Pregenerated sensors for ZNF100 (Homo sapiens)
Ensembl gene IDs: ENSG00000197020Ensembl transcript IDs: ENST00000305570.10, ENST00000358296.11, ENST00000614218.4, ENST00000624316.3
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCGGCAGGAGAATTGCGTaGACCCAGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: KTGLLVIQRINTRGDGYLGRRIA*TQEVEV Trigger: AACCTCCACCTCCTGGGTTCACGCAATTCTCCTGCC...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| 3UTR-3UTR CCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCGTAATCCCAGAACTTTaGGAAGCCGAGGCAGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KTGLLVIQRINTRGDGYLVIPEL*EAEAGK Trigger: TTTGCCTGCCTCGGCTTCCCAAAGTTCTGGGATTAC...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCTGCAGAATATTACTCTaGATGCCTAACGCACACATT | + |
|
Preference number: 2 (lower is better) Translates to: KTGLLVIQRINTRGDGYLCRILL*MPNAHI Trigger: AATGTGTGCGTTAGGCATTCAGAGTAATATTCTGCA...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS-3UTR GCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCCCCACATTGCACCACTaGACTCCAGCTTGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KTGLLVIQRINTRGDGYLPTLHH*TPAWAT Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGTGCAATGTGGG...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS-3UTR TCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCGGCAGGATAATTGCTTaGACCTGGAAGGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTGLLVIQRINTRGDGYLGRIIA*TWKAEV Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTATCCTGCC...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS-3UTR TCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCATGAGGTCAGGAGTTTaGAACCAGCCTGGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGLLVIQRINTRGDGYLMRSGV*NQPGQH Trigger: ATGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAT...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS-3UTR GCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCCTGAGGCAGGATAATTaGTTGAACCTGGAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTGLLVIQRINTRGDGYLLRQDN*LNLEGR Trigger: TCTGCCTTCCAGGTTCAAGCAATTATCCTGCCTCAG...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS-3UTR CCA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCATACCAACTTTCAGCTaGGTGCAGTGGCTTATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGLLVIQRINTRGDGYLIPTFS*VQWLMP Trigger: AGGCATAAGCCACTGCACCCAGCTGAAAGTTGGTAT...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS-3UTR CAA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCAGGCAGGATAATTGCTaGAACCTGGAAGGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KTGLLVIQRINTRGDGYLRQDNC*NLEGRG Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTATCCTGCCT...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS-3UTR CAA 90 bp | AAAACTGGGTTGCTTGTAATACAAAGGATAAATACTAGAGGTGATGGATACCTCTATGAGGTCAGGAGTTaGAAACCAGCCTGGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: KTGLLVIQRINTRGDGYLYEVRS*KPAWPT Trigger: TGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCATA...GAGGTATCCATCACCTCTAGTATTTATCCTTTGTATTACAAGCAACCCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358296.11 ENST00000614218.4 |
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| CDS GCA 72 bp | GTGAACTGCCAGCGAGGAGGCACCTGCTTGCGCGGGTaGAGCCTGGGCTGCGCCATTGTTGGGGGAGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VNCQRGGTCLRG*SLGCAIVGGGA Trigger: CGCCCCTCCCCCAACAATGGCGCAGCCCAGGCTGCACCCGCGCAAGCAGGTGCCTCCTCGCTGGCAGTTCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000305570.10 ENST00000624316.3 |
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| CDS GCA 72 bp | CGGGGTGGGCGGGTGAACTGCCAGCGAGGAGGCACCTaGTTGCGCGGGTGCAGCCTGGGCTGCGCCATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RGGRVNCQRGGT*LRGCSLGCAIV Trigger: AACAATGGCGCAGCCCAGGCTGCACCCGCGCAAGCAGGTGCCTCCTCGCTGGCAGTTCACCCGCCCACCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305570.10 ENST00000624316.3 |
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| CDS CAA 72 bp | GGTGGGCGGGTGAACTGCCAGCGAGGAGGCACCTGCTaGCGCGGGTGCAGCCTGGGCTGCGCCATTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGRVNCQRGGTC*RGCSLGCAIVG Trigger: CCCAACAATGGCGCAGCCCAGGCTGCACCCGCGCAAGCAGGTGCCTCCTCGCTGGCAGTTCACCCGCCCACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305570.10 ENST00000624316.3 |
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