RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMYM6 (Homo sapiens)

Ensembl gene IDs: ENSG00000163867

Ensembl transcript IDs: ENST00000317538.9, ENST00000357182.9, ENST00000373333.1, ENST00000415531.5, ENST00000460607.1, ENST00000471566.1, ENST00000472971.1, ENST00000493328.5

Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTaGACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGC +
Preference number: 1 (lower is better)
Translates to: FKNSHTYLHIVYGCF*TATAELSSCDSMAC
Trigger: GCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR-3UTR TCA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTGGCAGGTGGATCACTTaGGGTCAGGAGATAGAGACC +
Preference number: 2 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSGRWIT*GQEIET
Trigger: GGTCTCTATCTCCTGACCTCAAGTGATCCACCTGCC...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR-3UTR CCA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTGCAGGGGTAAGTAGCTaGTTGGCTAGAAGACTGAAA +
Preference number: 2 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSAGVSS*LARRLK
Trigger: TTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGC...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR CAA 90 bp AATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTaGTGCTGTTACATTATAAACTGGGCTTCTCATTACCTGCAGTCT +
Preference number: 2 (lower is better)
Translates to: NVPLASKGQAVSTSR*CCYIINWASHYLQS
Trigger: AGACTGCAGGTAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR-3UTR GCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTGTGACAGTATGGCCTaGAAAGCTGAAAATATTTAC +
Preference number: 2 (lower is better)
Translates to: KTATLICILSMAAFALQLCDSMA*KAENIY
Trigger: GTAAATATTTTCAGCTTTGCAGGCCATACTGTCACA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR-3UTR TCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCATTGTAAAGCAACAATaGCCCCACAAGGACATTAGA +
Preference number: 2 (lower is better)
Translates to: FKYLLCARPFANTVSLKSIVKQQ*PHKDIR
Trigger: TCTAATGTCCTTGTGGGGTCATTGTTGCTTTACAAT...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
3UTR GCA 72 bp AATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTaGTTAGATCTATCTTTTTCCAGCTGGGCACGTTGG +
Preference number: 3 (lower is better)
Translates to: NPPAASIYSYPS*LDLSFSSWARW
Trigger: CCAACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR CCA 72 bp TTTCCACCTACTCACAACCTTGCAGGGGTAAGTAGCTaGTTGGCTAGAAGACTGAAATGTTCCACTTGCTTC +
Preference number: 3 (lower is better)
Translates to: FPPTHNLAGVSS*LARRLKCSTCF
Trigger: GAAGCAAGTGGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGTAGGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR-3UTR CAA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGACTGAAATGTTCCACTaGCTTCTAAAGGCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: KTATLICILSMAAFALQLTEMFH*LLKAKL
Trigger: CAGCTTGGCCTTTAGAAGCAAGTGGAACATTTCAGT...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR-3UTR CAA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCAGCTCTTACTGTTTTTaGCCTGTAGTGACTATTAAC +
Preference number: 3 (lower is better)
Translates to: FKYLLCARPFANTVSLKSSSYCF*PVVTIN
Trigger: GTTAATAGTCACTACAGGCAAAAAACAGTAAGAGCT...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGTGGCAGGCAGGCAGGTaGAGAATGTCTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMWQAGR*RMSGDA
Trigger: TGCATCACCAGACATTCTTCACCTGCCTGCCTGCCA...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGTTGTGCAGGTTTTCTTaGGAGGAGGTGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMLCRFS*EEVAGR
Trigger: CCTGCCTGCCACCTCCTCCCAAGAAAACCTGCACAA...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGCAGAAGCTCCTGCTGTaGTACCACTGCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMQKLLL*YHCFAT
Trigger: TGTGGCAAAGCAGTGGTACCACAGCAGGAGCTTCTG...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR GCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGTTGTCCAGAAGCTCCTaGTGTGGTACCACTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMLSRSS*CGTTAL
Trigger: CAAAGCAGTGGTACCACAGCAGGAGCTTCTGGACAA...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR TCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGGATGCAAAAGAAAGCTaGAAGCCTGGGTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMDAKES*KPGFNC
Trigger: GCAGTTGAACCCAGGCTTTCAGCTTTCTTTTGCATC...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR GCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGGTGGTACCACTGCTTTaGCACATTCACCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMVVPLL*HIHHPK
Trigger: CTTTGGATGGTGAATGTGGCAAAGCAGTGGTACCAC...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGTTGGTAATGGATAGTTaGACACCTTCTGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMLVMDS*TPSVAS
Trigger: GGAGGCGACAGAAGGTGTCCAACTATCCATTACCAA...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGCCTGGGTTCAACTGCTaGGCAATAGGTCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMPGFNC*AIGLSL
Trigger: TAATGAGAGACCTATTGCCCAGCAGTTGAACCCAGG...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR TCA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGACAACCACTTGGCCCTaGGACAGGGGCACCGCCGAA +
Preference number: 4 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWTTTWP*DRGTAE
Trigger: TTCGGCGGTGCCCCTGTCTCAGGGCCAAGTGGTTGT...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTGCTAAGCCCTGGTATATTGGGCCAGAAAGGCCCCAAGCAGGGGTCTCAAATGCAGGGGTAAGTAGCTaGTTGGCTAGAAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: FAKPWYIGPERPQAGVSNAGVSS*LARRLK
Trigger: TTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGC...ATTTGAGACCCCTGCTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCTGTTGTATCTGTCCTTaGAGAAGGGAGCTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSCCICP*RRELRH
Trigger: GTGACGGAGCTCCCTTCTGCAAGGACAGATACAACA...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTGCTAAGCCCTGGTATATTGGGCCAGAAAGGCCCCAAGCAGGGGTCTCAAATGAACTAAAAACCTTCTaGGATTGGCAAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: FAKPWYIGPERPQAGVSNELKTF*DWQGPE
Trigger: CTCTGGTCCTTGCCAATCCCAGAAGGTTTTTAGTTC...ATTTGAGACCCCTGCTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCACAGCAGAGCCACGGATaGAGCTGGGGGAAACGGCAG +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAQQSHG*SWGKRQ
Trigger: CTGCCGTTTCCCCCAGCTCCATCCGTGGCTCTGCTG...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTGGCAGGCAGGCAGGTaGAGAATGTCTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLWQAGR*RMSGDA
Trigger: TGCATCACCAGACATTCTTCACCTGCCTGCCTGCCA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATAATGTGGTCTCCGACTaGGAGCGGTGGACTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHNVVSD*ERWTSQ
Trigger: CTGGCTAGTCCACCGCTCTCAGTCGGAGACCACATT...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373333.1
CDS-3UTR GCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCCTTCTGTCGCCTCCCTaGTACCGGAGGAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSLLSPP*YRRSTG
Trigger: TCCAGTGCTCCTCCGGTAGCAGGGAGGCGACAGAAG...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR GCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGTCCTGTCTTATGATATaGAGTTTGGCCCTTATAAAG +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMSCLMI*SLALIK
Trigger: CTTTATAAGGGCCAAACTGCATATCATAAGACAGGA...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCCCTGGGTTCAACTGCTaGGCAATAGGTCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSPGFNC*AIGLSL
Trigger: TAATGAGAGACCTATTGCCCAGCAGTTGAACCCAGG...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGTCTCTCCTCTTTACTTaGAAATTTCCATATAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMSLLFT*KFPYSR
Trigger: CCTGCTATATGGAAATTTCCAAGTAAAGAGGAGAGA...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CCA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTTTGACACTGCTGACCTaGAGGAGGGCGGGCTTACAA +
Preference number: 4 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARLTLLT*RRAGLQ
Trigger: TTGTAAGCCCGCCCTCCTCCAGGTCAGCAGTGTCAA...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAAGCCACGGATGGAGCTaGGGGAAACGGCAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTASHGWS*GKRQRC
Trigger: ACACCTCTGCCGTTTCCCCCAGCTCCATCCGTGGCT...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTGCTAAGCCCTGGTATATTGGGCCAGAAAGGCCCCAAGCAGGGGTCTCAAATCACACTGGTTATAACTaGTGTTGTATCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FAKPWYIGPERPQAGVSNHTGYN*CCICPC
Trigger: GCAAGGACAGATACAACACCAGTTATAACCAGTGTG...ATTTGAGACCCCTGCTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCAAAAGCCTGGAAGGCTaGGAAGATTGGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSKSLEG*EDWEDG
Trigger: TCCATCTTCCCAATCTTCCCAGCCTTCCAGGCTTTT...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATGCCTTCGAGGCAATGTaGTCTCCGACTGAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHAFEAM*SPTESG
Trigger: ACCGCTCTCAGTCGGAGACCACATTGCCTCGAAGGC...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373333.1
CDS-3UTR TCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATGGCAGGCTAATTGCTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHGRLIA*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGCAATTAGCCTGCC...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR TCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCATTTGGGGATGTCTGTaGACAGTAGCTGCACATCTT +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSIWGCL*TVAAHL
Trigger: AAGATGTGCAGCTACTGTTCACAGACATCCCCAAAT...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTTGGCCTTGGTCTGTGTaGCGGGTTTGCATGATATGC +
Preference number: 4 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARWPWSV*RVCMIC
Trigger: GCATATCATGCAAACCCGTCACACAGACCAAGGCCA...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCTTCTGTCGCCTCCCTaGTACCGGAGGAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: YLKTATLICILSMAAFALLLSPP*YRRSTG
Trigger: TCCAGTGCTCCTCCGGTAGCAGGGAGGCGACAGAAG...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTCTACCGGAGGAGCACTaGAATAGGAACCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARLPEEH*NRNQVL
Trigger: GAGGACTTGGTTCCTATTCCAGTGCTCCTCCGGTAG...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGTTGTGCAGGTTTTCTTaGGAGGAGGTGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWLCRFS*EEVAGR
Trigger: CCTGCCTGCCACCTCCTCCCAAGAAAACCTGCACAA...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATTTGTGCAGGTTTTCTTaGGAGGAGGTGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHLCRFS*EEVAGR
Trigger: CCTGCCTGCCACCTCCTCCCAAGAAAACCTGCACAA...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAAGATGCAAAAGAAAGCTaGAAGCCTGGGTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: CFCTATAELSSCDSMACKDAKES*KPGFNC
Trigger: GCAGTTGAACCCAGGCTTTCAGCTTTCTTTTGCATC...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTAGCAACAGCTGGAACTaGAGGAAGCAACACACTTGG +
Preference number: 4 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSSNSWN*RKQHTW
Trigger: CCAAGTGTGTTGCTTCCTTCAGTTCCAGCTGTTGCT...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCTGGCAGGCAGGCAGGTaGAGAATGTCTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSWQAGR*RMSGDA
Trigger: TGCATCACCAGACATTCTTCACCTGCCTGCCTGCCA...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTCAGTCACTGAACACTTaGGAAAGTCCTTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARQSLNT*ESPSRC
Trigger: GCACCTGGAAGGACTTTCTCAAGTGTTCAGTGACTG...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAGGCAGGTGGATCACTTaGGGTCAGGAGATAGAGACC +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAGRWIT*GQEIET
Trigger: GGTCTCTATCTCCTGACCTCAAGTGATCCACCTGCC...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTTTGTCCAGAAGCTCCTaGTGTGGTACCACTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARLSRSS*CGTTAL
Trigger: CAAAGCAGTGGTACCACAGCAGGAGCTTCTGGACAA...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TTTGCTAAGCCCTGGTATATTGGGCCAGAAAGGCCCCAAGCAGGGGTCTCAAATTGTGACAGTATGGCCTaGAAAGCTGAAAATATTTAC +
Preference number: 4 (lower is better)
Translates to: FAKPWYIGPERPQAGVSNCDSMA*KAENIY
Trigger: GTAAATATTTTCAGCTTTGCAGGCCATACTGTCACA...ATTTGAGACCCCTGCTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATCTACCGGAGGAGCACTaGAATAGGAACCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHLPEEH*NRNQVL
Trigger: GAGGACTTGGTTCCTATTCCAGTGCTCCTCCGGTAG...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CCA 90 bp TTTGCTAAGCCCTGGTATATTGGGCCAGAAAGGCCCCAAGCAGGGGTCTCAAATATGAGAAAGATTTGCTaGCTTCATGTTTTCACTGGA +
Preference number: 4 (lower is better)
Translates to: FAKPWYIGPERPQAGVSNMRKIC*LHVFTG
Trigger: TCCAGTGAAAACATGAAGCCAGCAAATCTTTCTCAT...ATTTGAGACCCCTGCTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATAGCAACAGCTGGAACTaGAGGAAGCAACACACTTGG +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHSNSWN*RKQHTW
Trigger: CCAAGTGTGTTGCTTCCTTCAGTTCCAGCTGTTGCT...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCATTCTGGAATTCCGCCTaGTCCATCCCAACGCAACGA +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAFWNSA*SIPTQR
Trigger: TCGTTGCGTTGGGATGGATCAGGCGGAATTCCAGAA...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCAGATGGTTACAGTGCTaGCACTTGAGTTTAACAACT +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSRWLQC*HLSLTT
Trigger: AGTTGTTAAACTCAAGTGTCAGCACTGTAACCATCT...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCACCCATTCCTCATCATaGAAATACTTGGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSTHSSS*KYLAKS
Trigger: AGATTTGGCCAAGTATTTTCATGATGAGGAATGGGT...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGGTGGTACCACTGCTTTaGCACATTCACCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLVVPLL*HIHHPK
Trigger: CTTTGGATGGTGAATGTGGCAAAGCAGTGGTACCAC...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATCTGCTGTGGTACCACTaGTTTGCCACATTCACCATC +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHLLWYH*FATFTI
Trigger: GATGGTGAATGTGGCAAAGCAGTGGTACCACAGCAG...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR GCA 90 bp CAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATCTGCTGTGGTACCACTaGTTTGCCACATTCACCATC +
Preference number: 4 (lower is better)
Translates to: QAVSTSRLCCYIINWASHLLWYH*FATFTI
Trigger: GATGGTGAATGTGGCAAAGCAGTGGTACCACAGCAG...ATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp GAAATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTCTATGGCTGCTTTTaGACTGCAACTGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: EMFHLLLKAKLFQHPGCAVYGCF*TATAEL
Trigger: CAATTCTGCAGTTGCAGTGCAAAAGCAGCCATAGAC...AGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp GAAATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTAAAACCTTCTGGGATTaGCAAGGACCAGAGCTACTA +
Preference number: 4 (lower is better)
Translates to: EMFHLLLKAKLFQHPGCAKTFWD*QGPELL
Trigger: TAGTAGCTCTGGTCCTTGCCAATCCCAGAAGGTTTT...AGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCGCATATGGAGGAATTTaGGCAGAATTCTGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSAYGGI*AEFCLY
Trigger: ATACAAGCAGAATTCTGCCCAAATTCCTCCATATGC...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGCTTCCCCAGGGCATATaGAGGAATTTGGGCAGAATT +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLLPQGI*RNLGRI
Trigger: AATTCTGCCCAAATTCCTCCATATGCCCTGGGGAAG...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTGCCGTGACACTTGTTaGACTAAAAACCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLCRDTC*TKNLLG
Trigger: TCCCAGAAGGTTTTTAGTTCAACAAGTGTCACGGCA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTATGGCTTATCAACCCCTaGGAATCGCACAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLWLINP*ESHSLL
Trigger: AAGGAGACTGTGCGATTCTCAGGGGTTGATAAGCCA...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCTCAAAGCCAGTTATTTaGGTAGGCATTTCAATGCAA +
Preference number: 4 (lower is better)
Translates to: THNLAGVSSWLARRLKCSSKPVI*VGISMQ
Trigger: TTGCATTGAAATGCCTACTCAAATAACTGGCTTTGA...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCTTGTCCAGAAGCTCCTaGTGTGGTACCACTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSLSRSS*CGTTAL
Trigger: CAAAGCAGTGGTACCACAGCAGGAGCTTCTGGACAA...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CCA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTGTTCTTTAAAAGCCTaGAAGGCTGGGAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSCSLKA*KAGKIG
Trigger: CCCAATCTTCCCAGCCTTCCAGGCTTTTAAAGAACA...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCGATGCAAAAGAAAGCTaGAAGCCTGGGTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSDAKES*KPGFNC
Trigger: GCAGTTGAACCCAGGCTTTCAGCTTTCTTTTGCATC...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTGTAGATCCTGTCTTATaGTATGCAGTTTGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSVDPVL*YAVWPL
Trigger: TAAGGGCCAAACTGCATATCATAAGACAGGATCTAC...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp GAAATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTTGTGTACTTTCATCTTaGATGATCTTTGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EMFHLLLKAKLFQHPGCACVLSS*MIFAAS
Trigger: AGAGGCAGCAAAGATCATTCAAGATGAAAGTACACA...AGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGACTCTCTGACCTTTTaGATCAGCTGGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWDSLTF*ISWSSM
Trigger: CATTGAAGACCAGCTGATTCAAAAGGTCAGAGAGTC...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTATCCACAAATTTCCTaGACGCAAGTCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLYPQIS*TQVLFW
Trigger: CCAGAACAAGACTTGCGTTCAGGAAATTTGTGGATA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGGTTGGCTAGAAGACTaGAATGTTCCACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWGWLED*NVPLAS
Trigger: AGAAGCAAGTGGAACATTTCAGTCTTCTAGCCAACC...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCGTGGTACCACTGCTTTaGCACATTCACCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSVVPLL*HIHHPK
Trigger: CTTTGGATGGTGAATGTGGCAAAGCAGTGGTACCAC...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR GCA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTGGGCAGAGAGGAATTTaGAAACTTCACTACAGAATG +
Preference number: 4 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSGQRGI*KLHYRM
Trigger: CATTCTGTAGTGAAGTTTGCAAATTCCTCTCTGCCC...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTACAGCCACACTTATCTaGATATTGTCTATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARTATLI*ILSMAA
Trigger: AGCAGCCATAGACAATATGCAGATAAGTGTGGCTGT...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTATTGGTAATGGATAGTTaGACACCTTCTGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLLVMDS*TPSVAS
Trigger: GGAGGCGACAGAAGGTGTCCAACTATCCATTACCAA...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCCCTGGGTTCAACTGCTaGGCAATAGGTCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSPGFNC*AIGLSL
Trigger: TAATGAGAGACCTATTGCCCAGCAGTTGAACCCAGG...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CCA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAAGATGACAAGCATGATTaGCTGCAGAAATCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: CFCTATAELSSCDSMACKDDKHD*LQKSLL
Trigger: TAGCAAAGATTTCTGCAGCCAATCATGCTTGTCATC...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp CAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATAAGTTTGCTAAGCCCTaGTATATTGGGCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: QAVSTSRLCCYIINWASHKFAKP*YIGPER
Trigger: CCTTTCTGGCCCAATATACCAGGGCTTAGCAAACTT...ATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR CAA 72 bp CTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTaGTGCTGTTACATTATAAACTGGGCTTCTCATTAC +
Preference number: 4 (lower is better)
Translates to: LASKGQAVSTSR*CCYIINWASHY
Trigger: GTAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATGTAGATCCTGTCTTATaGTATGCAGTTTGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHVDPVL*YAVWPL
Trigger: TAAGGGCCAAACTGCATATCATAAGACAGGATCTAC...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGAGGTTTTACAACTATaGCATGAAACCTGGACACCT +
Preference number: 4 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWEVLQL*HETWTP
Trigger: AGGTGTCCAGGTTTCATGTCATAGTTGTAAAACCTC...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAAATAGGTAAATCTGTCTaGCATTCTTTGTGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: CFCTATAELSSCDSMACKIGKSV*HSLCCV
Trigger: TACACAGCACAAAGAATGTCAGACAGATTTACCTAT...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAATCCTGTCTTATGATATaGAGTTTGGCCCTTATAAAG +
Preference number: 4 (lower is better)
Translates to: CFCTATAELSSCDSMACKSCLMI*SLALIK
Trigger: CTTTATAAGGGCCAAACTGCATATCATAAGACAGGA...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTTGAATGATCTTTGCTaGCTCTTTAGTAACTGCACC +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLLNDLC*LFSNCT
Trigger: GGTGCAGTTACTAAAGAGGCAGCAAAGATCATTCAA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCATGGAGAATGGCTTCTTaGTTGCAGCAGTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAWRMAS*LQQFGK
Trigger: CTTTCCAAACTGCTGCAAGCAAGAAGCCATTCTCCA...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGTGCCTCGCCACTTTATaGACTCGCTTAGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: YLKTATLICILSMAAFALCLATL*TRLVYP
Trigger: AGGGTAAACTAAGCGAGTCCATAAAGTGGCGAGGCA...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGGTAGTTGTGACAGTATaGCCTGCAAAGCTGAAAATA +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLVVVTV*PAKLKI
Trigger: TATTTTCAGCTTTGCAGGCCATACTGTCACAACTAC...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCGTAGATCCTGTCTTATaGTATGCAGTTTGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSVDPVL*YAVWPL
Trigger: TAAGGGCCAAACTGCATATCATAAGACAGGATCTAC...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATATTGTAAAGCAACAATaGCCCCACAAGGACATTAGA +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHIVKQQ*PHKDIR
Trigger: TCTAATGTCCTTGTGGGGTCATTGTTGCTTTACAAT...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCGCTAATATATTGGCCTaGTTAAGGTATCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSANILA*LRYQAA
Trigger: GGCTGCTTGATACCTTAATCAGGCCAATATATTAGC...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR GCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCATGGGTTAAAGCAACTTaGTGGGATTGTTCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAWVKAT*WDCSAR
Trigger: TCTTGCTGAACAATCCCAGCAAGTTGCTTTAACCCA...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGACTTTCTTGAGTTTTTaGCTGTTGGACACATCCATA +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLTFLSF*LLDTSI
Trigger: TATGGATGTGTCCAACAGCCAAAAACTCAAGAAAGT...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTTGCTAAATACATTCTaGAAAGCAACCACACAACTG +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLLLNTF*KATTQL
Trigger: CAGTTGTGTGGTTGCTTTCCAGAATGTATTTAGCAA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAAAGAGTTTGTTCCTTTTaGCTTGCTAAATACATTCTG +
Preference number: 4 (lower is better)
Translates to: CFCTATAELSSCDSMACKRVCSF*LAKYIL
Trigger: CAGAATGTATTTAGCAAGCCAAAAGGAACAAACTCT...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTACAACCATCACACTTaGCCATCTGATAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLYNHHT*PSDKTE
Trigger: TTCTGTTTTATCAGATGGCCAAGTGTGATGGTTGTA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTATTTGTGCTGTGTATGTaGTTTGCAAGAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLFVLCM*FARSGL
Trigger: AAGGCCACTTCTTGCAAACCACATACACAGCACAAA...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTATCTGCATATTGTCTATaGCTGCTTTTGCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLSAYCL*LLLHCN
Trigger: GTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGA...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCAGGTCTCTCATTAACTaGAGACACACCACCAATTTT +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSRSLIN*RHTTNF
Trigger: AAAATTGGTGGTGTGTCTTCAGTTAATGAGAGACCT...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR TCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATTTTCACTTAATAAGGTaGATCTGCCAGTGGCATAAT +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHFHLIR*ICQWHN
Trigger: ATTATGCCACTGGCAGATTCACCTTATTAAGTGAAA...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR GCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATTCCTGTCTTATGATATaGAGTTTGGCCCTTATAAAG +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHSCLMI*SLALIK
Trigger: CTTTATAAGGGCCAAACTGCATATCATAAGACAGGA...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR GCA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTCATCAGAGCAATTCTTaGCACAAAACAGAAACATTT +
Preference number: 4 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARHQSNS*HKTETF
Trigger: AAATGTTTCTGTTTTGTGGCAAGAATTGCTCTGATG...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGATCTTGAATGATCTTTaGTGCCTCTTTAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWILNDL*CLFSNC
Trigger: GCAGTTACTAAAGAGGCAGCAAAGATCATTCAAGAT...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGATGATGAGAAAGATTTaGTGGCTTCATGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: KTATLICILSMAAFALQLMMRKI*WLHVFT
Trigger: AGTGAAAACATGAAGCCAGCAAATCTTTCTCATCAT...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTAGAAAGTCCTTCCAGGTaGTCAAAAATAATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLESPSR*SKIILV
Trigger: CACAAGGATTATTTTTGAGCACCTGGAAGGACTTTC...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATACTTTCTTGAGTTTTTaGCTGTTGGACACATCCATA +
Preference number: 4 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHTFLSF*LLDTSI
Trigger: TATGGATGTGTCCAACAGCCAAAAACTCAAGAAAGT...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CCA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGGTTAAAGCAACTTGCTaGGATTGTTCAGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YLKTATLICILSMAAFALVKATC*DCSARG
Trigger: ACCTCTTGCTGAACAATCCCAGCAAGTTGCTTTAAC...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp CAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATGCTTCATGTTTTCACTaGATAAGATCTCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: QAVSTSRLCCYIINWASHASCFH*IRSLHK
Trigger: TTTGTGGAGAGATCTTATCCAGTGAAAACATGAAGC...ATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCTTGGTAATGGATAGTTaGACACCTCTTTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSLVMDS*TPLSRS
Trigger: AGACCTTGAAAGAGGTGTCCAACTATCCATTACCAA...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373333.1
CDS-3UTR TCA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGAGGTCTCTCATTAACTaGAGACACACCACCAATTTT +
Preference number: 4 (lower is better)
Translates to: YLKTATLICILSMAAFALRSLIN*RHTTNF
Trigger: AAAATTGGTGGTGTGTCTTCAGTTAATGAGAGACCT...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTAAGGTATTTTTGCCAATaGCATCACACTGGTTATAAC +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLRYFCQ*HHTGYN
Trigger: GTTATAACCAGTGTGATGTCATTGGCAAAAATACCT...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR TCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTACTTCTTCGAAGTCGGTaGGATTATTATTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLLLRSR*DYYFGD
Trigger: ATCACCAAAATAATAATCTCACCGACTTCGAAGAAG...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGTCTGTGAACAGTAGCTaGACATCTTACAGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: YLKTATLICILSMAAFALSVNSS*TSYSSF
Trigger: GAAACTACTGTAAGATGTGCAGCTACTGTTCACAGA...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp CAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATAATCATTCTCTTGTGTaGGCTTCAACCACATTTTTA +
Preference number: 4 (lower is better)
Translates to: QAVSTSRLCCYIINWASHNHSLV*ASTTFL
Trigger: TAAAAATGTGGTTGAAGCGCACACAAGAGAATGATT...ATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCACTTTCTTGAGTTTTTaGCTGTTGGACACATCCATA +
Preference number: 4 (lower is better)
Translates to: FKYLLCARPFANTVSLKSTFLSF*LLDTSI
Trigger: TATGGATGTGTCCAACAGCCAAAAACTCAAGAAAGT...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTAGGAAGATTGGGAAGATaGAAATTTCATAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLGRLGR*KFHSIF
Trigger: GAAGATGCTATGAAATTTCCATCTTCCCAATCTTCC...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAATGCCGCTGTATTCATaGCAACTTCTTGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAMPLYS*QLLEFL
Trigger: CAAAAATTCAAGAAGTTGCCATGAATACAGCGGCAT...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357182.9
3UTR CAA 72 bp CAGAGCCACAATTTAAAAGCAAGCTCTTACTGTTTTTaGCCTGTAGTGACTATTAACAACACACTGTATTCC +
Preference number: 4 (lower is better)
Translates to: QSHNLKASSYCF*PVVTINNTLYS
Trigger: GGAATACAGTGTGTTGTTAATAGTCACTACAGGCAAAAAACAGTAAGAGCTTGCTTTTAAATTGTGGCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR GCA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAAAAACTCTTCTAACTTaGCCTCCAATCGATTTTCTA +
Preference number: 4 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAKTLLT*PPIDFL
Trigger: TAGAAAATCGATTGGAGGGCAAGTTAGAAGAGTTTT...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR GCA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTATATAGTTACCCAAGCTaGTTAGATCTATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLYSYPS*LDLSFS
Trigger: GGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATA...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CCA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGTTAATTCTTCAGCAATaGAGAATGGCTTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: YLKTATLICILSMAAFALLILQQ*RMASCL
Trigger: CAAGCAAGAAGCCATTCTCCATTGCTGAAGAATTAA...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS TCA 90 bp GACACTGCTGACCTGGAGGAGGGCGGGCTTACAACCACTTGGCCCTaGGACAGGGGCACCGCCGAAGAGTTTGTTCCTTTTGGCTTGCTA +
Preference number: 5 (lower is better)
Translates to: DTADLEEGGLTTTWP*DRGTAEEFVPFGLL
Trigger: TAGCAAGCCAAAAGGAACAAACTCTTCGGCGGTGCCCCTGTCTCAGGGCCAAGTGGTTGTAAGCCCGCCCTCCTCCAGGTCAGCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357182.9
ENST00000472971.1
ENST00000493328.5
CDS TCA 90 bp GTTGGACACTCGCCACAAAATATCTACGGGCGCTCATCCCTCCTCTaGGAACCGCACGCTTTCCGAAATTCTCCTTCCCACCAAGAATTC +
Preference number: 5 (lower is better)
Translates to: VGHSPQNIYGRSSLL*EPHAFRNSPSHQEF
Trigger: GAATTCTTGGTGGGAAGGAGAATTTCGGAAAGCGTGCGGTTCTCAGAGGAGGGATGAGCGCCCGTAGATATTTTGTGGCGAGTGTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415531.5
CDS-3UTR CAA 90 bp TCATCTGAGCCCGGGGAGTTCAAGGCTGCAGTGAGCTGTGATCACTCTACCATGGACACATCCATACTCTaGAGCATTGTCTGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSEPGEFKAAVSCDHSTMDTSIL*SIVWFF
Trigger: GAAGAACCAGACAATGCTCAAGAGTATGGATGTGTC...CATGGTAGAGTGATCACAGCTCACTGCAGCCTTGAACTCCCCGGGCTCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317538.9
CDS-3UTR CAA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCCTAAGCCCTGGTATATaGGGCCAGAAAGGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: THNLAGVSSWLARRLKCSLSPGI*GQKGPK
Trigger: CTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAG...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TTTGCTAAGCCCTGGTATATTGGGCCAGAAAGGCCCCAAGCAGGGGTCTCAAATTTGAGTTTTTGGCTGTaGGACACATCCATACTCTTG +
Preference number: 5 (lower is better)
Translates to: FAKPWYIGPERPQAGVSNLSFWL*DTSILL
Trigger: CAAGAGTATGGATGTGTCCAACAGCCAAAAACTCAA...ATTTGAGACCCCTGCTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAAGTGTTGTATCTGTCCTaGCAGAAGGGAGCTCCGTCA +
Preference number: 5 (lower is better)
Translates to: CFCTATAELSSCDSMACKVLYLS*QKGAPS
Trigger: TGACGGAGCTCCCTTCTGCAAGGACAGATACAACAC...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTGTTACCTCCTCCTATaGACACTGCTGACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSCYLLL*TLLTWR
Trigger: CCTCCAGGTCAGCAGTGTCAATAGGAGGAGGTAACA...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTTTTCCAGCTGGGCACGTTTGCAAGAAGTGGCCTaGGTCTGTGTGACGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SIYSYPSCLDLSFSSWARLQEVA*VCVTGL
Trigger: CAAACCCGTCACACAGACCAAGGCCACTTCTTGCAA...ACGTGCCCAGCTGGAAAAAGATAGATCTAAGCAGCTTGGGTAACTATAAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp ACTCACAACCTTGCAGGGGTAAGTAGCTGGTTGGCTAGAAGACTGAAATGTTCCATGGAGAATGGCTTCTaGCTTGCAGCAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: THNLAGVSSWLARRLKCSMENGF*LAAVWK
Trigger: TTTCCAAACTGCTGCAAGCAAGAAGCCATTCTCCAT...GGAACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCCTGCAAGGTTGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TTTGCTAAGCCCTGGTATATTGGGCCAGAAAGGCCCCAAGCAGGGGTCTCAAATTTAACATTCTCCCTCTaGATATCCAACGTACTTCAG +
Preference number: 5 (lower is better)
Translates to: FAKPWYIGPERPQAGVSNLTFSL*ISNVLQ
Trigger: CTGAAGTACGTTGGATATCAAGAGGGAGAATGTTAA...ATTTGAGACCCCTGCTTGGGGCCTTTCTGGCCCAATATACCAGGGCTTAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAATGTGGTACCACTGCTTaGCCACATTCACCATCCAAA +
Preference number: 5 (lower is better)
Translates to: CFCTATAELSSCDSMACKCGTTA*PHSPSK
Trigger: TTTGGATGGTGAATGTGGCAAAGCAGTGGTACCACA...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp GAAATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTAAAAACCTTCTGGGATaGGCAAGGACCAGAGCTACT +
Preference number: 5 (lower is better)
Translates to: EMFHLLLKAKLFQHPGCAKNLLG*ARTRAT
Trigger: AGTAGCTCTGGTCCTTGCCAATCCCAGAAGGTTTTT...AGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAAACAGTCACTGAACACTaGAGAAAGTCCTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CFCTATAELSSCDSMACKTVTEH*RKSFQV
Trigger: CACCTGGAAGGACTTTCTCAAGTGTTCAGTGACTGT...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTGTCTGTGTGACGGGTTaGCATGATATGCCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSVCVTG*HDMPLF
Trigger: GAACAAAGGCATATCATGCAAACCCGTCACACAGAC...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp GAAATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTAGAATGGCTTCTTGCTaGCAGCAGTTTGGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: EMFHLLLKAKLFQHPGCARMASC*QQFGKQ
Trigger: TTGCTTTCCAAACTGCTGCAAGCAAGAAGCCATTCT...AGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS TCA 90 bp GATTTGCTGGCTTCATGTTTTCACTGGATAAGATCTCTCCACAAATaGCACACTGTGGCCTTGGTGAACTTTCTTTTGATCCAGGACAGA +
Preference number: 5 (lower is better)
Translates to: DLLASCFHWIRSLHK*HTVALVNFLLIQDR
Trigger: TCTGTCCTGGATCAAAAGAAAGTTCACCAAGGCCACAGTGTGTCATTTGTGGAGAGATCTTATCCAGTGAAAACATGAAGCCAGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS-3UTR CAA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATTGTGGTACCACTGCTTaGCCACATTCACCATCCAAA +
Preference number: 5 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHCGTTA*PHSPSK
Trigger: TTTGGATGGTGAATGTGGCAAAGCAGTGGTACCACA...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATAAGGAAGCAACACACTaGGGCCAGATGATGCAAAAG +
Preference number: 5 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHKEATH*GQMMQK
Trigger: CTTTTGCATCATCTGGCCCAAGTGTGTTGCTTCCTT...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGTGTCTTTCGAGCAGTTaGTGCAGGTTTTCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWCLSSS*CRFSWE
Trigger: CTCCCAAGAAAACCTGCACAAACTGCTCGAAAGACA...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCATGCTGTGTATGTGGTTaGCAAGAAGTGGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTACCVCG*QEVALV
Trigger: GACCAAGGCCACTTCTTGCAAACCACATACACAGCA...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp GAAATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTTTTTGTCTCCAGCACTaGAACCCAAAACTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: EMFHLLLKAKLFQHPGCAFCLQH*NPKLLN
Trigger: GTTCAGAAGTTTTGGGTTCAAGTGCTGGAGACAAAA...AGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAAGGAATAGTTTTCATTTaGTCTCCAGCACTTGAACCC +
Preference number: 5 (lower is better)
Translates to: CFCTATAELSSCDSMACKGIVFI*SPALEP
Trigger: GGGTTCAAGTGCTGGAGACAAAATGAAAACTATTCC...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTTGTCTATGGCTGCTTTaGCACTGCAACTGCAGAATT +
Preference number: 5 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSCLWLL*HCNCRI
Trigger: AATTCTGCAGTTGCAGTGCAAAAGCAGCCATAGACA...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAAAGGAAGCAACACACTaGGGCCAGATGATGCAAAAG +
Preference number: 5 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAKEATH*GQMMQK
Trigger: CTTTTGCATCATCTGGCCCAAGTGTGTTGCTTCCTT...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCAAGGAAGCAACACACTaGGGCCAGATGATGCAAAAG +
Preference number: 5 (lower is better)
Translates to: FKYLLCARPFANTVSLKSKEATH*GQMMQK
Trigger: CTTTTGCATCATCTGGCCCAAGTGTGTTGCTTCCTT...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATTATACTTCGAGCAGTTaGTGCAGGTTTTCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHYTSSS*CRFSWE
Trigger: CTCCCAAGAAAACCTGCACAAACTGCTCGAAGTATA...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCATGGGCAGAATTCTGCTaGTATGCCGTGACACTTGTT +
Preference number: 5 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTAWAEFC*YAVTLV
Trigger: AACAAGTGTCACGGCATACAAGCAGAATTCTGCCCA...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGCGGGCAGAGAGGAATTaGCAAACTTCACTACAGAAT +
Preference number: 5 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWRAERN*QTSLQN
Trigger: ATTCTGTAGTGAAGTTTGCAAATTCCTCTCTGCCCG...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTCTGTGTACTTTCATCTaGAATGATCTTTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSLCTFI*NDLCCL
Trigger: GAGGCAGCAAAGATCATTCAAGATGAAAGTACACAG...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp GAAATGTTCCACTTGCTTCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGGAGTTCTGGGTAACTaGTCTTTGCATTTATCCAAA +
Preference number: 5 (lower is better)
Translates to: EMFHLLLKAKLFQHPGCAGVLGN*SLHLSK
Trigger: TTTGGATAAATGCAAAGACAAGTTACCCAGAACTCC...AGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGAAGCAAGTGGAACATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCTAAAGGCCAAGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGACTGAAATGTTCCACTaGCTTCTAAAGGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SKGQAVSTSRLCCYIINWTEMFH*LLKAKL
Trigger: CAGCTTGGCCTTTAGAAGCAAGTGGAACATTTCAGT...CCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCTTGGCCTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTAGGGGTAAGTAGCTGGTaGGCTAGAAGACTGAAATGT +
Preference number: 5 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLGVSSW*ARRLKC
Trigger: ACATTTCAGTCTTCTAGCCAACCAGCTACTTACCCC...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS TCA 90 bp TTTCTGATGACTCATCTATCTGAAGGGCAAACCACTTTGACTCTCTaGCCTTTTGAATCAGCTGGTCTTCAATGTCTGCAGATAGTTCAT +
Preference number: 5 (lower is better)
Translates to: FLMTHLSEGQTTLTL*PFESAGLQCLQIVH
Trigger: ATGAACTATCTGCAGACATTGAAGACCAGCTGATTCAAAAGGTCAGAGAGTCAAAGTGGTTTGCCCTTCAGATAGATGAGTCATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS-3UTR CAA 90 bp AAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCAACTGTACTTTCTTGAGTTTTaGGCTGTTGGACACATCCAT +
Preference number: 5 (lower is better)
Translates to: KTATLICILSMAAFALQLYFLEF*AVGHIH
Trigger: ATGGATGTGTCCAACAGCCAAAAACTCAAGAAAGTA...CAGTTGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTAGGCATATGGAGGAATTaGGGCAGAATTCTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLGIWRN*GRILLV
Trigger: TACAAGCAGAATTCTGCCCAAATTCCTCCATATGCC...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TCAAATCCCCCTGCTGCTTCCATTTATAGTTACCCAAGCTGCTTAGATCTATCTCAAAACTCTTCTAACTaGCCCTCCAATCGATTTTCT +
Preference number: 5 (lower is better)
Translates to: SNPPAASIYSYPSCLDLSQNSSN*PSNRFS
Trigger: AGAAAATCGATTGGAGGGCAAGTTAGAAGAGTTTTG...AGATAGATCTAAGCAGCTTGGGTAACTATAAATGGAAGCAGCAGGGGGATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TGCTTTTGCACTGCAACTGCAGAATTGAGTAGTTGTGACAGTATGGCCTGCAAATTCAAAGCCAGTTATTaGAGTAGGCATTTCAATGCA +
Preference number: 5 (lower is better)
Translates to: CFCTATAELSSCDSMACKFKASY*SRHFNA
Trigger: TGCATTGAAATGCCTACTCAAATAACTGGCTTTGAA...TTTGCAGGCCATACTGTCACAACTACTCAATTCTGCAGTTGCAGTGCAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS TCA 90 bp AATCTTTTTAACATTCTCCCTCTTGATATCCAACGTACTTCAGCATaGAGCGGTAAACTCACATGCTCAGATCCCATCTCTTCACACAAA +
Preference number: 5 (lower is better)
Translates to: NLFNILPLDIQRTSA*SGKLTCSDPISSHK
Trigger: TTTGTGTGAAGAGATGGGATCTGAGCATGTGAGTTTACCGCTTCATGCTGAAGTACGTTGGATATCAAGAGGGAGAATGTTAAAAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS-3UTR CAA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCTTGAGTTTTTGGCTGTaGGACACATCCATACTCTTG +
Preference number: 5 (lower is better)
Translates to: FKYLLCARPFANTVSLKSLSFWL*DTSILL
Trigger: CAAGAGTATGGATGTGTCCAACAGCCAAAAACTCAA...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATTACTTTCTTGAGTTTTaGGCTGTTGGACACATCCAT +
Preference number: 5 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHYFLEF*AVGHIH
Trigger: ATGGATGTGTCCAACAGCCAAAAACTCAAGAAAGTA...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp AGCTGTTTCAACATCCAGGTTGTGCTGTTACATTATAAACTGGGCTTCTCATTAACTGCAACTGCAGAATaGAGTAGTTGTGACAGTATG +
Preference number: 5 (lower is better)
Translates to: SCFNIQVVLLHYKLGFSLTATAE*SSCDSM
Trigger: CATACTGTCACAACTACTCAATTCTGCAGTTGCAGT...TAATGAGAAGCCCAGTTTATAATGTAACAGCACAACCTGGATGTTGAAACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATCGAATAGATTTCTTCTaGGTAATGGATAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHRIDFF*VMDSWT
Trigger: TGTCCAACTATCCATTACCAAGAAGAAATCTATTCG...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp TTTAAGTACTTGCTATGTGCTAGGCCATTTGCTAACACTGTCTCATTAAAGTCCTACTTTCTTGAGTTTTaGGCTGTTGGACACATCCAT +
Preference number: 5 (lower is better)
Translates to: FKYLLCARPFANTVSLKSYFLEF*AVGHIH
Trigger: ATGGATGTGTCCAACAGCCAAAAACTCAAGAAAGTA...GGACTTTAATGAGACAGTGTTAGCAAATGGCCTAGCACATAGCAAGTACTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS-3UTR CAA 90 bp TTAAATGGTGGGTGTCTACAATTACAGGATAGTCCTGCAATTCCCACATGTCATAGCTCTTACTGTTTTTaGCCTGTAGTGACTATTAAC +
Preference number: 5 (lower is better)
Translates to: LNGGCLQLQDSPAIPTCHSSYCF*PVVTIN
Trigger: GTTAATAGTCACTACAGGCAAAAAACAGTAAGAGCT...ATGACATGTGGGAATTGCAGGACTATCCTGTAATTGTAGACACCCACCATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317538.9
ENST00000373333.1
CDS TCA 90 bp TTATGTAAACATGGAGACAACTTTTCTGCCACTAAACGTTCACGGTaGATAAAACAATGTGTAAATGCCGCTGTATTCATGGCAACTTCT +
Preference number: 5 (lower is better)
Translates to: LCKHGDNFSATKRSR*IKQCVNAAVFMATS
Trigger: AGAAGTTGCCATGAATACAGCGGCATTTACACATTGTTTTATTCACCGTGAACGTTTAGTGGCAGAAAAGTTGTCTCCATGTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS-3UTR CAA 90 bp TTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCATCATCAGAGCAATTCTaGCCACAAAACAGAAACATT +
Preference number: 5 (lower is better)
Translates to: FKNSHTYLHIVYGCFCTASSEQF*PQNRNI
Trigger: AATGTTTCTGTTTTGTGGCAAGAATTGCTCTGATGA...TGCAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGCGAATAGATTTCTTCTaGGTAATGGATAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: YLKTATLICILSMAAFALRIDFF*VMDSWT
Trigger: TGTCCAACTATCCATTACCAAGAAGAAATCTATTCG...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS-3UTR CAA 90 bp TATTTAAAAACAGCCACACTTATCTGCATATTGTCTATGGCTGCTTTTGCACTGAATGATGAGAAAGATTaGCTGGCTTCATGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: YLKTATLICILSMAAFALNDEKD*LASCFH
Trigger: GTGAAAACATGAAGCCAGCAAATCTTTCTCATCATT...CAGTGCAAAAGCAGCCATAGACAATATGCAGATAAGTGTGGCTGTTTTTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS TCA 90 bp ATCAGCTGGTCTTCAATGTCTGCAGATAGTTCATCAATCCTGTGTTaGATTGTAACATTAGAAAGTGGAATAGTTTTCATTTTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: ISWSSMSADSSSILC*IVTLESGIVFILSP
Trigger: TGGAGACAAAATGAAAACTATTCCACTTTCTAATGTTACAATTCAACACAGGATTGATGAACTATCTGCAGACATTGAAGACCAGCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS CAA 90 bp CACGGATGGAGCTGGGGGAAACGGCAGAGGTGTTACCTCCTCCTATaGACACTGCTGACCTGGAGGAGGGCGGGCTTACAACCACTTGGC +
Preference number: 6 (lower is better)
Translates to: HGWSWGKRQRCYLLL*TLLTWRRAGLQPLG
Trigger: GCCAAGTGGTTGTAAGCCCGCCCTCCTCCAGGTCAGCAGTGTCAATAGGAGGAGGTAACACCTCTGCCGTTTCCCCCAGCTCCATCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357182.9
ENST00000472971.1
ENST00000493328.5
CDS TCA 72 bp GACCTGGAGGAGGGCGGGCTTACAACCACTTGGCCCTaGGACAGGGGCACCGCCGAAGAGTTTGTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: DLEEGGLTTTWP*DRGTAEEFVPF
Trigger: AAAAGGAACAAACTCTTCGGCGGTGCCCCTGTCTCAGGGCCAAGTGGTTGTAAGCCCGCCCTCCTCCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357182.9
ENST00000472971.1
ENST00000493328.5
CDS TCA 72 bp CTAGACAGGGATTATTTTCTCTTCTGGAATTCCGCCTaGTCCATCCCAACGCAACGACCGGCCAACCACGCC +
Preference number: 6 (lower is better)
Translates to: LDRDYFLFWNSA*SIPTQRPANHA
Trigger: GGCGTGGTTGGCCGGTCGTTGCGTTGGGATGGATCAGGCGGAATTCCAGAAGAGAAAATAATCCCTGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357182.9
CDS TCA 72 bp TCGCCACAAAATATCTACGGGCGCTCATCCCTCCTCTaGGAACCGCACGCTTTCCGAAATTCTCCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: SPQNIYGRSSLL*EPHAFRNSPSH
Trigger: GTGGGAAGGAGAATTTCGGAAAGCGTGCGGTTCTCAGAGGAGGGATGAGCGCCCGTAGATATTTTGTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415531.5
CDS CAA 72 bp GACAGGGGCACCGCCGAAGAGTTTGTTCCTTTTGGCTaGCTAAATACATTCTGGAAAGCAACCACACAACTG +
Preference number: 6 (lower is better)
Translates to: DRGTAEEFVPFG*LNTFWKATTQL
Trigger: CAGTTGTGTGGTTGCTTTCCAGAATGTATTTAGCAAGCCAAAAGGAACAAACTCTTCGGCGGTGCCCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357182.9
ENST00000472971.1
ENST00000493328.5
CDS TCA 72 bp TGGATCCTCCTGAACACTGCTGGTTGGAGCATACATTaGTGTAACTTTTCAGGAGGGCAATTTAGGCAACAG +
Preference number: 6 (lower is better)
Translates to: WILLNTAGWSIH*CNFSGGQFRQQ
Trigger: CTGTTGCCTAAATTGCCCTCCTGAAAAGTTACATCAATGTATGCTCCAACCAGCAGTGTTCAGGAGGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493328.5
CDS CCA 72 bp TGGTTCTTCTTTAATTTTGTCCAGAAGCTCCTGCTGTaGTACCACTGCTTTGCCACATTCACCATCCAAAGG +
Preference number: 6 (lower is better)
Translates to: WFFFNFVQKLLL*YHCFATFTIQR
Trigger: CCTTTGGATGGTGAATGTGGCAAAGCAGTGGTACCACAGCAGGAGCTTCTGGACAAAATTAAAGAAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317538.9
ENST00000357182.9
ENST00000373333.1
ENST00000415531.5
ENST00000471566.1
ENST00000493328.5
CDS CAA 72 bp AAAGAGTGTCTCAGGCTCAAACGAATAGATTTCTTCTaGGTAATGGATAGTTGGACACCTTCTGTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: KECLRLKRIDFF*VMDSWTPSVAS
Trigger: GGAGGCGACAGAAGGTGTCCAACTATCCATTACCAAGAAGAAATCTATTCGTTTGAGCCTGAGACACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317538.9
ENST00000357182.9
ENST00000471566.1
CDS GCA 72 bp TTTCTACCAAATTTGGGGATGTCTGTGAACAGTAGCTaGACATCTTACAGTAGTTTCCCCATCGTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: FLPNLGMSVNSS*TSYSSFPIVLQ
Trigger: TTGGAGAACGATGGGGAAACTACTGTAAGATGTGCAGCTACTGTTCACAGACATCCCCAAATTTGGTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS CAA 90 bp TTTTACCTCAAAGAGTGTCTCAGGCTCAAACGAATAGATTTCTTCTaGGTAATGGATAGTTGGACACCTCTTTCAAGGTCTCCGTGTGAG +
Preference number: 6 (lower is better)
Translates to: FYLKECLRLKRIDFF*VMDSWTPLSRSPCE
Trigger: CTCACACGGAGACCTTGAAAGAGGTGTCCAACTATCCATTACCAAGAAGAAATCTATTCGTTTGAGCCTGAGACACTCTTTGAGGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373333.1
CDS TCA 72 bp GCTTCATGTTTTCACTGGATAAGATCTCTCCACAAATaGCACACTGTGGCCTTGGTGAACTTTCTTTTGATC +
Preference number: 6 (lower is better)
Translates to: ASCFHWIRSLHK*HTVALVNFLLI
Trigger: GATCAAAAGAAAGTTCACCAAGGCCACAGTGTGTCATTTGTGGAGAGATCTTATCCAGTGAAAACATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS CCA 72 bp CCTTTGTTCTTTAAAAGCCTGGAAGGCTGGGAAGATTaGGAAGATGGAAATTTCATAGCATCTTCCTGTGTA +
Preference number: 6 (lower is better)
Translates to: PLFFKSLEGWED*EDGNFIASSCV
Trigger: TACACAGGAAGATGCTATGAAATTTCCATCTTCCCAATCTTCCCAGCCTTCCAGGCTTTTAAAGAACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS TCA 72 bp TGGGTTCAACTGCTGGGCAATAGGTCTCTCATTAACTaGAGACACACCACCAATTTTCAATTTACTTTCTTG +
Preference number: 6 (lower is better)
Translates to: WVQLLGNRSLIN*RHTTNFQFTFL
Trigger: CAAGAAAGTAAATTGAAAATTGGTGGTGTGTCTTCAGTTAATGAGAGACCTATTGCCCAGCAGTTGAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317538.9
ENST00000357182.9
ENST00000373333.1
ENST00000415531.5
ENST00000460607.1
CDS TCA 72 bp CATGGAGACAACTTTTCTGCCACTAAACGTTCACGGTaGATAAAACAATGTGTAAATGCCGCTGTATTCATG +
Preference number: 6 (lower is better)
Translates to: HGDNFSATKRSR*IKQCVNAAVFM
Trigger: CATGAATACAGCGGCATTTACACATTGTTTTATTCACCGTGAACGTTTAGTGGCAGAAAAGTTGTCTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS CAA 72 bp AAAGAGTGTCTCAGGCTCAAACGAATAGATTTCTTCTaGGTAATGGATAGTTGGACACCTCTTTCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: KECLRLKRIDFF*VMDSWTPLSRS
Trigger: AGACCTTGAAAGAGGTGTCCAACTATCCATTACCAAGAAGAAATCTATTCGTTTGAGCCTGAGACACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373333.1
CDS TCA 72 bp CAATGTGTAAATGCCGCTGTATTCATGGCAACTTCTTaGATTTTTGCTTTTAAACCAGAATACCTGCCAGTC +
Preference number: 6 (lower is better)
Translates to: QCVNAAVFMATS*IFAFKPEYLPV
Trigger: GACTGGCAGGTATTCTGGTTTAAAAGCAAAAATTCAAGAAGTTGCCATGAATACAGCGGCATTTACACATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS CAA 72 bp AAAGAGTGTCTCAGGCTCAAACGAATAGATTTCTTCTaGGTAATGGATAGTTGGACACTCGCCACAAAATAT +
Preference number: 6 (lower is better)
Translates to: KECLRLKRIDFF*VMDSWTLATKY
Trigger: ATATTTTGTGGCGAGTGTCCAACTATCCATTACCAAGAAGAAATCTATTCGTTTGAGCCTGAGACACTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415531.5
CDS CAA 90 bp TTTTACCTCAAAGAGTGTCTCAGGCTCAAACGAATAGATTTCTTCTaGGTAATGGATAGTTGGACACCTAAAATACATACTCAGGCTTAT +
Preference number: 6 (lower is better)
Translates to: FYLKECLRLKRIDFF*VMDSWTPKIHTQAY
Trigger: ATAAGCCTGAGTATGTATTTTAGGTGTCCAACTATCCATTACCAAGAAGAAATCTATTCGTTTGAGCCTGAGACACTCTTTGAGGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493328.5
CDS CAA 72 bp GTCGTAATTCAAATAATCTTTTTAACATTCTCCCTCTaGATATCCAACGTACTTCAGCATGAAGCGGTAAAC +
Preference number: 6 (lower is better)
Translates to: VVIQIIFLTFSL*ISNVLQHEAVN
Trigger: GTTTACCGCTTCATGCTGAAGTACGTTGGATATCAAGAGGGAGAATGTTAAAAAGATTATTTGAATTACGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5
CDS TCA 72 bp ATACTAGTATTGACTGTACTGTATATTCAACCTTTCTaGATTTTGATACTCAGTGTCAGTGAGGTTGTAGAG +
Preference number: 6 (lower is better)
Translates to: ILVLTVLYIQPF*ILILSVSEVVE
Trigger: CTCTACAACCTCACTGACACTGAGTATCAAAATTCAGAAAGGTTGAATATACAGTACAGTCAATACTAGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493328.5
CDS CAA 72 bp AACTCACATGCTCAGATCCCATCTCTTCACACAAAATaGTTAACATACGTGAATTTAATGCATTGCTCTTTA +
Preference number: 6 (lower is better)
Translates to: NSHAQIPSLHTK*LTYVNLMHCSL
Trigger: TAAAGAGCAATGCATTAAATTCACGTATGTTAACAATTTTGTGTGAAGAGATGGGATCTGAGCATGTGAGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357182.9
ENST00000493328.5