RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMYND10 (Homo sapiens)

Ensembl gene IDs: ENSG00000004838

Ensembl transcript IDs: ENST00000231749.8, ENST00000360165.7, ENST00000431869.1, ENST00000442887.1, ENST00000443080.5, ENST00000468182.1, ENST00000475688.1, ENST00000478269.5, ENST00000490675.5

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGTGAGGAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTaGTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGT +
Preference number: 1 (lower is better)
Translates to: GVRRREIGQQLYRPL*SPLRRLGLRQRLDR
Trigger: ACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTCCTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR GCA 90 bp GGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTaGGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGG +
Preference number: 1 (lower is better)
Translates to: GGRSVSSFTARSALH*GDWGSGRGWTVILR
Trigger: CCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR GCA 90 bp CTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTaGATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGC +
Preference number: 1 (lower is better)
Translates to: LGLRQRLDRDLEVQG*ILGGFPWHGWSALS
Trigger: GCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 90 bp GCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTaGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCC +
Preference number: 1 (lower is better)
Translates to: ARSALHCGDWGSGRG*TVILRFRGAFWVDS
Trigger: GGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTaGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGT +
Preference number: 1 (lower is better)
Translates to: SVSSFTARSALHCGD*GSGRGWTVILRFRG
Trigger: ACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR TCA 90 bp AAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTaGAGCAACACACTTGGCCTACCCACTGGGTGGGGCAGGAAGTCT +
Preference number: 1 (lower is better)
Translates to: KRVPTSGPGPPGPVC*SNTLGLPTGWGRKS
Trigger: AGACTTCCTGCCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 90 bp CTTGGCCTACCCACTGGGTGGGGCAGGAAGTCTCGAGCCTTCACTTaGGGTGAGGAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCT +
Preference number: 1 (lower is better)
Translates to: LGLPTGWGRKSRAFT*GEEEGDRSAALPPA
Trigger: AGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCACCCAGTGGGTAGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR TCA 90 bp TCCTCCACCAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTaGATGGGCTCGCCCTGGCTGACTGTGGCATCGAGGATGGCTTGC +
Preference number: 1 (lower is better)
Translates to: SSTSVGTFPWVTSSS*MGSPWLTVASRMAC
Trigger: GCAAGCCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTGGTGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR CCA 90 bp ATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTaGCCTACCCACTGGGTGGGGCAGGAAGTCTCGAGCCTTCACTTG +
Preference number: 1 (lower is better)
Translates to: IRPWPSWSGLLKQHT*PTHWVGQEVSSLHL
Trigger: CAAGTGAAGGCTCGAGACTTCCTGCCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 90 bp ACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTaGTCCGGTTTGCTGAAGCAACACACTTGGCCTACCCACTGGGTG +
Preference number: 1 (lower is better)
Translates to: TVLEEEGPHIRPWPS*SGLLKQHTWPTHWV
Trigger: CACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 90 bp TCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTaGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGCA +
Preference number: 1 (lower is better)
Translates to: SGRGWTVILRFRGAF*VDSLGMGGRPSATA
Trigger: TGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 90 bp GCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTaGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACC +
Preference number: 1 (lower is better)
Translates to: ASFTVLEEEGPHIRP*PSWSGLLKQHTWPT
Trigger: GGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR GCA 90 bp CACCCTGCAGAACACAGGGAACACCTTCTGCTTCCACATCTCCACTaGGATCAGCTCCTCCACCAGTGTTGGGACCTTCCCATGGGTGAC +
Preference number: 1 (lower is better)
Translates to: HPAEHREHLLLPHLH*DQLLHQCWDLPMGD
Trigger: GTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGTGTTCTGCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR GCA 90 bp TGGGGCTTGAAGTCCTCCACCCTGCAGAACACAGGGAACACCTTCTaGTTCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTTGGG +
Preference number: 1 (lower is better)
Translates to: WGLKSSTLQNTGNTF*FHISTAISSSTSVG
Trigger: CCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGTGTTCTGCAGGGTGGAGGACTTCAAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR-3UTR TCA 90 bp GGGGGCCACAGTATGCCAACGGCTGCCCTCGAACTGCTGCAGCTTGCCTCCTTCTGGGCTCGCCCTGGCTaGCTGTGGCATCGAGGATGG +
Preference number: 2 (lower is better)
Translates to: GGHSMPTAALELLQLASFWARPG*LWHRGW
Trigger: CCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCA...GAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR-3UTR GCA 90 bp ACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTCTTTACCGCCCGCTCTaGTCTCCACTGCGGAGACTG +
Preference number: 2 (lower is better)
Translates to: TVLEEEGPHIRPWPSWSGLYRPL*SPLRRL
Trigger: CAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAG...ACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCTTCCCTTGGCATGGGTaGTCGGCCCTCAGCAACTGC +
Preference number: 2 (lower is better)
Translates to: SVSSFTARSALHCGDWGSFPWHG*SALSNC
Trigger: GCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAA...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCTGGGTGGATTCCCTTaGCATGGGTGGTCGGCCCTC +
Preference number: 2 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWLGGFP*HGWSAL
Trigger: GAGGGCCGACCACCCATGCCAAGGGAATCCACCCAG...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CCA 90 bp TCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCATGGATTCCCTTGGCATaGGTGGTCGGCCCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: SAALPPALLSTAETGAPAWIPLA*VVGPQQ
Trigger: TTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCA...TGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGGGCTCCGGCAGAGGCTaGACCGTGATCTTGAGGTTC +
Preference number: 2 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWGSGRG*TVILRF
Trigger: GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCC...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CAA 90 bp CTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTaGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGT +
Preference number: 2 (lower is better)
Translates to: LHCGDWGSGRGWTVI*RFRGAFWVDSLGMG
Trigger: ACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CAA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTaGGCCTACCCACTGGGTGGGGCAGGAAGTCTCGAGCCTTCACTT +
Preference number: 2 (lower is better)
Translates to: HPALALLVRFAEATH*AYPLGGAGSLEPSL
Trigger: AAGTGAAGGCTCGAGACTTCCTGCCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CCA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACGGGGTGCATTCTGGGTaGATTCCCTTGGCATGGGTG +
Preference number: 2 (lower is better)
Translates to: HPALALLVRFAEATHLAYGVHSG*IPLAWV
Trigger: CACCCATGCCAAGGGAATCCACCCAGAATGCACCCC...GTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGTTCAGGGGTGCATTCTaGGTGGATTCCCTTGGCATG +
Preference number: 2 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWFRGAF*VDSLGM
Trigger: CATGCCAAGGGAATCCACCCAGAATGCACCCCTGAA...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CAA 90 bp CTCCAGGGACTATGCTCCAGCAGTTCCACCAGGAGGCAGGGCAGGTaGTGTGTGCTAAGCATACGGCTCAAGGTGCTGAGAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LQGLCSSSSTRRQGR*CVLSIRLKVLRERL
Trigger: CAGCCTCTCTCTCAGCACCTTGAGCCGTATGCTTAGCACACACAACCTGCCCTGCCTCCTGGTGGAACTGCTGGAGCATAGTCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR-3UTR GCA 90 bp CAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCATCGAGGATGGCTTaGATGTTCAGCTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: QCWDLPMGDQQLLNGLALASRMA*MFSFSR
Trigger: CCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGC...CAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR-3UTR GCA 90 bp CTCCTCCACCAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGGCATCGAGGATGGCTTaGATGTTCAGCTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: LLHQCWDLPMGDQQLLNGASRMA*MFSFSR
Trigger: CCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGC...CCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR-3UTR GCA 90 bp GGCAGGTTGTGTGTGCTAAGCATACGGCTCAAGGTGCTGAGAGAGAGGCTGTCCAGCTCTGCCTGCTTCTaGAGCTCCTTGTGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: GRLCVLSIRLKVLRERLSSSACF*SSLWKN
Trigger: GTTCTTCCACAAGGAGCTGCAGAAGCAGGCAGAGCT...GGACAGCCTCTCTCTCAGCACCTTGAGCCGTATGCTTAGCACACACAACCTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR-3UTR CCA 90 bp CAGCTCCTTGTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGCTCCTCCACCAGTGTTaGGACCTTCCCATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: QLLVEEHCLQEVDDGGLVLLHQC*DLPMGD
Trigger: GTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG...CACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCACAAGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR-3UTR GCA 90 bp GTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACACAGGGAACACCTTCTaGTTCCACATCTCCACTGCG +
Preference number: 2 (lower is better)
Translates to: VEEHCLQEVDDGGLVVHHTGNTF*FHISTA
Trigger: CGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGT...GTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR-3UTR TCA 90 bp AGTACTGAGAGGGCCTTCAGTGCAATCTCAAATTCCATCAGCTCTGCCTGCTTCAGGTGTTCTGGGGCTTaGAGTCCTCCACCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: STERAFSAISNSISSACFRCSGA*SPPPCR
Trigger: TCTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCT...GAAGCAGGCAGAGCTGATGGAATTTGAGATTGCACTGAAGGCCCTCTCAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR-3UTR GCA 90 bp CTGCAGCTCCTTGTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCACAGGGAACACCTTCTaGTTCCACATCTCCACTGCG +
Preference number: 2 (lower is better)
Translates to: LQLLVEEHCLQEVDDGGLTGNTF*FHISTA
Trigger: CGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGT...GAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCACAAGGAGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR-3UTR CCA 90 bp CTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGTAGATGGGGAACTGTGGCATCGAGGATaGCTTGCATGTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: LQEVDDGGLVVHHHVDGELWHRG*LACSAS
Trigger: AGAAGCTGAACATGCAAGCCATCCTCGATGCCACAG...TTCCCCATCTACATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR-3UTR CCA 90 bp TCCAAGACAGTGTCTTCTGCTGACTCACACACCTCCTTGTGGAAGAACACTGTCCTCCTCCACCAGTGTTaGGACCTTCCCATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: SKTVSSADSHTSLWKNTVLLHQC*DLPMGD
Trigger: GTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG...GACAGTGTTCTTCCACAAGGAGGTGTGTGAGTCAGCAGAAGACACTGTCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431869.1
3UTR-3UTR CCA 90 bp CTACCAAGTCCAAGACAGTGTCTTCTGCTGACTCACACACCTCCTTGTGGAAGACTGTGGCATCGAGGATaGCTTGCATGTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: LPSPRQCLLLTHTPPCGRLWHRG*LACSAS
Trigger: AGAAGCTGAACATGCAAGCCATCCTCGATGCCACAG...TCTTCCACAAGGAGGTGTGTGAGTCAGCAGAAGACACTGTCTTGGACTTGGTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431869.1
3UTR TCA 72 bp CCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTaGAGCAACACACTTGGCCTACCCACTGGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: PTSGPGPPGPVC*SNTLGLPTGWG
Trigger: GCCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR GCA 72 bp AGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTaGTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: RREIGQQLYRPL*SPLRRLGLRQR
Trigger: CCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 72 bp AGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTaGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGG +
Preference number: 3 (lower is better)
Translates to: SFTARSALHCGD*GSGRGWTVILR
Trigger: CCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 72 bp GCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTaGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGG +
Preference number: 3 (lower is better)
Translates to: ALHCGDWGSGRG*TVILRFRGAFW
Trigger: CCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 72 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTaGTCCGGTTTGCTGAAGCAACACACTTGGCCTACC +
Preference number: 3 (lower is better)
Translates to: EEEGPHIRPWPS*SGLLKQHTWPT
Trigger: GGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CAA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGTCTGGGTGGATTCCCTaGGCATGGGTGGTCGGCCCT +
Preference number: 3 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWSGWIP*AWVVGP
Trigger: AGGGCCGACCACCCATGCCAAGGGAATCCACCCAGA...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CAA 90 bp GCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGTCTGGGTGGATTCCCTaGGCATGGGTGGTCGGCCCT +
Preference number: 3 (lower is better)
Translates to: AGSLEPSLGVRRREIGQQSGWIP*AWVVGP
Trigger: AGGGCCGACCACCCATGCCAAGGGAATCCACCCAGA...CTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 72 bp TGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTaGCCTACCCACTGGGTGGGGCAGGAAGTCTCGAGC +
Preference number: 3 (lower is better)
Translates to: WPSWSGLLKQHT*PTHWVGQEVSS
Trigger: GCTCGAGACTTCCTGCCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CAA 90 bp GAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGCTGGACCGTGATCTaGAGGTTCAGGGGTGCATTC +
Preference number: 3 (lower is better)
Translates to: EGDRSAALPPALLSTAETGWTVI*RFRGAF
Trigger: GAATGCACCCCTGAACCTCAAGATCACGGTCCAGCC...AGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CAA 90 bp GTATGCCAACGGCTGCCCTCGAACTGCTGCAGCTTGCCTCCTTCCCGCCGGCTCTGCTTCTGCAGCTCCTaGTGGAAGAACACTGTCTCC +
Preference number: 3 (lower is better)
Translates to: VCQRLPSNCCSLPPSRRLCFCSS*WKNTVS
Trigger: GGAGACAGTGTTCTTCCACAAGGAGCTGCAGAAGCA...GAGCCGGCGGGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR GCA 72 bp CGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTaGATTCTGGGTGGATTCCCTTGGCATGGGTGGTCG +
Preference number: 3 (lower is better)
Translates to: RQRLDRDLEVQG*ILGGFPWHGWS
Trigger: CGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CCA 72 bp GGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTaGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: GWTVILRFRGAF*VDSLGMGGRPS
Trigger: TGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR-3UTR CAA 90 bp CAGGGCAGGTTGTGTGTGCTAAGCATACGGCTCAAGGTGCTGAGAGAGAGGCTGACTGTCTCCAAGAGGTaGATGATGGAGGCCTCGTGG +
Preference number: 3 (lower is better)
Translates to: QGRLCVLSIRLKVLRERLTVSKR*MMEASW
Trigger: CCACGAGGCCTCCATCATCAACCTCTTGGAGACAGT...CAGCCTCTCTCTCAGCACCTTGAGCCGTATGCTTAGCACACACAACCTGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
3UTR GCA 72 bp AAGTCCTCCACCCTGCAGAACACAGGGAACACCTTCTaGTTCCACATCTCCACTGCGATCAGCTCCTCCACC +
Preference number: 3 (lower is better)
Translates to: KSSTLQNTGNTF*FHISTAISSST
Trigger: GGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGTGTTCTGCAGGGTGGAGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR-3UTR CAA 90 bp CTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGTAGATGGGGAAGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: LQEVDDGGLVVHHHVDGEGIEDG*HVQLLQ
Trigger: CTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCC...TTCCCCATCTACATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
3UTR GCA 72 bp GAGGGCCTTCAGTGCAATCTCAAATTCCATCAGCTCTaGCTGCTTCTGCAGCTCCTTGTGGAAGAACACTGT +
Preference number: 3 (lower is better)
Translates to: EGLQCNLKFHQL*LLLQLLVEEHC
Trigger: ACAGTGTTCTTCCACAAGGAGCTGCAGAAGCAGGCAGAGCTGATGGAATTTGAGATTGCACTGAAGGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR CCA 90 bp TCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCACTCCACTGCGGAGACTaGGGCTCCGGCAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SAALPPALLSTAETGAPALHCGD*GSGRGW
Trigger: CCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG...TGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCTGGGCTCGCCCTGGCTaGCTGTGGCATCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: RRLGLRQRLDRDLEVQGCWARPG*LWHRGW
Trigger: CCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCA...GCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCCGCGTAGCGGGAAGCTaGGCAGACCCCGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: AFWVDSLGMGGRPSATAARVAGS*ADPAPA
Trigger: TGCTGGTGCGGGGTCTGCGCAGCTTCCCGCTACGCG...GGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCTGCCCTCGAACTGCTaGAGCTTGCCTCCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKLPSNC*SLPPSR
Trigger: GCGGGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAG...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231749.8
CDS-3UTR GCA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACGCCCACCTTCGCGCCTaGAGCCGCAGGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HPALALLVRFAEATHLAYAHLRA*SRRSCS
Trigger: AGAGCAGGACCTGCGGCTGCAGGCGCGAAGGTGGGC...GTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCCGCTCTGCTCTCCACTaGGGAGACTGGGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: EVQGCILGGFPWHGWSALRSALH*GDWGSG
Trigger: GCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCG...GAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCGCTCTGCTCTCCACTaGGGAGACTGGGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SPLRRLGLRQRLDRDLEVRSALH*GDWGSG
Trigger: GCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCG...AACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGCGGCTGCCCTCGAACTaGTGCAGCTTGCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EEGDRSAALPPALLSTAERLPSN*CSLPGE
Trigger: CTCCCCAGGCAAGCTGCAGCAGTTCGAGGGCAGCCG...CTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360165.7
CDS-3UTR CCA 90 bp TCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCACTGGGTGGATTCCCTTaGCATGGGTGGTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SAALPPALLSTAETGAPALGGFP*HGWSAL
Trigger: GAGGGCCGACCACCCATGCCAAGGGAATCCACCCAG...TGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATGGCTCCGGCAGAGGCTaGACCGTGATCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLCSPLRRLGLRQRLDRDGSGRG*TVILRF
Trigger: GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCC...ATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCCGGCCCTGGCCCTCCTaGTCCGGTTTGCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSRPWPS*SGLLKQ
Trigger: TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCG...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCCCCACATCCGGCCCTaGCCCTCCTGGTCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LYCARGRGSPHPALALLVPHIRP*PSWSGL
Trigger: CAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG...GACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGCCCCACATCCGGCCCTaGCCCTCCTGGTCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LGLRQRLDRDLEVQGCILPHIRP*PSWSGL
Trigger: CAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG...CAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp TCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTTGGGCTCGCCCTGGCTaGCTGTGGCATCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: SPLRRLGLRQRLDRDLEVWARPG*LWHRGW
Trigger: CCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCA...AACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGGACGGACCCCGACGGTaGCAAAGTCTGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWDGPRR*QSLGQD
Trigger: GTCCTGTCCCAGACTTTGGCACCGTCGGGGTCCGTC...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCACGCGTAGCGGGAAGCTaGGCAGACCCCGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: WGRKSRAFTWGEEEGDRSRVAGS*ADPAPA
Trigger: TGCTGGTGCGGGGTCTGCGCAGCTTCCCGCTACGCG...TGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGCGAACTGCTGCAGCTTaGCTCCTTCCCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GSGRGWTVILRFRGAFWVRTAAA*LLPAGS
Trigger: GGAGCCGGCGGGAAGGAGGCAAGCTGCAGCAGTTCG...CACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231749.8
CDS-3UTR GCA 90 bp CCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACTGTGGCATCCGGCTGCCCTCGAACTaGTGCAGCTTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PMGDQQLLNGLALADCGIRLPSN*CSLPPS
Trigger: GGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAGCCG...GATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp CGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCTGCAGCCGCAGGTCCTaGTCTGAGGGGCTGAACACA +
Preference number: 4 (lower is better)
Translates to: RRLGLRQRLDRDLEVQGCCSRRS*SEGLNT
Trigger: TGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCA...GCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGCCCACCTTCGCGCCTaGAGCCGCAGGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRKSRAFTWGEEEGDRSAAHLRA*SRRSCS
Trigger: AGAGCAGGACCTGCGGCTGCAGGCGCGAAGGTGGGC...TGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCCTTTACCGCCCGCTCTaGTCTCCACTGCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSLYRPL*SPLRRL
Trigger: CAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAG...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGGGGCAGCAGCCGGGGTaGGGATGCTGTCACATTCGG +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWGQQPG*GCCHIR
Trigger: CCGAATGTGACAGCATCCCCACCCCGGCTGCTGCCC...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCATGGGGTTGCTGTCCTaGGATCCCTCCCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ASFTVLEEEGPHIRPWPSMGLLS*DPSPSG
Trigger: CCCTGAGGGGGAGGGATCCCAGGACAGCAACCCCAT...GGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGGAAACTCTGCAAGTaGGCCAGGTTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSSFTARSALHCGDWGSGRKLCK*ARLGSW
Trigger: CCAGCTGCCCAACCTGGCCCACTTGCAGAGTTTCCT...GCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGTTCCCTTGGCATGGGTaGTCGGCCCTCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKFPWHG*SALSNC
Trigger: GCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAA...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCACTTGGCCTACCCACTaGGTGGGGCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSTWPTH*VGQEVS
Trigger: CGAGACTTCCTGCCCCACCCAGTGGGTAGGCCAAGT...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGCGGCCCTGGCCCTCCTaGTCCGGTTTGCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: EEGDRSAALPPALLSTAERPWPS*SGLLKQ
Trigger: TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCG...CTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCACTGCTGCAGCTTGCCTaGGGAGAGGAACCAGCACAC +
Preference number: 4 (lower is better)
Translates to: SAALPPALLSTAETGAPALLQLA*GEEPAH
Trigger: GTGTGCTGGTTCCTCTCCCCAGGCAAGCTGCAGCAG...TGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360165.7
CDS-3UTR TCA 90 bp AGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACAGGACCTTCCCATGGGTaGCCAGCAGCTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: RGSPHPALALLVRFAEATGPSHG*PAAPEW
Trigger: CCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCC...TGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCAGGTGTTCTGGGGCTTaGAGTCCTCCACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RRLGLRQRLDRDLEVQGCRCSGA*SPPPCR
Trigger: TCTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCT...GCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp GAGGAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGCCTGCTCTGAGGGGCTaGACACATGCTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EEEGDRSAALPPALLSTAPALRG*THAGAG
Trigger: ACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGG...CGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCGCAGGTCCTGCTCTaGGGGGCTGAACACATGCTG +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWPQVLL*GAEHML
Trigger: CAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGG...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp GGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGCCGCAGGTCCTGCTCTaGGGGGCTGAACACATGCTG +
Preference number: 4 (lower is better)
Translates to: GSGRGWTVILRFRGAFWVPQVLL*GAEHML
Trigger: CAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGG...CACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGAGCCTTCACTTGGGGTaGGGAGGAGGGAGATCGGTC +
Preference number: 4 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWSLHLG*GGGRSV
Trigger: GACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCT...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp GCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCAGCCTTCACTTGGGGTaGGGAGGAGGGAGATCGGTC +
Preference number: 4 (lower is better)
Translates to: ASFTVLEEEGPHIRPWPSSLHLG*GGGRSV
Trigger: GACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCT...GGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCCTGGTCCGGTTTGCTaGAGCAACACACTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: PLCSPLRRLGLRQRLDRDPGPVC*SNTLGL
Trigger: TAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGG...ATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCTCCAGGTTCTCATGCTaGTGGTTCCACCCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: VSSFTARSALHCGDWGSGSRFSC*WFHPSE
Trigger: CTCCGAAGGGTGGAACCAGCAGCATGAGAACCTGGA...GCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACCGGCTGCCCTCGAACTaGTGCAGCTTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HPALALLVRFAEATHLAYRLPSN*CSLPPS
Trigger: GGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAGCCG...GTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231749.8
CDS-3UTR GCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCCAGTATGCCAACGGCTaGCCTCGAACTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSQYANG*PRTAAA
Trigger: AGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTG...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGGAGGGGGCCACAGTATaGCAACGGCTGCCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWEGATV*QRLPSN
Trigger: GTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTC...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACGAGGGGGCCACAGTATaGCAACGGCTGCCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: QGCILGGFPWHGWSALSNEGATV*QRLPSN
Trigger: GTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTC...GTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp AGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACATGGGCCAGGAAACTCTaGAAGTGGGCCAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RGSPHPALALLVRFAEATWARKL*KWARLG
Trigger: GCCCAACCTGGCCCACTTGCAGAGTTTCCTGGCCCA...TGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTCGGCCCTCAGCAACTaGAGCCCTCATTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALHCGDWGSGRGWTVILRSALSN*SPHLAL
Trigger: CAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGA...CCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCTTTACCGCCCGCTCTaGTCTCCACTGCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWLYRPL*SPLRRL
Trigger: CAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAG...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACGAACTGCTGCAGCTTaGCTGGGGAGAGGAACCAGC +
Preference number: 4 (lower is better)
Translates to: EEGPHIRPWPSWSGLLKQRTAAA*LGRGTS
Trigger: GCTGGTTCCTCTCCCCAGGCAAGCTGCAGCAGTTCG...TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360165.7
CDS-3UTR GCA 90 bp TCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCTGCCCTCGAACTGCTaGAGCTTGCCTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SPLRRLGLRQRLDRDLEVLPSNC*SLPGER
Trigger: CCTCTCCCCAGGCAAGCTGCAGCAGTTCGAGGGCAG...AACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360165.7
CDS-3UTR GCA 90 bp CAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGCTGGTTCCACCTaGCCTTCGGAGCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: QCWDLPMGDQQLLNGLALAAGST*PSEPIS
Trigger: CGAGATGGGCTCCGAAGGGCAGGTGGAACCAGCAGC...CAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CCA 90 bp TGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACCAGTTGCGGGACGGTTaGGGAGCGTCAGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: WDLPMGDQQLLNGLALADQLRDG*GASVLA
Trigger: TGCGAGAACTGACGCTCCCCAACCGTCCCGCAACTG...GTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR CCA 90 bp TCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGACGGTGCCAAAGTCTaGGACAGGACAGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SAALPPALLSTAETGAPADGAKV*DRTVAG
Trigger: TCCCGCAACTGTCCTGTCCCAGACTTTGGCACCGTC...TGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGGGCAGCAGCCGGGGTaGGGATGCTGTCACATTCGG +
Preference number: 4 (lower is better)
Translates to: GRKSRAFTWGEEEGDRSAGQQPG*GCCHIR
Trigger: CCGAATGTGACAGCATCCCCACCCCGGCTGCTGCCC...TGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp AGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACAGCCAGGTTGGGCAGCTaGTCCAGCAGTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGSPHPALALLVRFAEATARLGS*SSSVSV
Trigger: CACAGACACACTGCTGGACCAGCTGCCCAACCTGGC...TGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGGCCAGGTTGGGCAGCTaGTCCAGCAGTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: EEGDRSAALPPALLSTAEARLGS*SSSVSV
Trigger: CACAGACACACTGCTGGACCAGCTGCCCAACCTGGC...CTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCGCTGGAGCTGGTGCTTaGCAATTGCCTGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: RRLGLRQRLDRDLEVQGCAGAGA*QLPATC
Trigger: GCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGC...GCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTGGCTCTGTCACCCTaGGCTGCCAGGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: ALHCGDWGSGRGWTVILRLALSP*AARTQV
Trigger: GACTTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAA...CCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGACTGCAGCCCTCATTTaGCTCTGTCACCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKTAALI*LCHPGL
Trigger: CAGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGT...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp ACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTGGATTCCCTTGGCATaGGTGGTCGGCCCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TVLEEEGPHIRPWPSWSGWIPLA*VVGPQQ
Trigger: TTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCA...ACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGCTGGGTGGATTCCCTTaGCATGGGTGGTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGLRQRLDRDLEVQGCILLGGFP*HGWSAL
Trigger: GAGGGCCGACCACCCATGCCAAGGGAATCCACCCAG...CAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCACTGAAGCAACACACTTaGCCTACCCACTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRGSPHPALALLVRFAEALKQHT*PTHWVG
Trigger: CCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAG...TGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCTGAAGCAACACACTTaGCCTACCCACTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKLKQHT*PTHWVG
Trigger: CCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAG...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CACCAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCGGACCTTCCCATGGGTaGCCAGCAGCTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: HQCWDLPMGDQQLLNGLAGPSHG*PAAPEW
Trigger: CCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCC...GGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp CCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACTGTGGCATCAGGTGTTCTGGGGCTTaGAGTCCTCCACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PMGDQQLLNGLALADCGIRCSGA*SPPPCR
Trigger: TCTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCT...GATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp TGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACAGGTGTTCTGGGGCTTaGAGTCCTCCACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WDLPMGDQQLLNGLALADRCSGA*SPPPCR
Trigger: TCTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCT...GTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCTGCTCTGAGGGGCTaGACACATGCTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWPALRG*THAGAG
Trigger: ACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGG...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGACGGACCCCGACGGTaGCAAAGTCTGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: WGRKSRAFTWGEEEGDRSDGPRR*QSLGQD
Trigger: GTCCTGTCCCAGACTTTGGCACCGTCGGGGTCCGTC...TGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATTTCTCCAGGTTCTCATaGTGCTGGTTCCACCCTTCG +
Preference number: 4 (lower is better)
Translates to: PLCSPLRRLGLRQRLDRDFSRFS*CWFHPS
Trigger: CGAAGGGTGGAACCAGCAGCATGAGAACCTGGAGAA...ATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAATGCTTCTGCAGCTCCTaGATGGGGTTGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EEGPHIRPWPSWSGLLKQCFCSS*MGLLSW
Trigger: CCAGGACAGCAACCCCATGCAGGAGCTGCAGAAGCA...TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGAGCTCTGCCTGCTTCTaGAGCTCCTGCATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: EEEGDRSAALPPALLSTASSACF*SSCMGL
Trigger: CAACCCCATGCAGGAGCTGCAGAAGCAGGCAGAGCT...CGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGTTGCTCAGCTTTTGCTaGTCTGAGGGGGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: LYRPLCSPLRRLGLRQRLLLSFC*SEGATV
Trigger: TACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAA...CAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGACATGCTGGAGCTGGTaGTTGGCAATTGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKTCWSW*LAIACH
Trigger: GTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGT...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAAGAGGGGCTGAACACATaGTGGAGCTGGTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: EEGPHIRPWPSWSGLLKQEGLNT*WSWCLA
Trigger: TGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTC...TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTCTGTCACCCTGGGCTaGCAGGACACAAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ALHCGDWGSGRGWTVILRSVTLG*QDTSLS
Trigger: GGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAGA...CCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGTTGCGGGACGGTTaGGGAGCGTCAGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: SPLRRLGLRQRLDRDLEVQLRDG*GASVLA
Trigger: TGCGAGAACTGACGCTCCCCAACCGTCCCGCAACTG...AACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACCAGTTGCGGGACGGTTaGGGAGCGTCAGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: QGCILGGFPWHGWSALSNQLRDG*GASVLA
Trigger: TGCGAGAACTGACGCTCCCCAACCGTCCCGCAACTG...GTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCTCCTCCACCAGTGTTaGGACCTTCCCATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWLLHQC*DLPMGD
Trigger: GTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAATGGGGAAGGTGTTCTaGGGCTTGAAGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SAALPPALLSTAETGAPAMGKVF*GLKSST
Trigger: GGTGGAGGACTTCAAGCCCCAGAACACCTTCCCCAT...TGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAATGGGGAAGGTGTTCTaGGGCTTGAAGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GRGSPHPALALLVRFAEAMGKVF*GLKSST
Trigger: GGTGGAGGACTTCAAGCCCCAGAACACCTTCCCCAT...TGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCAAGGAAACTCTGCAAGTaGGCCAGGTTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GDWGSGRGWTVILRFRGARKLCK*ARLGSW
Trigger: CCAGCTGCCCAACCTGGCCCACTTGCAGAGTTTCCT...TGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGTTGGCTCTGTCACCCTaGGCTGCCAGGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: HCGDWGSGRGWTVILRFRLALSP*AARTQV
Trigger: GACTTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAA...CCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCTTCCCTTGGCATGGGTaGTCGGCCCTCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: EVQGCILGGFPWHGWSALFPWHG*SALSNC
Trigger: GCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAA...GAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGGGGTGCATTCTGGGTaGATTCCCTTGGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: EEEGDRSAALPPALLSTAGVHSG*IPLAWV
Trigger: CACCCATGCCAAGGGAATCCACCCAGAATGCACCCC...CGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGGGCTCCGGCAGAGGCTaGACCGTGATCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWGSGRG*TVILRF
Trigger: GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCC...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp AGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGCTTTACCTCCACTGCGGAGACTaGGGCTCCGGCAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLEPSLGVRRREIGQQLYLHCGD*GSGRGW
Trigger: CCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG...GTAAAGCTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CAA 72 bp CTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTaGGCCTACCCACTGGGTGGGGCAGGAAGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: LALLVRFAEATH*AYPLGGAGSLE
Trigger: CTCGAGACTTCCTGCCCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp AGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGGTGACCAGCAGCTCCTaGATGGGCTCGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLDRDLEVQGCILGGFPWVTSSS*MGSPWL
Trigger: CAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCAC...CCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp AGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGGACCTTCCCATGGGTaGCCAGCAGCTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: RFRGAFWVDSLGMGGRPSGPSHG*PAAPEW
Trigger: CCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCC...TGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGAGGTGTTCTGGGGCTTaGAGTCCTCCACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWRCSGA*SPPPCR
Trigger: TCTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCT...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp CTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCTACGGCTCAAGGTGCTaGGAGAGAGGCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: LYCARGRGSPHPALALLVYGSRC*ERGCPH
Trigger: GTGTGGACAGCCTCTCTCTCAGCACCTTGAGCCGTA...GACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231749.8
CDS-3UTR TCA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACCCTTGGCAAAACTTGTaGGGCAGTAGCGCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HPALALLVRFAEATHLAYPWQNL*GSSAPE
Trigger: CTCAGGCGCGCTACTGCCTCACAAGTTTTGCCAAGG...GTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp AGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGCTTTTCCCAGTGCTTaGCTTGGCACTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: REIGQQLYRPLCSPLRRLAFPSA*LGTPCS
Trigger: GCTGCAGGGAGTGCCAAGTCAAGCACTGGGAAAAGC...CAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGGCATCGAGGATGGCTTaGATGTTCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKASRMA*MFSFSR
Trigger: CCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGC...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGCATCGAGGATGGCTTaGATGTTCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSASRMA*MFSFSR
Trigger: CCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGC...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCAGTATGCCAACGGCTaGCCTCGAACTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWQYANG*PRTAAA
Trigger: AGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTG...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGTTGCTCAGCTTTTGCTaGTCTGAGGGGGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKLLSFC*SEGATV
Trigger: TACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAA...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCAACTTGCTCAGCTTTTaGTGCTCTGAGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSNLLSF*CSEGAT
Trigger: TGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTT...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCCTTGCCCGTCCAACTTaGTCAGCTTTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSLARPT*SAFAAL
Trigger: CAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAG...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACAGGGCGATCCACACTTaGCCGTCCAACTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HPALALLVRFAEATHLAYRAIHT*PSNLLS
Trigger: GCTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCT...GTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGTGGGCCAGGAAACTCTaGAAGTGGGCCAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGSLEPSLGVRRREIGQQWARKL*KWARLG
Trigger: GCCCAACCTGGCCCACTTGCAGAGTTTCCTGGCCCA...CTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGGAGGGGCTGAACACATaGTGGAGCTGGTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWEGLNT*WSWCLA
Trigger: TGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTC...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTCGGCCCTCAGCAACTaGAGCCCTCATTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DWGSGRGWTVILRFRGAFSALSN*SPHLAL
Trigger: CAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGA...GAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCCTTGAGGTTCAGGGGTaGATTCTGGGTGGATTCCCT +
Preference number: 4 (lower is better)
Translates to: RRLGLRQRLDRDLEVQGCLEVQG*ILGGFP
Trigger: AGGGAATCCACCCAGAATGCACCCCTGAACCTCAAG...GCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp AGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGCTCCTCCACCAGTGTTaGGACCTTCCCATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: REIGQQLYRPLCSPLRRLLLHQC*DLPMGD
Trigger: GTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG...CAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCACCGCTCCCAGATTTCTaGGATCTGTTCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: SAALPPALLSTAETGAPAPLPDF*DLFQHQ
Trigger: CTGGTGTTGGAACAGATCCCAGAAATCTGGGAGCGG...TGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACACTGCAGCCCTCATTTaGCTCTGTCACCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGCILGGFPWHGWSALSNTAALI*LCHPGL
Trigger: CAGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGT...GTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGTGGATTCCCTTGGCATaGGTGGTCGGCCCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWWIPLA*VVGPQQ
Trigger: TTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCA...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp AGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGCTTTACGGCCTACCCACTGGGTaGGGCAGGAAGTCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: SLEPSLGVRRREIGQQLYGLPTG*GRKSRA
Trigger: GGCTCGAGACTTCCTGCCCCACCCAGTGGGTAGGCC...GTAAAGCTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAACTTGGCCTACCCACTaGGTGGGGCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: WGRKSRAFTWGEEEGDRSTWPTH*VGQEVS
Trigger: CGAGACTTCCTGCCCCACCCAGTGGGTAGGCCAAGT...TGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CAA 72 bp GGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTaGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: GDWGSGRGWTVI*RFRGAFWVDSL
Trigger: AAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp GAAGTCCTCCACCCTGCAGAACACAGGGAACACCTTCTGCTTCCACATCTCCACTGGGCTCGCCCTGGCTaGCTGTGGCATCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: EVLHPAEHREHLLLPHLHWARPG*LWHRGW
Trigger: CCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCA...GTGGAGATGTGGAAGCAGAAGGTGTTCCCTGTGTTCTGCAGGGTGGAGGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp GTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACTGGGCTCGCCCTGGCTaGCTGTGGCATCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: VEEHCLQEVDDGGLVVHHWARPG*LWHRGW
Trigger: CCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCA...GTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp GACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCCTCATTCTGGCATCGTaGGCAGCGCTTAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: DWGSGRGWTVILRFRGAFLILAS*AALRSL
Trigger: GAGGCTTCTAAGCGCTGCTCACGATGCCAGAATGAG...GAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp TACCCACTGGGTGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGCCTGGTCCGGTTTGCTaGAGCAACACACTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: YPLGGAGSLEPSLGVRRRPGPVC*SNTLGL
Trigger: TAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGG...CCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCACCCAGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACGCATCGAGGATGGCTTaGATGTTCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WDLPMGDQQLLNGLALADASRMA*MFSFSR
Trigger: CCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGC...GTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR GCA 90 bp GGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCCAGCAGGGTCAGTTTaGGGTGGCAATAGTCTACCA +
Preference number: 4 (lower is better)
Translates to: GQLYCARGRGSPHPALALPAGSV*GGNSLP
Trigger: TGGTAGACTATTGCCACCGCAAACTGACCCTGCTGG...GAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGAGCTCTGCCTGCTTCTaGAGCTCCTGCATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: AGSLEPSLGVRRREIGQQSSACF*SSCMGL
Trigger: CAACCCCATGCAGGAGCTGCAGAAGCAGGCAGAGCT...CTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TTCTGCTTCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTTGGGACCTTCCGAACTGCTGCAGCTTaGCTCCTTCCCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: FCFHISTAISSSTSVGTFRTAAA*LLPAGS
Trigger: GGAGCCGGCGGGAAGGAGGCAAGCTGCAGCAGTTCG...GAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp CTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCCTTGCCCGTCCAACTTaGTCAGCTTTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LHCGDWGSGRGWTVILRFLARPT*SAFAAL
Trigger: CAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAG...GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAAGGGCGATCCACACTTaGCCGTCCAACTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WGRKSRAFTWGEEEGDRSRAIHT*PSNLLS
Trigger: GCTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCT...TGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTACATGCTGGAGCTGGTaGTTGGCAATTGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EGDRSAALPPALLSTAETTCWSW*LAIACH
Trigger: GTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGT...AGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTGCAGCCGCAGGTCCTaGTCTGAGGGGCTGAACACA +
Preference number: 4 (lower is better)
Translates to: SGRGWTVILRFRGAFWVDCSRRS*SEGLNT
Trigger: TGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCA...ATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTGCGCTTAGAAGCCTCTaGACTGCAGTAAGCACAGCG +
Preference number: 4 (lower is better)
Translates to: SPLRRLGLRQRLDRDLEVALRSL*TAVSTA
Trigger: CGCTGTGCTTACTGCAGTGCAGAGGCTTCTAAGCGC...AACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCGCGCTTAGAAGCCTCTaGACTGCAGTAAGCACAGCG +
Preference number: 4 (lower is better)
Translates to: AFWVDSLGMGGRPSATAAALRSL*TAVSTA
Trigger: CGCTGTGCTTACTGCAGTGCAGAGGCTTCTAAGCGC...GGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCTTGAGGTTCAGGGGTaGATTCTGGGTGGATTCCCT +
Preference number: 4 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWLEVQG*ILGGFP
Trigger: AGGGAATCCACCCAGAATGCACCCCTGAACCTCAAG...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGACGGTGCCAAAGTCTaGGACAGGACAGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: WGRKSRAFTWGEEEGDRSDGAKV*DRTVAG
Trigger: TCCCGCAACTGTCCTGTCCCAGACTTTGGCACCGTC...TGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CAGGTTGTGTGTGCTAAGCATACGGCTCAAGGTGCTGAGAGAGAGGCTGTCCACGGGCAGCAGCCGGGGTaGGGATGCTGTCACATTCGG +
Preference number: 4 (lower is better)
Translates to: QVVCAKHTAQGAEREAVHGQQPG*GCCHIR
Trigger: CCGAATGTGACAGCATCCCCACCCCGGCTGCTGCCC...GTGGACAGCCTCTCTCTCAGCACCTTGAGCCGTATGCTTAGCACACACAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR CCA 90 bp GGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAAGGTTCTCATGCTGCTaGTTCCACCCTTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GRKSRAFTWGEEEGDRSARFSCC*FHPSEP
Trigger: GGGCTCCGAAGGGTGGAACCAGCAGCATGAGAACCT...TGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCTGTGGCATCGAGGATaGCTTGCATGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKLWHRG*LACSAS
Trigger: AGAAGCTGAACATGCAAGCCATCCTCGATGCCACAG...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGATGGGGAAGGTGTTCTaGGGCTTGAAGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QCWDLPMGDQQLLNGLALMGKVF*GLKSST
Trigger: GGTGGAGGACTTCAAGCCCCAGAACACCTTCCCCAT...CAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CCA 90 bp GTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCTCACACACCTCCTTGTaGAAGAACACTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VSSFTARSALHCGDWGSGSHTSL*KNTVSK
Trigger: CTTGGAGACAGTGTTCTTCCACAAGGAGGTGTGTGA...GCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp AGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGATGGGGTTGCTGTCCTaGGATCCCTCCCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLDRDLEVQGCILGGFPWMGLLS*DPSPSG
Trigger: CCCTGAGGGGGAGGGATCCCAGGACAGCAACCCCAT...CCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACCGCTCCCAGATTTCTaGGATCTGTTCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: EEGPHIRPWPSWSGLLKQPLPDF*DLFQHQ
Trigger: CTGGTGTTGGAACAGATCCCAGAAATCTGGGAGCGG...TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCTCCCAGTGCTTGACTTaGCACTCCCTGCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: GQLYCARGRGSPHPALALSQCLT*HSLQQY
Trigger: GTATTGCTGCAGGGAGTGCCAAGTCAAGCACTGGGA...GAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGGGGGTGCATTCTGGGTaGATTCCCTTGGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: AGSLEPSLGVRRREIGQQGVHSG*IPLAWV
Trigger: CACCCATGCCAAGGGAATCCACCCAGAATGCACCCC...CTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCTTCAGGGGTGCATTCTaGGTGGATTCCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LHCGDWGSGRGWTVILRFFRGAF*VDSLGM
Trigger: CATGCCAAGGGAATCCACCCAGAATGCACCCCTGAA...GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CACCAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCAGGTTCTCATGCTGCTaGTTCCACCTGCCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: HQCWDLPMGDQQLLNGLARFSCC*FHLPFG
Trigger: TCCGAAGGGCAGGTGGAACCAGCAGCATGAGAACCT...GGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp GCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTGTCCACACAGTCTGTaGTGTAGCGTAGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: ALHCGDWGSGRGWTVILRCPHSL*CSVVLR
Trigger: TCTCAGTACTACGCTACATCACAGACTGTGTGGACA...CCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp TCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATGCTTTTCCCAGTGCTTaGCTTGGCACTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGRGWTVILRFRGAFWVDAFPSA*LGTPCS
Trigger: GCTGCAGGGAGTGCCAAGTCAAGCACTGGGAAAAGC...ATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCACAGGGAACACCTTCTaGTTCCACATCTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: LYCARGRGSPHPALALLVTGNTF*FHISTA
Trigger: CGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGT...GACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTAACTTGCTCAGCTTTTaGTGCTCTGAGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: EGDRSAALPPALLSTAETNLLSF*CSEGAT
Trigger: TGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTT...AGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCCAATTGCCTGCCACTTaGCTCTGTTTTCTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASFTVLEEEGPHIRPWPSQLPAT*LCFLAP
Trigger: TGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTG...GGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGCTGGTGCTTGGCAATTaGCTGCCACTTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGLRQRLDRDLEVQGCILLVLGN*LPLASV
Trigger: AACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAG...CAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTCCATGCTTTTCCCAGTaGTTGACTTGGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: EGDRSAALPPALLSTAETPCFSQ*LTWHSL
Trigger: CAGGGAGTGCCAAGTCAAGCACTGGGAAAAGCATGG...AGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CACCTCCTTGTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGGGCAGCAGCCGGGGTaGGGATGCTGTCACATTCGG +
Preference number: 4 (lower is better)
Translates to: HLLVEEHCLQEVDDGGLVGQQPG*GCCHIR
Trigger: CCGAATGTGACAGCATCCCCACCCCGGCTGCTGCCC...CACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCACAAGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR CCA 90 bp TCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATAGGTTCTCATGCTGCTaGTTCCACCCTTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGRGWTVILRFRGAFWVDRFSCC*FHPSEP
Trigger: GGGCTCCGAAGGGTGGAACCAGCAGCATGAGAACCT...ATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGCTGTGGCATCGAGGATaGCTTGCATGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: EEGDRSAALPPALLSTAELWHRG*LACSAS
Trigger: AGAAGCTGAACATGCAAGCCATCCTCGATGCCACAG...CTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp CCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACTGTGGCATCCTGTGGCATCGAGGATaGCTTGCATGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PMGDQQLLNGLALADCGILWHRG*LACSAS
Trigger: AGAAGCTGAACATGCAAGCCATCCTCGATGCCACAG...GATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CCA 90 bp GCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTCAGTTAGGGTCAGATaGGCCAGGAAACTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ASFTVLEEEGPHIRPWPSSVRVR*ARKLCK
Trigger: CTTGCAGAGTTTCCTGGCCCATCTGACCCTAACTGA...GGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCATCCTTCTTAGGAGGCTaGGTTTCAGTTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: GRGSPHPALALLVRFAEASFLGG*VSVRVR
Trigger: TCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGA...TGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TACCCACTGGGTGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGGGCTGAACACATGCTaGAGCTGGTGCTTGGCAATT +
Preference number: 4 (lower is better)
Translates to: YPLGGAGSLEPSLGVRRRGLNTC*SWCLAI
Trigger: AATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCC...CCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCACCCAGTGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCGGGCTGAACACATGCTaGAGCTGGTGCTTGGCAATT +
Preference number: 4 (lower is better)
Translates to: DWGSGRGWTVILRFRGAFGLNTC*SWCLAI
Trigger: AATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCC...GAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCCAATACCACTCATTCTaGCATCGTGAGCAGCGCTTA +
Preference number: 4 (lower is better)
Translates to: SVSSFTARSALHCGDWGSQYHSF*HREQRL
Trigger: TAAGCGCTGCTCACGATGCCAGAATGAGTGGTATTG...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp TCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATCTCATTCTGGCATCGTaGGCAGCGCTTAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SGRGWTVILRFRGAFWVDLILAS*AALRSL
Trigger: GAGGCTTCTAAGCGCTGCTCACGATGCCAGAATGAG...ATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp AAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGGACGGACCCCGACGGTaGCAAAGTCTGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: KNTVSKRLMMEASWCTTMDGPRR*QSLGQD
Trigger: GTCCTGTCCCAGACTTTGGCACCGTCGGGGTCCGTC...CATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR GCA 90 bp TGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAACAGGGAACACCTTCTaGTTCCACATCTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: WGRKSRAFTWGEEEGDRSTGNTF*FHISTA
Trigger: CGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGT...TGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCACCAGCAGGGTCAGTTTaGGGTGGCAATAGTCTACCA +
Preference number: 4 (lower is better)
Translates to: GRKSRAFTWGEEEGDRSAPAGSV*GGNSLP
Trigger: TGGTAGACTATTGCCACCGCAAACTGACCCTGCTGG...TGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGTGCTTCTGCAGCTCCTaGATGGGGTTGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DLEVQGCILGGFPWHGWSCFCSS*MGLLSW
Trigger: CCAGGACAGCAACCCCATGCAGGAGCTGCAGAAGCA...CGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTCAATTGCCTGCCACTTaGCTCTGTTTTCTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGDRSAALPPALLSTAETQLPAT*LCFLAP
Trigger: TGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTG...AGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGTGCTTGGCAATTGCCTaGCACTTGCCTCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EEGDRSAALPPALLSTAECLAIA*HLPLFS
Trigger: AGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCA...CTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGCTGGTGCTTGGCAATTaGCTGCCACTTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AGSLEPSLGVRRREIGQQLVLGN*LPLASV
Trigger: AACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAG...CTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCACACAAGTCTTTCCATaGTTTTCCCAGTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: VSSFTARSALHCGDWGSGTQVFP*FSQCLT
Trigger: AGTCAAGCACTGGGAAAAGCATGGAAAGACTTGTGT...GCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACTCACACACCTCCTTGTaGAAGAACACTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: WDLPMGDQQLLNGLALADSHTSL*KNTVSK
Trigger: CTTGGAGACAGTGTTCTTCCACAAGGAGGTGTGTGA...GTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR CCA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGTCCTTCTTAGGAGGCTaGGTTTCAGTTAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWSFLGG*VSVRVR
Trigger: TCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGA...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp TTGTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCGGACCTTCCCATGGGTaGCCAGCAGCTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LWKNTVSKRLMMEASWCTGPSHG*PAAPEW
Trigger: CCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCC...GGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp CAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGTCCACACAGTCTGTaGTGTAGCGTAGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: QGCILGGFPWHGWSALSNCPHSL*CSVVLR
Trigger: TCTCAGTACTACGCTACATCACAGACTGTGTGGACA...GTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR TCA 90 bp GTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACTACGGCTCAAGGTGCTaGGAGAGAGGCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: VEEHCLQEVDDGGLVVHHYGSRC*ERGCPH
Trigger: GTGTGGACAGCCTCTCTCTCAGCACCTTGAGCCGTA...GTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp AGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGCTTTACTCCAGGTTCTCATGCTaGTGGTTCCACCCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: SLEPSLGVRRREIGQQLYSRFSC*WFHPSE
Trigger: CTCCGAAGGGTGGAACCAGCAGCATGAGAACCTGGA...GTAAAGCTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp TCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTTCTCCAGGTTCTCATaGTGCTGGTTCCACCCTTCG +
Preference number: 4 (lower is better)
Translates to: SGRGWTVILRFRGAFWVDFSRFS*CWFHPS
Trigger: CGAAGGGTGGAACCAGCAGCATGAGAACCTGGAGAA...ATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp CGTAGTACTGAGAGGGCCTTCAGTGCAATCTCAAATTCCATCAGCTCTGCCTGCCTGCCCTCGAACTGCTaGAGCTTGCCTCCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RSTERAFSAISNSISSACLPSNC*SLPPSR
Trigger: GCGGGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAG...GCAGGCAGAGCTGATGGAATTTGAGATTGCACTGAAGGCCCTCTCAGTACTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp GAAGTCCTCCACCCTGCAGAACACAGGGAACACCTTCTGCTTCCACATCTCCACCAGTATGCCAACGGCTaGCCTCGAACTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EVLHPAEHREHLLLPHLHQYANG*PRTAAA
Trigger: AGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTG...GTGGAGATGTGGAAGCAGAAGGTGTTCCCTGTGTTCTGCAGGGTGGAGGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp GATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGTCTGTCACCCTGGGCTaGCAGGACACAAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: DLEVQGCILGGFPWHGWSSVTLG*QDTSLS
Trigger: GGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAGA...CGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GCCCTGGCTGACTGTGGCATCGAGGATGGCTTGCATGTTCAGCTTCTCCAGGTTTCCAGGTTCTCATGCTaGTGGTTCCACCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ALADCGIEDGLHVQLLQVSRFSC*WFHLPF
Trigger: GAAGGGCAGGTGGAACCAGCAGCATGAGAACCTGGA...AACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CCA 90 bp CAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGTAGATGGGGAAGGTCTCCTCCACCAGTGTTaGGACCTTCCCATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QEVDDGGLVVHHHVDGEGLLHQC*DLPMGD
Trigger: GTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG...ACCTTCCCCATCTACATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CCA 90 bp GCCCTGGCTGACTGTGGCATCGAGGATGGCTTGCATGTTCAGCTTCTCCAGGTTATGGGGAAGGTGTTCTaGGGCTTGAAGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ALADCGIEDGLHVQLLQVMGKVF*GLKSST
Trigger: GGTGGAGGACTTCAAGCCCCAGAACACCTTCCCCAT...AACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CCA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGTCACACACCTCCTTGTaGAAGAACACTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWSHTSL*KNTVSK
Trigger: CTTGGAGACAGTGTTCTTCCACAAGGAGGTGTGTGA...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp AGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTTCAGTTAGGGTCAGATaGGCCAGGAAACTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RLGLRQRLDRDLEVQGCISVRVR*ARKLCK
Trigger: CTTGCAGAGTTTCCTGGCCCATCTGACCCTAACTGA...AATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp AGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGCTGGAGCTGGTGCTTaGCAATTGCCTGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: RGWTVILRFRGAFWVDSLAGAGA*QLPATC
Trigger: GCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGC...AAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAATACCACTCATTCTaGCATCGTGAGCAGCGCTTA +
Preference number: 4 (lower is better)
Translates to: SPLRRLGLRQRLDRDLEVQYHSF*HREQRL
Trigger: TAAGCGCTGCTCACGATGCCAGAATGAGTGGTATTG...AACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
3UTR CAA 72 bp CTATGCTCCAGCAGTTCCACCAGGAGGCAGGGCAGGTaGTGTGTGCTAAGCATACGGCTCAAGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LCSSSSTRRQGR*CVLSIRLKVLR
Trigger: TCTCAGCACCTTGAGCCGTATGCTTAGCACACACAACCTGCCCTGCCTCCTGGTGGAACTGCTGGAGCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp GGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCATGCTTGGCAATTGCCTaGCACTTGCCTCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GRKSRAFTWGEEEGDRSACLAIA*HLPLFS
Trigger: AGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCA...TGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp AGTACTGAGAGGGCCTTCAGTGCAATCTCAAATTCCATCAGCTCTGCCTGCTTCGCTGCTGGTTCCACCTaGCCTTCGGAGCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: STERAFSAISNSISSACFAAGST*PSEPIS
Trigger: CGAGATGGGCTCCGAAGGGCAGGTGGAACCAGCAGC...GAAGCAGGCAGAGCTGATGGAATTTGAGATTGCACTGAAGGCCCTCTCAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp CTTCTGCTTCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTTGGGACCTTTCCAGGTTCTCATGCTaGTGGTTCCACCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLLPHLHCDQLLHQCWDLSRFSC*WFHLPF
Trigger: GAAGGGCAGGTGGAACCAGCAGCATGAGAACCTGGA...AAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CCA 90 bp CACACCTCCTTGTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGCTCCTCCACCAGTGTTaGGACCTTCCCATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HTSLWKNTVSKRLMMEASLLHQC*DLPMGD
Trigger: GTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG...CGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCACAAGGAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR CCA 90 bp AGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGCTTTACTCCCAGTGCTTGACTTaGCACTCCCTGCAGCAATAC +
Preference number: 4 (lower is better)
Translates to: SLEPSLGVRRREIGQQLYSQCLT*HSLQQY
Trigger: GTATTGCTGCAGGGAGTGCCAAGTCAAGCACTGGGA...GTAAAGCTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGTTCAGGGGTGCATTCTaGGTGGATTCCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: DLEVQGCILGGFPWHGWSFRGAF*VDSLGM
Trigger: CATGCCAAGGGAATCCACCCAGAATGCACCCCTGAA...CGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp TTCTGCTTCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTTGGGACCTTCAGGTTCTCATGCTGCTaGTTCCACCTGCCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: FCFHISTAISSSTSVGTFRFSCC*FHLPFG
Trigger: TCCGAAGGGCAGGTGGAACCAGCAGCATGAGAACCT...GAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR TCA 90 bp TCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTTGGGACCTTCCCATGGGTGTCCACACAGTCTGTaGTGTAGCGTAGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: STSPLRSAPPPVLGPSHGCPHSL*CSVVLR
Trigger: TCTCAGTACTACGCTACATCACAGACTGTGTGGACA...CCCATGGGAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp CTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGTAGATGGGGAAGCATCGAGGATGGCTTaGATGTTCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQEVDDGGLVVHHHVDGEASRMA*MFSFSR
Trigger: CCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGC...TTCCCCATCTACATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR GCA 90 bp AGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTCCATGCTTTTCCCAGTaGTTGACTTGGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGWTVILRFRGAFWVDSLPCFSQ*LTWHSL
Trigger: CAGGGAGTGCCAAGTCAAGCACTGGGAAAAGCATGG...AAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR GCA 90 bp GACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCACACAAGTCTTTCCATaGTTTTCCCAGTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: DWGSGRGWTVILRFRGAFTQVFP*FSQCLT
Trigger: AGTCAAGCACTGGGAAAAGCATGGAAAGACTTGTGT...GAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CCA 90 bp GGCAGGTTGTGTGTGCTAAGCATACGGCTCAAGGTGCTGAGAGAGAGGCTGTCCCTGTGGCATCGAGGATaGCTTGCATGTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRLCVLSIRLKVLRERLSLWHRG*LACSAS
Trigger: AGAAGCTGAACATGCAAGCCATCCTCGATGCCACAG...GGACAGCCTCTCTCTCAGCACCTTGAGCCGTATGCTTAGCACACACAACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR CCA 90 bp AGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGAGGAACCAGCACACTaGGTGCAGACGTTGAATTCT +
Preference number: 4 (lower is better)
Translates to: RGWTVILRFRGAFWVDSLEEPAH*VQTLNS
Trigger: AGAATTCAACGTCTGCACCCAGTGTGCTGGTTCCTC...AAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360165.7
CDS-3UTR CCA 90 bp GCCCTGGCTGACTGTGGCATCGAGGATGGCTTGCATGTTCAGCTTCTCCAGGTTTTCTGCAGCTCCTTGTaGAAGAACACTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ALADCGIEDGLHVQLLQVFCSSL*KNTVSK
Trigger: CTTGGAGACAGTGTTCTTCCACAAGGAGCTGCAGAA...AACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp CGTAGTACTGAGAGGGCCTTCAGTGCAATCTCAAATTCCATCAGCTCTGCCTGCAGCTCTGCCTGCTTCTaGAGCTCCTTGTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RSTERAFSAISNSISSACSSACF*SSLWKN
Trigger: GTTCTTCCACAAGGAGCTGCAGAAGCAGGCAGAGCT...GCAGGCAGAGCTGATGGAATTTGAGATTGCACTGAAGGCCCTCTCAGTACTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS-3UTR GCA 90 bp CTACCAAGTCCAAGACAGTGTCTTCTGCTGACTCACACACCTCCTTGTGGAAGAACAGGGAACACCTTCTaGTTCCACATCTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: LPSPRQCLLLTHTPPCGRTGNTF*FHISTA
Trigger: CGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGT...TCTTCCACAAGGAGGTGTGTGAGTCAGCAGAAGACACTGTCTTGGACTTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS GCA 90 bp GCTGCTGGTTCCACCCTTCGGAGCCCATCTCGCGTAGCGGGAAGCTaGGCAGACCCCGCACCAGCACTTCAGCTTCCCCGGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: AAGSTLRSPSRVAGS*ADPAPALQLPRAAA
Trigger: TGCTGCTGCCCGGGGAAGCTGAAGTGCTGGTGCGGGGTCTGCGCAGCTTCCCGCTACGCGAGATGGGCTCCGAAGGGTGGAACCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000468182.1
CDS GCA 90 bp CTGGTTCCACCTGCCCTTCGGAGCCCATCTCGCGTAGCGGGAAGCTaGGCAGACCCCGCACCAGCACTTCAGCTTCCCCGGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LVPPALRSPSRVAGS*ADPAPALQLPRAAA
Trigger: TGCTGCTGCCCGGGGAAGCTGAAGTGCTGGTGCGGGGTCTGCGCAGCTTCCCGCTACGCGAGATGGGCTCCGAAGGGCAGGTGGAACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CAA 90 bp CTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCTCTGGGACAGGACAGTaGCGGGACGGTTGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: LHCGDWGSGRGWTVILRFSGTGQ*RDGWGA
Trigger: CGCTCCCCAACCGTCCCGCAACTGTCCTGTCCCAGA...GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCATGCAAGTGGGCCAGGTaGGGCAGCTGGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: GRGSPHPALALLVRFAEACKWAR*GSWSSS
Trigger: ACTGCTGGACCAGCTGCCCAACCTGGCCCACTTGCA...TGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS TCA 90 bp CAGCCCACCTTCGCGCCTGCAGCCGCAGGTCCTGCTCTGAGGGGCTaGACACATGCTGGAGCTGGTGCTTGGCAATTGCCTGCCACTTGC +
Preference number: 5 (lower is better)
Translates to: QPTFAPAAAGPALRG*THAGAGAWQLPATC
Trigger: GCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCAGGCGCGAAGGTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 90 bp TGCTCAGCTTTTGCTGCTCTGAGGGGGCCACAGTATGCCAACGGCTaGCCTCGAACTGCTGCAGCTTGCCTCCTTCCCGCCGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CSAFAALRGPQYANG*PRTAAACLLPAGSR
Trigger: CCTGGAGCCGGCGGGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000442887.1
CDS-3UTR CAA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGACAGTTGCGGGACGGTaGGGGAGCGTCAGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWTVAGR*GSVSSR
Trigger: GCGAGAACTGACGCTCCCCAACCGTCCCGCAACTGT...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACTGTGGCATCACAGTTGCGGGACGGTaGGGGAGCGTCAGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: PMGDQQLLNGLALADCGITVAGR*GSVSSR
Trigger: GCGAGAACTGACGCTCCCCAACCGTCCCGCAACTGT...GATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR CAA 90 bp GCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCTCTGGGACAGGACAGTaGCGGGACGGTTGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: AFWVDSLGMGGRPSATAASGTGQ*RDGWGA
Trigger: CGCTCCCCAACCGTCCCGCAACTGTCCTGTCCCAGA...GGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCCAGGGCGATCCACACTaGCCCGTCCAACTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SVSSFTARSALHCGDWGSQGDPH*PVQLAQ
Trigger: CTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCTG...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATCTGGGTGGATTCCCTaGGCATGGGTGGTCGGCCCT +
Preference number: 5 (lower is better)
Translates to: GDWGSGRGWTVILRFRGASGWIP*AWVVGP
Trigger: AGGGCCGACCACCCATGCCAAGGGAATCCACCCAGA...TGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp ACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTGCTGAAGCAACACACTaGGCCTACCCACTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TVLEEEGPHIRPWPSWSGAEATH*AYPLGG
Trigger: CCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGC...ACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS TCA 90 bp GTAGGTCTCAGCCCACCTTCGCGCCTGCAGCCGCAGGTCCTGCTCTaGGGGGCTGAACACATGCTGGAGCTGGTGCTTGGCAATTGCCTG +
Preference number: 5 (lower is better)
Translates to: VGLSPPSRLQPQVLL*GAEHMLELVLGNCL
Trigger: CAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCAGGCGCGAAGGTGGGCTGAGACCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS-3UTR CAA 90 bp AGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACAGGGCGATCCACACTaGCCCGTCCAACTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: RGSPHPALALLVRFAEATQGDPH*PVQLAQ
Trigger: CTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCTG...TGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGAGGAAGGCCCGAAGCTaGAGTAGCCGTCCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: EEGDRSAALPPALLSTAERKARS*SSRPLA
Trigger: TGCCAAGGGACGGCTACTCAAGCTTCGGGCCTTCCT...CTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGAAGGCCCGAAGCTaGAGTAGCCGTCCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LHCGDWGSGRGWTVILRFRKARS*SSRPLA
Trigger: TGCCAAGGGACGGCTACTCAAGCTTCGGGCCTTCCT...GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGCAATTGCCTGCCACTaGCCTCTGTTTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: LYRPLCSPLRRLGLRQRLAIACH*PLFSRS
Trigger: GGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGC...CAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp TACCCACTGGGTGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGTCTGGGTGGATTCCCTaGGCATGGGTGGTCGGCCCT +
Preference number: 5 (lower is better)
Translates to: YPLGGAGSLEPSLGVRRRSGWIP*AWVVGP
Trigger: AGGGCCGACCACCCATGCCAAGGGAATCCACCCAGA...CCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCACCCAGTGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGGGCTGGACCGTGATCTaGAGGTTCAGGGGTGCATTC +
Preference number: 5 (lower is better)
Translates to: EEEGPHIRPWPSWSGLLKGWTVI*RFRGAF
Trigger: GAATGCACCCCTGAACCTCAAGATCACGGTCCAGCC...CTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp TCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGGGGCTCCCCCTCCTGGTCCGGTTaGCTGAAGCAACACACTTGG +
Preference number: 5 (lower is better)
Translates to: SVSSFTARSALHCGDWGSPSWSG*LKQHTW
Trigger: CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGG...GGAGCCCCAGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp AGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAACAGTTGCGGGACGGTaGGGGAGCGTCAGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: RFRGAFWVDSLGMGGRPSTVAGR*GSVSSR
Trigger: GCGAGAACTGACGCTCCCCAACCGTCCCGCAACTGT...TGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAAAAGGTGTTCTGGGGCTaGAAGTCCTCCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: EEGPHIRPWPSWSGLLKQKVFWG*KSSTLQ
Trigger: CTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCTT...TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACTGTCTCCAAGAGGTaGATGATGGAGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GRGSPHPALALLVRFAEATVSKR*MMEASW
Trigger: CCACGAGGCCTCCATCATCAACCTCTTGGAGACAGT...TGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCGGGCTTAGCAGCAGGTaGTACAGGGCGATCCACACT +
Preference number: 5 (lower is better)
Translates to: ASFTVLEEEGPHIRPWPSGLSSR*YRAIHT
Trigger: AGTGTGGATCGCCCTGTACAACCTGCTGCTAAGCCC...GGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAAGGGCTTAGCAGCAGGTaGTACAGGGCGATCCACACT +
Preference number: 5 (lower is better)
Translates to: EEGPHIRPWPSWSGLLKQGLSSR*YRAIHT
Trigger: AGTGTGGATCGCCCTGTACAACCTGCTGCTAAGCCC...TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp AGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTTGCAAGTGGGCCAGGTaGGGCAGCTGGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: RLGLRQRLDRDLEVQGCICKWAR*GSWSSS
Trigger: ACTGCTGGACCAGCTGCCCAACCTGGCCCACTTGCA...AATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCGCAATTGCCTGCCACTaGCCTCTGTTTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: RRLGLRQRLDRDLEVQGCAIACH*PLFSRS
Trigger: GGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGC...GCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAACTGCAGCCCTCATTaGGCTCTGTCACCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LHCGDWGSGRGWTVILRFNCSPH*ALSPWA
Trigger: AGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGTT...GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCGGCTGGACCGTGATCTaGAGGTTCAGGGGTGCATTC +
Preference number: 5 (lower is better)
Translates to: GQLYCARGRGSPHPALALGWTVI*RFRGAF
Trigger: GAATGCACCCCTGAACCTCAAGATCACGGTCCAGCC...GAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS CCA 90 bp GTCAGATGGGCCAGGAAACTCTGCAAGTGGGCCAGGTTGGGCAGCTaGTCCAGCAGTGTGTCTGTGAGGAAGGCCCGAAGCTGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: VRWARKLCKWARLGS*SSSVSVRKARSCKG
Trigger: ACCCTTGCAGCTTCGGGCCTTCCTCACAGACACACTGCTGGACCAGCTGCCCAACCTGGCCCACTTGCAGAGTTTCCTGGCCCATCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475688.1
CDS-3UTR CAA 90 bp GAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAAGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: EEGPHIRPWPSWSGLLKQGIEDG*HVQLLQ
Trigger: CTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCC...TTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGGACCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGAAGGTGTTCTGGGGCTaGAAGTCCTCCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GSGRGWTVILRFRGAFWVKVFWG*KSSTLQ
Trigger: CTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCTT...CACCCAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CACCAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCAAGGTGTTCTGGGGCTaGAAGTCCTCCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: HQCWDLPMGDQQLLNGLAKVFWG*KSSTLQ
Trigger: CTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCTT...GGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CAA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACGCTGGTGCTTGGCAATaGCCTGCCACTTGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: HPALALLVRFAEATHLAYAGAWQ*PATCLC
Trigger: ACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGC...GTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCTGCTGGAGCTGGTGCTaGGCAATTGCCTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: AFWVDSLGMGGRPSATAACWSWC*AIACHL
Trigger: CAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCA...GGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCAGGGGTGCATTCTGTGCTGGAGCTGGTGCTaGGCAATTGCCTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: LGLRQRLDRDLEVQGCILCWSWC*AIACHL
Trigger: CAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCA...CAGAATGCACCCCTGAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CCCCACATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGTGCTTTTCCCAGTGCTaGACTTGGCACTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PHIRPWPSWSGLLKQHTWCFSQC*TWHSLQ
Trigger: CTGCAGGGAGTGCCAAGTCAAGCACTGGGAAAAGCA...CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp AGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCTGAAGCAACACACTaGGCCTACCCACTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RFRGAFWVDSLGMGGRPSAEATH*AYPLGG
Trigger: CCCACCCAGTGGGTAGGCCAAGTGTGTTGCTTCAGC...TGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS GCA 90 bp TACAGGGCGATCCACACTTGCCCGTCCAACTTGCTCAGCTTTTGCTaGTCTGAGGGGGCCACAGTATGCCAACGGCTGCCCTCGAACTGC +
Preference number: 5 (lower is better)
Translates to: YRAIHTCPSNLLSFC*SEGATVCQRLPSNC
Trigger: GCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS GCA 90 bp AGCCGCAGGTCCTGCTCTGAGGGGCTGAACACATGCTGGAGCTGGTaGTTGGCAATTGCCTGCCACTTGCCTCTGTTTTCTCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRRSCSEGLNTCWSW*LAIACHLPLFSRSS
Trigger: GCTGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 90 bp ATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTaGAGCCCTCATTTGGCTCTGTCACCCTGGGCTGCCAGGACACAA +
Preference number: 5 (lower is better)
Translates to: ILGGFPWHGWSALSN*SPHLALSPWAARTQ
Trigger: TTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 90 bp GTCAGATGGGCCAGGAAACTCTGCAAGTGGGCCAGGTTGGGCAGCTaGTCCAGCAGTGTGTCTGTGAGGAAGGCCCGAAGCTTGAGTAGC +
Preference number: 5 (lower is better)
Translates to: VRWARKLCKWARLGS*SSSVSVRKARSLSS
Trigger: GCTACTCAAGCTTCGGGCCTTCCTCACAGACACACTGCTGGACCAGCTGCCCAACCTGGCCCACTTGCAGAGTTTCCTGGCCCATCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
CDS CCA 90 bp TGCAGCCGCAGGTCCTGCTCTGAGGGGCTGAACACATGCTGGAGCTaGTGCTTGGCAATTGCCTGCCACTTGCCTCTGTTTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: CSRRSCSEGLNTCWS*CLAIACHLPLFSRS
Trigger: GGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 90 bp TCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCCTCATTTaGCTCTGTCACCCTGGGCTGCCAGGACACAAGTCTTTCCATGCT +
Preference number: 5 (lower is better)
Translates to: SLGMGGRPSATAALI*LCHPGLPGHKSFHA
Trigger: AGCATGGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 90 bp CTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTaGTCGGCCCTCAGCAACTGCAGCCCTCATTTGGCTCTGTCACCC +
Preference number: 5 (lower is better)
Translates to: LEVQGCILGGFPWHG*SALSNCSPHLALSP
Trigger: GGGTGACAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 90 bp GCCCTCGAACTGCTGCAGCTTGCCTGGGGAGAGGAACCAGCACACTaGGTGCAGACGTTGAATTCTCTTCAAGTGAGCCAGCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: ALELLQLAWGEEPAH*VQTLNSLQVSQLWG
Trigger: CCCCCACAGCTGGCTCACTTGAAGAGAATTCAACGTCTGCACCCAGTGTGCTGGTTCCTCTCCCCAGGCAAGCTGCAGCAGTTCGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360165.7
ENST00000475688.1
CDS-3UTR CAA 90 bp TACCCACTGGGTGGGGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: YPLGGAGSLEPSLGVRRRGIEDG*HVQLLQ
Trigger: CTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCC...CCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCCCCACCCAGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCACTGTCTCCAAGAGGTaGATGATGGAGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: AFWVDSLGMGGRPSATAATVSKR*MMEASW
Trigger: CCACGAGGCCTCCATCATCAACCTCTTGGAGACAGT...GGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GGCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAAGGAGGCAGGGCAGGTaGTGTGTGCTAAGCATACGG +
Preference number: 5 (lower is better)
Translates to: GRKSRAFTWGEEEGDRSARRQGR*CVLSIR
Trigger: CCGTATGCTTAGCACACACAACCTGCCCTGCCTCCT...TGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231749.8
CDS-3UTR CAA 90 bp GCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGCCCTCCACTTGCCCGTCCAACTaGCTCAGCTTTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ASFTVLEEEGPHIRPWPSTCPSN*LSFCCS
Trigger: AGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGT...GGAGGGCCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTCTTGAGTAGCCGTCCCTaGGCAAAACTTGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LHCGDWGSGRGWTVILRFLSSRP*AKLVRQ
Trigger: CTGCCTCACAAGTTTTGCCAAGGGACGGCTACTCAA...GAACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp AGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAAACTGCAGCCCTCATTaGGCTCTGTCACCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RFRGAFWVDSLGMGGRPSNCSPH*ALSPWA
Trigger: AGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGTT...TGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGCCCTCCTGGTCCGGTTaGCTGAAGCAACACACTTGG +
Preference number: 5 (lower is better)
Translates to: AGSLEPSLGVRRREIGQQPSWSG*LKQHTW
Trigger: CCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGG...CTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp TGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGCTCGCCCTGGCTGACTGCTTCTGCAGCTCCTaGTGGAAGAACACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: WDLPMGDQQLLNGLALADCFCSS*WKNTVS
Trigger: GGAGACAGTGTTCTTCCACAAGGAGCTGCAGAAGCA...GTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS GCA 90 bp TTGTACAGGGCGATCCACACTTGCCCGTCCAACTTGCTCAGCTTTTaGTGCTCTGAGGGGGCCACAGTATGCCAACGGCTGCCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LYRAIHTCPSNLLSF*CSEGATVCQRLPSN
Trigger: GTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCTGTACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS CCA 90 bp GACCGTGATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTaGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCCTCATTTGGCT +
Preference number: 5 (lower is better)
Translates to: DRDLEVQGCILGGFP*HGWSALSNCSPHLA
Trigger: AGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATCACGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 90 bp GGCCACAGTATGCCAACGGCTGCCCTCGAACTGCTGCAGCTTGCCTaGGGAGAGGAACCAGCACACTGGGTGCAGACGTTGAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: GHSMPTAALELLQLA*GEEPAHWVQTLNSL
Trigger: AAGAGAATTCAACGTCTGCACCCAGTGTGCTGGTTCCTCTCCCCAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360165.7
ENST00000475688.1
CDS-3UTR CAA 90 bp CTCCTCCACCAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLHQCWDLPMGDQQLLNGGIEDG*HVQLLQ
Trigger: CTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCC...CCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CAA 90 bp GAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGGAGACTGACTCACACACCTCCTaGTGGAAGAACACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: EGDRSAALPPALLSTAETDSHTS*WKNTVS
Trigger: GGAGACAGTGTTCTTCCACAAGGAGGTGTGTGAGTC...AGTCTCCGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CTGGAGGCCAGCTTTACTGTGCTAGAGGAAGAGGGTCCCCACATCCGGCCCTGGGACTCACACACCTCCTaGTGGAAGAACACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LEASFTVLEEEGPHIRPWDSHTS*WKNTVS
Trigger: GGAGACAGTGTTCTTCCACAAGGAGGTGTGTGAGTC...CCAGGGCCGGATGTGGGGACCCTCTTCCTCTAGCACAGTAAAGCTGGCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCACTTGCCCGTCCAACTaGCTCAGCTTTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: EVQGCILGGFPWHGWSALTCPSN*LSFCCS
Trigger: AGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGT...GAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CATCCGGCCCTGGCCCTCCTGGTCCGGTTTGCTGAAGCAACACACTTGGCCTACTTGAGTAGCCGTCCCTaGGCAAAACTTGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HPALALLVRFAEATHLAYLSSRP*AKLVRQ
Trigger: CTGCCTCACAAGTTTTGCCAAGGGACGGCTACTCAA...GTAGGCCAAGTGTGTTGCTTCAGCAAACCGGACCAGGAGGGCCAGGGCCGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp TCTCCACTGCGGAGACTGGGGCTCCGGCAGAGGCTGGACCGTGATCTTGAGGTTTTCCCAGTGCTTGACTaGGCACTCCCTGCAGCAATA +
Preference number: 5 (lower is better)
Translates to: SPLRRLGLRQRLDRDLEVFPVLD*ALPAAI
Trigger: TATTGCTGCAGGGAGTGCCAAGTCAAGCACTGGGAA...AACCTCAAGATCACGGTCCAGCCTCTGCCGGAGCCCCAGTCTCCGCAGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp CAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTTCCCAGTGCTTGACTaGGCACTCCCTGCAGCAATA +
Preference number: 5 (lower is better)
Translates to: QGCILGGFPWHGWSALSNFPVLD*ALPAAI
Trigger: TATTGCTGCAGGGAGTGCCAAGTCAAGCACTGGGAA...GTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GCAGGAAGTCTCGAGCCTTCACTTGGGGTGAGGAGGAGGGAGATCGGTCAGCAGTGCTTTTCCCAGTGCTaGACTTGGCACTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AGSLEPSLGVRRREIGQQCFSQC*TWHSLQ
Trigger: CTGCAGGGAGTGCCAAGTCAAGCACTGGGAAAAGCA...CTGCTGACCGATCTCCCTCCTCCTCACCCCAAGTGAAGGCTCGAGACTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS-3UTR CAA 90 bp GAGGAGGAGGGAGATCGGTCAGCAGCTTTACCGCCCGCTCTGCTCTCCACTGCGCACTGGGTGCAGACGTaGAATTCTCTTCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: EEEGDRSAALPPALLSTAHWVQT*NSLQVS
Trigger: GCTCACTTGAAGAGAATTCAACGTCTGCACCCAGTG...CGCAGTGGAGAGCAGAGCGGGCGGTAAAGCTGCTGACCGATCTCCCTCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360165.7
CDS GCA 90 bp TTAGCAGCAGGTTGTACAGGGCGATCCACACTTGCCCGTCCAACTTaGTCAGCTTTTGCTGCTCTGAGGGGGCCACAGTATGCCAACGGC +
Preference number: 5 (lower is better)
Translates to: LAAGCTGRSTLARPT*SAFAALRGPQYANG
Trigger: GCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCTGTACAACCTGCTGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS CCA 90 bp AACACCAGGTCCTTCTTAGGAGGCTGGGTTTCAGTTAGGGTCAGATaGGCCAGGAAACTCTGCAAGTGGGCCAGGTTGGGCAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: NTRSFLGGWVSVRVR*ARKLCKWARLGSWS
Trigger: GGACCAGCTGCCCAACCTGGCCCACTTGCAGAGTTTCCTGGCCCATCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGACCTGGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
CDS CCA 90 bp TGGTCGGCCCTCAGCAACTGCAGCCCTCATTTGGCTCTGTCACCCTaGGCTGCCAGGACACAAGTCTTTCCATGCTTTTCCCAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: WSALSNCSPHLALSP*AARTQVFPCFSQCL
Trigger: CAAGCACTGGGAAAAGCATGGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS-3UTR CAA 90 bp CTCCTCCACCAGTGTTGGGACCTTCCCATGGGTGACCAGCAGCTCCTGAATGGGGACTCACACACCTCCTaGTGGAAGAACACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLHQCWDLPMGDQQLLNGDSHTS*WKNTVS
Trigger: GGAGACAGTGTTCTTCCACAAGGAGGTGTGTGAGTC...CCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACACTGGTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR CAA 90 bp GATCTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTGGTCGGCTGGTGCTTGGCAATaGCCTGCCACTTGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: DLEVQGCILGGFPWHGWSAGAWQ*PATCLC
Trigger: ACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGC...CGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS TCA 90 bp CTTGACTTGGCACTCCCTGCAGCAATACCACTCATTCTGGCATCGTaGGCAGCGCTTAGAAGCCTCTGCACTGCAGTAAGCACAGCGGGG +
Preference number: 5 (lower is better)
Translates to: LDLALPAAIPLILAS*AALRSLCTAVSTAG
Trigger: CCCCGCTGTGCTTACTGCAGTGCAGAGGCTTCTAAGCGCTGCTCACGATGCCAGAATGAGTGGTATTGCTGCAGGGAGTGCCAAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 90 bp TCTGAGGGGCTGAACACATGCTGGAGCTGGTGCTTGGCAATTGCCTaGCACTTGCCTCTGTTTTCTCGCTCCAGCCGCTCCCAGATTTCT +
Preference number: 5 (lower is better)
Translates to: SEGLNTCWSWCLAIA*HLPLFSRSSRSQIS
Trigger: AGAAATCTGGGAGCGGCTGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 90 bp GGCCCTCAGCAACTGCAGCCCTCATTTGGCTCTGTCACCCTGGGCTaGCAGGACACAAGTCTTTCCATGCTTTTCCCAGTGCTTGACTTG +
Preference number: 5 (lower is better)
Translates to: GPQQLQPSFGSVTLG*QDTSLSMLFPVLDL
Trigger: CAAGTCAAGCACTGGGAAAAGCATGGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS-3UTR CAA 90 bp CTTCTGCTTCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTTGGGACCTTGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLLPHLHCDQLLHQCWDLGIEDG*HVQLLQ
Trigger: CTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCC...AAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CAA 90 bp ACCTCCTTGTGGAAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGAAGGTGTTCTGGGGCTaGAAGTCCTCCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TSLWKNTVSKRLMMEASWKVFWG*KSSTLQ
Trigger: CTGCAGGGTGGAGGACTTCAAGCCCCAGAACACCTT...CCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTTCCACAAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431869.1
CDS-3UTR CAA 90 bp CTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGTAGATGGGGAAACTGTCTCCAAGAGGTaGATGATGGAGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: LQEVDDGGLVVHHHVDGETVSKR*MMEASW
Trigger: CCACGAGGCCTCCATCATCAACCTCTTGGAGACAGT...TTCCCCATCTACATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS-3UTR CAA 90 bp AAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGAGGAGGCAGGGCAGGTaGTGTGTGCTAAGCATACGG +
Preference number: 5 (lower is better)
Translates to: KNTVSKRLMMEASWCTTMRRQGR*CVLSIR
Trigger: CCGTATGCTTAGCACACACAACCTGCCCTGCCTCCT...CATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443080.5
CDS GCA 90 bp CATTTGGCTCTGTCACCCTGGGCTGCCAGGACACAAGTCTTTCCATaGTTTTCCCAGTGCTTGACTTGGCACTCCCTGCAGCAATACCAC +
Preference number: 5 (lower is better)
Translates to: HLALSPWAARTQVFP*FSQCLTWHSLQQYH
Trigger: GTGGTATTGCTGCAGGGAGTGCCAAGTCAAGCACTGGGAAAAGCATGGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS-3UTR CAA 90 bp AAGAACACTGTCTCCAAGAGGTTGATGATGGAGGCCTCGTGGTGCACCACCATGACTGTCTCCAAGAGGTaGATGATGGAGGCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: KNTVSKRLMMEASWCTTMTVSKR*MMEASW
Trigger: CCACGAGGCCTCCATCATCAACCTCTTGGAGACAGT...CATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTTGGAGACAGTGTTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS CCA 90 bp CAGATTTCTGGGATCTGTTCCAACACCAGGTCCTTCTTAGGAGGCTaGGTTTCAGTTAGGGTCAGATGGGCCAGGAAACTCTGCAAGTGG +
Preference number: 5 (lower is better)
Translates to: QISGICSNTRSFLGG*VSVRVRWARKLCKW
Trigger: CCACTTGCAGAGTTTCCTGGCCCATCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGACCTGGTGTTGGAACAGATCCCAGAAATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
CDS GCA 72 bp CCTGCCCTTCGGAGCCCATCTCGCGTAGCGGGAAGCTaGGCAGACCCCGCACCAGCACTTCAGCTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: PALRSPSRVAGS*ADPAPALQLPR
Trigger: CCGGGGAAGCTGAAGTGCTGGTGCGGGGTCTGCGCAGCTTCCCGCTACGCGAGATGGGCTCCGAAGGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS GCA 72 bp TCCACCCTTCGGAGCCCATCTCGCGTAGCGGGAAGCTaGGCAGACCCCGCACCAGCACTTCAGCTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: STLRSPSRVAGS*ADPAPALQLPR
Trigger: CCGGGGAAGCTGAAGTGCTGGTGCGGGGTCTGCGCAGCTTCCCGCTACGCGAGATGGGCTCCGAAGGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000468182.1
CDS GCA 72 bp GAGGGGGCCACAGTATGCCAACGGCTGCCCTCGAACTaGTGCAGCTTGCCTCCTTCCCGCCGGCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: EGATVCQRLPSN*CSLPPSRRLQG
Trigger: TCCCTGGAGCCGGCGGGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000442887.1
CDS TCA 72 bp AGCCCACCTTCGCGCCTGCAGCCGCAGGTCCTGCTCTaGGGGGCTGAACACATGCTGGAGCTGGTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: SPPSRLQPQVLL*GAEHMLELVLG
Trigger: GCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCAGGCGCGAAGGTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 72 bp GTCTCAGCCCACCTTCGCGCCTGCAGCCGCAGGTCCTaGTCTGAGGGGCTGAACACATGCTGGAGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: VSAHLRACSRRS*SEGLNTCWSWC
Trigger: GCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCAGGCGCGAAGGTGGGCTGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CAA 72 bp CGGACCCCGACGGTGCCAAAGTCTGGGACAGGACAGTaGCGGGACGGTTGGGGAGCGTCAGTTCTCGCAGCC +
Preference number: 6 (lower is better)
Translates to: RTPTVPKSGTGQ*RDGWGASVLAA
Trigger: GGCTGCGAGAACTGACGCTCCCCAACCGTCCCGCAACTGTCCTGTCCCAGACTTTGGCACCGTCGGGGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000431869.1
ENST00000442887.1
CDS GCA 72 bp GGGGCCACAGTATGCCAACGGCTGCCCTCGAACTGCTaGAGCTTGCCTGGGGAGAGGAACCAGCACACTGGG +
Preference number: 6 (lower is better)
Translates to: GATVCQRLPSNC*SLPGERNQHTG
Trigger: CCCAGTGTGCTGGTTCCTCTCCCCAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360165.7
ENST00000475688.1
CDS TCA 72 bp TGCCCAGGCTATAGGGCTGCTGACCCCAGAGCAGGGTaGGCCTCAGTAGTGGACACATGGGCCTGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: CPGYRAADPRAG*ASVVDTWAWPA
Trigger: AGCAGGCCAGGCCCATGTGTCCACTACTGAGGCTCACCCTGCTCTGGGGTCAGCAGCCCTATAGCCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475688.1
CDS GCA 72 bp TTTGCTGCTCTGAGGGGGCCACAGTATGCCAACGGCTaGCCTCGAACTGCTGCAGCTTGCCTCCTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: FAALRGPQYANG*PRTAAACLLPA
Trigger: GGCGGGAAGGAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000442887.1
CDS GCA 72 bp GGATTCCCTTGGCATGGGTGGTCGGCCCTCAGCAACTaGAGCCCTCATTTGGCTCTGTCACCCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GFPWHGWSALSN*SPHLALSPWAA
Trigger: GGCAGCCCAGGGTGACAGAGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 72 bp GATGCTGTCACATTCGGGGACGACGGACCCCGACGGTaGCAAAGTCTGGGACAGGACAGTTGCGGGACGGTT +
Preference number: 6 (lower is better)
Translates to: DAVTFGDDGPRR*QSLGQDSCGTV
Trigger: AACCGTCCCGCAACTGTCCTGTCCCAGACTTTGGCACCGTCGGGGTCCGTCGTCCCCGAATGTGACAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000431869.1
ENST00000442887.1
CDS GCA 72 bp TTTGCTGCTCTGAGGGGGCCACAGTATGCCAACGGCTaGCCTCGAACTGCTGCAGCTTGCCTGGGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: FAALRGPQYANG*PRTAAACLGRG
Trigger: TCCTCTCCCCAGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360165.7
ENST00000475688.1
CDS CCA 72 bp GCCAGGAAACTCTGCAAGTGGGCCAGGTTGGGCAGCTaGTCCAGCAGTGTGTCTGTGAGGAAGGCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: ARKLCKWARLGS*SSSVSVRKARS
Trigger: GCTTCGGGCCTTCCTCACAGACACACTGCTGGACCAGCTGCCCAACCTGGCCCACTTGCAGAGTTTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS CAA 72 bp GGTGCCAAAGTCTGGGACAGGACAGTTGCGGGACGGTaGGGGAGCGTCAGTTCTCGCAGCCATGGAAACGGG +
Preference number: 6 (lower is better)
Translates to: GAKVWDRTVAGR*GSVSSRSHGNG
Trigger: CCCGTTTCCATGGCTGCGAGAACTGACGCTCCCCAACCGTCCCGCAACTGTCCTGTCCCAGACTTTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS CAA 90 bp CGCAGGTCCTGCTCTGAGGGGCTGAACACATGCTGGAGCTGGTGCTaGGCAATTGCCTGCCACTTGCCTCTGTTTTCTCGCTCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RRSCSEGLNTCWSWC*AIACHLPLFSRSSR
Trigger: GCGGCTGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 72 bp GTGCCAAAGTCTGGGACAGGACAGTTGCGGGACGGTTaGGGAGCGTCAGTTCTCGCAGCCATGGAAACGGGT +
Preference number: 6 (lower is better)
Translates to: VPKSGTGQLRDG*GASVLAAMETG
Trigger: ACCCGTTTCCATGGCTGCGAGAACTGACGCTCCCCAACCGTCCCGCAACTGTCCTGTCCCAGACTTTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231749.8
ENST00000360165.7
CDS CCA 72 bp AGCCGCAGGTCCTGCTCTGAGGGGCTGAACACATGCTaGAGCTGGTGCTTGGCAATTGCCTGCCACTTGCCT +
Preference number: 6 (lower is better)
Translates to: SRRSCSEGLNTC*SWCLAIACHLP
Trigger: AGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 72 bp CAGGGGTGCATTCTGGGTGGATTCCCTTGGCATGGGTaGTCGGCCCTCAGCAACTGCAGCCCTCATTTGGCT +
Preference number: 6 (lower is better)
Translates to: QGCILGGFPWHG*SALSNCSPHLA
Trigger: AGCCAAATGAGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 72 bp CTTGAGGTTCAGGGGTGCATTCTGGGTGGATTCCCTTaGCATGGGTGGTCGGCCCTCAGCAACTGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: LEVQGCILGGFP*HGWSALSNCSP
Trigger: AGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CAA 90 bp TCAGTTAGGGTCAGATGGGCCAGGAAACTCTGCAAGTGGGCCAGGTaGGGCAGCTGGTCCAGCAGTGTGTCTGTGAGGAAGGCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: SVRVRWARKLCKWAR*GSWSSSVSVRKARS
Trigger: GCTTCGGGCCTTCCTCACAGACACACTGCTGGACCAGCTGCCCAACCTGGCCCACTTGCAGAGTTTCCTGGCCCATCTGACCCTAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS GCA 72 bp GGCTCGCCCTGGCTGACTGTGGCATCGAGGATGGCTTaGATGTTCAGCTTCTCCAGGTTCTCATGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GSPWLTVASRMA*MFSFSRFSCCW
Trigger: CCAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGCGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000431869.1
ENST00000442887.1
ENST00000443080.5
ENST00000468182.1
CDS GCA 72 bp TTGCTCAGCTTTTGCTGCTCTGAGGGGGCCACAGTATaGCAACGGCTGCCCTCGAACTGCTGCAGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: LLSFCCSEGATV*QRLPSNCCSLP
Trigger: AGGCAAGCTGCAGCAGTTCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS GCA 72 bp ATCCACACTTGCCCGTCCAACTTGCTCAGCTTTTGCTaGTCTGAGGGGGCCACAGTATGCCAACGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: IHTCPSNLLSFC*SEGATVCQRLP
Trigger: GGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGTGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS GCA 72 bp GCGATCCACACTTGCCCGTCCAACTTGCTCAGCTTTTaGTGCTCTGAGGGGGCCACAGTATGCCAACGGCTG +
Preference number: 6 (lower is better)
Translates to: AIHTCPSNLLSF*CSEGATVCQRL
Trigger: CAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGTGTGGATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS CCA 72 bp GGTTCAGGGGTGCATTCTGGGTGGATTCCCTTGGCATaGGTGGTCGGCCCTCAGCAACTGCAGCCCTCATTT +
Preference number: 6 (lower is better)
Translates to: GSGVHSGWIPLA*VVGPQQLQPSF
Trigger: AAATGAGGGCTGCAGTTGCTGAGGGCCGACCACCCATGCCAAGGGAATCCACCCAGAATGCACCCCTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CAA 72 bp GGGCTCGCCCTGGCTGACTGTGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAGGTTCTCATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GLALADCGIEDG*HVQLLQVLMLL
Trigger: CAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000431869.1
ENST00000442887.1
ENST00000443080.5
ENST00000468182.1
CDS CAA 90 bp CTCCTGAATGGGCTCGCCCTGGCTGACTGTGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAGGTTCTCATGCTGCTGGTTCCACCC +
Preference number: 6 (lower is better)
Translates to: LLNGLALADCGIEDG*HVQLLQVLMLLVPP
Trigger: GGGTGGAACCAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000468182.1
CDS CAA 90 bp GGGCTGAACACATGCTGGAGCTGGTGCTTGGCAATTGCCTGCCACTaGCCTCTGTTTTCTCGCTCCAGCCGCTCCCAGATTTCTGGGATC +
Preference number: 6 (lower is better)
Translates to: GLNTCWSWCLAIACH*PLFSRSSRSQISGI
Trigger: GATCCCAGAAATCTGGGAGCGGCTGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CAA 90 bp CTCCTGAATGGGCTCGCCCTGGCTGACTGTGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAGGTTCTCATGCTGCTGGTTCCACCT +
Preference number: 6 (lower is better)
Translates to: LLNGLALADCGIEDG*HVQLLQVLMLLVPP
Trigger: AGGTGGAACCAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431869.1
ENST00000443080.5
CDS CAA 90 bp CTCCTGAATGGGCTCGCCCTGGCTGACTGTGGCATCGAGGATGGCTaGCATGTTCAGCTTCTCCAGGTTCTCATGCTGCTGGTTCCACCA +
Preference number: 6 (lower is better)
Translates to: LLNGLALADCGIEDG*HVQLLQVLMLLVPP
Trigger: TGGTGGAACCAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCATCCTCGATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442887.1
CDS CAA 90 bp CTCCAGGGACTATGCTCCAGCAGTTCCACCAGGAGGCAGGGCAGGTaGTGTGTGCTAAGCATACGGCTCAAGGTGCTGAGAGAGAGGCTA +
Preference number: 6 (lower is better)
Translates to: LQGLCSSSSTRRQGR*CVLSIRLKVLRERL
Trigger: TAGCCTCTCTCTCAGCACCTTGAGCCGTATGCTTAGCACACACAACCTGCCCTGCCTCCTGGTGGAACTGCTGGAGCATAGTCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475688.1
CDS GCA 72 bp CTGAACACATGCTGGAGCTGGTGCTTGGCAATTGCCTaGCACTTGCCTCTGTTTTCTCGCTCCAGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: LNTCWSWCLAIA*HLPLFSRSSRS
Trigger: GGAGCGGCTGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 72 bp ACCTTGGCTGAGGCATCCTGGTATCCTCAGTGGGCTTaGGGACAGGGTTTGTCTTCGTGTGTGCAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: TLAEASWYPQWA*GQGLSSCVQAA
Trigger: GGCAGCTTGCACACACGAAGACAAACCCTGTCCCCAAGCCCACTGAGGATACCAGGATGCCTCAGCCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475688.1
CDS GCA 72 bp AGGATGGCTTGCATGTTCAGCTTCTCCAGGTTCTCATaGTGCTGGTTCCACCCTTCGGAGCCCATCTCGCGT +
Preference number: 6 (lower is better)
Translates to: RMACMFSFSRFS*CWFHPSEPISR
Trigger: ACGCGAGATGGGCTCCGAAGGGTGGAACCAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000468182.1
CDS GCA 72 bp CACCACAGCCACTCTGGGCCACCAGCAGGGTCAGTTTaGGGTGGCAATAGTCTACCAAGTCCAAGACAGTGT +
Preference number: 6 (lower is better)
Translates to: HHSHSGPPAGSV*GGNSLPSPRQC
Trigger: ACACTGTCTTGGACTTGGTAGACTATTGCCACCGCAAACTGACCCTGCTGGTGGCCCAGAGTGGCTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000478269.5
CDS GCA 72 bp GGTTGTACAGGGCGATCCACACTTGCCCGTCCAACTTaGTCAGCTTTTGCTGCTCTGAGGGGGCCACAGTAT +
Preference number: 6 (lower is better)
Translates to: GCTGRSTLARPT*SAFAALRGPQY
Trigger: ATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGTGTGGATCGCCCTGTACAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000442887.1
ENST00000475688.1
CDS GCA 72 bp CTGTCACCCTGGGCTGCCAGGACACAAGTCTTTCCATaGTTTTCCCAGTGCTTGACTTGGCACTCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LSPWAARTQVFP*FSQCLTWHSLQ
Trigger: CTGCAGGGAGTGCCAAGTCAAGCACTGGGAAAAGCATGGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 72 bp AGGATGGCTTGCATGTTCAGCTTCTCCAGGTTCTCATaGTGCTGGTTCCACCAGCACTTCAGCTTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: RMACMFSFSRFS*CWFHQHFSFPG
Trigger: CCCGGGGAAGCTGAAGTGCTGGTGGAACCAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442887.1
CDS CCA 72 bp TCCTTCTTAGGAGGCTGGGTTTCAGTTAGGGTCAGATaGGCCAGGAAACTCTGCAAGTGGGCCAGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: SFLGGWVSVRVR*ARKLCKWARLG
Trigger: GCCCAACCTGGCCCACTTGCAGAGTTTCCTGGCCCATCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
CDS CCA 72 bp CTGCTGCAGCTTGCCTGGGGAGAGGAACCAGCACACTaGGTGCAGACGTTGAATTCTCTTCAAGTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: LLQLAWGEEPAH*VQTLNSLQVSQ
Trigger: CTGGCTCACTTGAAGAGAATTCAACGTCTGCACCCAGTGTGCTGGTTCCTCTCCCCAGGCAAGCTGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360165.7
ENST00000475688.1
CDS CAA 72 bp ACATGCTGGAGCTGGTGCTTGGCAATTGCCTGCCACTaGCCTCTGTTTTCTCGCTCCAGCCGCTCCCAGATT +
Preference number: 6 (lower is better)
Translates to: TCWSWCLAIACH*PLFSRSSRSQI
Trigger: AATCTGGGAGCGGCTGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CAA 72 bp TGCTCTGAGGGGCTGAACACATGCTGGAGCTGGTGCTaGGCAATTGCCTGCCACTTGCCTCTGTTTTCTCGC +
Preference number: 6 (lower is better)
Translates to: CSEGLNTCWSWC*AIACHLPLFSR
Trigger: GCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CAA 72 bp CCACTGCGATCAGCTCCTCCACCAGTGTTGGGACCTTaGAAGGGTAGGGTAAAGGACAGGGATGAGATGGGC +
Preference number: 6 (lower is better)
Translates to: PLRSAPPPVLGP*KGRVKDRDEMG
Trigger: GCCCATCTCATCCCTGTCCTTTACCCTACCCTTCAAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478269.5
CDS CAA 90 bp CCTTCTGCTTCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTaGGGACCTTTGAAGGGTAGGGTAAAGGACAGGGATGAGATGGGC +
Preference number: 6 (lower is better)
Translates to: PSASTSPLRSAPPPV*GPLKGRVKDRDEMG
Trigger: GCCCATCTCATCCCTGTCCTTTACCCTACCCTTCAAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478269.5
CDS TCA 72 bp GCACTCCCTGCAGCAATACCACTCATTCTGGCATCGTaGGCAGCGCTTAGAAGCCTCTGCACTGCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: ALPAAIPLILAS*AALRSLCTAVS
Trigger: GCTTACTGCAGTGCAGAGGCTTCTAAGCGCTGCTCACGATGCCAGAATGAGTGGTATTGCTGCAGGGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS TCA 72 bp GCTGGGAGACTGACCACTGCCTGTCCACACAGTCTGTaGTGTAGCGTAGTACTGAGAGGGCCTTCAGTGCAA +
Preference number: 6 (lower is better)
Translates to: AGRLTTACPHSL*CSVVLRGPSVQ
Trigger: TTGCACTGAAGGCCCTCTCAGTACTACGCTACATCACAGACTGTGTGGACAGGCAGTGGTCAGTCTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360165.7
CDS GCA 72 bp TCCTGCTCTGAGGGGCTGAACACATGCTGGAGCTGGTaGTTGGCAATTGCCTGCCACTTGCCTCTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: SCSEGLNTCWSW*LAIACHLPLFS
Trigger: AGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCACCAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS GCA 72 bp GTTCTAGGACCTACAGCTTTCTCCCTAATCAACTCATaGCCTGCACCCAGCCTGGTGTGCCAGAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: VLGPTAFSLINS*PAPSLVCQSPS
Trigger: GGAAGGACTCTGGCACACCAGGCTGGGTGCAGGGCATGAGTTGATTAGGGAGAAAGCTGTAGGTCCTAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468182.1
CDS CAA 90 bp TCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTTGGGACCTTaGAAGGGTAGGGTAAAGGACAGGGATGAGATGGGCCTACCTTTG +
Preference number: 6 (lower is better)
Translates to: STSPLRSAPPPVLGP*KGRVKDRDEMGLPL
Trigger: CAAAGGTAGGCCCATCTCATCCCTGTCCTTTACCCTACCCTTCAAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478269.5
CDS CCA 72 bp GGGATCTGTTCCAACACCAGGTCCTTCTTAGGAGGCTaGGTTTCAGTTAGGGTCAGATGGGCCAGGAAACTC +
Preference number: 6 (lower is better)
Translates to: GICSNTRSFLGG*VSVRVRWARKL
Trigger: GAGTTTCCTGGCCCATCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGACCTGGTGTTGGAACAGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
CDS CCA 72 bp TTGACTTGGCACTCCCTGCAGCAATACCACTCATTCTaGCATCGTGAGCAGCGCTTAGAAGCCTCTGCACTG +
Preference number: 6 (lower is better)
Translates to: LTWHSLQQYHSF*HREQRLEASAL
Trigger: CAGTGCAGAGGCTTCTAAGCGCTGCTCACGATGCCAGAATGAGTGGTATTGCTGCAGGGAGTGCCAAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231749.8
ENST00000360165.7
ENST00000475688.1
ENST00000490675.5
CDS CCA 72 bp CCGGCTCAGCTCAACCCTGATATCCCCAAACACTGCTaGGCCCCTAAACTATTCCAGACCCATGAGTATCCT +
Preference number: 6 (lower is better)
Translates to: PAQLNPDIPKHC*APKLFQTHEYP
Trigger: AGGATACTCATGGGTCTGGAATAGTTTAGGGGCCCAGCAGTGTTTGGGGATATCAGGGTTGAGCTGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478269.5
CDS CAA 72 bp TCCACATCTCCACTGCGATCAGCTCCTCCACCAGTGTaGGGACCTTTGAAGGGTAGGGTAAAGGACAGGGAT +
Preference number: 6 (lower is better)
Translates to: STSPLRSAPPPV*GPLKGRVKDRD
Trigger: ATCCCTGTCCTTTACCCTACCCTTCAAAGGTCCCAACACTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478269.5
CDS TCA 72 bp AATTCACAGATGCCTTTAGCATTTGGGCCTTCCCCTTaGAGCCTAAGCTGTTCTAGGACCTACAGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: NSQMPLAFGPSP*SLSCSRTYSFL
Trigger: GAGAAAGCTGTAGGTCCTAGAACAGCTTAGGCTTCAAGGGGAAGGCCCAAATGCTAAAGGCATCTGTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468182.1