATGCCGCACTGCTGCCCACTCCC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCCACACTTACAGGGATaGCATCTTTATAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYPHLQG*HLYSEC
Trigger: GCACTCGCTATAAAGATGGCATCCCTGTAAGTGTGG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCCCAAATATCTGAATTaGATTTACGGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVPKYLN*IYGSLV
Trigger: CACCAAGCTGCCGTAAATGCAATTCAGATATTTGGG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVGIFDG*HRSRHG
Trigger: GCCGTGCCTAGACCGATGGCAGCCATCGAATATTCC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGAAAACTGTATTCAGATaGTTTATTCTAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRKTVFR*FILTPS
Trigger: AGAGGGGGTTAGAATAAAGCATCTGAATACAGTTTT...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGCCAGGCAGAGTCTCTaGTCCACTCTTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTARQSL*STLLSQ
Trigger: CTGGGAAAGAAGAGTGGAGCAGAGACTCTGCCTGGC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACATTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCATCATCTTCTCTTTCCTaGGCATCAACGTTATCTTTG +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAASSSLS*ASTLSL
Trigger: CAAAGATAACGTTGATGCCCAGGAAAGAGAAGATGA...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATTTCTTGGTTGCTATTaGAAGGTTCATCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERFLGCY*KVHLVD
Trigger: GTCGACAAGATGAACCTTCCAATAGCAACCAAGAAA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGAGGCTCCAGAAAAAGTaGGAAAAAGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMRLQKK*EKGSGQ
Trigger: CTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCT...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGGTGATGGAGACACATaGGAAGATGGAGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLGDGDT*EDGGSR
Trigger: TCTGGAGCCTCCATCTTCCCATGTGTCTCCATCACC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGAAGAGAGGCTCCGGTaGGTGATGGAGACACATGGG +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKEERLR*VMETHG
Trigger: CCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCTTCCAGTAATTCCTTaGACACATTGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYLPVIP*THCRQS
Trigger: GCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTTCTTGGCTAGGCTCATaGAAACTTTCTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSASWLGS*KLSVDS
Trigger: AGAGTCAACAGAAAGTTTCCATGAGCCTAGCCAAGA...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCATCTTAGAAAAGAACTaGTACAGGCTTCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVILEKN*YRLQTH
Trigger: GTGGGTCTGAAGCCTGTACCAGTTCTTTTCTAAGAT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACATGGTCAGCTGGAGAGTaGGGTTCCTTCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTWSAGE*GSFSKG
Trigger: CCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCA...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGTGGTCAGCTGGAGAGTaGGGTTCCTTCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEWSAGE*GSFSKG
Trigger: CCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCA...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGTTCAGGCTGGTCAGCTaGAGAGTGGGGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEFRLVS*RVGFLL
Trigger: GAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAA...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTGCTGTCTTCCCAAGTaGAGGTTGTTACTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSCCLPK*RLLLSP
Trigger: GGGGGAAAGTAACAACCTCCACTTGGGAAGACAGCA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGGATGGTATGGTCACTaGACCCGGTGTAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVGWYGH*TRCKGQ
Trigger: CTGCCCTTTACACCGGGTCCAGTGACCATACCATCC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGATTCGCCATCTACTGTaGAGGCAGAGGACCCGGTCT +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEIRHLL*RQRTRS
Trigger: AGACCGGGTCCTCTGCCTCCACAGTAGATGGCGAAT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGGGCGAAGACAGACCTaGATGGTCTGCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTGRRQT*MVCNPR
Trigger: TCTGGGATTGCAGACCATCCAGGTCTGTCTTCGCCC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCTAGAACCGTTCATTTaGGGTAACACACTAATCTGG +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSALEPFI*GNTLIW
Trigger: CCAGATTAGTGTGTTACCCCAAATGAACGGTTCTAG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAAGAAACCAAGGGTGCTaGAGCAGCTCTAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTERNQGC*SSSRAY
Trigger: ATATGCCCTAGAGCTGCTCCAGCACCCTTGGTTTCT...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTACTGCTCCACTATTTaGAAGCCAACCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSYCSTI*KPTTSR
Trigger: TCTGGAGGTGGTTGGCTTTCAAATAGTGGAGCAGTA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGCCGTAGGGTTGGCTTaGGCCCAGACTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVAVGLA*AQTPSL
Trigger: CAGAGAAGGAGTCTGGGCTCAAGCCAACCCTACGGC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGAAGGAGCTCTGTCCATaGTCACGCTGCTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLKELCP*SRCSQK
Trigger: TTTCTGAGAGCAGCGTGATCATGGACAGAGCTCCTT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGGAATTCTGATTCTCTaGCGGTGGTATAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGGILIL*RWYRPL
Trigger: GAGAGGTCTATACCACCGTCAGAGAATCAGAATTCC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGAATTCTGATTCTCTaGCGGTGGTATAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGILIL*RWYRPL
Trigger: GAGAGGTCTATACCACCGTCAGAGAATCAGAATTCC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGCTCTCCTGGGAATTCTaGTTCTCTGACGGTGGTATA +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGLSWEF*FSDGGI
Trigger: TATACCACCGTCAGAGAATCAGAATTCCCAGGAGAG...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACTCTCCTGGGAATTCTaGTTCTCTGACGGTGGTATA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLLSWEF*FSDGGI
Trigger: TATACCACCGTCAGAGAATCAGAATTCCCAGGAGAG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDRGSGG*WRHMGR
Trigger: TCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCT...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGGAGACGTGGTTATTTaGAGAGAGGCTCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKGDVVI*REAPVG
Trigger: ACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGCTACTACTTCTAACTaGGGATTAGGAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAATTSN*GLGISR
Trigger: CCTAGAAATTCCTAATCCTCAGTTAGAAGTAGTAGC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTTAACTTTGGAGGTATaGCCCTCAAAGACACCAATA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVLTLEV*PSKTPI
Trigger: TATTGGTGTCTTTGAGGGTCATACCTCCAAAGTTAA...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCATGGAGGCTGGCAACTaGACAAACCAAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSMEAGN*TNQKGS
Trigger: TGAACCCTTTTGGTTTGTTCAGTTGCCAGCCTCCAT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTGGAAAACACCCCGTaGGCCCAGAGGAATATTCGA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEVENTP*AQRNIR
Trigger: TCGAATATTCCTCTGGGCTCACGGGGTGTTTTCCAC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCCCACTGAGGGTTTGTaGATTTGGCTGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLPTEGL*IWLFSV
Trigger: CACTGAGAACAGCCAAATTCACAAACCCTCAGTGGG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACGCCCGGCCACGTTCTaGGTTTTGAGGATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKRPATF*VLRIQK
Trigger: TTTCTGGATCCTCAAAACTCAGAACGTGGCCGGGCG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACAATCCCAGAGAGCATaGGGCACCATGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKQSQRA*GTMSQS
Trigger: GCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCCCTGCCCGATAGCCTaGGGGAAGACATGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVPCPIA*GKTCEW
Trigger: CCACTCACATGTCTTCCCTCAGGCTATCGGGCAGGG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCCCTGCCCGATAGCCTaGGGGAAGACATGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTPCPIA*GKTCEW
Trigger: CCACTCACATGTCTTCCCTCAGGCTATCGGGCAGGG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAGCTCACAGACCCTCTTaGAGCCTATCCATAAACCCC +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTAHRPS*SLSINP
Trigger: GGGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGC...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTGGAGTGCAGTAGTATaGTCTTGGCTCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGWSAVV*SWLTAT
Trigger: AGTTGCAGTGAGCCAAGATCATACTACTGCACTCCA...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAACTGCTTTATAAACTaGGTAGAGACGTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERNCFIN*VETYAK
Trigger: TTTGGCATACGTCTCTACTCAGTTTATAAAGCAGTT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGGGTACCATTTCTATaGCAAACCTGGGTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGVPFL*QTWVSL
Trigger: AAGGCTTACCCAGGTTTGGCATAGAAATGGTACCCC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGTTCAAGTCTTTTaGCAAATGCATCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSAVQVF*QMHQRY
Trigger: ATACCTTTGATGCATTTGGCAAAAGACTTGAACAGC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGGAACCTGGTCTGGGTaGTCAGAAGGTTCATATGTT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGGTWSG*SEGSYV
Trigger: AACATATGAACCTTCTGAGCACCCAGACCAGGTTCC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGGGAGTGGGCAGCAGTaGGGCATCAATGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKGSGQQ*GINGCL
Trigger: CAAACATCCATTGATGCCGCACTGCTGCCCACTCCC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCTTCAGACCCACTATTaGCTTTGGTTGGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLQTHY*LWLALP
Trigger: GGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAATGTCAAAGTGGATTCTaGCTGTTGTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTECQSGF*LLFRLV
Trigger: GACCAGCCTGAACAACAGGCAGAATCCACTTTGACA...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTGTCAAAGTGGATTCTaGCTGTTGTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSCQSGF*LLFRLV
Trigger: GACCAGCCTGAACAACAGGCAGAATCCACTTTGACA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTGTCAAAGTGGATTCTaGCTGTTGTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGCQSGF*LLFRLV
Trigger: GACCAGCCTGAACAACAGGCAGAATCCACTTTGACA...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGCTCCCGACCAGTCCTaGTGTCTTCCCAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVAPDQS*CLPKWR
Trigger: CCTCCACTTGGGAAGACAGCAGGACTGGTCGGGAGC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGTTTCTAGTGGGTTTTaGTCTGTAGAGTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSVSSGF*SVEFQI
Trigger: TATTTGGAACTCTACAGAGCAAAACCCACTAGAAAC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGTTTCTAGTGGGTTTTaGTCTGTAGAGTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERVSSGF*SVEFQI
Trigger: TATTTGGAACTCTACAGAGCAAAACCCACTAGAAAC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTCTTCCAGCTGTAACTaGTCCACACACTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTSSSCN*STHSRL
Trigger: GAGCCGAGAGTGTGTGGAGCAGTTACAGCTGGAAGA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAATTCACCACAGTCACTaGATGATTGTGACCTTTATA +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERIHHSH*MIVTFI
Trigger: TATAAAGGTCACAATCATGCAGTGACTGTGGTGAAT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGACGATCTCAGCTTACTaGAATCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLETISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGATTGCAGTAAGCTGAGATCGT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACGATCTCAGCTTACTaGAATCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVTISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGATTGCAGTAAGCTGAGATCGT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACAGACCTGGATGGTCTaGAATCCCAGAGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVQTWMV*NPREHE
Trigger: CTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGTGAGTGGATATATGTaGACTAACAGGGGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLVSGYM*TNRGED
Trigger: GTCTTCGCCCCTGTTAGTGCACATATATCCACTCAC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTCGCCCAGGCTGGAGTaGAGTAGTATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTSPRLE*SSMILA
Trigger: AGCCAAGATCATACTACTGCACTCCAGCCTGGGCGA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACAGTCATCGATCCAGATaGATTTTCCCGGGAAATGAC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYSHRSR*IFPGND
Trigger: GTCATTTCCCGGGAAAATGCATCTGGATCGATGACT...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTAAACCAGAGCATATGTaGTGTTCAAATCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAKPEHM*CSNPTS
Trigger: TGAAGTGGGATTTGAACAGCACATATGCTCTGGTTT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACCCTGTGATGCAACATaGTCCGCATGTGTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTPCDAT*SACVRP
Trigger: TGGACGAACACATGCGGAGCATGTTGCATCACAGGG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR CCA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATTGTGTTTTCTGTGTTaGGGAATTACGTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERLCFLC*GITCFI
Trigger: GATGAAACACGTAATTCCCCAACACAGAAAACACAA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCAGCCAGGGTGTGGACTaGCTGCAGATGTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLSQGVD*LQMSFV
Trigger: TACAAATGACATCTGCAGCCAGTCCACACCCTGGCT...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCGGCACTATTGAGGTTTaGCTCAGGAAGGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLGTIEV*LRKVYS
Trigger: GGAGTACACCTTCCTGAGCCAAACCTCAATAGTGCC...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATTTCTATGCCAAACCTaGGTAAGCCTTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLFLCQT*VSLCPA
Trigger: AGCTGGGCAAAGGCTTACCCAGGTTTGGCATAGAAA...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGAATCCTTCTAGACTaGACAGATCAGGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGILLD*TDQVPH
Trigger: ATGGGGAACCTGATCTGTCCAGTCTAGAAGGATTCC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCAGGGGACGAGGAAATaGAAACACCTTCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTQGTRK*KHLPTG
Trigger: TCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGCACTATGTCGCCTTTaGGTAGCAACATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLALCRL*VATFSA
Trigger: GGCTGAAAATGTTGCTACCCAAAGGCGACATAGTGC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGGTATAGACCTCTCCTaGCTGTTCAAGTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLGIDLS*LFKSFA
Trigger: GGCAAAAGACTTGAACAGCCAGGAGAGGTCTATACC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACTGCATCCGCTAAACTaGAGATCGCAAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKLHPLN*RSQGLR
Trigger: CCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTACAGCTACTATCTGTaGCTGCATCCGCTAAACTGG +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGYSYYL*LHPLNW
Trigger: CCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTA...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGCAGTGCGGCATCAATaGATGTTTGAGATCTACTGT +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYAVRHQ*MFEIYC
Trigger: ACAGTAGATCTCAAACATCCATTGATGCCGCACTGC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGCAGGGACACTGCCATaGGTTTGGAAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVAGTLP*VWKVGD
Trigger: GTCTCCTACTTTCCAAACCCATGGCAGTGTCCCTGC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACTATTCTCAGGAACATaGGCAGCCCGTAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLLFSGT*AARRLF
Trigger: GAAAAGTCTACGGGCTGCCCATGTTCCTGAGAATAG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAAGACGAGTCACTATCTaGCTCATCTCTGACACTCTC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLRRVTI*LISDTL
Trigger: GAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAATATCCTTTTTAGATaGGCTGTCTGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSNILFR*AVWFLF
Trigger: GAAGAGAAACCAGACAGCCCATCTAAAAAGGATATT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAATTCGCCATCTACTGTaGAGGCAGAGGACCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKIRHLL*RQRTRS
Trigger: AGACCGGGTCCTCTGCCTCCACAGTAGATGGCGAAT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAGAATGGTTTTGCTATaGCCCTCCAGAGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGRMVLL*PSRVLR
Trigger: CCTCAGAACTCTGGAGGGCCATAGCAAAACCATTCT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGGAGAGATGGAGGCTaGCAACTGAACAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGRDGG*QLNKPK
Trigger: TTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGGGAGAGATGGAGGCTaGCAACTGAACAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLGRDGG*QLNKPK
Trigger: TTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAA +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSIQWER*RLATEQ
Trigger: TTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTAT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACTTGGTATGTGGCCCTaGGCTCCTCCCCCAATTTTA +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTLGMWP*APPPIL
Trigger: TAAAATTGGGGGAGGAGCCCAGGGCCACATACCAAG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCCAAAGCTTGGTATGTaGCCCTGGGCTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVPKLGM*PWAPPP
Trigger: TGGGGGAGGAGCCCAGGGCCACATACCAAGCTTTGG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAGAGTGGGGATTTCAATaGTGGCATTTTATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGEWGFQ*WHFIWC
Trigger: ACACCAAATAAAATGCCATCATTGAAATCCCCACTC...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTGCGGCGGGCACTATTaGGGTTTGGCTCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVCGGHY*GLAQEG
Trigger: ACCTTCCTGAGCCAAACCTCAATAGTGCCCGCCGCA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGTCTCACTCTTTCGGTaGCCGCTAATATTGCGAATG +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLVSLFR*PLILRM
Trigger: CATTCGCAATATTAGCGGTCACCGAAAGAGTGAGAC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCTGTACCTTCCTCACTaGAGAAGCTATACACAGAAG +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSLYLPH*RSYTQK
Trigger: CTTCTGTGTATAGCTTCTTCAGTGAGGAAGGTACAG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGGTGTCACTTCTTGTTTaGGGTGCATGGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMVSLLV*GAWLLS
Trigger: AGAAAGCAACCATGCACCTCAAACAAGAAGTGACAC...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCTCTCCTGGGAATTCTaGTTCTCTGACGGTGGTATA +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLSWEF*FSDGGI
Trigger: TATACCACCGTCAGAGAATCAGAATTCCCAGGAGAG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACATCCATGCACTGCAATaGCTTACTAAGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYIHALQ*LTKFFL
Trigger: GAGGAAGAACTTAGTAAGTCATTGCAGTGCATGGAT...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATGGAGACGTGGTTATTTaGAGAGAGGCTCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDGDVVI*REAPVG
Trigger: ACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCC...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR TCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGCTAGAAAGACCAGCTaGTTGGGAAGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTARKTS*LGRGRV
Trigger: AACTCTCCCTCTTCCCAATCAGCTGGTCTTTCTAGC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGATCACTGGAGCCACTaGACACGAGATCATTCACCA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEDHWSH*TRDHSP
Trigger: TGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACCCACTGAGGGTTTGTaGATTTGGCTGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVPTEGL*IWLFSV
Trigger: CACTGAGAACAGCCAAATTCACAAACCCTCAGTGGG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCCCTGCCCGATAGCCTaGGGGAAGACATGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTPCPIA*GKTCEW
Trigger: CCACTCACATGTCTTCCCTCAGGCTATCGGGCAGGG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTGGAGTGCAGTAGTATaGTCTTGGCTCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLWSAVV*SWLTAT
Trigger: AGTTGCAGTGAGCCAAGATCATACTACTGCACTCCA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGACCAATTTTTGTTCCATaGTTTTCCGTGTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGPIFVP*FSVSDV
Trigger: GACATCTGACACGGAAAAGCATGGAACAAAAATTGG...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCTAGGTGAAACCATCTaGTGGGGCTCATTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSLGETI*WGSFSL
Trigger: CAAAGAAAATGAGCCCCAGCAGATGGTTTCACCTAG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAGGGCTGCACGGGCTTaGAGAAGATTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTRAARA*RRLLSM
Trigger: CATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACTCCATAGTTATCTGCTaGTTGAGCATAAGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYSIVIC*LSISSL
Trigger: GAGGCTACTTATGCTCAAGCAGCAGATAACTATGGA...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACTTCAGACCCACTATTaGCTTTGGTTGGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVLQTHY*LWLALP
Trigger: GGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGCTCCCGACCAGTCCTaGTGTCTTCCCAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGAPDQS*CLPKWR
Trigger: CCTCCACTTGGGAAGACAGCAGGACTGGTCGGGAGC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTCTCTGACACTCTCCTaGTCCCGACCAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTSLTLS*SRPVLL
Trigger: CAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCCACACTTACAGGGATaGCATCTTTATAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLPHLQG*HLYSEC
Trigger: GCACTCGCTATAAAGATGGCATCCCTGTAAGTGTGG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCACAGTCTGAGTTTCTaGCACACTTACAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTHSLSF*HTYRDA
Trigger: GGCATCCCTGTAAGTGTGGCAGAAACTCAGACTGTG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCACAGTCTGAGTTTCTaGCACACTTACAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEHSLSF*HTYRDA
Trigger: GGCATCCCTGTAAGTGTGGCAGAAACTCAGACTGTG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATCTTCCAGCTGTAACTaGTCCACACACTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKSSSCN*STHSRL
Trigger: GAGCCGAGAGTGTGTGGAGCAGTTACAGCTGGAAGA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGACCACAGTGCCATTTaGCAGTCCCGCATAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKDHSAI*QSRIED
Trigger: ATCCTCTATGCGGGACTGGCAAATGGCACTGTGGTC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTAGCAAGACAGCTGACTaGCCGAGGGCCATGGCATTC +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVSKTAD*PRAMAF
Trigger: GAATGCCATGGCCCTCGGGCAGTCAGCTGTCTTGCT...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTATTCACCACAGTCACTaGATGATTGTGACCTTTATA +
Preference number: 4 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAIHHSH*MIVTFI
Trigger: TATAAAGGTCACAATCATGCAGTGACTGTGGTGAAT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTCGTTCAATATGTCCTaGAGCATCCTGTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSSFNMS*SILFGS
Trigger: GGATCCAAACAGGATGCTGCAGGACATATTGAACGA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGCTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGLMLGV*LASNHF
Trigger: AAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAG...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIGIFDG*HRSRHG
Trigger: GCCGTGCCTAGACCGATGGCAGCCATCGAATATTCC...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAAAAACTGTATTCAGATaGTTTATTCTAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRKTVFR*FILTPS
Trigger: AGAGGGGGTTAGAATAAAGCATCTGAATACAGTTTT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACATTCAATTCTCCCCACTaGCATGGCACACTCACCAGA +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTFNSPH*HGTLTR
Trigger: TCTGGTGAGTGTGCCATGCCAGTGGGGAGAATTGAA...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR CCA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCATCAGAGTTTATTTCTTaGTTGCTATTGGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAASEFIS*LLLEGS
Trigger: TGAACCTTCCAATAGCAACCAAGAAATAAACTCTGA...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCTTTCTGGCGAACTATaGGATTACATGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLSGEL*DYMGKW
Trigger: CCACTTCCCCATGTAATCCCATAGTTCGCCAGAAAG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAGCCAGGGTGTGGACTaGCTGCAGATGTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTSQGVD*LQMSFV
Trigger: TACAAATGACATCTGCAGCCAGTCCACACCCTGGCT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACAGGGGACGAGGAAATaGAAACACCTTCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKQGTRK*KHLPTG
Trigger: TCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGCACTATGTCGCCTTTaGGTAGCAACATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLALCRL*VATFSA
Trigger: GGCTGAAAATGTTGCTACCCAAAGGCGACATAGTGC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGGTATAGACCTCTCCTaGCTGTTCAAGTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLGIDLS*LFKSFA
Trigger: GGCAAAAGACTTGAACAGCCAGGAGAGGTCTATACC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGTACAGCTACTATCTGTaGCTGCATCCGCTAAACTGG +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLYSYYL*LHPLNW
Trigger: CCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTA...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAACAGGGAACCTGGTCTaGGTGCTCAGAAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTTGNLV*VLRRFI
Trigger: TATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGT...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGAGGCTCCAGAAAAAGTaGGAAAAAGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLERLQKK*EKGSGQ
Trigger: CTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGAAGAGAGGCTCCGGTaGGTGATGGAGACACATGGG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNEERLR*VMETHG
Trigger: CCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGAAGAGAGGCTCCGGTaGGTGATGGAGACACATGGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVEERLR*VMETHG
Trigger: CCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGCAGGGACACTGCCATaGGTTTGGAAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKAGTLP*VWKVGD
Trigger: GTCTCCTACTTTCCAAACCCATGGCAGTGTCCCTGC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGACCCACTATTGCCTTTaGTTGGCTCTTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLTHYCL*LALPLL
Trigger: AAGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCAGCTGATGTCAAAGTaGATTCTGCCTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMQLMSK*ILPVVQ
Trigger: CTGAACAACAGGCAGAATCCACTTTGACATCAGCTG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTGCTGTCTTCCCAAGTaGAGGTTGTTACTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTCCLPK*RLLLSP
Trigger: GGGGGAAAGTAACAACCTCCACTTGGGAAGACAGCA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCAATATCCTTTTTAGATaGGCTGTCTGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVNILFR*AVWFLF
Trigger: GAAGAGAAACCAGACAGCCCATCTAAAAAGGATATT...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAGCATTTACGGCAGCTTaGTGTCCCTCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTAFTAA*CPSKLP
Trigger: AGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGC...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGCATTTACGGCAGCTTaGTGTCCCTCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTAFTAA*CPSKLP
Trigger: AGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCCTTCATGCAAAGAATaGTTTTGCTATGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMPSCKE*FCYGPP
Trigger: TGGAGGGCCATAGCAAAACCATTCTTTGCATGAAGG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAAGTTGGGATTAGTGTaGTCGGTCAGCAAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGKLGLV*SVSKCC
Trigger: ACAACACTTGCTGACCGACCACACTAATCCCAACTT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGCCAGAAACAAAAGGCTaGAAAGCGACACTTCTACAG +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGPETKG*KATLLQ
Trigger: CTGTAGAAGTGTCGCTTTCCAGCCTTTTGTTTCTGG...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACCAGAAACAAAAGGCTaGAAAGCGACACTTCTACAG +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLPETKG*KATLLQ
Trigger: CTGTAGAAGTGTCGCTTTCCAGCCTTTTGTTTCTGG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCCATGTTGGCCAGGCTaGTCTGCAACTCCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNPCWPG*SATPSL
Trigger: GAGGCTAGGAGTTGCAGACCAGCCTGGCCAACATGG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCCATGTCCCAAAGCTTaGTATGTGGCCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVPCPKA*YVALGS
Trigger: GGAGCCCAGGGCCACATACCAAGCTTTGGGACATGG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGAATAGGGGTGAGAGGTaGGAAAAGCTTCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMNRGER*EKLLNL
Trigger: GAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATT...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGTTCTTGGTTACTTGCTaGATGACCTGTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLFLVTC*MTCSQL
Trigger: CAACTGGGAACAGGTCATTCAGCAAGTAACCAAGAA...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGGAATTCTGATTCTCTaGCGGTGGTATAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTGILIL*RWYRPL
Trigger: GAGAGGTCTATACCACCGTCAGAGAATCAGAATTCC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCTCTCCTGGGAATTCTaGTTCTCTGACGGTGGTATA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLELSWEF*FSDGGI
Trigger: TATACCACCGTCAGAGAATCAGAATTCCCAGGAGAG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAATCCATGCACTGCAATaGCTTACTAAGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEIHALQ*LTKFFL
Trigger: GAGGAAGAACTTAGTAAGTCATTGCAGTGCATGGAT...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTCCTTCGTTCTCGTGTaGGGCTACAGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTSFVLV*GYREPG
Trigger: ACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATTCCTTCGTTCTCGTGTaGGGCTACAGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDSFVLV*GYREPG
Trigger: ACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGA...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR TCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLASMDV*DLLFLR
Trigger: ACGAAGGAACAGTAGATCTCAAACATCCATTGATGC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGASMDV*DLLFLR
Trigger: ACGAAGGAACAGTAGATCTCAAACATCCATTGATGC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATCCCCTAGTCTCAGCTaGTGTCAAAGTGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKSPSLS*CQSGFC
Trigger: GCAGAATCCACTTTGACATCAGCTGAGACTAGGGGA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGAGGAGATCACAGTCTaGGTTTCTGCCACACTTACA +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVEEITV*VSATLT
Trigger: TGTAAGTGTGGCAGAAACTCAGACTGTGATCTCCTC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAGAGGAGATCACAGTCTaGGTTTCTGCCACACTTACA +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTEEITV*VSATLT
Trigger: TGTAAGTGTGGCAGAAACTCAGACTGTGATCTCCTC...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTTTCGGGCACCTTCCTaGGCTGTAGCAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVFRAPS*AVARQL
Trigger: CAGCTGTCTTGCTACAGCTCAGGAAGGTGCCCGAAA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 4 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGATGGAGGCTGGCAACTaGACAAACCAAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEMEAGN*TNQKGS
Trigger: TGAACCCTTTTGGTTTGTTCAGTTGCCAGCCTCCAT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACAGCTAGCAGGGAAGTaGAGGCAAAGAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKQLAGK*RQRTVS
Trigger: TGAGACAGTTCTTTGCCTTCACTTCCCTGCTAGCTG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCCACGTTCTGAGTTTTaGGGATCCAGAAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLPRSEF*GSRNKR
Trigger: CCTTTTGTTTCTGGATCCTCAAAACTCAGAACGTGG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCGCCCGGCCACGTTCTaGGTTTTGAGGATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTRPATF*VLRIQK
Trigger: TTTCTGGATCCTCAAAACTCAGAACGTGGCCGGGCG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCTGAGGGAAGACATGTaGGTGGATATATGTGCACTA +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLREDM*VDICAL
Trigger: TAGTGCACATATATCCACTCACATGTCTTCCCTCAG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCACTGCCAGCCAGCGTaGAAATGCGGCTTCACTACA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVHCQPA*KCGFTT
Trigger: TGTAGTGAAGCCGCATTTTCACGCTGGCTGGCAGTG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCACTGCCAGCCAGCGTaGAAATGCGGCTTCACTACA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVHCQPA*KCGFTT
Trigger: TGTAGTGAAGCCGCATTTTCACGCTGGCTGGCAGTG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCCTGCAACACCCTTATaGCACCCGGAACGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNPATPL*HPERPL
Trigger: AAGAGGACGTTCCGGGTGGCATAAGGGTGTTGCAGG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTTGTTCAGGTTTTTCTaGAGTGGGGCACTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTLFRFF*SGALSH
Trigger: GTGAGACAGTGCCCCACTGCAGAAAAACCTGAACAA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGAAGGCTTCGCTTTCTTaGCAAGCCAGGGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTKASLS*QARGRG
Trigger: TCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGGGAGTGGGCAGCAGTaGGGCATCAATGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVGSGQQ*GINGCL
Trigger: CAAACATCCATTGATGCCGCACTGCTGCCCACTCCC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTTTCTGGTATTTCTTTaGTCCACAGAAAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVFLVFL*STENFS
Trigger: ACTGAAGTTTTCTGTGGAGCAAAGAAATACCAGAAA...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTCTCTGACACTCTCCTaGTCCCGACCAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTSLTLS*SRPVLL
Trigger: CAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCCACACTTACAGGGATaGCATCTTTATAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEPHLQG*HLYSEC
Trigger: GCACTCGCTATAAAGATGGCATCCCTGTAAGTGTGG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTAGCAAGACAGCTGACTaGCCGAGGGCCATGGCATTC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTSKTAD*PRAMAF
Trigger: GAATGCCATGGCCCTCGGGCAGTCAGCTGTCTTGCT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLLMLGV*LASNHF
Trigger: AAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTT +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLMLGV*LASNHF
Trigger: AAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGCATATATCACTATATaGCATGCTGTCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSAYITI*HAVPEK
Trigger: CTTCTCTGGGACAGCATGGCATATAGTGATATATGC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGTTAGGTCTACGCACTaGCTCACACTGAGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTVRSTH*LTLSFL
Trigger: TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAAC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTTCAAGCGATTCTCCTaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNFKRFS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCACAAAGCCACTAAATaGCAGAGTCAACACAGATCC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLHKATK*QSQHRS
Trigger: GGATCTGTGTTGACTCTGGCATTTAGTGGCTTTGTG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCGATGTGGCATAATATaGATTTTCGTTCTCGTACCA +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYRCGII*IFVLVP
Trigger: TGGTACGAGAACGAAAATGCATATTATGCCACATCG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTTTCTATGCCAAACCTaGGTAAGCCTTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTFLCQT*VSLCPA
Trigger: AGCTGGGCAAAGGCTTACCCAGGTTTGGCATAGAAA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGCACTATGTCGCCTTTaGGTAGCAACATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEALCRL*VATFSA
Trigger: GGCTGAAAATGTTGCTACCCAAAGGCGACATAGTGC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGGTATAGACCTCTCCTaGCTGTTCAAGTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEGIDLS*LFKSFA
Trigger: GGCAAAAGACTTGAACAGCCAGGAGAGGTCTATACC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCTGCATCCGCTAAACTaGAGATCGCAAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNLHPLN*RSQGLR
Trigger: CCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTACAGCTACTATCTGTaGCTGCATCCGCTAAACTGG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTYSYYL*LHPLNW
Trigger: CCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTERICIL*VLSALI
Trigger: GATGAGTGCACTGAGGACCCATAGAATACAGATTCT...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSRICIL*VLSALI
Trigger: GATGAGTGCACTGAGGACCCATAGAATACAGATTCT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAGGCTACAGGGAACCTaGTCTGGGTGCTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVRLQGT*SGCSEG
Trigger: ACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCGCAGTGCGGCATCAATaGATGTTTGAGATCTACTGT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLAVRHQ*MFEIYC
Trigger: ACAGTAGATCTCAAACATCCATTGATGCCGCACTGC...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGTGGGAAAAAGGGAGTaGGCAGCAGTGCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNVGKRE*AAVRHQ
Trigger: TTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCAC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATGTGGGAAAAAGGGAGTaGGCAGCAGTGCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDVGKRE*AAVRHQ
Trigger: TTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCAC...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGACACTGCCATGGGTTTaGAAAGTAGGAGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLETLPWV*KVGDVV
Trigger: AACCACGTCTCCTACTTTCCAAACCCATGGCAGTGT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAACACTGCCATGGGTTTaGAAAGTAGGAGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTTLPWV*KVGDVV
Trigger: AACCACGTCTCCTACTTTCCAAACCCATGGCAGTGT...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAATTGCAGGCAGAGCTTaGTGGCACAGCATTCACATT +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVIAGRA*WHSIHI
Trigger: AATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAAT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACTTCCAGTAATTCCTTaGACACATTGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVLPVIP*THCRQS
Trigger: GCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGATGACTGGATAAACTaGACAACTGTCACTGATCTC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLDDWIN*TTVTDL
Trigger: GAGATCAGTGACAGTTGTCCAGTTTATCCAGTCATC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTCTAGCAGTGATGACTaGATAAACTGGACAACTGTC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSSSSDD*INWTTV
Trigger: GACAGTTGTCCAGTTTATCCAGTCATCACTGCTAGA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGTCTTGGCTAGGCTCATaGAAACTTTCTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMSWLGS*KLSVDS
Trigger: AGAGTCAACAGAAAGTTTCCATGAGCCTAGCCAAGA...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTCTTGGCTAGGCTCATaGAAACTTTCTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSSWLGS*KLSVDS
Trigger: AGAGTCAACAGAAAGTTTCCATGAGCCTAGCCAAGA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTGGTCAGCTGGAGAGTaGGGTTCCTTCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVWSAGE*GSFSKG
Trigger: CCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTTTCAGGCTGGTCAGCTaGAGAGTGGGGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVFRLVS*RVGFLL
Trigger: GAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAA...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCTATTCTCAGGAACATaGGCAGCCCGTAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTLFSGT*AARRLF
Trigger: GAAAAGTCTACGGGCTGCCCATGTTCCTGAGAATAG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACTATTCTCAGGAACATaGGCAGCCCGTAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTLFSGT*AARRLF
Trigger: GAAAAGTCTACGGGCTGCCCATGTTCCTGAGAATAG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCTATTCTCAGGAACATaGGCAGCCCGTAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLELFSGT*AARRLF
Trigger: GAAAAGTCTACGGGCTGCCCATGTTCCTGAGAATAG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATGCTGTCTTCCCAAGTaGAGGTTGTTACTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKCCLPK*RLLLSP
Trigger: GGGGGAAAGTAACAACCTCCACTTGGGAAGACAGCA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAGACGAGTCACTATCTaGCTCATCTCTGACACTCTC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTRRVTI*LISDTL
Trigger: GAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGGATGGTATGGTCACTaGACCCGGTGTAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVGWYGH*TRCKGQ
Trigger: CTGCCCTTTACACCGGGTCCAGTGACCATACCATCC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGGATGGTATGGTCACTaGACCCGGTGTAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNGWYGH*TRCKGQ
Trigger: CTGCCCTTTACACCGGGTCCAGTGACCATACCATCC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATACATTATAGCAGCGGATaGTATGGTCACTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIHYSSG*YGHWTR
Trigger: CCGGGTCCAGTGACCATACCATCCGCTGCTATAATG...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGAGAATGGTTTTGCTATaGCCCTCCAGAGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLERMVLL*PSRVLR
Trigger: CCTCAGAACTCTGGAGGGCCATAGCAAAACCATTCT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGAAGTTGGGATTAGTGTaGTCGGTCAGCAAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLKLGLV*SVSKCC
Trigger: ACAACACTTGCTGACCGACCACACTAATCCCAACTT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGGGAGAGATGGAGGCTaGCAACTGAACAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVGRDGG*QLNKPK
Trigger: TTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCCAGAAACAAAAGGCTaGAAAGCGACACTTCTACAG +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLPETKG*KATLLQ
Trigger: CTGTAGAAGTGTCGCTTTCCAGCCTTTTGTTTCTGG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAGAAGACAGACCTGGATaGTCTGCAATCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIEDRPG*SAIPES
Trigger: GCTCTCTGGGATTGCAGACCATCCAGGTCTGTCTTC...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACTTTCTCTATCATTTCTaGCTTGTTACCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYFLYHF*LVTSDV
Trigger: GACATCACTGGTAACAAGTCAGAAATGATAGAGAAA...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTCAGAAGAGGCCTTGTaGTTAAGAGATCCAGTATGT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLSEEAL*LRDPVC
Trigger: ACATACTGGATCTCTTAATCACAAGGCCTCTTCTGA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAGAGTGGGGATTTCAATaGTGGCATTTTATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEEWGFQ*WHFIWC
Trigger: ACACCAAATAAAATGCCATCATTGAAATCCCCACTC...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGCTTCTTGTTCATTTTaGACAAGGGGTACCATTTCT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSASCSF*TRGTIS
Trigger: AGAAATGGTACCCCTTGTTCAAAATGAACAAGAAGC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCTGTACCTTCCTCACTaGAGAAGCTATACACAGAAG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTLYLPH*RSYTQK
Trigger: CTTCTGTGTATAGCTTCTTCAGTGAGGAAGGTACAG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGTGTCACTTCTTGTTTaGGGTGCATGGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVVSLLV*GAWLLS
Trigger: AGAAAGCAACCATGCACCTCAAACAAGAAGTGACAC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTATCTGGCTCATCTCTaGCACTCTCCTGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGYLAHL*HSPAPD
Trigger: GTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTTAACTTTGGAGGTATaGCCCTCAAAGACACCAATA +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSLTLEV*PSKTPI
Trigger: TATTGGTGTCTTTGAGGGTCATACCTCCAAAGTTAA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTTCTTCCCGGAGGTCTaGGTAACCAGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTFFPEV*VTRRQL
Trigger: TAACTGCCTCCTGGTTACTCAGACCTCCGGGAAGAA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGTTGTGAGCATGGACTaGCTGATCACTGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVVVSMD*LITGAT
Trigger: AGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAAC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACGCACTGCCTCACACTaGGCTTTCTATCCACATTTA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKRTASH*AFYPHL
Trigger: TAAATGTGGATAGAAAGCTCAGTGTGAGGCAGTGCG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGTGGAAAACACCCCGTaGGCCCAGAGGAATATTCGA +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVVENTP*AQRNIR
Trigger: TCGAATATTCCTCTGGGCTCACGGGGTGTTTTCCAC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCAATCCCAGAGAGCATaGGGCACCATGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTQSQRA*GTMSQS
Trigger: GCTTTGGGACATGGTGCCTCATGCTCTCTGGGATTG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGCTCACAGACCCTCTTaGAGCCTATCCATAAACCCC +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTAHRPS*SLSINP
Trigger: GGGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGCTCACAGACCCTCTTaGAGCCTATCCATAAACCCC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNAHRPS*SLSINP
Trigger: GGGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCCTCCAGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCTGGAGG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCAGTCAGGTGTCATCTaGTTTCATTCTTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMQSGVI*FHSSNP
Trigger: TGGATTAGAAGAATGAAATCAGATGACACCTGACTG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTACGAGGCTTTTCCCTTaGCGCACTGCCATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVTRLFP*RTAILS
Trigger: GGAAAGAATGGCAGTGCGGCAAGGGAAAAGCCTCGT...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACATCAGCAGTTCGAGTaGTGCCAGATAACAATTCTG +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVHQQFE*CQITIL
Trigger: CAGAATTGTTATCTGGCAGCACTCGAACTGCTGATG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTAAGGCTTCGCTTTCTTaGCAAGCCAGGGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGKASLS*QARGRG
Trigger: TCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTCCATAGTTATCTGCTaGTTGAGCATAAGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLSIVIC*LSISSL
Trigger: GAGGCTACTTATGCTCAAGCAGCAGATAACTATGGA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAATCTCCATAGTTATCTaGTGCTTGAGCATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLISIVI*CLSISS
Trigger: GCTACTTATGCTCAAGCAGCAGATAACTATGGAGAT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGATCTCCATAGTTATCTaGTGCTTGAGCATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGISIVI*CLSISS
Trigger: GCTACTTATGCTCAAGCAGCAGATAACTATGGAGAT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTCTATGGGTCCTCAGTaGACTCATCTCCATAGTTAT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLSMGPQ*THLHSY
Trigger: ATAACTATGGAGATGAGTGCACTGAGGACCCATAGA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGGAACCTGGTCTGGGTaGTCAGAAGGTTCATATGTT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKGTWSG*SEGSYV
Trigger: AACATATGAACCTTCTGAGCACCCAGACCAGGTTCC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTCTTCCAGCTGTAACTaGTCCACACACTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNSSSCN*STHSRL
Trigger: GAGCCGAGAGTGTGTGGAGCAGTTACAGCTGGAAGA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGACCACAGTGCCATTTaGCAGTCCCGCATAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNDHSAI*QSRIED
Trigger: ATCCTCTATGCGGGACTGGCAAATGGCACTGTGGTC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTATGCAAAGAATGGTTTTaGTATGGCCCTCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVCKEWF*YGPPEF
Trigger: GAACTCTGGAGGGCCATAGCAAAACCATTCTTTGCA...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTCGTTCAATATGTCCTaGAGCATCCTGTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTSFNMS*SILFGS
Trigger: GGATCCAAACAGGATGCTGCAGGACATATTGAACGA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGTTAGGTCTACGCACTaGCTCACACTGAGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKVRSTH*LTLSFL
Trigger: TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAAC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGGAATATTCGATGGCTaGCATCGGTCTAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTGIFDG*HRSRHG
Trigger: GCCGTGCCTAGACCGATGGCAGCCATCGAATATTCC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGCCAGGCAGAGTCTCTaGTCCACTCTTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGARQSL*STLLSQ
Trigger: CTGGGAAAGAAGAGTGGAGCAGAGACTCTGCCTGGC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGACGATCTCAGCTTACTaGAATCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTTISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGATTGCAGTAAGCTGAGATCGT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCAGACCTGGATGGTCTaGAATCCCAGAGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVQTWMV*NPREHE
Trigger: CTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAACCAAATCATCCACATaGCTCATCACTAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTETKSST*LITKVV
Trigger: GACAACTTTAGTGATGAGGCATGTGGATGATTTGGT...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGAGCTCATATCCACTTaGATAAGGAAACCTAGTCTA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLELIST*IRKPSL
Trigger: TAGACTAGGTTTCCTTATGCAAGTGGATATGAGCTC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTTTCCAATCCCGCTGTaGAGGTCCACGATGATGCCA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVFPIPL*RSTMMP
Trigger: TGGCATCATCGTGGACCTCCACAGCGGGATTGGAAA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAACTGTAGCACCTCTTTaGCCTTTCGTAAAGTATCAT +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLTVAPL*PFVKYH
Trigger: ATGATACTTTACGAAAGGCCAAAGAGGTGCTACAGT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCAGGGGACGAGGAAATaGAAACACCTTCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTQGTRK*KHLPTG
Trigger: TCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLRICIL*VLSALI
Trigger: GATGAGTGCACTGAGGACCCATAGAATACAGATTCT...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATACAGGGAACCTGGTCTaGGTGCTCAGAAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDTGNLV*VLRRFI
Trigger: TATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGT...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGGTGATGGAGACACATaGGAAGATGGAGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVGDGDT*EDGGSR
Trigger: TCTGGAGCCTCCATCTTCCCATGTGTCTCCATCACC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGGTGATGGAGACACATaGGAAGATGGAGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVGDGDT*EDGGSR
Trigger: TCTGGAGCCTCCATCTTCCCATGTGTCTCCATCACC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCGAAGAGAGGCTCCGGTaGGTGATGGAGACACATGGG +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLEERLR*VMETHG
Trigger: CCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTC...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAACACTGCCATGGGTTTaGAAAGTAGGAGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKTLPWV*KVGDVV
Trigger: AACCACGTCTCCTACTTTCCAAACCCATGGCAGTGT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGATGACTGGATAAACTaGACAACTGTCACTGATCTC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLDDWIN*TTVTDL
Trigger: GAGATCAGTGACAGTTGTCCAGTTTATCCAGTCATC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGTCTAGCAGTGATGACTaGATAAACTGGACAACTGTC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLSSSDD*INWTTV
Trigger: GACAGTTGTCCAGTTTATCCAGTCATCACTGCTAGA...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTCTTGGCTAGGCTCATaGAAACTTTCTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLSWLGS*KLSVDS
Trigger: AGAGTCAACAGAAAGTTTCCATGAGCCTAGCCAAGA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGAAAACTTCAGTTCTTaGCTAGGCTCATGGAAACTT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSENFSS*LGSWKL
Trigger: AAGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGAAAACTTCAGTTCTTaGCTAGGCTCATGGAAACTT +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGENFSS*LGSWKL
Trigger: AAGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAACCCACTATTGCCTTTaGTTGGCTCTTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKTHYCL*LALPLL
Trigger: AAGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTGGTCAGCTGGAGAGTaGGGTTCCTTCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTWSAGE*GSFSKG
Trigger: CCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTGGTCAGCTGGAGAGTaGGGTTCCTTCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGWSAGE*GSFSKG
Trigger: CCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTTCAGGCTGGTCAGCTaGAGAGTGGGGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTFRLVS*RVGFLL
Trigger: GAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACAGCTGATGTCAAAGTaGATTCTGCCTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTQLMSK*ILPVVQ
Trigger: CTGAACAACAGGCAGAATCCACTTTGACATCAGCTG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAAGACGAGTCACTATCTaGCTCATCTCTGACACTCTC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKRRVTI*LISDTL
Trigger: GAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGGATGGTATGGTCACTaGACCCGGTGTAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGGWYGH*TRCKGQ
Trigger: CTGCCCTTTACACCGGGTCCAGTGACCATACCATCC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCATTATAGCAGCGGATaGTATGGTCACTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVHYSSG*YGHWTR
Trigger: CCGGGTCCAGTGACCATACCATCCGCTGCTATAATG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATTCGCCATCTACTGTaGAGGCAGAGGACCCGGTCT +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTIRHLL*RQRTRS
Trigger: AGACCGGGTCCTCTGCCTCCACAGTAGATGGCGAAT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACCTTCATGCAAAGAATaGTTTTGCTATGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVPSCKE*FCYGPP
Trigger: TGGAGGGCCATAGCAAAACCATTCTTTGCATGAAGG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCCTTCATGCAAAGAATaGTTTTGCTATGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEPSCKE*FCYGPP
Trigger: TGGAGGGCCATAGCAAAACCATTCTTTGCATGAAGG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGAAGACAGACCTGGATaGTCTGCAATCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVEDRPG*SAIPES
Trigger: GCTCTCTGGGATTGCAGACCATCCAGGTCTGTCTTC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGAAGACAGACCTGGATaGTCTGCAATCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVEDRPG*SAIPES
Trigger: GCTCTCTGGGATTGCAGACCATCCAGGTCTGTCTTC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGAAGTCAAGAGCTTGTaGGGCCATATATTATCTAGT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSEVKSL*GHILSS
Trigger: ACTAGATAATATATGGCCCCACAAGCTCTTGACTTC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGAAGTCAAGAGCTTGTaGGGCCATATATTATCTAGT +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLEVKSL*GHILSS
Trigger: ACTAGATAATATATGGCCCCACAAGCTCTTGACTTC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACATTGCTTTTGAGACAATaGTTTAGTGGCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTLLLRQ*FSGWTW
Trigger: CCATGTCCAGCCACTAAATCATTGTCTCAAAAGCAA...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAATTTGGATCTTGCTTTTaGGACAATGATTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEFGSCF*DNDLVA
Trigger: AGCCACTAAATCATTGTCTCAAAAGCAAGATCCAAA...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCGCTTCTTGTTCATTTTaGACAAGGGGTACCATTTCT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLASCSF*TRGTIS
Trigger: AGAAATGGTACCCCTTGTTCAAAATGAACAAGAAGC...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACTGTACCTTCCTCACTaGAGAAGCTATACACAGAAG +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKLYLPH*RSYTQK
Trigger: CTTCTGTGTATAGCTTCTTCAGTGAGGAAGGTACAG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGTGTCACTTCTTGTTTaGGGTGCATGGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKVSLLV*GAWLLS
Trigger: AGAAAGCAACCATGCACCTCAAACAAGAAGTGACAC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAATCCATGCACTGCAATaGCTTACTAAGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVIHALQ*LTKFFL
Trigger: GAGGAAGAACTTAGTAAGTCATTGCAGTGCATGGAT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGATCCATGCACTGCAATaGCTTACTAAGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEIHALQ*LTKFFL
Trigger: GAGGAAGAACTTAGTAAGTCATTGCAGTGCATGGAT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEASMDV*DLLFLR
Trigger: ACGAAGGAACAGTAGATCTCAAACATCCATTGATGC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTCCCCTAGTCTCAGCTaGTGTCAAAGTGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTSPSLS*CQSGFC
Trigger: GCAGAATCCACTTTGACATCAGCTGAGACTAGGGGA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGTTAACTTTGGAGGTATaGCCCTCAAAGACACCAATA +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLTLEV*PSKTPI
Trigger: TATTGGTGTCTTTGAGGGTCATACCTCCAAAGTTAA...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTTCTTCCCGGAGGTCTaGGTAACCAGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGFFPEV*VTRRQL
Trigger: TAACTGCCTCCTGGTTACTCAGACCTCCGGGAAGAA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGATCACTGGAGCCACTaGACACGAGATCATTCACCA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTDHWSH*TRDHSP
Trigger: TGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATACGCACTGCCTCACACTaGGCTTTCTATCCACATTTA +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIRTASH*AFYPHL
Trigger: TAAATGTGGATAGAAAGCTCAGTGTGAGGCAGTGCG...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCAGCTAGCAGGGAAGTaGAGGCAAAGAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTQLAGK*RQRTVS
Trigger: TGAGACAGTTCTTTGCCTTCACTTCCCTGCTAGCTG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCCCACTGAGGGTTTGTaGATTTGGCTGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNPTEGL*IWLFSV
Trigger: CACTGAGAACAGCCAAATTCACAAACCCTCAGTGGG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACTGAGGGAAGACATGTaGGTGGATATATGTGCACTA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKLREDM*VDICAL
Trigger: TAGTGCACATATATCCACTCACATGTCTTCCCTCAG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR TCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCATTTTCCCGGGAAATaGCCATTCCCAAACCCACAG +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVHFPGK*PFPNPQ
Trigger: CTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCAACTGCTTTATAAACTaGGTAGAGACGTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSNCFIN*VETYAK
Trigger: TTTGGCATACGTCTCTACTCAGTTTATAAAGCAGTT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTACGAGGCTTTTCCCTTaGCGCACTGCCATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTTRLFP*RTAILS
Trigger: GGAAAGAATGGCAGTGCGGCAAGGGAAAAGCCTCGT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCCAATTTTTGTTCCATaGTTTTCCGTGTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLPIFVP*FSVSDV
Trigger: GACATCTGACACGGAAAAGCATGGAACAAAAATTGG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTTTGAGGTGCATGGTTaGTTTCTGGCTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVFEVHG*FLALSS
Trigger: GCTGGACAGAGCCAGAAAGCAACCATGCACCTCAAA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGTTTGAGGTGCATGGTTaGTTTCTGGCTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVFEVHG*FLALSS
Trigger: GCTGGACAGAGCCAGAAAGCAACCATGCACCTCAAA...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGAGGGCTGCACGGGCTTaGAGAAGATTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTRAARA*RRLLSM
Trigger: CATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGTCCATAGTTATCTGCTaGTTGAGCATAAGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLESIVIC*LSISSL
Trigger: GAGGCTACTTATGCTCAAGCAGCAGATAACTATGGA...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACATCTATGGGTCCTCAGTaGACTCATCTCCATAGTTAT +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTSMGPQ*THLHSY
Trigger: ATAACTATGGAGATGAGTGCACTGAGGACCCATAGA...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAGGGAGTGGGCAGCAGTaGGGCATCAATGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: CTYPNKWNLVGANTKSTLGSGQQ*GINGCL
Trigger: CAAACATCCATTGATGCCGCACTGCTGCCCACTCCC...TAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCTTCAGACCCACTATTaGCTTTGGTTGGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNLQTHY*LWLALP
Trigger: GGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGTTTCTAGTGGGTTTTaGTCTGTAGAGTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLVSSGF*SVEFQI
Trigger: TATTTGGAACTCTACAGAGCAAAACCCACTAGAAAC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCACAGTCTGAGTTTCTaGCACACTTACAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVHSLSF*HTYRDA
Trigger: GGCATCCCTGTAAGTGTGGCAGAAACTCAGACTGTG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCACAGTCTGAGTTTCTaGCACACTTACAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVHSLSF*HTYRDA
Trigger: GGCATCCCTGTAAGTGTGGCAGAAACTCAGACTGTG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCCCAAATATCTGAATTaGATTTACGGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTPKYLN*IYGSLV
Trigger: CACCAAGCTGCCGTAAATGCAATTCAGATATTTGGG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCATTCACCACCTTCATaGAAAGAATGGTTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSHSPPS*KEWFCY
Trigger: ATAGCAAAACCATTCTTTGCATGAAGGTGGTGAATG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAGCCAGTGTAAATCATaGTTTTATGGATGGTCATAC +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGSQCKS*FYGWSY
Trigger: GTATGACCATCCATAAAAGCATGATTTACACTGGCT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATCGTTCAATATGTCCTaGAGCATCCTGTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKSFNMS*SILFGS
Trigger: GGATCCAAACAGGATGCTGCAGGACATATTGAACGA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACTTATGCTAGGGGTATaGCTGGCTAGTAACCACTTT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKLMLGV*LASNHF
Trigger: AAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTATATCACTATATGCCATaGTGTCCCAGAGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVYHYMP*CPREVW
Trigger: CCATACTTCTCTGGGACAGCATGGCATATAGTGATA...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTATCACTATATGCCATaGTGTCCCAGAGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTYHYMP*CPREVW
Trigger: CCATACTTCTCTGGGACAGCATGGCATATAGTGATA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGTATCACTATATGCCATaGTGTCCCAGAGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEYHYMP*CPREVW
Trigger: CCATACTTCTCTGGGACAGCATGGCATATAGTGATA...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGCATATATCACTATATaGCATGCTGTCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTAYITI*HAVPEK
Trigger: CTTCTCTGGGACAGCATGGCATATAGTGATATATGC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACAAAACTGTATTCAGATaGTTTATTCTAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYKTVFR*FILTPS
Trigger: AGAGGGGGTTAGAATAAAGCATCTGAATACAGTTTT...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCAGACCTGGATGGTCTaGAATCCCAGAGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGQTWMV*NPREHE
Trigger: CTCATGCTCTCTGGGATTGCAGACCATCCAGGTCTG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTCGCCCAGGCTGGAGTaGAGTAGTATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGSPRLE*SSMILA
Trigger: AGCCAAGATCATACTACTGCACTCCAGCCTGGGCGA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCTACCCGTTTCCTGCTaGACAAAGTCTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTLPVSC*TKSPSL
Trigger: GAGTGAAGGAGACTTTGTGCAGCAGGAAACGGGTAG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCACCTACCCGTTTCCTaGTGCACAAAGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVHLPVS*CTKSPS
Trigger: TGAAGGAGACTTTGTGCAGCAGGAAACGGGTAGGTG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGATGTAAGCATAAACTaGAGTTATTTGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYDVSIN*SYLSKP
Trigger: TGGTTTGCTCAAATAACTGCAGTTTATGCTTACATC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCGATGTGGCATAATATaGATTTTCGTTCTCGTACCA +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLRCGII*IFVLVP
Trigger: TGGTACGAGAACGAAAATGCATATTATGCCACATCG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR CCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTTTCTTGGTTGCTATTaGAAGGTTCATCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLFLGCY*KVHLVD
Trigger: GTCGACAAGATGAACCTTCCAATAGCAACCAAGAAA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGACTGTAGCACCTCTTTaGCCTTTCGTAAAGTATCAT +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLTVAPL*PFVKYH
Trigger: ATGATACTTTACGAAAGGCCAAAGAGGTGCTACAGT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVRICIL*VLSALI
Trigger: GATGAGTGCACTGAGGACCCATAGAATACAGATTCT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCACAGGGAACCTGGTCTaGGTGCTCAGAAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVTGNLV*VLRRFI
Trigger: TATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGACAGGGAACCTGGTCTaGGTGCTCAGAAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTTGNLV*VLRRFI
Trigger: TATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGACAGGGAACCTGGTCTaGGTGCTCAGAAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVTGNLV*VLRRFI
Trigger: TATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCAGGCTACAGGGAACCTaGTCTGGGTGCTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLRLQGT*SGCSEG
Trigger: ACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCT...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGGTGATGGAGACACATaGGAAGATGGAGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGGDGDT*EDGGSR
Trigger: TCTGGAGCCTCCATCTTCCCATGTGTCTCCATCACC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAATTGCAGGCAGAGCTTaGTGGCACAGCATTCACATT +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIIAGRA*WHSIHI
Trigger: AATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAAT...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATCTTCCAGTAATTCCTTaGACACATTGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDLPVIP*THCRQS
Trigger: GCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAG...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGATGACTGGATAAACTaGACAACTGTCACTGATCTC +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVDDWIN*TTVTDL
Trigger: GAGATCAGTGACAGTTGTCCAGTTTATCCAGTCATC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGACTATTGCCTTTGGTTaGCTCTTCCCCTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLTIAFG*LFPFFI
Trigger: AATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACAGCTGATGTCAAAGTaGATTCTGCCTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKQLMSK*ILPVVQ
Trigger: CTGAACAACAGGCAGAATCCACTTTGACATCAGCTG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCAATATCCTTTTTAGATaGGCTGTCTGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSNILFR*AVWFLF
Trigger: GAAGAGAAACCAGACAGCCCATCTAAAAAGGATATT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGACTGCCCGAGGGCCATaGCATTCAAAGATCTCAAGT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTTARGP*HSKISS
Trigger: ACTTGAGATCTTTGAATGCCATGGCCCTCGGGCAGT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAAAGTTGGGATTAGTGTaGTCGGTCAGCAAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKKLGLV*SVSKCC
Trigger: ACAACACTTGCTGACCGACCACACTAATCCCAACTT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATAGAGAGTGGCCTGTGTaGGGGGCCAATGTGAAAATA +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNREWPV*GANVKI
Trigger: TATTTTCACATTGGCCCCCCACACAGGCCACTCTCT...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 4 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 4 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAGAAACCAAGGGTGCTaGAGCAGCTCTAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVRNQGC*SSSRAY
Trigger: ATATGCCCTAGAGCTGCTCCAGCACCCTTGGTTTCT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTACCCCAGTCTCACTACTaGGATGCCCTTAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: CTYPNKWNLVGANTKSTLPQSHY*DALNPE
Trigger: CTCTGGGTTAAGGGCATCCCAGTAGTGAGACTGGGG...TAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCTTGTTCGAGGGATTTaGGTGTTCTCCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTLVRGI*VFSRGK
Trigger: TTTTCCCCTGGAGAACACTCAAATCCCTCGAACAAG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGTCTCACTCTTTCGGTaGCCGCTAATATTGCGAATG +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVVSLFR*PLILRM
Trigger: CATTCGCAATATTAGCGGTCACCGAAAGAGTGAGAC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATATTCTTGGTTACTTGCTaGATGACCTGTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIFLVTC*MTCSQL
Trigger: CAACTGGGAACAGGTCATTCAGCAAGTAACCAAGAA...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGCTAGAAAGACCAGCTaGTTGGGAAGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGARKTS*LGRGRV
Trigger: AACTCTCCCTCTTCCCAATCAGCTGGTCTTTCTAGC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGATCACTGGAGCCACTaGACACGAGATCATTCACCA +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTDHWSH*TRDHSP
Trigger: TGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCGCACTGCCTCACACTaGGCTTTCTATCCACATTTA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVRTASH*AFYPHL
Trigger: TAAATGTGGATAGAAAGCTCAGTGTGAGGCAGTGCG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCAGCTAGCAGGGAAGTaGAGGCAAAGAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGQLAGK*RQRTVS
Trigger: TGAGACAGTTCTTTGCCTTCACTTCCCTGCTAGCTG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTGGAGTGCAGTAGTATaGTCTTGGCTCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTWSAVV*SWLTAT
Trigger: AGTTGCAGTGAGCCAAGATCATACTACTGCACTCCA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTTTGTTCAGGTTTTTCTaGAGTGGGGCACTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVLFRFF*SGALSH
Trigger: GTGAGACAGTGCCCCACTGCAGAAAAACCTGAACAA...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGATGCATTTAGAATCTaGCGTAGGGTTGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVDAFRI*RRVGLS
Trigger: GCTCAAGCCAACCCTACGGCAGATTCTAAATGCATC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGACCTGGGTAAGCCTTTaGCCAGCTCTTGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTTWVSL*PALAFS
Trigger: AGAAAAAGCAAGAGCTGGGCAAAGGCTTACCCAGGT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTTTGAGGTGCATGGTTaGTTTCTGGCTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTFEVHG*FLALSS
Trigger: GCTGGACAGAGCCAGAAAGCAACCATGCACCTCAAA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCAGCTGTCTGAAGGGCTaGACGGGCTTGCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLSCLKG*TGLQKI
Trigger: AATCTTCTGCAAGCCCGTGCAGCCCTTCAGACAGCT...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATCCATAGTTATCTGCTaGTTGAGCATAAGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKSIVIC*LSISSL
Trigger: GAGGCTACTTATGCTCAAGCAGCAGATAACTATGGA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAATCTCCATAGTTATCTaGTGCTTGAGCATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTISIVI*CLSISS
Trigger: GCTACTTATGCTCAAGCAGCAGATAACTATGGAGAT...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATGGAACCTGGTCTGGGTaGTCAGAAGGTTCATATGTT +
Preference number: 4 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDGTWSG*SEGSYV
Trigger: AACATATGAACCTTCTGAGCACCCAGACCAGGTTCC...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTGTCAAAGTGGATTCTaGCTGTTGTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNCQSGF*LLFRLV
Trigger: GACCAGCCTGAACAACAGGCAGAATCCACTTTGACA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTGTCAAAGTGGATTCTaGCTGTTGTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVCQSGF*LLFRLV
Trigger: GACCAGCCTGAACAACAGGCAGAATCCACTTTGACA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCCACACTTACAGGGATaGCATCTTTATAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNPHLQG*HLYSEC
Trigger: GCACTCGCTATAAAGATGGCATCCCTGTAAGTGTGG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGATTCACCACAGTCACTaGATGATTGTGACCTTTATA +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLIHHSH*MIVTFI
Trigger: TATAAAGGTCACAATCATGCAGTGACTGTGGTGAAT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGTTAGGTCTACGCACTaGCTCACACTGAGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVVRSTH*LTLSFL
Trigger: TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAAC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGTGAGTGGATATATGTaGACTAACAGGGGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNVSGYM*TNRGED
Trigger: GTCTTCGCCCCTGTTAGTGCACATATATCCACTCAC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCTACCCGTTTCCTGCTaGACAAAGTCTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGLPVSC*TKSPSL
Trigger: GAGTGAAGGAGACTTTGTGCAGCAGGAAACGGGTAG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCATAAGCAGCCAAAATaGTTATGGTCCCTTTATTTC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLHKQPK*LWSLYF
Trigger: GAAATAAAGGGACCATAAGCATTTTGGCTGCTTATG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAAAACCAGAGCATATGTaGTGTTCAAATCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVKPEHM*CSNPTS
Trigger: TGAAGTGGGATTTGAACAGCACATATGCTCTGGTTT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGGACACTGCACACTTTaGCACAGTGAAAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKGHCTL*HSEKLV
Trigger: CACTAATTTTTCACTGTGCCAAAGTGTGCAGTGTCC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGGTTATCTTCCACAGTaGGCTTGTTCGAGGGATTTG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVGYLPQ*ACSRDL
Trigger: CAAATCCCTCGAACAAGCCCACTGTGGAAGATAACC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTATGAACTACGCAGTTTaGATATGTAAGGACCATGGT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTMNYAV*ICKDHG
Trigger: ACCATGGTCCTTACATATCCAAACTGCGTAGTTCAT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGGTATAGACCTCTCCTaGCTGTTCAAGTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVGIDLS*LFKSFA
Trigger: GGCAAAAGACTTGAACAGCCAGGAGAGGTCTATACC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTACAGCTACTATCTGTaGCTGCATCCGCTAAACTGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVYSYYL*LHPLNW
Trigger: CCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKRICIL*VLSALI
Trigger: GATGAGTGCACTGAGGACCCATAGAATACAGATTCT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATGCAGTGCGGCATCAATaGATGTTTGAGATCTACTGT +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDAVRHQ*MFEIYC
Trigger: ACAGTAGATCTCAAACATCCATTGATGCCGCACTGC...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCGGTGATGGAGACACATaGGAAGATGGAGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLGDGDT*EDGGSR
Trigger: TCTGGAGCCTCCATCTTCCCATGTGTCTCCATCACC...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCACACTGCCATGGGTTTaGAAAGTAGGAGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVTLPWV*KVGDVV
Trigger: AACCACGTCTCCTACTTTCCAAACCCATGGCAGTGT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAGCAGGGACACTGCCATaGGTTTGGAAAGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: CTYPNKWNLVGANTKSTLAGTLP*VWKVGD
Trigger: GTCTCCTACTTTCCAAACCCATGGCAGTGTCCCTGC...TAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTATTGCAGGCAGAGCTTaGTGGCACAGCATTCACATT +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVIAGRA*WHSIHI
Trigger: AATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAAT...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCTTCCAGTAATTCCTTaGACACATTGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTLPVIP*THCRQS
Trigger: GCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCTTCCAGTAATTCCTTaGACACATTGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNLPVIP*THCRQS
Trigger: GCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAGAAAACTTCAGTTCTTaGCTAGGCTCATGGAAACTT +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTENFSS*LGSWKL
Trigger: AAGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTC...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGACCCACTATTGCCTTTaGTTGGCTCTTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTTHYCL*LALPLL
Trigger: AAGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTGCTGTCTTCCCAAGTaGAGGTTGTTACTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGCCLPK*RLLLSP
Trigger: GGGGGAAAGTAACAACCTCCACTTGGGAAGACAGCA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGAATATCCTTTTTAGATaGGCTGTCTGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLNILFR*AVWFLF
Trigger: GAAGAGAAACCAGACAGCCCATCTAAAAAGGATATT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGCATTTACGGCAGCTTaGTGTCCCTCAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGAFTAA*CPSKLP
Trigger: AGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTACTGCCCGAGGGCCATaGCATTCAAAGATCTCAAGT +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTTARGP*HSKISS
Trigger: ACTTGAGATCTTTGAATGCCATGGCCCTCGGGCAGT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATAGAATGGTTTTGCTATaGCCCTCCAGAGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNRMVLL*PSRVLR
Trigger: CCTCAGAACTCTGGAGGGCCATAGCAAAACCATTCT...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVIQWER*RLATEQ
Trigger: TTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTAT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGTGTGGTTAACAAAATaGCTTTCCCCAAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKVWLTK*LSPRTE
Trigger: TTCTGTCCTTGGGGAAAGCCATTTTGTTAACCACAC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTACTGCTCCACTATTTaGAAGCCAACCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGYCSTI*KPTTSR
Trigger: TCTGGAGGTGGTTGGCTTTCAAATAGTGGAGCAGTA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCTGACTTGTTACCAGTaGTGTCTTTCAATCCCGACT +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVLTCYQ*CLSIPT
Trigger: AGTCGGGATTGAAAGACATCACTGGTAACAAGTCAG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTTTCTCTATCATTTCTaGCTTGTTACCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTFLYHF*LVTSDV
Trigger: GACATCACTGGTAACAAGTCAGAAATGATAGAGAAA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTATTTGGATCTTGCTTTTaGGACAATGATTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVFGSCF*DNDLVA
Trigger: AGCCACTAAATCATTGTCTCAAAAGCAAGATCCAAA...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCTGTACCTTCCTCACTaGAGAAGCTATACACAGAAG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNLYLPH*RSYTQK
Trigger: CTTCTGTGTATAGCTTCTTCAGTGAGGAAGGTACAG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGCTACTACTTCTAACTaGGGATTAGGAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKATTSN*GLGISR
Trigger: CCTAGAAATTCCTAATCCTCAGTTAGAAGTAGTAGC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGAGGAGATCACAGTCTaGGTTTCTGCCACACTTACA +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTEEITV*VSATLT
Trigger: TGTAAGTGTGGCAGAAACTCAGACTGTGATCTCCTC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTATGGAGGCTGGCAACTaGACAAACCAAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGMEAGN*TNQKGS
Trigger: TGAACCCTTTTGGTTTGTTCAGTTGCCAGCCTCCAT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATGGAGGCTGGCAACTaGACAAACCAAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTMEAGN*TNQKGS
Trigger: TGAACCCTTTTGGTTTGTTCAGTTGCCAGCCTCCAT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCCACGTTCTGAGTTTTaGGGATCCAGAAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNPRSEF*GSRNKR
Trigger: CCTTTTGTTTCTGGATCCTCAAAACTCAGAACGTGG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTCCTCTGAAGGACACTaGACACTTTGGCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTSSEGH*TLWHSE
Trigger: TTCACTGTGCCAAAGTGTGCAGTGTCCTTCAGAGGA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000565611.5
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTACCTGGGTAAGCCTTTaGCCAGCTCTTGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGTWVSL*PALAFS
Trigger: AGAAAAAGCAAGAGCTGGGCAAAGGCTTACCCAGGT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCTAGGTGAAACCATCTaGTGGGGCTCATTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTLGETI*WGSFSL
Trigger: CAAAGAAAATGAGCCCCAGCAGATGGTTTCACCTAG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATACTTCTTGTTTGAGGTaGATGGTTGCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNTSCLR*MVAFWL
Trigger: GAGCCAGAAAGCAACCATGCACCTCAAACAAGAAGT...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGCTGTTCAAGTCTTTTaGCAAATGCATCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTAVQVF*QMHQRY
Trigger: ATACCTTTGATGCATTTGGCAAAAGACTTGAACAGC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTTGTTATCCATGCACTaGAATGACTTACTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLLLSMH*NDLLSS
Trigger: AGAACTTAGTAAGTCATTGCAGTGCATGGATAACAA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCAGGGCTGCACGGGCTTaGAGAAGATTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLRAARA*RRLLSM
Trigger: CATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCT...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATTCTATGGGTCCTCAGTaGACTCATCTCCATAGTTAT +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDSMGPQ*THLHSY
Trigger: ATAACTATGGAGATGAGTGCACTGAGGACCCATAGA...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGGAACCTGGTCTGGGTaGTCAGAAGGTTCATATGTT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGGTWSG*SEGSYV
Trigger: AACATATGAACCTTCTGAGCACCCAGACCAGGTTCC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTTTCTGGTATTTCTTTaGTCCACAGAAAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLFLVFL*STENFS
Trigger: ACTGAAGTTTTCTGTGGAGCAAAGAAATACCAGAAA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCCACACTTACAGGGATaGCATCTTTATAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGPHLQG*HLYSEC
Trigger: GCACTCGCTATAAAGATGGCATCCCTGTAAGTGTGG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATACCCAAATATCTGAATTaGATTTACGGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIPKYLN*IYGSLV
Trigger: CACCAAGCTGCCGTAAATGCAATTCAGATATTTGGG...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTGCAAAGAATGGTTTTaGTATGGCCCTCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTCKEWF*YGPPEF
Trigger: GAACTCTGGAGGGCCATAGCAAAACCATTCTTTGCA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCATTCACCACCTTCATaGAAAGAATGGTTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTHSPPS*KEWFCY
Trigger: ATAGCAAAACCATTCTTTGCATGAAGGTGGTGAATG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGATTCACCACAGTCACTaGATGATTGTGACCTTTATA +
Preference number: 4 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEIHHSH*MIVTFI
Trigger: TATAAAGGTCACAATCATGCAGTGACTGTGGTGAAT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGTCGTTCAATATGTCCTaGAGCATCCTGTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVSFNMS*SILFGS
Trigger: GGATCCAAACAGGATGCTGCAGGACATATTGAACGA...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAACCAAATCATCCACATaGCTCATCACTAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKTKSST*LITKVV
Trigger: GACAACTTTAGTGATGAGGCATGTGGATGATTTGGT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGAGCTCATATCCACTTaGATAAGGAAACCTAGTCTA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKELIST*IRKPSL
Trigger: TAGACTAGGTTTCCTTATGCAAGTGGATATGAGCTC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCGTGTTTCATCAGTTTaGGGCTCCTGTATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVRVSSV*GSCIPV
Trigger: TACAGGAATACAGGAGCCCCAAACTGATGAAACACG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAATGAACTACGCAGTTTaGATATGTAAGGACCATGGT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKMNYAV*ICKDHG
Trigger: ACCATGGTCCTTACATATCCAAACTGCGTAGTTCAT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCTTTCTGGCGAACTATaGGATTACATGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTLSGEL*DYMGKW
Trigger: CCACTTCCCCATGTAATCCCATAGTTCGCCAGAAAG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGGAATCCTTCTAGACTaGACAGATCAGGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGGILLD*TDQVPH
Trigger: ATGGGGAACCTGATCTGTCCAGTCTAGAAGGATTCC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGGAATCCTTCTAGACTaGACAGATCAGGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTGILLD*TDQVPH
Trigger: ATGGGGAACCTGATCTGTCCAGTCTAGAAGGATTCC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDRICIL*VLSALI
Trigger: GATGAGTGCACTGAGGACCCATAGAATACAGATTCT...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGCAGTGCGGCATCAATaGATGTTTGAGATCTACTGT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNAVRHQ*MFEIYC
Trigger: ACAGTAGATCTCAAACATCCATTGATGCCGCACTGC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCAGGCTCCAGAAAAAGTaGGAAAAAGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLRLQKK*EKGSGQ
Trigger: CTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCT...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATATCTAGCAGTGATGACTaGATAAACTGGACAACTGTC +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLISSSDD*INWTTV
Trigger: GACAGTTGTCCAGTTTATCCAGTCATCACTGCTAGA...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAACTATTGCCTTTGGTTaGCTCTTCCCCTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKTIAFG*LFPFFI
Trigger: AATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCAGCTGATGTCAAAGTaGATTCTGCCTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTQLMSK*ILPVVQ
Trigger: CTGAACAACAGGCAGAATCCACTTTGACATCAGCTG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCAGCTGATGTCAAAGTaGATTCTGCCTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNQLMSK*ILPVVQ
Trigger: CTGAACAACAGGCAGAATCCACTTTGACATCAGCTG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTAGACGAGTCACTATCTaGCTCATCTCTGACACTCTC +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGRRVTI*LISDTL
Trigger: GAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCAAAGCTTCCTTCTGTaGGTTCATCATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVQSFLL*VHHHLL
Trigger: CAGGAGATGATGATGAACCCACAGAAGGAAGCTTTG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCAAAGCTTCCTTCTGTaGGTTCATCATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNQSFLL*VHHHLL
Trigger: CAGGAGATGATGATGAACCCACAGAAGGAAGCTTTG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCCTTCATGCAAAGAATaGTTTTGCTATGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTPSCKE*FCYGPP
Trigger: TGGAGGGCCATAGCAAAACCATTCTTTGCATGAAGG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGAAGTTGGGATTAGTGTaGTCGGTCAGCAAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVKLGLV*SVSKCC
Trigger: ACAACACTTGCTGACCGACCACACTAATCCCAACTT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGGGAGAGATGGAGGCTaGCAACTGAACAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTGRDGG*QLNKPK
Trigger: TTTTGGTTTGTTCAGTTGCCAGCCTCCATCTCTCCC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTATACAGTGGGAGAGATaGAGGCTGGCAACTGAACAA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGIQWER*RLATEQ
Trigger: TTGTTCAGTTGCCAGCCTCCATCTCTCCCACTGTAT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCTGACTTGTTACCAGTaGTGTCTTTCAATCCCGACT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGLTCYQ*CLSIPT
Trigger: AGTCGGGATTGAAAGACATCACTGGTAACAAGTCAG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTCAGAAGAGGCCTTGTaGTTAAGAGATCCAGTATGT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNSEEAL*LRDPVC
Trigger: ACATACTGGATCTCTTAATCACAAGGCCTCTTCTGA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTTGCTTTTGAGACAATaGTTTAGTGGCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVLLLRQ*FSGWTW
Trigger: CCATGTCCAGCCACTAAATCATTGTCTCAAAAGCAA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATATCCATGCACTGCAATaGCTTACTAAGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDIHALQ*LTKFFL
Trigger: GAGGAAGAACTTAGTAAGTCATTGCAGTGCATGGAT...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTASMDV*DLLFLR
Trigger: ACGAAGGAACAGTAGATCTCAAACATCCATTGATGC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDASMDV*DLLFLR
Trigger: ACGAAGGAACAGTAGATCTCAAACATCCATTGATGC...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR TCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
40% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCCACGTTCTGAGTTTTaGGGATCCAGAAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGPRSEF*GSRNKR
Trigger: CCTTTTGTTTCTGGATCCTCAAAACTCAGAACGTGG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTACTTCTTGTTTGAGGTaGATGGTTGCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTTSCLR*MVAFWL
Trigger: GAGCCAGAAAGCAACCATGCACCTCAAACAAGAAGT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTTTGTTATCCATGCACTaGAATGACTTACTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTLLSMH*NDLLSS
Trigger: AGAACTTAGTAAGTCATTGCAGTGCATGGATAACAA...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTCTATGGGTCCTCAGTaGACTCATCTCCATAGTTAT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNSMGPQ*THLHSY
Trigger: ATAACTATGGAGATGAGTGCACTGAGGACCCATAGA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAGTTTCTAGTGGGTTTTaGTCTGTAGAGTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKVSSGF*SVEFQI
Trigger: TATTTGGAACTCTACAGAGCAAAACCCACTAGAAAC...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAATTCACCACAGTCACTaGATGATTGTGACCTTTATA +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKIHHSH*MIVTFI
Trigger: TATAAAGGTCACAATCATGCAGTGACTGTGGTGAAT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGCATATATCACTATATaGCATGCTGTCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNAYITI*HAVPEK
Trigger: CTTCTCTGGGACAGCATGGCATATAGTGATATATGC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAAAACTGTATTCAGATaGTTTATTCTAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTKTVFR*FILTPS
Trigger: AGAGGGGGTTAGAATAAAGCATCTGAATACAGTTTT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGGACACTGCACACTTTaGCACAGTGAAAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNGHCTL*HSEKLV
Trigger: CACTAATTTTTCACTGTGCCAAAGTGTGCAGTGTCC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000565611.5
CDS-3UTR CCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATTGTGTTTTCTGTGTTaGGGAATTACGTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKLCFLC*GITCFI
Trigger: GATGAAACACGTAATTCCCCAACACAGAAAACACAA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCACACTGCCATGGGTTTaGAAAGTAGGAGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLTLPWV*KVGDVV
Trigger: AACCACGTCTCCTACTTTCCAAACCCATGGCAGTGT...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp TGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAATTGCAGGCAGAGCTTaGTGGCACAGCATTCACATT +
Preference number: 4 (lower is better)
Translates to: CTYPNKWNLVGANTKSTLIAGRA*WHSIHI
Trigger: AATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAAT...TAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGATGACTGGATAAACTaGACAACTGTCACTGATCTC +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNDDWIN*TTVTDL
Trigger: GAGATCAGTGACAGTTGTCCAGTTTATCCAGTCATC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCAAAGCTTCCTTCTGTaGGTTCATCATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGQSFLL*VHHHLL
Trigger: CAGGAGATGATGATGAACCCACAGAAGGAAGCTTTG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCAAAGCTTCCTTCTGTaGGTTCATCATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTQSFLL*VHHHLL
Trigger: CAGGAGATGATGATGAACCCACAGAAGGAAGCTTTG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTAAGTTGGGATTAGTGTaGTCGGTCAGCAAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGKLGLV*SVSKCC
Trigger: ACAACACTTGCTGACCGACCACACTAATCCCAACTT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCTAGAACCGTTCATTTaGGGTAACACACTAATCTGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVLEPFI*GNTLIW
Trigger: CCAGATTAGTGTGTTACCCCAAATGAACGGTTCTAG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTTTTGCAATGACTCATaGCACTGTAGCACCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTFCNDS*HCSTSL
Trigger: CAAAGAGGTGCTACAGTGTCATGAGTCATTGCAAAA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGCTTCTTGTTCATTTTaGACAAGGGGTACCATTTCT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNASCSF*TRGTIS
Trigger: AGAAATGGTACCCCTTGTTCAAAATGAACAAGAAGC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGCTACTACTTCTAACTaGGGATTAGGAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVATTSN*GLGISR
Trigger: CCTAGAAATTCCTAATCCTCAGTTAGAAGTAGTAGC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGCTACTACTTCTAACTaGGGATTAGGAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTATTSN*GLGISR
Trigger: CCTAGAAATTCCTAATCCTCAGTTAGAAGTAGTAGC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTTAACTTTGGAGGTATaGCCCTCAAAGACACCAATA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVLTLEV*PSKTPI
Trigger: TATTGGTGTCTTTGAGGGTCATACCTCCAAAGTTAA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR TCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCAGTCAGGTGTCATCTaGTTTCATTCTTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVQSGVI*FHSSNP
Trigger: TGGATTAGAAGAATGAAATCAGATGACACCTGACTG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATTCTACATTTCTACTTaGTTTTGCATAGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKFYIST*FCIVPG
Trigger: ACCAGGAACTATGCAAAAGCAAGTAGAAATGTAGAA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAGCTGTTCAAGTCTTTTaGCAAATGCATCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLIAVQVF*QMHQRY
Trigger: ATACCTTTGATGCATTTGGCAAAAGACTTGAACAGC...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAATTGTTATCCATGCACTaGAATGACTTACTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKLLSMH*NDLLSS
Trigger: AGAACTTAGTAAGTCATTGCAGTGCATGGATAACAA...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGATCTCCATAGTTATCTaGTGCTTGAGCATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVISIVI*CLSISS
Trigger: GCTACTTATGCTCAAGCAGCAGATAACTATGGAGAT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCATCTCCATAGTTATCTaGTGCTTGAGCATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVISIVI*CLSISS
Trigger: GCTACTTATGCTCAAGCAGCAGATAACTATGGAGAT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCCCAAATATCTGAATTaGATTTACGGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGPKYLN*IYGSLV
Trigger: CACCAAGCTGCCGTAAATGCAATTCAGATATTTGGG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCCCAAATATCTGAATTaGATTTACGGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTPKYLN*IYGSLV
Trigger: CACCAAGCTGCCGTAAATGCAATTCAGATATTTGGG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAAGCCAGTGTAAATCATaGTTTTATGGATGGTCATAC +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLISQCKS*FYGWSY
Trigger: GTATGACCATCCATAAAAGCATGATTTACACTGGCT...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCACTATTGCCTTTGGTTaGCTCTTCCCCTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVTIAFG*LFPFFI
Trigger: AATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATCTTAGAAAAGAACTaGTACAGGCTTCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTILEKN*YRLQTH
Trigger: GTGGGTCTGAAGCCTGTACCAGTTCTTTTCTAAGAT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGTGTGGTTAACAAAATaGCTTTCCCCAAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGVWLTK*LSPRTE
Trigger: TTCTGTCCTTGGGGAAAGCCATTTTGTTAACCACAC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR TCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAAAGCAAGAAAACAGTaGCACACACTGCACATAATT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVKARKQ*HTLHII
Trigger: AATTATGTGCAGTGTGTGTCACTGTTTTCTTGCTTT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTCCATAGTTATCTGCTaGTTGAGCATAAGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLSIVIC*LSISSL
Trigger: GAGGCTACTTATGCTCAAGCAGCAGATAACTATGGA...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGTTTCTAGTGGGTTTTaGTCTGTAGAGTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVVSSGF*SVEFQI
Trigger: TATTTGGAACTCTACAGAGCAAAACCCACTAGAAAC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCATTCACCACCTTCATaGAAAGAATGGTTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTHSPPS*KEWFCY
Trigger: ATAGCAAAACCATTCTTTGCATGAAGGTGGTGAATG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAGCCAGTGTAAATCATaGTTTTATGGATGGTCATAC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVSQCKS*FYGWSY
Trigger: GTATGACCATCCATAAAAGCATGATTTACACTGGCT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGAGCCAGTGTAAATCATaGTTTTATGGATGGTCATAC +
Preference number: 4 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTSQCKS*FYGWSY
Trigger: GTATGACCATCCATAAAAGCATGATTTACACTGGCT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCATAAGCAGCCAAAATaGTTATGGTCCCTTTATTTC +
Preference number: 4 (lower is better)
Translates to: HYFINVAGMAFVILEAPVHKQPK*LWSLYF
Trigger: GAAATAAAGGGACCATAAGCATTTTGGCTGCTTATG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGGGGTACCATTTCTATaGCAAACCAGATCTGTTATT +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTGVPFL*QTRSVI
Trigger: AATAACAGATCTGGTTTGGCATAGAAATGGTACCCC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565611.5
CDS-3UTR CCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTCATCTTCTCTTTCCTaGGCATCAACGTTATCTTTG +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGSSSLS*ASTLSL
Trigger: CAAAGATAACGTTGATGCCCAGGAAAGAGAAGATGA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATATCAGAGTTTATTTCTTaGTTGCTATTGGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: DILIGNRGERWEKLLNLISEFIS*LLLEGS
Trigger: TGAACCTTCCAATAGCAACCAAGAAATAAACTCTGA...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAATATCCTTTTTAGATaGGCTGTCTGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVNILFR*AVWFLF
Trigger: GAAGAGAAACCAGACAGCCCATCTAAAAAGGATATT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTGTCCCAGAGAAGTATaGTTCCTTAACATTTGTCTA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVCPREV*FLNICL
Trigger: TAGACAAATGTTAAGGAACCATACTTCTCTGGGACA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCTGATCCTCAAAGTCTaGCACTTAAACAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVLILKV*HLNKLV
Trigger: TACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CCA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATATAAATGGAACCTTGTaGGTGCTAATACAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDINGTL*VLIQSQ
Trigger: TTGACTTTGTATTAGCACCCACAAGGTTCCATTTAT...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTTCTACATTTCTACTTaGTTTTGCATAGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNFYIST*FCIVPG
Trigger: ACCAGGAACTATGCAAAAGCAAGTAGAAATGTAGAA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR GCA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTGCTGTTCAAGTCTTTTaGCAAATGCATCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGAVQVF*QMHQRY
Trigger: ATACCTTTGATGCATTTGGCAAAAGACTTGAACAGC...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTTGTTATCCATGCACTaGAATGACTTACTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNLLSMH*NDLLSS
Trigger: AGAACTTAGTAAGTCATTGCAGTGCATGGATAACAA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTTGTTATCCATGCACTaGAATGACTTACTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVLLSMH*NDLLSS
Trigger: AGAACTTAGTAAGTCATTGCAGTGCATGGATAACAA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAATCTCCATAGTTATCTaGTGCTTGAGCATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CTYPNKWNLVGANTKSTLISIVI*CLSISS
Trigger: GCTACTTATGCTCAAGCAGCAGATAACTATGGAGAT...TAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTTTCTGGTATTTCTTTaGTCCACAGAAAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: YITICHAVPEKYGSLTFVFLVFL*STENFS
Trigger: ACTGAAGTTTTCTGTGGAGCAAAGAAATACCAGAAA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCATTCACCACCTTCATaGAAAGAATGGTTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTHSPPS*KEWFCY
Trigger: ATAGCAAAACCATTCTTTGCATGAAGGTGGTGAATG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTAGCCAGTGTAAATCATaGTTTTATGGATGGTCATAC +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTSQCKS*FYGWSY
Trigger: GTATGACCATCCATAAAAGCATGATTTACACTGGCT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATAAAACTGTATTCAGATaGTTTATTCTAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: HYMPCCPREVWFLNICLNKTVFR*FILTPS
Trigger: AGAGGGGGTTAGAATAAAGCATCTGAATACAGTTTT...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR GCA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGATGTAAGCATAAACTaGAGTTATTTGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVDVSIN*SYLSKP
Trigger: TGGTTTGCTCAAATAACTGCAGTTTATGCTTACATC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CCA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATACTTATCCTAATAAATaGAACCTTGTGGGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDTYPNK*NLVGAN
Trigger: ATTAGCACCCACAAGGTTCCATTTATTAGGATAAGT...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR GCA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTTTCTGGTATTTCTTTaGTCCACAGAAAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTFLVFL*STENFS
Trigger: ACTGAAGTTTTCTGTGGAGCAAAGAAATACCAGAAA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR GCA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTTGTTATCCATGCACTaGAATGACTTACTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: FVLILINGTLWVLIQSQLLLSMH*NDLLSS
Trigger: AGAACTTAGTAAGTCATTGCAGTGCATGGATAACAA...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTACGCCCCCTTCAGTTTaGGGTCCGGGAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSTPPSV*GPGACS
Trigger: GGAGCAGGCTCCCGGACCCAAAACTGAAGGGGGCGT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTACGCCCCCTTCAGTTTaGGGTCCGGGAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSATPPSV*GPGACS
Trigger: GGAGCAGGCTCCCGGACCCAAAACTGAAGGGGGCGT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTGCCGTAGGGTTGGCTaGAGCCCAGACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSCRRVG*SPDSFS
Trigger: AGAGAAGGAGTCTGGGCTCAAGCCAACCCTACGGCA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAAAAGGCTTCGCTTTCTaGCCAAGCCAGGGGACGAGG +
Preference number: 5 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAKGFAF*PSQGTR
Trigger: CCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTT...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTACCCGGAACGTCCTCTaGGTCCACCACCATTCCTCA +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSATRNVL*VHHHSS
Trigger: TGAGGAATGGTGGTGGACCAAGAGGACGTTCCGGGT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCTACTGCTCCACTATTaGAAAGCCAACCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRLLLHY*KANHLQ
Trigger: CTGGAGGTGGTTGGCTTTCAAATAGTGGAGCAGTAG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGACGAGGCTTTTCCCTaGCCGCACTGCCATTCTTTC +
Preference number: 5 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAADEAFP*PHCHSF
Trigger: GAAAGAATGGCAGTGCGGCAAGGGAAAAGCCTCGTC...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTAAAGGCTTCGCTTTCTaGCCAAGCCAGGGGACGAGG +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAKGFAF*PSQGTR
Trigger: CCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAAGGAGACGTGGTTATTaGAAGAGAGGCTCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRRRRGY*KRGSGG
Trigger: CCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAGGAGACGTGGTTATTaGAAGAGAGGCTCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERRRRGY*KRGSGG
Trigger: CCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAAGTGGATTCTGCCTGTaGTTCAGGCTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAASGFCL*FRLVSW
Trigger: CCAGCTGACCAGCCTGAACAACAGGCAGAATCCACT...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAGTGGATTCTGCCTGTaGTTCAGGCTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSSGFCL*FRLVSW
Trigger: CCAGCTGACCAGCCTGAACAACAGGCAGAATCCACT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTACCATGTCCCAAAGCTaGGTATGTGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSATMSQS*VCGPGL
Trigger: GAGCCCAGGGCCACATACCAAGCTTTGGGACATGGT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS TCA 90 bp AGGGTTGGCTTGAGCCCAGACTCCTTCTCTGTCTCACTCTTTCGGTaGCCGCTAATATTGCGAATGCGGCGGGCACTATTGAGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: RVGLSPDSFSVSLFR*PLILRMRRALLRFG
Trigger: GCCAAACCTCAATAGTGCCCGCCGCATTCGCAATATTAGCGGTCACCGAAAGAGTGAGACAGAGAAGGAGTCTGGGCTCAAGCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS GCA 90 bp CCTGTTCGGAGGGAGGCAGCCCGAGGTGTCACTTCTTGTTTGAGGTaGATGGTTGCTTTCTGGCTCTGTCCAGCCCTCAATGAGTTACTA +
Preference number: 5 (lower is better)
Translates to: PVRREAARGVTSCLR*MVAFWLCPALNELL
Trigger: TAGTAACTCATTGAGGGCTGGACAGAGCCAGAAAGCAACCATGCACCTCAAACAAGAAGTGACACCTCGGGCTGCCTCCCTCCGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGACACTGCCATGGGTTaGGAAAGTAGGAGACGTGGT +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSDTAMG*ESRRRG
Trigger: ACCACGTCTCCTACTTTCCAAACCCATGGCAGTGTC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERNSLDT*QAELGG
Trigger: GCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAGCTTCAGACCCACTATaGCCTTTGGTTGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERASDPL*PLVGSS
Trigger: GGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAGC...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGACCTGCAGCATCCTGTTaGGATCCTTTCCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERPAASC*DPFLAV
Trigger: CACTGCTAGGAAAGGATCCAAACAGGATGCTGCAGG...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGGCTCACAGACCCTCTaGAAGCCTATCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAAGSQTL*KPIHKP
Trigger: GGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGCC...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAATGCCAAACCTGCCCTaGAGGTTCTCAAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERMPNLP*RFSSSL
Trigger: CAGGGAACTTGAGAACCTCAAGGGCAGGTTTGGCAT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565380.5
CDS TCA 90 bp GCACACTCGGCACTCATGACTAATGTCCCTAGGGAAAGAGGGAGATaGGGGACATTCAATTCTCCCCACTGGCATGGCACACTCACCAGA +
Preference number: 5 (lower is better)
Translates to: AHSALMTNVPRERGR*GTFNSPHWHGTLTR
Trigger: TCTGGTGAGTGTGCCATGCCAGTGGGGAGAATTGAATGTCCCTCATCTCCCTCTTTCCCTAGGGACATTAGTCATGAGTGCCGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS TCA 90 bp GAATTTCTAGGACTTCCAGAGACGAGTCACTATCTGGCTCATCTCTaGCACTCTCCTGCTCCCGACCAGTCCTGCTGTCTTCCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: EFLGLPETSHYLAHL*HSPAPDQSCCLPKW
Trigger: CCACTTGGGAAGACAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCTCTGGAAGTCCTAGAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS GCA 90 bp AGCTCTGTCCATGATCACGCTGCTCTCAGAAAGGCTTCGCTTTCTTaGCAAGCCAGGGGACGAGGAAATGGAAACACCTTCCCACTGGAA +
Preference number: 5 (lower is better)
Translates to: SSVHDHAALRKASLS*QARGRGNGNTFPLE
Trigger: TTCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTTCTGAGAGCAGCGTGATCATGGACAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS GCA 90 bp ACTTCCAGAGACGAGTCACTATCTGGCTCATCTCTGACACTCTCCTaGTCCCGACCAGTCCTGCTGTCTTCCCAAGTGGAGGTTGTTACT +
Preference number: 5 (lower is better)
Translates to: TSRDESLSGSSLTLS*SRPVLLSSQVEVVT
Trigger: AGTAACAACCTCCACTTGGGAAGACAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCTCTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS CCA 90 bp CAGCACCAGAGGTACAGCTACTATCTGTGGCTGCATCCGCTAAACTaGAGATCGCAAGGGCTGAGGATGCGCTTGATGACAGACAGTTTC +
Preference number: 5 (lower is better)
Translates to: QHQRYSYYLWLHPLN*RSQGLRMRLMTDSF
Trigger: GAAACTGTCTGTCATCAAGCGCATCCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTACCTCTGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGATGGGGCTCATTTTCTTaGCCTGTACCTTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERWGSFS*PVPSSL
Trigger: CAGTGAGGAAGGTACAGGCAAAGAAAATGAGCCCCA...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGACACTGCCATGGGTTaGGAAAGTAGGAGACGTGGT +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSADTAMG*ESRRRG
Trigger: ACCACGTCTCCTACTTTCCAAACCCATGGCAGTGTC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGCTTCAGACCCACTATaGCCTTTGGTTGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAASDPL*PLVGSS
Trigger: GGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAGC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGAACCCACAGAACAGTTaGGCTTCTCTGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRNPQNS*ASLDIL
Trigger: AAGGATATCCAGAGAAGCCAAACTGTTCTGTGGGTT...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCCATATACTTGGGCTaGGAGGTGAGGTTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSAIYLG*EVRLEV
Trigger: AACCTCTAACCTCACCTCCAAGCCCAAGTATATGGC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS TCA 90 bp AGTGGGAAAAAGGGAGTGGGCAGCAGTGCGGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGTTCTCGTGTGAGGCTACAGGGAACC +
Preference number: 5 (lower is better)
Translates to: SGKKGVGSSAASMDV*DLLFLRSRVRLQGT
Trigger: GGTTCCCTGTAGCCTCACACGAGAACGAAGGAACAGTAGATCTCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS GCA 90 bp CAGCAGTTTTCGGGCACCTTCCTGAGCTGTAGCAAGACAGCTGACTaGCCGAGGGCCATGGCATTCAAAGATCTCAAGTCGTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: QQFSGTFLSCSKTAD*PRAMAFKDLKSFVV
Trigger: AACAACAAACGACTTGAGATCTTTGAATGCCATGGCCCTCGGGCAGTCAGCTGTCTTGCTACAGCTCAGGAAGGTGCCCGAAAACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000569648.5
ENST00000570078.1
CDS CCA 90 bp GCAGCCCGAGGTGTCACTTCTTGTTTGAGGTGCATGGTTGCTTTCTaGCTCTGTCCAGCCCTCAATGAGTTACTAGGTGAAACCATCTGC +
Preference number: 5 (lower is better)
Translates to: AARGVTSCLRCMVAF*LCPALNELLGETIC
Trigger: GCAGATGGTTTCACCTAGTAACTCATTGAGGGCTGGACAGAGCCAGAAAGCAACCATGCACCTCAAACAAGAAGTGACACCTCGGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 90 bp TTTGGCCATCATTTTGTTCAGCACCAGAGGTACAGCTACTATCTGTaGCTGCATCCGCTAAACTGGAGATCGCAAGGGCTGAGGATGCGC +
Preference number: 5 (lower is better)
Translates to: FGHHFVQHQRYSYYL*LHPLNWRSQGLRMR
Trigger: GCGCATCCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTACCTCTGGTGCTGAACAAAATGATGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS-3UTR CAA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATGCCGTAGGGTTGGCTaGAGCCCAGACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLCRRVG*SPDSFS
Trigger: AGAGAAGGAGTCTGGGCTCAAGCCAACCCTACGGCA...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGGGCTGAGGATGCGCTaGATGACAGACAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYGLRMR*MTDSFP
Trigger: AGGGAAACTGTCTGTCATCAAGCGCATCCTCAGCCC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCACGGGCTTGCAGAAGATaGTTATCCATGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAARACRR*LSMHCN
Trigger: ATTGCAGTGCATGGATAACAATCTTCTGCAAGCCCG...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCGGGCTTGCAGAAGATaGTTATCCATGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSRACRR*LSMHCN
Trigger: ATTGCAGTGCATGGATAACAATCTTCTGCAAGCCCG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAASSNS*DTLQAE
Trigger: CTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAAGCAGGGCCATATACTaGGGCTTGGAGGTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGSRAIY*GLEVRL
Trigger: TAACCTCACCTCCAAGCCCAAGTATATGGCCCTGCT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS CCA 90 bp TCTCAGAAAGGCTTCGCTTTCTTGCCAAGCCAGGGGACGAGGAAATaGAAACACCTTCCCACTGGAATCCTTCTAGACTGGACAGATCAG +
Preference number: 5 (lower is better)
Translates to: SQKGFAFLPSQGTRK*KHLPTGILLDWTDQ
Trigger: CTGATCTGTCCAGTCTAGAAGGATTCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 90 bp CTAGTCTCAGCTGATGTCAAAGTGGATTCTGCCTGTTGTTCAGGCTaGTCAGCTGGAGAGTGGGGTTCCTTCTCCAAAGGGGTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LVSADVKVDSACCSG*SAGEWGSFSKGVSE
Trigger: TTCAGAAACCCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAACAACAGGCAGAATCCACTTTGACATCAGCTGAGACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTGCAACTGTACCAAGTTaGTCATTTTCTTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAATVPS*SFSCRC
Trigger: GCAGCGGCAAGAAAATGACAAACTTGGTACAGTTGC...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGACGAGGCTTTTCCCTaGCCGCACTGCCATTCTTTC +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGDEAFP*PHCHSF
Trigger: GAAAGAATGGCAGTGCGGCAAGGGAAAAGCCTCGTC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTCACTGTAGCACCTCTTaGGCCTTTCGTAAAGTATCA +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSHCSTS*AFRKVS
Trigger: TGATACTTTACGAAAGGCCAAAGAGGTGCTACAGTG...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGGGCTGAGGATGCGCTaGATGACAGACAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGGLRMR*MTDSFP
Trigger: AGGGAAACTGTCTGTCATCAAGCGCATCCTCAGCCC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGGCTGAGGATGCGCTaGATGACAGACAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGLRMR*MTDSFP
Trigger: AGGGAAACTGTCTGTCATCAAGCGCATCCTCAGCCC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAAAGGGCTGCACGGGCTaGCAGAAGATTGTTATCCAT +
Preference number: 5 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGKGCTG*QKIVIH
Trigger: ATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCTT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAGGAGACGTGGTTATTaGAAGAGAGGCTCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGRRRGY*KRGSGG
Trigger: CCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAATTCACATTCTCATCTaGTTCAGGAGACATGGGCTC +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERIHILI*FRRHGL
Trigger: GAGCCCATGTCTCCTGAACAAGATGAGAATGTGAAT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCATTGCAGGCAGAGCTaGGTGGCACAGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYHCRQS*VAQHSH
Trigger: ATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGACCCACTATTGCCTTaGGTTGGCTCTTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYDPLLP*VGSSPS
Trigger: AGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAA +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSKPTLG*QGQTLE
Trigger: TTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGGCTCACAGACCCTCTaGAAGCCTATCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYGSQTL*KPIHKP
Trigger: GGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGCC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTTGCAGTAGTATGATCTaGGCTCACTGCAACTTCTAC +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSCSSMI*AHCNFY
Trigger: GTAGAAGTTGCAGTGAGCCAAGATCATACTACTGCA...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAAACAGCTTTTCCTCCTaGACCCCCTCCTTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGNSFSS*TPSFPN
Trigger: ATTGGGAAAGGAGGGGGTCAAGGAGGAAAAGCTGTT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS TCA 90 bp CGGCATCAATGGATGTTTGAGATCTACTGTTCCTTCGTTCTCGTGTaGGGCTACAGGGAACCTGGTCTGGGTGCTCAGAAGGTTCATATG +
Preference number: 5 (lower is better)
Translates to: RHQWMFEIYCSFVLV*GYREPGLGAQKVHM
Trigger: CATATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGAACAGTAGATCTCAAACATCCATTGATGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS TCA 90 bp TTGGAAAGTAGGAGACGTGGTTATTTGAAGAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGATGGAGGCTCCAGAAAAAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LESRRRGYLKRGSGG*WRHMGRWRLQKKWE
Trigger: TTCCCACTTTTTCTGGAGCCTCCATCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCTACTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS GCA 90 bp AGATGGAGGCTCCAGAAAAAGTGGGAAAAAGGGAGTGGGCAGCAGTaGGGCATCAATGGATGTTTGAGATCTACTGTTCCTTCGTTCTCG +
Preference number: 5 (lower is better)
Translates to: RWRLQKKWEKGSGQQ*GINGCLRSTVPSFS
Trigger: CGAGAACGAAGGAACAGTAGATCTCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 90 bp ACACATGGGAAGATGGAGGCTCCAGAAAAAGTGGGAAAAAGGGAGTaGGCAGCAGTGCGGCATCAATGGATGTTTGAGATCTACTGTTCC +
Preference number: 5 (lower is better)
Translates to: THGKMEAPEKVGKRE*AAVRHQWMFEIYCS
Trigger: GGAACAGTAGATCTCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCTCCATCTTCCCATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS-3UTR CAA 90 bp CACTCTCATCTTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCATCACCAGATCTGTTATaGTTTCCTCTGAAGGACACT +
Preference number: 5 (lower is better)
Translates to: HSHLFDTSSGRAEGHYAASPDLL*FPLKDT
Trigger: AGTGTCCTTCAGAGGAAACAATAACAGATCTGGTGA...TGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAAGATGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAAGGTGTACTCCAGTTTaGCTCTTCAAACTAATGTGC +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERRCTPV*LFKLMC
Trigger: GCACATTAGTTTGAAGAGCAAAACTGGAGTACACCT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAAGGTGTACTCCAGTTTaGCTCTTCAAACTAATGTGC +
Preference number: 5 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRRCTPV*LFKLMC
Trigger: GCACATTAGTTTGAAGAGCAAAACTGGAGTACACCT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTATGCGGCGGGCACTATaGAGGTTTGGCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTMRRAL*RFGSGR
Trigger: CCTTCCTGAGCCAAACCTCAATAGTGCCCGCCGCAT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGAATGACCTGTTCCCAGTaGACATTTCTCCGAGATGCA +
Preference number: 5 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGMTCSQ*TFLRDA
Trigger: TGCATCTCGGAGAAATGTCAACTGGGAACAGGTCAT...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGCCGAGGTGTCACTTCTaGTTTGAGGTGCATGGTTGC +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGPRCHF*FEVHGC
Trigger: GCAACCATGCACCTCAAACAAGAAGTGACACCTCGG...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGGCTGTTCAAGTCTTTaGCCAAATGCATCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSGCSSL*PNASKV
Trigger: TACCTTTGATGCATTTGGCAAAAGACTTGAACAGCC...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGCATTGCAGGCAGAGCTaGGTGGCACAGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGHCRQS*VAQHSH
Trigger: ATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATG...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYASSNS*DTLQAE
Trigger: CTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAGAAAACTTCAGTTCTaGGCTAGGCTCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSRKLQF*ARLMET
Trigger: AGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTCT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAAGCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCCACTATTGCCTTTGGTaGGCTCTTCCCCTTCTTTAT +
Preference number: 5 (lower is better)
Translates to: KAPLRVCEFGCSQWPGRVHYCLW*ALPLLY
Trigger: ATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTG...GACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATGCATTTACGGCAGCTaGGTGTCCCTCAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLCIYGS*VSLKAS
Trigger: GGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGCA...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCTGCATTTACGGCAGCTaGGTGTCCCTCAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSCIYGS*VSLKAS
Trigger: GGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGCA...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGCCTGCAGCATCCTGTTaGGATCCTTTCCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMPAASC*DPFLAV
Trigger: CACTGCTAGGAAAGGATCCAAACAGGATGCTGCAGG...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGACCATGTCCCAAAGCTaGGTATGTGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLETMSQS*VCGPGL
Trigger: GAGCCCAGGGCCACATACCAAGCTTTGGGACATGGT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGGCTCACAGACCCTCTaGAAGCCTATCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGGSQTL*KPIHKP
Trigger: GGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGCC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACTCAAATGCCTGACCTaGAGTGATCCACCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTLKCLT*SDPPAS
Trigger: CGAGGCGGGTGGATCACTCAAGGTCAGGCATTTGAG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCTCAAATGCCTGACCTaGAGTGATCCACCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTLKCLT*SDPPAS
Trigger: CGAGGCGGGTGGATCACTCAAGGTCAGGCATTTGAG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCTCAAATGCCTGACCTaGAGTGATCCACCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLELKCLT*SDPPAS
Trigger: CGAGGCGGGTGGATCACTCAAGGTCAGGCATTTGAG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAACAGAAGTCAAGAGCTaGTGGGGCCATATATTATCT +
Preference number: 5 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRTEVKS*WGHILS
Trigger: AGATAATATATGGCCCCACAAGCTCTTGACTTCTGT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCAGCAGGGCCATATACTaGGGCTTGGAGGTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSSRAIY*GLEVRL
Trigger: TAACCTCACCTCCAAGCCCAAGTATATGGCCCTGCT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAGGCCTTTCCCAATTTATTaGGGTCACTACCTTGAATTT +
Preference number: 5 (lower is better)
Translates to: FDTSSGRAEGHYAAEHSRPFPIY*GHYLEF
Trigger: AAATTCAAGGTAGTGACCCAAATAAATTGGGAAAGG...CCTCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCGTCCATCTCCTTTTTaGAGCTGTACACGATGTGGC +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYRPSPF*SCTRCG
Trigger: GCCACATCGTGTACAGCTCAAAAAAGGAGATGGACG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS TCA 90 bp CTTCTTCCGGAGTTTCTTCTTTTTCTTGCTTCCCCTAGTCTCAGCTaGTGTCAAAGTGGATTCTGCCTGTTGTTCAGGCTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLPEFLLFLASPSLS*CQSGFCLLFRLVSW
Trigger: CCAGCTGACCAGCCTGAACAACAGGCAGAATCCACTTTGACATCAGCTGAGACTAGGGGAAGCAAGAAAAAGAAGAAACTCCGGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS GCA 90 bp TTCTGGCTCTGTCCAGCCCTCAATGAGTTACTAGGTGAAACCATCTaGTGGGGCTCATTTTCTTTGCCTGTACCTTCCTCACTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FWLCPALNELLGETI*WGSFSLPVPSSLKK
Trigger: CTTCTTCAGTGAGGAAGGTACAGGCAAAGAAAATGAGCCCCAGCAGATGGTTTCACCTAGTAACTCATTGAGGGCTGGACAGAGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS GCA 90 bp AAGTCGTTTGTTGTTCTTTATGTTGAAGGTGACCACAGTGCCATTTaGCAGTCCCGCATAGAGGATTCGCCATCTACTGTGGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KSFVVLYVEGDHSAI*QSRIEDSPSTVEAE
Trigger: CTCTGCCTCCACAGTAGATGGCGAATCCTCTATGCGGGACTGGCAAATGGCACTGTGGTCACCTTCAACATAAAGAACAACAAACGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000569648.5
CDS CCA 90 bp TCGGTGACCGCTAATATTGCGAATGCGGCGGGCACTATTGAGGTTTaGCTCAGGAAGGTGTACTCCAGTTTTGCTCTTCAAACTAATGTG +
Preference number: 5 (lower is better)
Translates to: SVTANIANAAGTIEV*LRKVYSSFALQTNV
Trigger: CACATTAGTTTGAAGAGCAAAACTGGAGTACACCTTCCTGAGCCAAACCTCAATAGTGCCCGCCGCATTCGCAATATTAGCGGTCACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 90 bp GTCAAAGTGGATTCTGCCTGTTGTTCAGGCTGGTCAGCTGGAGAGTaGGGTTCCTTCTCCAAAGGGGTTTCTGAAGCAAAAGACAATCTT +
Preference number: 5 (lower is better)
Translates to: VKVDSACCSGWSAGE*GSFSKGVSEAKDNL
Trigger: AAGATTGTCTTTTGCTTCAGAAACCCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAACAACAGGCAGAATCCACTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS CCA 90 bp GTCAAAGTGGATTCTGCCTGTTGTTCAGGCTGGTCAGCTGGAGAGTaGGGTTCCTTCTCCAAAGGGGTTTTATTAGCTTCCAGTAATTCC +
Preference number: 5 (lower is better)
Translates to: VKVDSACCSGWSAGE*GSFSKGVLLASSNS
Trigger: GGAATTACTGGAAGCTAATAAAACCCCTTTGGAGAAGGAACCCCACTCTCCAGCTGACCAGCCTGAACAACAGGCAGAATCCACTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565500.5
CDS-3UTR CAA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTACTACTGCTCCACTATTaGAAAGCCAACCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLLLLHY*KANHLQ
Trigger: CTGGAGGTGGTTGGCTTTCAAATAGTGGAGCAGTAG...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCTTCCACAGTGGGCTaGTTCGAGGGATTTGAGTGT +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGSSTVG*FEGFEC
Trigger: ACACTCAAATCCCTCGAACAAGCCCACTGTGGAAGA...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCTAGGGTTCCAATTTTaGTTCCATGCTTTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSALGFQF*FHAFPC
Trigger: ACACGGAAAAGCATGGAACAAAAATTGGAACCCTAG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGGTGTCACTTCTTGTTaGAGGTGCATGGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYGVTSC*RCMVAF
Trigger: GAAAGCAACCATGCACCTCAAACAAGAAGTGACACC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCCGAGGTGTCACTTCTaGTTTGAGGTGCATGGTTGC +
Preference number: 5 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLPRCHF*FEVHGC
Trigger: GCAACCATGCACCTCAAACAAGAAGTGACACCTCGG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGAAGGGCTGCACGGGCTaGCAGAAGATTGTTATCCAT +
Preference number: 5 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMKGCTG*QKIVIH
Trigger: ATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCTT...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAAGGGCTGCACGGGCTaGCAGAAGATTGTTATCCAT +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGKGCTG*QKIVIH
Trigger: ATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCTT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTCATGGAAACTTTCTGTaGACTCTGGTAAGGACAATC +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAHGNFL*TLVRTI
Trigger: GATTGTCCTTACCAGAGTCAACAGAAAGTTTCCATG...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAGTGGATTCTGCCTGTaGTTCAGGCTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTSGFCL*FRLVSW
Trigger: CCAGCTGACCAGCCTGAACAACAGGCAGAATCCACT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCAACAGCTTTTCCTCCTaGACCCCCTCCTTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSNSFSS*TPSFPN
Trigger: ATTGGGAAAGGAGGGGGTCAAGGAGGAAAAGCTGTT...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTAAACCAGATCTGTTATaGTTTCCTCTGAAGGACACT +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSKPDLL*FPLKDT
Trigger: AGTGTCCTTCAGAGGAAACAATAACAGATCTGGTTT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565611.5
CDS TCA 90 bp ACTCCAGTTTTGCTCTTCAAACTAATGTGCCGGGTTAGATCCCTCTaGAGTGAGGCAGGAAAGCCAAGCTTACTTAGTTCAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TPVLLFKLMCRVRSL*SEAGKPSLLSSGRR
Trigger: TCTCCTGCCTGAACTAAGTAAGCTTGGCTTTCCTGCCTCACTTCAGAGGGATCTAACCCGGCACATTAGTTTGAAGAGCAAAACTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS GCA 90 bp CTGTTCCTTCGTTCTCGTGTGAGGCTACAGGGAACCTGGTCTGGGTaGTCAGAAGGTTCATATGTTTCTTGTAATCCCTGTAGAATCTGT +
Preference number: 5 (lower is better)
Translates to: LFLRSRVRLQGTWSG*SEGSYVSCNPCRIC
Trigger: ACAGATTCTACAGGGATTACAAGAAACATATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 90 bp ATGGCATTTTATTTGGTGTATGCTCTTGTTCAGGTTTTTCTGCAGTaGGGCACTGTCTCACCACCTCGAAGGAAGCAGCGGAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: MAFYLVYALVQVFLQ*GTVSPPRRKQRNQK
Trigger: CTTCTGATTCCGCTGCTTCCTTCGAGGTGGTGAGACAGTGCCCCACTGCAGAAAAACCTGAACAAGAGCATACACCAAATAAAATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 90 bp GGGACGAGGAAATGGAAACACCTTCCCACTGGAATCCTTCTAGACTaGACAGATCAGGTTCCCCATCCAAATCTAAGGCTTCTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: GTRKWKHLPTGILLD*TDQVPHPNLRLLVH
Trigger: ATGAACAAGAAGCCTTAGATTTGGATGGGGAACCTGATCTGTCCAGTCTAGAAGGATTCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS-3UTR CAA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAATCAGAGTTTATTTCTaGGTTGCTATTGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRIRVYF*VAIGRF
Trigger: GAACCTTCCAATAGCAACCAAGAAATAAACTCTGAT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAACGTGTTTCATCAGTTaGGGGCTCCTGTATTCCTGT +
Preference number: 5 (lower is better)
Translates to: VIDPDAFSREMTIPKPTETCFIS*GLLYSC
Trigger: ACAGGAATACAGGAGCCCCAAACTGATGAAACACGT...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGATTTGTGTTTTCTGTGTaGGGGAATTACGTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRFVFSV*GNYVFH
Trigger: ATGAAACACGTAATTCCCCAACACAGAAAACACAAA...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TTTTCGATACATCGTCAGGCAGGGCAGAAGGGCACTACGCCGCAGAGCATTCGAATGATGGCATTTTATTaGGTGTATGCTCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: FSIHRQAGQKGTTPQSIRMMAFY*VYALVQ
Trigger: CTGAACAAGAGCATACACCAAATAAAATGCCATCAT...TCGAATGCTCTGCGGCGTAGTGCCCTTCTGCCCTGCCTGACGATGTATCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGGCCTTTGCCCAGCTCTaGCTTTTTCTTGGTTACTTG +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGAFAQL*LFLGYL
Trigger: CAAGTAACCAAGAAAAAGCAAGAGCTGGGCAAAGGC...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAGGTGTCACTTCTTGTTaGAGGTGCATGGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLGVTSC*RCMVAF
Trigger: GAAAGCAACCATGCACCTCAAACAAGAAGTGACACC...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGTGTCACTTCTTGTTaGAGGTGCATGGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGVTSC*RCMVAF
Trigger: GAAAGCAACCATGCACCTCAAACAAGAAGTGACACC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCGGGCTTGCAGAAGATaGTTATCCATGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSRACRR*LSMHCN
Trigger: ATTGCAGTGCATGGATAACAATCTTCTGCAAGCCCG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYGINGC*RSTVPS
Trigger: CGAAGGAACAGTAGATCTCAAACATCCATTGATGCC...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGACACTGCCATGGGTTaGGAAAGTAGGAGACGTGGT +
Preference number: 5 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVDTAMG*ESRRRG
Trigger: ACCACGTCTCCTACTTTCCAAACCCATGGCAGTGTC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACATTCACATTCTCATCTaGTTCAGGAGACATGGGCTC +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYIHILI*FRRHGL
Trigger: GAGCCCATGTCTCCTGAACAAGATGAGAATGTGAAT...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCATTGCAGGCAGAGCTaGGTGGCACAGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEHCRQS*VAQHSH
Trigger: ATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLENSLDT*QAELGG
Trigger: GCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTNSLDT*QAELGG
Trigger: GCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLASSNS*DTLQAE
Trigger: CTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGACCCACTATTGCCTTaGGTTGGCTCTTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEDPLLP*VGSSPS
Trigger: AGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGCTTCAGACCCACTATaGCCTTTGGTTGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEASDPL*PLVGSS
Trigger: GGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAGC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGAATCTCAAGTCGTTTGTaGTTCTTTATGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERISSRL*FFMLKV
Trigger: CACCTTCAACATAAAGAACAACAAACGACTTGAGAT...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GCCCCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTATCTCAAGTCGTTTGTaGTTCTTTATGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: APLRVCEFGCSQWPGRVSISSRL*FFMLKV
Trigger: CACCTTCAACATAAAGAACAACAAACGACTTGAGAT...AGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTACCTGCAGCATCCTGTTaGGATCCTTTCCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVPAASC*DPFLAV
Trigger: CACTGCTAGGAAAGGATCCAAACAGGATGCTGCAGG...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAGGAATATTCGATGGCTGCCATCGGTCTAGGCACGGCCATACAGTGGGAGAGACTTCATGAATCAATTTaGCTGTCATCTTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: EEYSMAAIGLGTAIQWERLHESI*LSSSAC
Trigger: ACATGCTGAAGATGACAGCAAAATTGATTCATGAAG...TCTCTCCCACTGTATGGCCGTGCCTAGACCGATGGCAGCCATCGAATATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGGCTCACAGACCCTCTaGAAGCCTATCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEGSQTL*KPIHKP
Trigger: GGGTTTATGGATAGGCTTCAAGAGGGTCTGTGAGCC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS TCA 90 bp CAGTGTGAATGTTGTGAGCATGGACTGACTGATCACTGGAGCCACTaGACACGAGATCATTCACCACCTTCATGCAAAGAATGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: QCECCEHGLTDHWSH*TRDHSPPSCKEWFC
Trigger: GCAAAACCATTCTTTGCATGAAGGTGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAACATTCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000569648.5
ENST00000570078.1
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGACCCGGAACGTCCTCTaGGTCCACCACCATTCCTCA +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVTRNVL*VHHHSS
Trigger: TGAGGAATGGTGGTGGACCAAGAGGACGTTCCGGGT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGTCTTCCACAGTGGGCTaGTTCGAGGGATTTGAGTGT +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLESSTVG*FEGFEC
Trigger: ACACTCAAATCCCTCGAACAAGCCCACTGTGGAAGA...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTAACCTGGGTAAGCCTTaGCCCAGCTCTTGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTNLGKP*PSSCFF
Trigger: GAAAAAGCAAGAGCTGGGCAAAGGCTTACCCAGGTT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGAAAGGCTTCGCTTTCTaGCCAAGCCAGGGGACGAGG +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTKGFAF*PSQGTR
Trigger: CCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGAAAGGCTTCGCTTTCTaGCCAAGCCAGGGGACGAGG +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVKGFAF*PSQGTR
Trigger: CCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSGINGC*RSTVPS
Trigger: CGAAGGAACAGTAGATCTCAAACATCCATTGATGCC...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACAGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTASSNS*DTLQAE
Trigger: CTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGC...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCCAGACTTATGCTAGGGGTATGCCTGGCTAGTAACCACTTTCTCCTTCCTTACCATGGAAACTTTCTGTaGACTCTGGTAAGGACAATC +
Preference number: 5 (lower is better)
Translates to: PRLMLGVCLASNHFLLPYHGNFL*TLVRTI
Trigger: GATTGTCCTTACCAGAGTCAACAGAAAGTTTCCATG...GTAAGGAAGGAGAAAGTGGTTACTAGCCAGGCATACCCCTAGCATAAGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCACTGAGGGTTTGTGAATTTGGCTGTTCTCAGTGGCCAGGCAGAGTCTCTGCTATCTCAAGTCGTTTGTaGTTCTTTATGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PLRVCEFGCSQWPGRVSAISSRL*FFMLKV
Trigger: CACCTTCAACATAAAGAACAACAAACGACTTGAGAT...AGCAGAGACTCTGCCTGGCCACTGAGAACAGCCAAATTCACAAACCCTCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGATGCAAAGAATGGTTTaGCTATGGCCCTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGMQRMV*LWPSRV
Trigger: AACTCTGGAGGGCCATAGCAAAACCATTCTTTGCAT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CAGAGAAAAGGGCCAGGTTTAGTCATCGATCCAGATGCATTTTCCCGGGAAATGATGCAAAGAATGGTTTaGCTATGGCCCTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: QRKGPGLVIDPDAFSREMMQRMV*LWPSRV
Trigger: AACTCTGGAGGGCCATAGCAAAACCATTCTTTGCAT...CATTTCCCGGGAAAATGCATCTGGATCGATGACTAAACCTGGCCCTTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAATGCAAAGAATGGTTTaGCTATGGCCCTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLMQRMV*LWPSRV
Trigger: AACTCTGGAGGGCCATAGCAAAACCATTCTTTGCAT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAA +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGKPTLG*QGQTLE
Trigger: TTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATACCATGTCCCAAAGCTaGGTATGTGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: HYMPCCPREVWFLNICLNTMSQS*VCGPGL
Trigger: GAGCCCAGGGCCACATACCAAGCTTTGGGACATGGT...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTGCAGTAGTATGATCTaGGCTCACTGCAACTTCTAC +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGCSSMI*AHCNFY
Trigger: GTAGAAGTTGCAGTGAGCCAAGATCATACTACTGCA...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATGCAGTAGTATGATCTaGGCTCACTGCAACTTCTAC +
Preference number: 5 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLCSSMI*AHCNFY
Trigger: GTAGAAGTTGCAGTGAGCCAAGATCATACTACTGCA...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS TCA 90 bp CTGGGTAAGCCTTTGCCCAGCTCTTGCTTTTTCTTGGTTACTTGCTaGATGACCTGTTCCCAGTTGACATTTCTCCGAGATGCATTTAGA +
Preference number: 5 (lower is better)
Translates to: LGKPLPSSCFFLVTC*MTCSQLTFLRDAFR
Trigger: TCTAAATGCATCTCGGAGAAATGTCAACTGGGAACAGGTCATTCAGCAAGTAACCAAGAAAAAGCAAGAGCTGGGCAAAGGCTTACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS TCA 90 bp TTCACATTCTCATCTTGTTCAGGAGACATGGGCTCTTGTTTAATCTaGACTGATGAGTCTGGAGCAGGGACACTGCCATGGGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: FTFSSCSGDMGSCLI*TDESGAGTLPWVWK
Trigger: TTTCCAAACCCATGGCAGTGTCCCTGCTCCAGACTCATCAGTTCAGATTAAACAAGAGCCCATGTCTCCTGAACAAGATGAGAATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 90 bp AAAGGTATTATATGGTCAGAGGATAATTGTGCACTATGTCGCCTTTaGGTAGCAACATTTTCAGCCCTTTCACCTGTTCGGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: KGIIWSEDNCALCRL*VATFSALSPVRREA
Trigger: TGCCTCCCTCCGAACAGGTGAAAGGGCTGAAAATGTTGCTACCCAAAGGCGACATAGTGCACAATTATCCTCTGACCATATAATACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS-3UTR CAA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCAGAGCAAGCAGAAGTaGCTCTGGAGCACACCCATG +
Preference number: 5 (lower is better)
Translates to: HYFINVAGMAFVILEAPVQSKQK*LWSTPM
Trigger: CATGGGTGTGCTCCAGAGCAACTTCTGCTTGCTCTG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR CAA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGTAACTCTCTCTGTCTaGGTAAGGAATTCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLVTLSV*VRNSVF
Trigger: GAAGACCGAATTCCTTACCAAGACAGAGAGAGTTAC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GCAGATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTAACTGATGTCACTTTTTaGAAGCTCTGCATCCAAGCT +
Preference number: 5 (lower is better)
Translates to: ADVKVDVRSTHCLTLSFLTDVTF*KLCIQA
Trigger: AGCTTGGATGCAGAGCTTCAAAAAAGTGACATCAGT...TAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATGCGGCGGGCACTATaGAGGTTTGGCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTMRRAL*RFGSGR
Trigger: CCTTCCTGAGCCAAACCTCAATAGTGCCCGCCGCAT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGGTGTCACTTCTTGTTaGAGGTGCATGGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEGVTSC*RCMVAF
Trigger: GAAAGCAACCATGCACCTCAAACAAGAAGTGACACC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATACCGAGGTGTCACTTCTaGTTTGAGGTGCATGGTTGC +
Preference number: 5 (lower is better)
Translates to: DILIGNRGERWEKLLNLIPRCHF*FEVHGC
Trigger: GCAACCATGCACCTCAAACAAGAAGTGACACCTCGG...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTATGCACTATGTCGCCTTaGGGTAGCAACATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVCTMSP*GSNIFS
Trigger: GCTGAAAATGTTGCTACCCAAAGGCGACATAGTGCA...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTGGGCTGAGGATGCGCTaGATGACAGACAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: HYFINVAGMAFVILEAPVGLRMR*MTDSFP
Trigger: AGGGAAACTGTCTGTCATCAAGCGCATCCTCAGCCC...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAACACGGGCTTGCAGAAGATaGTTATCCATGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: ERKIKVHLQFNSLTGSVTRACRR*LSMHCN
Trigger: ATTGCAGTGCATGGATAACAATCTTCTGCAAGCCCG...TGTTACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAAAGGGCTGCACGGGCTaGCAGAAGATTGTTATCCAT +
Preference number: 5 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKKGCTG*QKIVIH
Trigger: ATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCTT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLGINGC*RSTVPS
Trigger: CGAAGGAACAGTAGATCTCAAACATCCATTGATGCC...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGAGGAGACGTGGTTATTaGAAGAGAGGCTCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTRRRGY*KRGSGG
Trigger: CCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGATTCACATTCTCATCTaGTTCAGGAGACATGGGCTC +
Preference number: 5 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLIHILI*FRRHGL
Trigger: GAGCCCATGTCTCCTGAACAAGATGAGAATGTGAAT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAACATGGAAACTTTCTGTaGACTCTGGTAAGGACAATC +
Preference number: 5 (lower is better)
Translates to: VIDPDAFSREMTIPKPTEHGNFL*TLVRTI
Trigger: GATTGTCCTTACCAGAGTCAACAGAAAGTTTCCATG...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAAGAAAACTTCAGTTCTaGGCTAGGCTCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: VIDPDAFSREMTIPKPTERKLQF*ARLMET
Trigger: AGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTCT...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCCACTATTGCCTTTGGTaGGCTCTTCCCCTTCTTTAT +
Preference number: 5 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLHYCLW*ALPLLY
Trigger: ATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTG...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTAGTGGATTCTGCCTGTaGTTCAGGCTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HYFINVAGMAFVILEAPVSGFCL*FRLVSW
Trigger: CCAGCTGACCAGCCTGAACAACAGGCAGAATCCACT...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGAGTGGATTCTGCCTGTaGTTCAGGCTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVSGFCL*FRLVSW
Trigger: CCAGCTGACCAGCCTGAACAACAGGCAGAATCCACT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCTCAAATGCCTGACCTaGAGTGATCCACCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGLKCLT*SDPPAS
Trigger: CGAGGCGGGTGGATCACTCAAGGTCAGGCATTTGAG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
CDS-3UTR CAA 90 bp GTCATCGATCCAGATGCATTTTCCCGGGAAATGACCATTCCCAAACCCACAGAAACAGAAGTCAAGAGCTaGTGGGGCCATATATTATCT +
Preference number: 5 (lower is better)
Translates to: VIDPDAFSREMTIPKPTETEVKS*WGHILS
Trigger: AGATAATATATGGCCCCACAAGCTCTTGACTTCTGT...TTCTGTGGGTTTGGGAATGGTCATTTCCCGGGAAAATGCATCTGGATCGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGAACCCACAGAACAGTTaGGCTTCTCTGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLNPQNS*ASLDIL
Trigger: AAGGATATCCAGAGAAGCCAAACTGTTCTGTGGGTT...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GATGTAAAGGTAGACGTTAGGTCTACGCACTGCCTCACACTGAGCTTTCTATCCCTGTTAGAGTTTTGTTaGCATGGTGTGGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: DVKVDVRSTHCLTLSFLSLLEFC*HGVELL
Trigger: AAGCAGTTCCACACCATGCAAACAAAACTCTAACAG...GGATAGAAAGCTCAGTGTGAGGCAGTGCGTAGACCTAACGTCTACCTTTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TCTGGGAAATGTAGTCACCAGGTAACCCAGCAGGGCCATATACTTGGGCTTGGACCTTTCCCAATTTATTaGGGTCACTACCTTGAATTT +
Preference number: 5 (lower is better)
Translates to: SGKCSHQVTQQGHILGLGPFPIY*GHYLEF
Trigger: AAATTCAAGGTAGTGACCCAAATAAATTGGGAAAGG...TCCAAGCCCAAGTATATGGCCCTGCTGGGTTACCTGGTGACTACATTTCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS GCA 90 bp GAGCTAACTTCATCACACCCAGAACGAGACGTTTCTAGTGGGTTTTaGTCTGTAGAGTTCCAAATATCCTTTTTAGATGGGCTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: ELTSSHPERDVSSGF*SVEFQISFLDGLSG
Trigger: ACCAGACAGCCCATCTAAAAAGGATATTTGGAACTCTACAGAGCAAAACCCACTAGAAACGTCTCGTTCTGGGTGTGATGAAGTTAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS CCA 90 bp GGAGAAGATCCATCTCCAGTGGCTCTTCGTTTCTTTCTAATACTTTaGCCATCATTTTGTTCAGCACCAGAGGTACAGCTACTATCTGTG +
Preference number: 5 (lower is better)
Translates to: GEDPSPVALRFFLIL*PSFCSAPEVQLLSV
Trigger: CACAGATAGTAGCTGTACCTCTGGTGCTGAACAAAATGATGGCCAAAGTATTAGAAAGAAACGAAGAGCCACTGGAGATGGATCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGTAACTCTCTCTGTCTaGGTAAGGAATTCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTVTLSV*VRNSVF
Trigger: GAAGACCGAATTCCTTACCAAGACAGAGAGAGTTAC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCACTGATGTCACTTTTTaGAAGCTCTGCATCCAAGCT +
Preference number: 5 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLTDVTF*KLCIQA
Trigger: AGCTTGGATGCAGAGCTTCAAAAAAGTGACATCAGT...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCCGAGGTGTCACTTCTaGTTTGAGGTGCATGGTTGC +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTPRCHF*FEVHGC
Trigger: GCAACCATGCACCTCAAACAAGAAGTGACACCTCGG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGACTTTGGCCATCATTTaGTTCAGCACCAGAGGTACA +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLETLAII*FSTRGT
Trigger: TGTACCTCTGGTGCTGAACAAAATGATGGCCAAAGT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GCAAGTATGGCTTATATCACTCATATAAAAATGCCCCAGTCTCACTACTGGGATAAGGGCTGCACGGGCTaGCAGAAGATTGTTATCCAT +
Preference number: 5 (lower is better)
Translates to: ASMAYITHIKMPQSHYWDKGCTG*QKIVIH
Trigger: ATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCTT...ATCCCAGTAGTGAGACTGGGGCATTTTTATATGAGTGATATAAGCCATACTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVGINGC*RSTVPS
Trigger: CGAAGGAACAGTAGATCTCAAACATCCATTGATGCC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGACACTGCCATGGGTTaGGAAAGTAGGAGACGTGGT +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVDTAMG*ESRRRG
Trigger: ACCACGTCTCCTACTTTCCAAACCCATGGCAGTGTC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGACACTGCCATGGGTTaGGAAAGTAGGAGACGTGGT +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTDTAMG*ESRRRG
Trigger: ACCACGTCTCCTACTTTCCAAACCCATGGCAGTGTC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCATTGCAGGCAGAGCTaGGTGGCACAGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: HYFINVAGMAFVILEAPVHCRQS*VAQHSH
Trigger: ATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCATTGCAGGCAGAGCTaGGTGGCACAGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTHCRQS*VAQHSH
Trigger: ATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVNSLDT*QAELGG
Trigger: GCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVNSLDT*QAELGG
Trigger: GCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTCACTATTGCCTTTGGTaGGCTCTTCCCCTTCTTTAT +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTHYCLW*ALPLLY
Trigger: ATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTG...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGACCCACTATTGCCTTaGGTTGGCTCTTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTDPLLP*VGSSPS
Trigger: AGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATTGCATTTACGGCAGCTaGGTGTCCCTCAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: HYMPCCPREVWFLNICLNCIYGS*VSLKAS
Trigger: GGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGCA...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCCTGCAGCATCCTGTTaGGATCCTTTCCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTPAASC*DPFLAV
Trigger: CACTGCTAGGAAAGGATCCAAACAGGATGCTGCAGG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAA +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEKPTLG*QGQTLE
Trigger: TTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTT...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAGAGGAACCTGATGATTaGGGGGCAGGGATAAAACCA +
Preference number: 5 (lower is better)
Translates to: DILIGNRGERWEKLLNLIEEPDD*GAGIKP
Trigger: TGGTTTTATCCCTGCCCCCAAATCATCAGGTTCCTC...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGCTAATGTCCCTGCCCTaGAGGTTCTCAAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVLMSLP*RFSSSL
Trigger: CAGGGAACTTGAGAACCTCAAGGGCAGGGACATTAG...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564754.7
CDS CCA 90 bp CTTCTAGAGAGGTTTTCAAGTCTAGCAATAAGCCAGGGTGTGGACTaGCTGCAGATGTCATTTGTAATTCAGATTCTTTCTGGCGAACTA +
Preference number: 5 (lower is better)
Translates to: LLERFSSLAISQGVD*LQMSFVIQILSGEL
Trigger: TAGTTCGCCAGAAAGAATCTGAATTACAAATGACATCTGCAGCCAGTCCACACCCTGGCTTATTGCTAGACTTGAAAACCTCTCTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS-3UTR CAA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCATTTGGTGTATGCTCTaGTTCAGGTTTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLIWCML*FRFFCS
Trigger: ACTGCAGAAAAACCTGAACAAGAGCATACACCAAAT...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGTGGGGCTCATTTTCTTaGCCTGTACCTTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTWGSFS*PVPSSL
Trigger: CAGTGAGGAAGGTACAGGCAAAGAAAATGAGCCCCA...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTGGGGCTCATTTTCTTaGCCTGTACCTTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVWGSFS*PVPSSL
Trigger: CAGTGAGGAAGGTACAGGCAAAGAAAATGAGCCCCA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTGGCTGTTCAAGTCTTTaGCCAAATGCATCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTGCSSL*PNASKV
Trigger: TACCTTTGATGCATTTGGCAAAAGACTTGAACAGCC...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGGCTGTTCAAGTCTTTaGCCAAATGCATCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEGCSSL*PNASKV
Trigger: TACCTTTGATGCATTTGGCAAAAGACTTGAACAGCC...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAAACTTTGGCCATCATTTaGTTCAGCACCAGAGGTACA +
Preference number: 5 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKTLAII*FSTRGT
Trigger: TGTACCTCTGGTGCTGAACAAAATGATGGCCAAAGT...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAAGGGCTGCACGGGCTaGCAGAAGATTGTTATCCAT +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVKGCTG*QKIVIH
Trigger: ATGGATAACAATCTTCTGCAAGCCCGTGCAGCCCTT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCAGGAGACGTGGTTATTaGAAGAGAGGCTCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: FVLILINGTLWVLIQSQLRRRGY*KRGSGG
Trigger: CCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCT...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVASSNS*DTLQAE
Trigger: CTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CTGGAAAGCGACACTTCTACAGGTTTACTGATGAGTCCGGAGAAAATCCAAAAACACTATTGCCTTTGGTaGGCTCTTCCCCTTCTTTAT +
Preference number: 5 (lower is better)
Translates to: LESDTSTGLLMSPEKIQKHYCLW*ALPLLY
Trigger: ATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTG...TTTTTGGATTTTCTCCGGACTCATCAGTAAACCTGTAGAAGTGTCGCTTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGACCCACTATTGCCTTaGGTTGGCTCTTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTDPLLP*VGSSPS
Trigger: AGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTGCATTTACGGCAGCTaGGTGTCCCTCAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTCIYGS*VSLKAS
Trigger: GGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGCA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGATCTCAAGTCGTTTGTaGTTCTTTATGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGISSRL*FFMLKV
Trigger: CACCTTCAACATAAAGAACAACAAACGACTTGAGAT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCCTGCAGCATCCTGTTaGGATCCTTTCCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGPAASC*DPFLAV
Trigger: CACTGCTAGGAAAGGATCCAAACAGGATGCTGCAGG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGCTGTTAGAGTTTTGTTaGCATGGTGTGGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLELLEFC*HGVELL
Trigger: AAGCAGTTCCACACCATGCAAACAAAACTCTAACAG...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCTTTGCTGTTAGAGTTTaGTTTGCATGGTGTGGAACT +
Preference number: 5 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLFAVRV*FAWCGT
Trigger: AGTTCCACACCATGCAAACAAAACTCTAACAGCAAA...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AGGCTGGCAACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGATAAACTGCAGTTATTaGAGCAAACCAGAGCATATG +
Preference number: 5 (lower is better)
Translates to: RLATEQTKRVQTNIRLAGINCSY*SKPEHM
Trigger: CATATGCTCTGGTTTGCTCAAATAACTGCAGTTTAT...CCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGTTGCCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCGCCATATACTTGGGCTaGGAGGTGAGGTTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVAIYLG*EVRLEV
Trigger: AACCTCTAACCTCACCTCCAAGCCCAAGTATATGGC...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS CCA 90 bp TCCTGGCTGTTCAAGTCTTTTGCCAAATGCATCAAAGGTATTATATaGTCAGAGGATAATTGTGCACTATGTCGCCTTTGGGTAGCAACA +
Preference number: 5 (lower is better)
Translates to: SWLFKSFAKCIKGII*SEDNCALCRLWVAT
Trigger: TGTTGCTACCCAAAGGCGACATAGTGCACAATTATCCTCTGACCATATAATACCTTTGATGCATTTGGCAAAAGACTTGAACAGCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 90 bp GAAGGTTCATATGTTTCTTGTAATCCCTGTAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATCTCCATAGTTATCTGCTGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: EGSYVSCNPCRICIL*VLSALISIVICCLS
Trigger: GCTCAAGCAGCAGATAACTATGGAGATGAGTGCACTGAGGACCCATAGAATACAGATTCTACAGGGATTACAAGAAACATATGAACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 90 bp GTATTTCTTTGCTCCACAGAAAACTTCAGTTCTTGGCTAGGCTCATaGAAACTTTCTGTTGACTCTGGTAAGGACAATCTAGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: VFLCSTENFSSWLGS*KLSVDSGKDNLAVM
Trigger: CATCACTGCTAGATTGTCCTTACCAGAGTCAACAGAAAGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTCTGTGGAGCAAAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGGCAACTGTACCAAGTTaGTCATTTTCTTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVATVPS*SFSCRC
Trigger: GCAGCGGCAAGAAAATGACAAACTTGGTACAGTTGC...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAATTTGGTGTATGCTCTaGTTCAGGTTTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVIWCML*FRFFCS
Trigger: ACTGCAGAAAAACCTGAACAAGAGCATACACCAAAT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGATGACCTGTTCCCAGTaGACATTTCTCCGAGATGCA +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVMTCSQ*TFLRDA
Trigger: TGCATCTCGGAGAAATGTCAACTGGGAACAGGTCAT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGCCTTTGCCCAGCTCTaGCTTTTTCTTGGTTACTTG +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTAFAQL*LFLGYL
Trigger: CAAGTAACCAAGAAAAAGCAAGAGCTGGGCAAAGGC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTAACCTGGGTAAGCCTTaGCCCAGCTCTTGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGNLGKP*PSSCFF
Trigger: GAAAAAGCAAGAGCTGGGCAAAGGCTTACCCAGGTT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTGGGGCTCATTTTCTTaGCCTGTACCTTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTWGSFS*PVPSSL
Trigger: CAGTGAGGAAGGTACAGGCAAAGAAAATGAGCCCCA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTTGCACTATGTCGCCTTaGGGTAGCAACATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: HYFINVAGMAFVILEAPVCTMSP*GSNIFS
Trigger: GCTGAAAATGTTGCTACCCAAAGGCGACATAGTGCA...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTGCACTATGTCGCCTTaGGGTAGCAACATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVCTMSP*GSNIFS
Trigger: GCTGAAAATGTTGCTACCCAAAGGCGACATAGTGCA...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGCGGGCTTGCAGAAGATaGTTATCCATGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTRACRR*LSMHCN
Trigger: ATTGCAGTGCATGGATAACAATCTTCTGCAAGCCCG...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATCGGGCTTGCAGAAGATaGTTATCCATGCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDRACRR*LSMHCN
Trigger: ATTGCAGTGCATGGATAACAATCTTCTGCAAGCCCG...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp TGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAGACACTGCCATGGGTTaGGAAAGTAGGAGACGTGGT +
Preference number: 5 (lower is better)
Translates to: CTYPNKWNLVGANTKSTLDTAMG*ESRRRG
Trigger: ACCACGTCTCCTACTTTCCAAACCCATGGCAGTGTC...TAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCCATTGCAGGCAGAGCTaGGTGGCACAGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: FVLILINGTLWVLIQSQLHCRQS*VAQHSH
Trigger: ATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATG...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: FVLILINGTLWVLIQSQLNSLDT*QAELGG
Trigger: GCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATT...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp AAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGGTCCTGCTTCATGAATCAATTTaGCTGTCATCTTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: KAKNCLRNKSLGSLLEVLLHESI*LSSSAC
Trigger: ACATGCTGAAGATGACAGCAAAATTGATTCATGAAG...CAGGACCTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACAGTTCCACCAAAGCGAAGTCCAAATCAGAGTTCTTACCGATTCTACCACTCGACATGAGTCAGTTTTaGTCAGGTCATTTAATGGTT +
Preference number: 5 (lower is better)
Translates to: HSSTKAKSKSEFLPILPLDMSQF*SGHLMV
Trigger: AACCATTAAATGACCTGACAAAAACTGACTCATGTC...GAGTGGTAGAATCGGTAAGAACTCTGATTTGGACTTCGCTTTGGTGGAACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTGAGGAACCTGATGATTaGGGGGCAGGGATAAAACCA +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTEEPDD*GAGIKP
Trigger: TGGTTTTATCCCTGCCCCCAAATCATCAGGTTCCTC...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTCGTCCATCTCCTTTTTaGAGCTGTACACGATGTGGC +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTRPSPF*SCTRCG
Trigger: GCCACATCGTGTACAGCTCAAAAAAGGAGATGGACG...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564754.7
ENST00000565380.5
CDS TCA 90 bp ACAGTTTTATCTGCTGAACAGGTATATAGCAAGTTCCCAAATATCTaGATTGCATTTACGGCAGCTTGGTGTCCCTCAAAGCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TVLSAEQVYSKFPNI*IAFTAAWCPSKLPS
Trigger: AGAAGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGCAATTCAGATATTTGGGAACTTGCTATATACCTGTTCAGCAGATAAAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS TCA 90 bp AAAGGTTTGCAATCTCCTTGCTCTTTCCAAGGTGGTGCTTCTAAATaGTGCATGAGACAACACGGGAAATGCCATTTAAAACCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KGLQSPCSFQGGASK*CMRQHGKCHLKPFF
Trigger: AAAGAAGGGTTTTAAATGGCATTTCCCGTGTTGTCTCATGCATCATTTAGAAGCACCACCTTGGAAAGAGCAAGGAGATTGCAAACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565660.5
CDS-3UTR CAA 90 bp ACTGAACAAACCAAAAGGGTTCAAACCAACATTAGGCTTGCAGGGTCAGACACTATCAGAGTTTATTTCTaGGTTGCTATTGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: TEQTKRVQTNIRLAGSDTIRVYF*VAIGRF
Trigger: GAACCTTCCAATAGCAACCAAGAAATAAACTCTGAT...AGTGTCTGACCCTGCAAGCCTAATGTTGGTTTGAACCCTTTTGGTTTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTACGTGTTTCATCAGTTaGGGGCTCCTGTATTCCTGT +
Preference number: 5 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGTCFIS*GLLYSC
Trigger: ACAGGAATACAGGAGCCCCAAACTGATGAAACACGT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GAAGTGAAGGCAAAGAACTGTCTCAGAAACAAGTCTCTAGGAAGTCTGCTTGAGTTTGTGTTTTCTGTGTaGGGGAATTACGTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: EVKAKNCLRNKSLGSLLEFVFSV*GNYVFH
Trigger: ATGAAACACGTAATTCCCCAACACAGAAAACACAAA...CTCAAGCAGACTTCCTAGAGACTTGTTTCTGAGACAGTTCTTTGCCTTCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAATGATGGCATTTTATTaGGTGTATGCTCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVMMAFY*VYALVQ
Trigger: CTGAACAAGAGCATACACCAAATAAAATGCCATCAT...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCACTGTAGCACCTCTTaGGCCTTTCGTAAAGTATCA +
Preference number: 5 (lower is better)
Translates to: HYMPCCPREVWFLNICLNHCSTS*AFRKVS
Trigger: TGATACTTTACGAAAGGCCAAAGAGGTGCTACAGTG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTTGCACTATGTCGCCTTaGGGTAGCAACATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGCTMSP*GSNIFS
Trigger: GCTGAAAATGTTGCTACCCAAAGGCGACATAGTGCA...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCACTTTGGCCATCATTTaGTTCAGCACCAGAGGTACA +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVTLAII*FSTRGT
Trigger: TGTACCTCTGGTGCTGAACAAAATGATGGCCAAAGT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: HYMPCCPREVWFLNICLNGINGC*RSTVPS
Trigger: CGAAGGAACAGTAGATCTCAAACATCCATTGATGCC...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAACCCTAGATGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: PNKWNLVGANTKSTLTLDGINGC*RSTVPS
Trigger: CGAAGGAACAGTAGATCTCAAACATCCATTGATGCC...ATCTAGGGTTAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCATTCACATTCTCATCTaGTTCAGGAGACATGGGCTC +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVIHILI*FRRHGL
Trigger: GAGCCCATGTCTCCTGAACAAGATGAGAATGTGAAT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TTTGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: FVLILINGTLWVLIQSQLASSNS*DTLQAE
Trigger: CTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGC...GAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS-3UTR CAA 90 bp GATATCCTTATAGGAAATAGGGGTGAGAGGTGGGAAAAGCTTCTCAATCTCATAAGAAAACTTCAGTTCTaGGCTAGGCTCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: DILIGNRGERWEKLLNLIRKLQF*ARLMET
Trigger: AGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTCT...TATGAGATTGAGAAGCTTTTCCCACCTCTCACCCCTATTTCCTATAAGGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAA +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVKPTLG*QGQTLE
Trigger: TTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGAAACCAACATTAGGCTaGCAGGGTCAGACACTAGAA +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTKPTLG*QGQTLE
Trigger: TTCTAGTGTCTGACCCTGCAAGCCTAATGTTGGTTT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CTAGAAAGGAAGATAAAGGTACACCTCCAGTTCAACAGCCTGACAGGATCTGTAGACATGAGTCAGTTTTaGTCAGGTCATTTAATGGTT +
Preference number: 5 (lower is better)
Translates to: LERKIKVHLQFNSLTGSVDMSQF*SGHLMV
Trigger: AACCATTAAATGACCTGACAAAAACTGACTCATGTC...TACAGATCCTGTCAGGCTGTTGAACTGGAGGTGTACCTTTATCTTCCTTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS TCA 90 bp TTCTCTTCTCCTGATTCTGAAGAATCAATGGCTACTACTTCTAACTaGGGATTAGGAATTTCTAGGACTTCCAGAGACGAGTCACTATCT +
Preference number: 5 (lower is better)
Translates to: FSSPDSEESMATTSN*GLGISRTSRDESLS
Trigger: AGATAGTGACTCGTCTCTGGAAGTCCTAGAAATTCCTAATCCTCAGTTAGAAGTAGTAGCCATTGATTCTTCAGAATCAGGAGAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS GCA 90 bp AACAATTCTGTAGTTGCAGAACCTAGGGTTCCAATTTTTGTTCCATaGTTTTCCGTGTCAGATGTCTCTCCATCACTTTCATCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: NNSVVAEPRVPIFVP*FSVSDVSPSLSSSS
Trigger: ACTAGAAGATGAAAGTGATGGAGAGACATCTGACACGGAAAAGCATGGAACAAAAATTGGAACCCTAGGTTCTGCAACTACAGAATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS-3UTR CAA 90 bp CATTATTTTATAAATGTGGCAGGTATGGCCTTCGTAATTCTAGAAGCTCCCGTTCTAGGGTTCCAATTTTaGTTCCATGCTTTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: HYFINVAGMAFVILEAPVLGFQF*FHAFPC
Trigger: ACACGGAAAAGCATGGAACAAAAATTGGAACCCTAG...AACGGGAGCTTCTAGAATTACGAAGGCCATACCTGCCACATTTATAAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGGGCTGTTCAAGTCTTTaGCCAAATGCATCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTGCSSL*PNASKV
Trigger: TACCTTTGATGCATTTGGCAAAAGACTTGAACAGCC...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTACTTTGGCCATCATTTaGTTCAGCACCAGAGGTACA +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTTLAII*FSTRGT
Trigger: TGTACCTCTGGTGCTGAACAAAATGATGGCCAAAGT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp CACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCTAAATCATGGAAACTTTCTGTaGACTCTGGTAAGGACAATC +
Preference number: 5 (lower is better)
Translates to: HYMPCCPREVWFLNICLNHGNFL*TLVRTI
Trigger: GATTGTCCTTACCAGAGTCAACAGAAAGTTTCCATG...ATTTAGACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCAGAAAACTTCAGTTCTaGGCTAGGCTCATGGAAACT +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVRKLQF*ARLMET
Trigger: AGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTCT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTATGCAAAGAATGGTTTaGCTATGGCCCTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGMQRMV*LWPSRV
Trigger: AACTCTGGAGGGCCATAGCAAAACCATTCTTTGCAT...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS GCA 90 bp CATGGCACACTCACCAGATCTGTTATTGTTTCCTCTGAAGGACACTaGACACTTTGGCACAGTGAAAAATTAGTGCTAATTAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: HGTLTRSVIVSSEGH*TLWHSEKLVLINFN
Trigger: ATTGAAATTAATTAGCACTAATTTTTCACTGTGCCAAAGTGTGCAGTGTCCTTCAGAGGAAACAATAACAGATCTGGTGAGTGTGCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263805.8
CDS-3UTR CAA 90 bp CACATTTACAGAGATTTACTAGAAGTGGTGTCTGTAAGGACTTGTCACTATGTGATTGGAAGGTTCATCTaGTCGACTTTGTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: HIYRDLLEVVSVRTCHYVIGRFI*STLFFP
Trigger: AGGAAAGAACAAAGTCGACAAGATGAACCTTCCAAT...CACATAGTGACAAGTCCTTACAGACACCACTTCTAGTAAATCTCTGTAAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp GTCAAACTGGGTAACCAATTAGGATCTGTATCTTCAATAAACATCTGGAGAACGATTGGAAGGTTCATCTaGTCGACTTTGTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VKLGNQLGSVSSINIWRTIGRFI*STLFFP
Trigger: AGGAAAGAACAAAGTCGACAAGATGAACCTTCCAAT...CGTTCTCCAGATGTTTATTGAAGATACAGATCCTAATTGGTTACCCAGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCATTTCTTGGTTGCTATaGGAAGGTTCATCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVISWLL*EGSSCR
Trigger: TCGACAAGATGAACCTTCCAATAGCAACCAAGAAAT...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp TGTACTTATCCTAATAAATGGAACCTTGTGGGTGCTAATACAAAGTCAACTCTAATTCACATTCTCATCTaGTTCAGGAGACATGGGCTC +
Preference number: 5 (lower is better)
Translates to: CTYPNKWNLVGANTKSTLIHILI*FRRHGL
Trigger: GAGCCCATGTCTCCTGAACAAGATGAGAATGTGAAT...TAGAGTTGACTTTGTATTAGCACCCACAAGGTTCCATTTATTAGGATAAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS TCA 90 bp CTGGTACTTTTAGAAGTGCTAAGAAGTGGATTTTGCAATGACTCATaGCACTGTAGCACCTCTTTGGCCTTTCGTAAAGTATCATTTAAA +
Preference number: 5 (lower is better)
Translates to: LVLLEVLRSGFCNDS*HCSTSLAFRKVSFK
Trigger: TTTAAATGATACTTTACGAAAGGCCAAAGAGGTGCTACAGTGTCATGAGTCATTGCAAAATCCACTTCTTAGCACTTCTAAAAGTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS-3UTR CAA 90 bp TATATCACTATATGCCATGCTGTCCCAGAGAAGTATGGTTCCTTAACATTTGTCCTTCATGAATCAATTTaGCTGTCATCTTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: YITICHAVPEKYGSLTFVLHESI*LSSSAC
Trigger: ACATGCTGAAGATGACAGCAAAATTGATTCATGAAG...GACAAATGTTAAGGAACCATACTTCTCTGGGACAGCATGGCATATAGTGATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTTTTGCTGTTAGAGTTTaGTTTGCATGGTGTGGAACT +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTFAVRV*FAWCGT
Trigger: AGTTCCACACCATGCAAACAAAACTCTAACAGCAAA...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATCTCAAGTCGTTTGTaGTTCTTTATGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTISSRL*FFMLKV
Trigger: CACCTTCAACATAAAGAACAACAAACGACTTGAGAT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp ATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAGGTCTTCATGAATCAATTTaGCTGTCATCTTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: ILKVWHLNKLVLKSLTIGLHESI*LSSSAC
Trigger: ACATGCTGAAGATGACAGCAAAATTGATTCATGAAG...ACCTATAGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS-3UTR CAA 90 bp AAACTGATCCTCAAAGTCTGGCACTTAAACAAACTTGTACTTAAAAGCCTGACTATAAACTGCAGTTATTaGAGCAAACCAGAGCATATG +
Preference number: 5 (lower is better)
Translates to: KLILKVWHLNKLVLKSLTINCSY*SKPEHM
Trigger: CATATGCTCTGGTTTGCTCAAATAACTGCAGTTTAT...AGTCAGGCTTTTAAGTACAAGTTTGTTTAAGTGCCAGACTTTGAGGATCAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263805.8
ENST00000564754.7
CDS GCA 90 bp TTTCTATGCCAAACCAGATCTGTTATTGTTTCCTCTGAAGGACACTaGACACTTTGGCACAGTGAAAAATTAGTGCTAATTAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: FLCQTRSVIVSSEGH*TLWHSEKLVLINFN
Trigger: ATTGAAATTAATTAGCACTAATTTTTCACTGTGCCAAAGTGTGCAGTGTCCTTCAGAGGAAACAATAACAGATCTGGTTTGGCATAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565611.5
CDS GCA 72 bp AGAGCAAGCAGAAGTTGCTCTGGAGCACACCCATGGTaGCAGCTGCACTCAGAAGGCCTGGTGACAGCGCTT +
Preference number: 6 (lower is better)
Translates to: RASRSCSGAHPW*QLHSEGLVTAL
Trigger: AAGCGCTGTCACCAGGCCTTCTGAGTGCAGCTGGCACCATGGGTGTGCTCCAGAGCAACTTCTGCTTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565948.1
CDS TCA 72 bp GGACTTCCAGAGACGAGTCACTATCTGGCTCATCTCTaGCACTCTCCTGCTCCCGACCAGTCCTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: GLPETSHYLAHL*HSPAPDQSCCL
Trigger: AAGACAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTCTCTGGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS CCA 72 bp GGCTTCGCTTTCTTGCCAAGCCAGGGGACGAGGAAATaGAAACACCTTCCCACTGGAATCCTTCTAGACTGG +
Preference number: 6 (lower is better)
Translates to: GFAFLPSQGTRK*KHLPTGILLDW
Trigger: CCAGTCTAGAAGGATTCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CAA 72 bp CAGGAGAGGGCCCGAGGGCTGACTGATGTCACTTTTTaGAAGCTCTGCATCCAAGCTAGCACTCTCAAAGCC +
Preference number: 6 (lower is better)
Translates to: QERARGLTDVTF*KLCIQASTLKA
Trigger: GGCTTTGAGAGTGCTAGCTTGGATGCAGAGCTTCAAAAAAGTGACATCAGTCAGCCCTCGGGCCCTCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS TCA 72 bp AGGAGACGTGGTTATTTGAAGAGAGGCTCCGGTGGGTaGTGGAGACACATGGGAAGATGGAGGCTCCAGAAA +
Preference number: 6 (lower is better)
Translates to: RRRGYLKRGSGG*WRHMGRWRLQK
Trigger: TTTCTGGAGCCTCCATCTTCCCATGTGTCTCCATCACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS GCA 72 bp CATGATCACGCTGCTCTCAGAAAGGCTTCGCTTTCTTaGCAAGCCAGGGGACGAGGAAATGGAAACACCTTC +
Preference number: 6 (lower is better)
Translates to: HDHAALRKASLS*QARGRGNGNTF
Trigger: GAAGGTGTTTCCATTTCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTTCTGAGAGCAGCGTGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 72 bp AGGTACAGCTACTATCTGTGGCTGCATCCGCTAAACTaGAGATCGCAAGGGCTGAGGATGCGCTTGATGACA +
Preference number: 6 (lower is better)
Translates to: RYSYYLWLHPLN*RSQGLRMRLMT
Trigger: TGTCATCAAGCGCATCCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS CAA 72 bp CCGCTAAACTGGAGATCGCAAGGGCTGAGGATGCGCTaGATGACAGACAGTTTCCCTCTCCATTACTCTCCT +
Preference number: 6 (lower is better)
Translates to: PLNWRSQGLRMR*MTDSFPLHYSP
Trigger: AGGAGAGTAATGGAGAGGGAAACTGTCTGTCATCAAGCGCATCCTCAGCCCTTGCGATCTCCAGTTTAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS CAA 90 bp TGGCTGCATCCGCTAAACTGGAGATCGCAAGGGCTGAGGATGCGCTaGATGACAGACAGTTTCCCTCTCCATTACTCTCCTGGGAATTCT +
Preference number: 6 (lower is better)
Translates to: WLHPLNWRSQGLRMR*MTDSFPLHYSPGNS
Trigger: AGAATTCCCAGGAGAGTAATGGAGAGGGAAACTGTCTGTCATCAAGCGCATCCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS CAA 90 bp AAGTGGGAAAAAGGGAGTGGGCAGCAGTGCGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCGTTCTCGTGTGAGGCTACAGGGAAC +
Preference number: 6 (lower is better)
Translates to: KWEKGSGQQCGINGC*RSTVPSFSCEATGN
Trigger: GTTCCCTGTAGCCTCACACGAGAACGAAGGAACAGTAGATCTCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS TCA 72 bp TCCGAGATGCATTTAGAATCTGCCGTAGGGTTGGCTTaGGCCCAGACTCCTTCTCTGTCTCACTCTTTCGGT +
Preference number: 6 (lower is better)
Translates to: SEMHLESAVGLA*AQTPSLSHSFG
Trigger: ACCGAAAGAGTGAGACAGAGAAGGAGTCTGGGCTCAAGCCAACCCTACGGCAGATTCTAAATGCATCTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS TCA 72 bp TGGATGTTTGAGATCTACTGTTCCTTCGTTCTCGTGTaGGGCTACAGGGAACCTGGTCTGGGTGCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: WMFEIYCSFVLV*GYREPGLGAQK
Trigger: CTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGAACAGTAGATCTCAAACATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS TCA 72 bp AAGGGAGTGGGCAGCAGTGCGGCATCAATGGATGTTTaGGATCTACTGTTCCTTCGTTCTCGTGTGAGGCTA +
Preference number: 6 (lower is better)
Translates to: KGVGSSAASMDV*DLLFLRSRVRL
Trigger: TAGCCTCACACGAGAACGAAGGAACAGTAGATCTCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 72 bp CATTTTGTTCAGCACCAGAGGTACAGCTACTATCTGTaGCTGCATCCGCTAAACTGGAGATCGCAAGGGCTG +
Preference number: 6 (lower is better)
Translates to: HFVQHQRYSYYL*LHPLNWRSQGL
Trigger: CAGCCCTTGCGATCTCCAGTTTAGCGGATGCAGCCACAGATAGTAGCTGTACCTCTGGTGCTGAACAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 72 bp GTGGGAAAAAGGGAGTGGGCAGCAGTGCGGCATCAATaGATGTTTGAGATCTACTGTTCCTTCGTTCTCGTG +
Preference number: 6 (lower is better)
Translates to: VGKREWAAVRHQ*MFEIYCSFVLV
Trigger: CACGAGAACGAAGGAACAGTAGATCTCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CAA 72 bp AAAGGGAGTGGGCAGCAGTGCGGCATCAATGGATGTTaGAGATCTACTGTTCCTTCGTTCTCGTGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: KGSGQQCGINGC*RSTVPSFSCEA
Trigger: AGCCTCACACGAGAACGAAGGAACAGTAGATCTCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS GCA 72 bp CGTTCTCGTGTGAGGCTACAGGGAACCTGGTCTGGGTaGTCAGAAGGTTCATATGTTTCTTGTAATCCCTGT +
Preference number: 6 (lower is better)
Translates to: RSRVRLQGTWSG*SEGSYVSCNPC
Trigger: ACAGGGATTACAAGAAACATATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCTCACACGAGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 72 bp CTGTTCCTTCGTTCTCGTGTGAGGCTACAGGGAACCTaGTCTGGGTGCTCAGAAGGTTCATATGTTTCTTGT +
Preference number: 6 (lower is better)
Translates to: LFLRSRVRLQGT*SGCSEGSYVSC
Trigger: ACAAGAAACATATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 72 bp TCATTCACCACCTTCATGCAAAGAATGGTTTTGCTATaGCCCTCCAGAGTTCTGAGGAGCAGTCCATTCCGG +
Preference number: 6 (lower is better)
Translates to: SFTTFMQRMVLL*PSRVLRSSPFR
Trigger: CCGGAATGGACTGCTCCTCAGAACTCTGGAGGGCCATAGCAAAACCATTCTTTGCATGAAGGTGGTGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000569648.5
ENST00000570078.1
CDS TCA 72 bp TCATCTTGTTCAGGAGACATGGGCTCTTGTTTAATCTaGACTGATGAGTCTGGAGCAGGGACACTGCCATGG +
Preference number: 6 (lower is better)
Translates to: SSCSGDMGSCLI*TDESGAGTLPW
Trigger: CCATGGCAGTGTCCCTGCTCCAGACTCATCAGTTCAGATTAAACAAGAGCCCATGTCTCCTGAACAAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS GCA 72 bp GTTGTTCTTTATGTTGAAGGTGACCACAGTGCCATTTaGCAGTCCCGCATAGAGGATTCGCCATCTACTGTG +
Preference number: 6 (lower is better)
Translates to: VVLYVEGDHSAI*QSRIEDSPSTV
Trigger: CACAGTAGATGGCGAATCCTCTATGCGGGACTGGCAAATGGCACTGTGGTCACCTTCAACATAAAGAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000569648.5
CDS CCA 72 bp GTTTGGATATGTAAGGACCATGGTTATCTTCCACAGTaGGCTTGTTCGAGGGATTTGAGTGTTCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: VWICKDHGYLPQ*ACSRDLSVLQG
Trigger: CCCCTGGAGAACACTCAAATCCCTCGAACAAGCCCACTGTGGAAGATAACCATGGTCCTTACATATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 72 bp GCTAATATTGCGAATGCGGCGGGCACTATTGAGGTTTaGCTCAGGAAGGTGTACTCCAGTTTTGCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: ANIANAAGTIEV*LRKVYSSFALQ
Trigger: TTGAAGAGCAAAACTGGAGTACACCTTCCTGAGCCAAACCTCAATAGTGCCCGCCGCATTCGCAATATTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 72 bp AAAGCATCGCAGTTCTTCCAGCGACATTTCAGAGTCTaGAAGTTGGGATTAGTGTGGTCGGTCAGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: KASQFFQRHFRV*KLGLVWSVSKC
Trigger: ACACTTGCTGACCGACCACACTAATCCCAACTTCCAGACTCTGAAATGTCGCTGGAAGAACTGCGATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS CAA 72 bp CTGTCACTGATCTCTCTATTAGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAGCTTGGTGGCACAGCA +
Preference number: 6 (lower is better)
Translates to: LSLISLLASSNS*DTLQAELGGTA
Trigger: TGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAGAGAGATCAGTGACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS CAA 90 bp ATCTCCAGTGGCTCTTCGTTTCTTTCTAATACTTTGGCCATCATTTaGTTCAGCACCAGAGGTACAGCTACTATCTGTGGCTGCATCCGC +
Preference number: 6 (lower is better)
Translates to: ISSGSSFLSNTLAII*FSTRGTATICGCIR
Trigger: GCGGATGCAGCCACAGATAGTAGCTGTACCTCTGGTGCTGAACAAAATGATGGCCAAAGTATTAGAAAGAAACGAAGAGCCACTGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS TCA 72 bp TGTTGTGAGCATGGACTGACTGATCACTGGAGCCACTaGACACGAGATCATTCACCACCTTCATGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: CCEHGLTDHWSH*TRDHSPPSCKE
Trigger: TTCTTTGCATGAAGGTGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000569648.5
ENST00000570078.1
CDS TCA 72 bp TGTTGTGAGCATGGACTGACTGATCACTGGAGCCACTaGACACGAGATCATTCACCACCTTTCCAGAATGAT +
Preference number: 6 (lower is better)
Translates to: CCEHGLTDHWSH*TRDHSPPFQND
Trigger: ATCATTCTGGAAAGGTGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565660.5
CDS CAA 72 bp CTATTGAGGTTTGGCTCAGGAAGGTGTACTCCAGTTTaGCTCTTCAAACTAATGTGCCGGGTTAGATCCCTC +
Preference number: 6 (lower is better)
Translates to: LLRFGSGRCTPV*LFKLMCRVRSL
Trigger: GAGGGATCTAACCCGGCACATTAGTTTGAAGAGCAAAACTGGAGTACACCTTCCTGAGCCAAACCTCAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CAA 72 bp GGCAGAGCTTGGTGGCACAGCATTCACATTCTCATCTaGTTCAGGAGACATGGGCTCTTGTTTAATCTGAAC +
Preference number: 6 (lower is better)
Translates to: GRAWWHSIHILI*FRRHGLLFNLN
Trigger: GTTCAGATTAAACAAGAGCCCATGTCTCCTGAACAAGATGAGAATGTGAATGCTGTGCCACCAAGCTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CAA 72 bp GGGGTTTTATTAGCTTCCAGTAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGCACAGCATTCACATTC +
Preference number: 6 (lower is better)
Translates to: GVLLASSNSLDT*QAELGGTAFTF
Trigger: GAATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAAAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565500.5
CDS CAA 72 bp TTCTCCAAAGGGGTTTTATTAGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAGCTTGGTGGCACAGCA +
Preference number: 6 (lower is better)
Translates to: FSKGVLLASSNS*DTLQAELGGTA
Trigger: TGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAAAACCCCTTTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565500.5
CDS CAA 90 bp CTCAATGAGTTACTAGGTGAAACCATCTGCTGGGGCTCATTTTCTTaGCCTGTACCTTCCTCACTGAAGAAGCTATACACAGAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LNELLGETICWGSFS*PVPSSLKKLYTEGA
Trigger: AGCTCCTTCTGTGTATAGCTTCTTCAGTGAGGAAGGTACAGGCAAAGAAAATGAGCCCCAGCAGATGGTTTCACCTAGTAACTCATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS TCA 72 bp TTGCTCTTCAAACTAATGTGCCGGGTTAGATCCCTCTaGAGTGAGGCAGGAAAGCCAAGCTTACTTAGTTCA +
Preference number: 6 (lower is better)
Translates to: LLFKLMCRVRSL*SEAGKPSLLSS
Trigger: TGAACTAAGTAAGCTTGGCTTTCCTGCCTCACTTCAGAGGGATCTAACCCGGCACATTAGTTTGAAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS TCA 72 bp CCTTTGCCCAGCTCTTGCTTTTTCTTGGTTACTTGCTaGATGACCTGTTCCCAGTTGACATTTCTCCGAGAT +
Preference number: 6 (lower is better)
Translates to: PLPSSCFFLVTC*MTCSQLTFLRD
Trigger: ATCTCGGAGAAATGTCAACTGGGAACAGGTCATTCAGCAAGTAACCAAGAAAAAGCAAGAGCTGGGCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 72 bp AAATGGAAACACCTTCCCACTGGAATCCTTCTAGACTaGACAGATCAGGTTCCCCATCCAAATCTAAGGCTT +
Preference number: 6 (lower is better)
Translates to: KWKHLPTGILLD*TDQVPHPNLRL
Trigger: AAGCCTTAGATTTGGATGGGGAACCTGATCTGTCCAGTCTAGAAGGATTCCAGTGGGAAGGTGTTTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 72 bp ATATGGTCAGAGGATAATTGTGCACTATGTCGCCTTTaGGTAGCAACATTTTCAGCCCTTTCACCTGTTCGG +
Preference number: 6 (lower is better)
Translates to: IWSEDNCALCRL*VATFSALSPVR
Trigger: CCGAACAGGTGAAAGGGCTGAAAATGTTGCTACCCAAAGGCGACATAGTGCACAATTATCCTCTGACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 72 bp ACTGGTACAGGCTTCAGACCCACTATTGCCTTTGGTTaGCTCTTCCCCTTCTTTATTTATGCTAGAAAGACC +
Preference number: 6 (lower is better)
Translates to: TGTGFRPTIAFG*LFPFFIYARKT
Trigger: GGTCTTTCTAGCATAAATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAGCCTGTACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS CCA 72 bp AAAACATCCTGTTCAGTGTCACTATTCTCAGGAACATaGGCAGCCCGTAGACTTTTCTTCTTCCGGAGTTTC +
Preference number: 6 (lower is better)
Translates to: KTSCSVSLFSGT*AARRLFFFRSF
Trigger: GAAACTCCGGAAGAAGAAAAGTCTACGGGCTGCCCATGTTCCTGAGAATAGTGACACTGAACAGGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS CAA 72 bp CAAGTTCCCAAATATCTGAATTGCATTTACGGCAGCTaGGTGTCCCTCAAAGCTTCCTTCTGTGGGTTCATC +
Preference number: 6 (lower is better)
Translates to: QVPKYLNCIYGS*VSLKASFCGFI
Trigger: GATGAACCCACAGAAGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGCAATTCAGATATTTGGGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS CAA 90 bp TTCTCCAAAGGGGTTTTATTAGCTTCCAGTAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGCACAGCATTCACATTCTCATCTTGT +
Preference number: 6 (lower is better)
Translates to: FSKGVLLASSNSLDT*QAELGGTAFTFSSC
Trigger: ACAAGATGAGAATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAAAACCCCTTTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565500.5
CDS GCA 72 bp CGGTGGTATAGACCTCTCCTGGCTGTTCAAGTCTTTTaGCAAATGCATCAAAGGTATTATATGGTCAGAGGA +
Preference number: 6 (lower is better)
Translates to: RWYRPLLAVQVF*QMHQRYYMVRG
Trigger: TCCTCTGACCATATAATACCTTTGATGCATTTGGCAAAAGACTTGAACAGCCAGGAGAGGTCTATACCACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS GCA 72 bp GCTGCACGGGCTTGCAGAAGATTGTTATCCATGCACTaGAATGACTTACTAAGTTCTTCCTCCCTTAAAGAA +
Preference number: 6 (lower is better)
Translates to: AARACRRLLSMH*NDLLSSSSLKE
Trigger: TTCTTTAAGGGAGGAAGAACTTAGTAAGTCATTGCAGTGCATGGATAACAATCTTCTGCAAGCCCGTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CAA 72 bp TACATACTATTAGCTTCCAGTAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGCACAGCATTCACATTC +
Preference number: 6 (lower is better)
Translates to: YILLASSNSLDT*QAELGGTAFTF
Trigger: GAATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAGTATGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS CAA 72 bp AGAAAAGCTTACATACTATTAGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAGCTTGGTGGCACAGCA +
Preference number: 6 (lower is better)
Translates to: RKAYILLASSNS*DTLQAELGGTA
Trigger: TGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAGTATGTAAGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS CAA 90 bp AGGAGAAGATCCATCTCCAGTGGCTCTTCGTTTCTTTCTAATACTTaGGCCATCATTTTGTTCAGCACCAGAGGTACAGCTACTATCTGT +
Preference number: 6 (lower is better)
Translates to: RRRSISSGSSFLSNT*AIILFSTRGTATIC
Trigger: ACAGATAGTAGCTGTACCTCTGGTGCTGAACAAAATGATGGCCAAAGTATTAGAAAGAAACGAAGAGCCACTGGAGATGGATCTTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000565948.1
CDS CAA 90 bp TTAACCCAGAGAAAAGCTTACATACTATTAGCTTCCAGTAATTCCTaGGACACATTGCAGGCAGAGCTTGGTGGCACAGCATTCACATTC +
Preference number: 6 (lower is better)
Translates to: LTQRKAYILLASSNS*DTLQAELGGTAFTF
Trigger: GAATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAGTATGTAAGCTTTTCTCTGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS TCA 72 bp GGATTAGTGTGGTCGGTCAGCAAGTGTTGTTTTAAATaGTCTACAACGCCAAATATCAGAGAGCAACCATGC +
Preference number: 6 (lower is better)
Translates to: GLVWSVSKCCFK*STTPNIREQPC
Trigger: GCATGGTTGCTCTCTGATATTTGGCGTTGTAGATCATTTAAAACAACACTTGCTGACCGACCACACTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000568906.5
CDS GCA 72 bp GTAGTTGCAGAACCTAGGGTTCCAATTTTTGTTCCATaGTTTTCCGTGTCAGATGTCTCTCCATCACTTTCA +
Preference number: 6 (lower is better)
Translates to: VVAEPRVPIFVP*FSVSDVSPSLS
Trigger: TGAAAGTGATGGAGAGACATCTGACACGGAAAAGCATGGAACAAAAATTGGAACCCTAGGTTCTGCAACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 72 bp TGCTCCACAGAAAACTTCAGTTCTTGGCTAGGCTCATaGAAACTTTCTGTTGACTCTGGTAAGGACAATCTA +
Preference number: 6 (lower is better)
Translates to: CSTENFSSWLGS*KLSVDSGKDNL
Trigger: TAGATTGTCCTTACCAGAGTCAACAGAAAGTTTCCATGAGCCTAGCCAAGAACTGAAGTTTTCTGTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS CAA 72 bp CTTAGAAAAGAACTGGTACAGGCTTCAGACCCACTATaGCCTTTGGTTGGCTCTTCCCCTTCTTTATTTATG +
Preference number: 6 (lower is better)
Translates to: LRKELVQASDPL*PLVGSSPSLFM
Trigger: CATAAATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAGCCTGTACCAGTTCTTTTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS CAA 90 bp AGAAAAGCTTACATACTATTAGCTTCCAGTAATTCCTTGGACACATaGCAGGCAGAGCTTGGTGGCACAGCATTCACATTCTCATCTTGT +
Preference number: 6 (lower is better)
Translates to: RKAYILLASSNSLDT*QAELGGTAFTFSSC
Trigger: ACAAGATGAGAATGTGAATGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAGTATGTAAGCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567772.2
CDS TCA 72 bp ACCTCGAAGGAAGCAGCGGAATCAGAAGAGGCCTTGTaGTTAAGAGATCCAGTATGTATTTCTTTTTGTGTT +
Preference number: 6 (lower is better)
Translates to: TSKEAAESEEAL*LRDPVCISFCV
Trigger: AACACAAAAAGAAATACATACTGGATCTCTTAATCACAAGGCCTCTTCTGATTCCGCTGCTTCCTTCGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS TCA 72 bp GAATTCTTTGATCCTTTTATGGAGGAGATCACAGTCTaGGTTTCTGCCACACTTACAGGGATGCCATCTTTA +
Preference number: 6 (lower is better)
Translates to: EFFDPFMEEITV*VSATLTGMPSL
Trigger: TAAAGATGGCATCCCTGTAAGTGTGGCAGAAACTCAGACTGTGATCTCCTCCATAAAAGGATCAAAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
CDS TCA 72 bp CAATCTCCTTGCTCTTTCCAAGGTGGTGCTTCTAAATaGTGCATGAGACAACACGGGAAATGCCATTTAAAA +
Preference number: 6 (lower is better)
Translates to: QSPCSFQGGASK*CMRQHGKCHLK
Trigger: TTTTAAATGGCATTTCCCGTGTTGTCTCATGCATCATTTAGAAGCACCACCTTGGAAAGAGCAAGGAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565660.5
CDS CCA 72 bp AGGTTTTCAAGTCTAGCAATAAGCCAGGGTGTGGACTaGCTGCAGATGTCATTTGTAATTCAGATTCTTTCT +
Preference number: 6 (lower is better)
Translates to: RFSSLAISQGVD*LQMSFVIQILS
Trigger: AGAAAGAATCTGAATTACAAATGACATCTGCAGCCAGTCCACACCCTGGCTTATTGCTAGACTTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CAA 90 bp AAAGACAATCTTAGAAAAGAACTGGTACAGGCTTCAGACCCACTATaGCCTTTGGTTGGCTCTTCCCCTTCTTTATTTATGCTAGAAAGA +
Preference number: 6 (lower is better)
Translates to: KDNLRKELVQASDPL*PLVGSSPSLFMLER
Trigger: TCTTTCTAGCATAAATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAAGCCTGTACCAGTTCTTTTCTAAGATTGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
CDS TCA 72 bp AGAGAGGTTTCTCTATCATTTCTGACTTGTTACCAGTaGTGTCTTTCAATCCCGACTGTAAATCCAGAGTCT +
Preference number: 6 (lower is better)
Translates to: REVSLSFLTCYQ*CLSIPTVNPES
Trigger: AGACTCTGGATTTACAGTCGGGATTGAAAGACATCACTGGTAACAAGTCAGAAATGATAGAGAAACCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 72 bp GTTTTCTGTGTTGGGGAATTACGTGTTTCATCAGTTTaGGGCTCCTGTATTCCTGTAGTTATCAAGCTAAAA +
Preference number: 6 (lower is better)
Translates to: VFCVGELRVSSV*GSCIPVVIKLK
Trigger: TTTTAGCTTGATAACTACAGGAATACAGGAGCCCCAAACTGATGAAACACGTAATTCCCCAACACAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1
CDS CCA 72 bp TATGTTTCTTGTAATCCCTGTAGAATCTGTATTCTATaGGTCCTCAGTGCACTCATCTCCATAGTTATCTGC +
Preference number: 6 (lower is better)
Translates to: YVSCNPCRICIL*VLSALISIVIC
Trigger: GCAGATAACTATGGAGATGAGTGCACTGAGGACCCATAGAATACAGATTCTACAGGGATTACAAGAAACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565500.5
ENST00000565611.5
ENST00000567772.2
CDS CCA 72 bp TTCAAGTCTTTTGCCAAATGCATCAAAGGTATTATATaGTCAGAGGATAATTGTGCACTATGTCGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: FKSFAKCIKGII*SEDNCALCRLW
Trigger: CCAAAGGCGACATAGTGCACAATTATCCTCTGACCATATAATACCTTTGATGCATTTGGCAAAAGACTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565380.5
ENST00000565611.5
ENST00000565948.1
CDS CCA 72 bp GATTTTGCAATGACTCATGACACTGTAGCACCTCTTTaGCCTTTCGTAAAGTATCATTTAAATTATCACCAG +
Preference number: 6 (lower is better)
Translates to: DFAMTHDTVAPL*PFVKYHLNYHQ
Trigger: CTGGTGATAATTTAAATGATACTTTACGAAAGGCCAAAGAGGTGCTACAGTGTCATGAGTCATTGCAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263805.8
ENST00000564754.7
ENST00000565948.1