RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMYM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000147130

Ensembl transcript IDs: ENST00000314425.9, ENST00000373978.1, ENST00000373981.5, ENST00000373982.5, ENST00000373984.7, ENST00000373988.5, ENST00000373998.5, ENST00000470832.1, ENST00000489332.1

Found 1413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGTGGCGGCAGGCCCTGCGCCCACAGCTCCTCGCCTGTCCTTTaGCCACAGATCCCATCCTGCATGACTCAAGGTCCCATAGGCTTG +
Preference number: 1 (lower is better)
Translates to: GSGGRPCAHSSSPVL*PQIPSCMTQGPIGL
Trigger: CAAGCCTATGGGACCTTGAGTCATGCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAGCTGTGGGCGCAGGGCCTGCCGCCACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CCA 90 bp TTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTTG +
Preference number: 1 (lower is better)
Translates to: FLYAPKQVVLQNRFC*PSWKRSSGPGLPVL
Trigger: CAAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
3UTR GCA 90 bp AGTGGGCACAGGGCAGAGAAGGCAGCTGGGTTTTTCCCTAGGTCATaGCTAGGAACAAGAGGCTCTACCTATGCGGGATGGGTCAGGAAA +
Preference number: 1 (lower is better)
Translates to: SGHRAEKAAGFFPRS*LGTRGSTYAGWVRK
Trigger: TTTCCTGACCCATCCCGCATAGGTAGAGCCTCTTGTTCCTAGGCATGACCTAGGGAAAAACCCAGCTGCCTTCTCTGCCCTGTGCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR TCA 90 bp CACCAAGGATTGGTGCTTGCCGAGGGGGTGAGGGATATGCGGTGGTaGGATGGTGCCAACAACCAATTATTTCATAGGAGGGGAAGAGTG +
Preference number: 1 (lower is better)
Translates to: HQGLVLAEGVRDMRW*DGANNQLFHRRGRV
Trigger: CACTCTTCCCCTCCTATGAAATAATTGGTTGTTGGCACCATCTCACCACCGCATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CCA 90 bp TTCCCTAGGTCATGCCTAGGAACAAGAGGCTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAAC +
Preference number: 1 (lower is better)
Translates to: FPRSCLGTRGSTYAG*VRKPKANRITRAIN
Trigger: GTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGAGCCTCTTGTTCCTAGGCATGACCTAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR GCA 90 bp CTGGGAAACAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTaGCAGAAGCTAATTGTTTTCTGGGACCTCCAATGCAAGATGGGG +
Preference number: 1 (lower is better)
Translates to: LGNSKVNRERSGYPL*QKLIVFWDLQCKMG
Trigger: CCCCATCTTGCATTGGAGGTCCCAGAAAACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTGTTTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR TCA 90 bp CAACCCAAGTCAGAAGGTAGTTTTTGCCTTGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTACAGAGGGGGCTAAGCATGTTGACA +
Preference number: 1 (lower is better)
Translates to: QPKSEGSFCLGRSVH*TKGRQLQRGLSMLT
Trigger: TGTCAACATGCTTAGCCCCCTCTGTAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGACTTGGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CCA 90 bp AAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTCTaGACCCAGAAGGAGGGGTTTACTCTGAAGCATAAAGAAAACGGG +
Preference number: 1 (lower is better)
Translates to: KANRITRAINTPPRV*TQKEGFTLKHKENG
Trigger: CCCGTTTTCTTTATGCTTCAGAGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR TCA 90 bp GTGACAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTaGAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTAAA +
Preference number: 1 (lower is better)
Translates to: VTTASHYNTRVGMAH*RDRPGASEQYIQFK
Trigger: TTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CCA 90 bp AGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTaGCTAACTGGTGACAGTTATAAAAACACAAAAAGGAGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: RDRPGASEQYIQFKQ*LTGDSYKNTKRSLG
Trigger: TCCCAGGCTCCTTTTTGTGTTTTTATAACTGTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CAA 90 bp AGGCAGTGGCGGCAGGCCCTGCGCCCACAGCTCCTCGCCTGTCCTTaGACCACAGATCCCATCCTGCATGACTCAAGGTCCCATAGGCTT +
Preference number: 2 (lower is better)
Translates to: RQWRQALRPQLLACP*TTDPILHDSRSHRL
Trigger: AAGCCTATGGGACCTTGAGTCATGCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAGCTGTGGGCGCAGGGCCTGCCGCCACTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGAAGATGTAGGCAGTaGCGGCAGGCCCTGCGCCCA +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRRCRQ*RQALRP
Trigger: TGGGCGCAGGGCCTGCCGCCACTGCCTACATCTTCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CAA 90 bp CACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCCGGT +
Preference number: 2 (lower is better)
Translates to: HLLVRPQAGCVAEPL*LALVEEELRARTPG
Trigger: ACCGGGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373978.1
3UTR CAA 90 bp CTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTT +
Preference number: 2 (lower is better)
Translates to: LLVRPQAGCVAEPLL*ALVEEELRARTPGL
Trigger: AAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
3UTR-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGGGAGACCAGCCCCTaGGTACAGAAGACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGWETSP*VQKTRA
Trigger: GGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCTGGGCCTGTCACCCTaGGGGACATGGCCACAGGAC +
Preference number: 2 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTLGLSP*GTWPQD
Trigger: GTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCAG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCTGGGCCTGTCACCCTaGGGGACATGGCCACAGGAC +
Preference number: 2 (lower is better)
Translates to: SGNPKPTGSPELLTLHPELGLSP*GTWPQD
Trigger: GTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCAG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGGGATATGCGGTGGTaGGATGGTGCCAACAACCAA +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRDMRW*DGANNQ
Trigger: TTGGTTGTTGGCACCATCTCACCACCGCATATCCCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGAAAACGGGCAAGCTaGCTTTTGCCCATCACTGGG +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRKRAS*LLPITG
Trigger: CCCAGTGATGGGCAAAAGCCAGCTTGCCCGTTTTCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGAAGATGTAGGCAGTaGCGGCAGGCCCTGCGCCCA +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRRCRQ*RQALRP
Trigger: TGGGCGCAGGGCCTGCCGCCACTGCCTACATCTTCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCTGGGCCTGTCACCCTaGGGGACATGGCCACAGGAC +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLGLSP*GTWPQD
Trigger: GTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCAG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNGRSVH*TKGRQL
Trigger: TAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCCAAGGATTGGTGCTTaGCGAGGGGGTGAGGGATAT +
Preference number: 2 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGPRIGA*RGGEGY
Trigger: ATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCACAGATCCCATCCTaGATGACTCAAGGTCCCATA +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPQIPS*MTQGPI
Trigger: TATGGGACCTTGAGTCATGCAGGATGGGATCTGTGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCAACAGGGAAAGAAGTaGGTACCCCCTTTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNQQGKK*VPPLPE
Trigger: TTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAAGGCAGGGAATGGGTaGGCGGAAAGGAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIKAGNG*AERSSQ
Trigger: CTGACTGCTCCTTTCCGCTCACCCATTCCCTGCCTT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGAAGATGTAGGCAGTaGCGGCAGGCCCTGCGCCCA +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRRCRQ*RQALRP
Trigger: TGGGCGCAGGGCCTGCCGCCACTGCCTACATCTTCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGGGAGACCAGCCCCTaGGTACAGAAGACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSWETSP*VQKTRA
Trigger: GGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGCTTGCCGAGGGGGTaGGGGATATGCGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSCLPRG*GICGGE
Trigger: CTCACCACCGCATATCCCTCACCCCCTCGGCAAGCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCGGTGGTGAGATGGTaGCAACAACCAATTATTTCA +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNAVVRW*QQPIIS
Trigger: TGAAATAATTGGTTGTTGGCACCATCTCACCACCGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCCAAGGATTGGTGCTTaGCGAGGGGGTGAGGGATAT +
Preference number: 2 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVPRIGA*RGGEGY
Trigger: ATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAAGGGGACAGGAGTCTaGACAACAGGAGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIKGTGV*TTGVCS
Trigger: GGAGCAGACTCCTGTTGTGCAGACTCCTGTCCCCTT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGTGGGTACCCCCTTTaGCAGAAGCTAATTGTTTTC +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSGYPL*QKLIVF
Trigger: GAAAACAATTAGCTTCTGGCAAAGGGGGTACCCACT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCATGGCAACCTAAGATaGCAGAGAGACAAACACAGA +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNHGNLR*QRDKHR
Trigger: TCTGTGTTTGTCTCTCTGCCATCTTAGGTTGCCATG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CAA 90 bp AGAGGGGAACCCAGCCTCAACCCAAGTCAGAAGGTAGTTTTTGCCTaGGGAGGTCTGTCCATTGAACTAAAGGGAGGCAGTTACAGAGGG +
Preference number: 2 (lower is better)
Translates to: RGEPSLNPSQKVVFA*GGLSIELKGGSYRG
Trigger: CCCTCTGTAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGACTTGGGTTGAGGCTGGGTTCCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCAGGGCCCTTCAGAATaGGTAGCATTGGTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEQGPSE*VALVPG
Trigger: CCCAGGAACCAATGCTACTCATTCTGAAGGGCCCTG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAAGGCAGGGAATGGGTaGGCGGAAAGGAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCKAGNG*AERSSQ
Trigger: CTGACTGCTCCTTTCCGCTCACCCATTCCCTGCCTT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGGGAGACCAGCCCCTaGGTACAGAAGACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDWETSP*VQKTRA
Trigger: GGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAAGAGGCTCTACCTATaGGGGATGGGTCAGGAAACC +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIKRLYL*GMGQET
Trigger: GGTTTCCTGACCCATCCCGCATAGGTAGAGCCTCTT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGCACAACAGGAGTCTaGTCCCCGTACTTAGTCATT +
Preference number: 2 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGCTTGV*SPYLVI
Trigger: AATGACTAAGTACGGGGAGCAGACTCCTGTTGTGCA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGTAGCATTGGTTCCTaGGCCTGTCACCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESSIGS*ACHPEG
Trigger: TCCCTCAGGGTGACAGGCCCAGGAACCAATGCTACT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAAGACCAGGGCCCCATaGTTGTCAAGTGGTACGGAA +
Preference number: 2 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTKTRAP*LSSGTE
Trigger: TTCCGTACCACTTGACAACCATGGGGCCCTGGTCTT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSTYAG*VRKPKA
Trigger: GGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTATGCGGTGGTGAGATaGTGCCAACAACCAATTATT +
Preference number: 2 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNYAVVR*CQQPII
Trigger: AATAATTGGTTGTTGGCACCATCTCACCACCGCATA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGRSVH*TKGRQL
Trigger: TAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCCAAGGATTGGTGCTTaGCGAGGGGGTGAGGGATAT +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCPRIGA*RGGEGY
Trigger: ATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGTGGGTACCCCCTTTaGCAGAAGCTAATTGTTTTC +
Preference number: 2 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSGYPL*QKLIVF
Trigger: GAAAACAATTAGCTTCTGGCAAAGGGGGTACCCACT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGTAGCATTGGTTCCTaGGCCTGTCACCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSSIGS*ACHPEG
Trigger: TCCCTCAGGGTGACAGGCCCAGGAACCAATGCTACT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTACTCCACCCAGAGTCTaGACCCAGAAGGAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCTPPRV*TQKEGF
Trigger: AAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCTTTTGGCATGGTGCTaGGGAAGAGTAGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLLAWC*GRVEKG
Trigger: TCCCTTCTCTACTCTTCCCCAGCACCATGCCAAAAG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCAACAGGGAAAGAAGTaGGTACCCCCTTTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIQQGKK*VPPLPE
Trigger: TTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGGAGGGGTTTACTCTaGAGCATAAAGAAAACGGGC +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRRGLL*SIKKTG
Trigger: GCCCGTTTTCTTTATGCTTCAGAGTAAACCCCTCCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTGCACAACAGGAGTCTaGTCCCCGTACTTAGTCATT +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTICTTGV*SPYLVI
Trigger: AATGACTAAGTACGGGGAGCAGACTCCTGTTGTGCA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAAGGGGACAGGAGTCTaGACAACAGGAGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSKGTGV*TTGVCS
Trigger: GGAGCAGACTCCTGTTGTGCAGACTCCTGTCCCCTT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGAAAACGGGCAAGCTaGCTTTTGCCCATCACTGGG +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRKRAS*LLPITG
Trigger: CCCAGTGATGGGCAAAAGCCAGCTTGCCCGTTTTCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSTYAG*VRKPKA
Trigger: GGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCAGGGCCCTTCAGAATaGGTAGCATTGGTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDQGPSE*VALVPG
Trigger: CCCAGGAACCAATGCTACTCATTCTGAAGGGCCCTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTTTTCCCTAGGTCATaGCTAGGAACAAGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIFFPRS*LGTRGS
Trigger: AGAGCCTCTTGTTCCTAGGCATGACCTAGGGAAAAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGACCTTTTGGCATGGTaGTGGGGAAGAGTAGAGAAG +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCDLLAW*WGRVEK
Trigger: CTTCTCTACTCTTCCCCAGCACCATGCCAAAAGGTC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGCGGTGGTGAGATGGTaGCAACAACCAATTATTTCA +
Preference number: 2 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVAVVRW*QQPIIS
Trigger: TGAAATAATTGGTTGTTGGCACCATCTCACCACCGC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTCAGAAGGTAGTTTTTaGCTTGGGAGGTCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISEGSF*LGRSVH
Trigger: ATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCCACAGATCCCATCCTaGATGACTCAAGGTCCCATA +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCPQIPS*MTQGPI
Trigger: TATGGGACCTTGAGTCATGCAGGATGGGATCTGTGG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSTYAG*VRKPKA
Trigger: GGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCATGGCAACCTAAGATaGCAGAGAGACAAACACAGA +
Preference number: 2 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIHGNLR*QRDKHR
Trigger: TCTGTGTTTGTCTCTCTGCCATCTTAGGTTGCCATG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSGRSVH*TKGRQL
Trigger: TAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAAGAGGCTCTACCTATaGGGGATGGGTCAGGAAACC +
Preference number: 2 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDKRLYL*GMGQET
Trigger: GGTTTCCTGACCCATCCCGCATAGGTAGAGCCTCTT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGAAAACGGGCAAGCTaGCTTTTGCCCATCACTGGG +
Preference number: 2 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDRKRAS*LLPITG
Trigger: CCCAGTGATGGGCAAAAGCCAGCTTGCCCGTTTTCT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSTYAG*VRKPKA
Trigger: GGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTCAGATAAGACCTTTTaGCATGGTGCTGGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSDKTF*HGAGEE
Trigger: CTCTTCCCCAGCACCATGCCAAAAGGTCTTATCTGA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAAGGCAGGGAATGGGTaGGCGGAAAGGAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQKAGNG*AERSSQ
Trigger: CTGACTGCTCCTTTCCGCTCACCCATTCCCTGCCTT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAAGGCAGGGAATGGGTaGGCGGAAAGGAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYKAGNG*AERSSQ
Trigger: CTGACTGCTCCTTTCCGCTCACCCATTCCCTGCCTT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGGAGGGGTTTACTCTaGAGCATAAAGAAAACGGGC +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRRGLL*SIKKTG
Trigger: GCCCGTTTTCTTTATGCTTCAGAGTAAACCCCTCCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTTTTTCCCTAGGTCATaGCTAGGAACAAGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCFFPRS*LGTRGS
Trigger: AGAGCCTCTTGTTCCTAGGCATGACCTAGGGAAAAA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGCGGTGGTGAGATGGTaGCAACAACCAATTATTTCA +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSAVVRW*QQPIIS
Trigger: TGAAATAATTGGTTGTTGGCACCATCTCACCACCGC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCAAGGATTGGTGCTTaGCGAGGGGGTGAGGGATAT +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPRIGA*RGGEGY
Trigger: ATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTCAGAAGGTAGTTTTTaGCTTGGGAGGTCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSEGSF*LGRSVH
Trigger: ATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGTAGCATTGGTTCCTaGGCCTGTCACCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSSIGS*ACHPEG
Trigger: TCCCTCAGGGTGACAGGCCCAGGAACCAATGCTACT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCAGATAAGACCTTTTaGCATGGTGCTGGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSDKTF*HGAGEE
Trigger: CTCTTCCCCAGCACCATGCCAAAAGGTCTTATCTGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAAGAGGCTCTACCTATaGGGGATGGGTCAGGAAACC +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQKRLYL*GMGQET
Trigger: GGTTTCCTGACCCATCCCGCATAGGTAGAGCCTCTT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAAGACCAGGGCCCCATaGTTGTCAAGTGGTACGGAA +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQKTRAP*LSSGTE
Trigger: TTCCGTACCACTTGACAACCATGGGGCCCTGGTCTT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGAAAACGGGCAAGCTaGCTTTTGCCCATCACTGGG +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRKRAS*LLPITG
Trigger: CCCAGTGATGGGCAAAAGCCAGCTTGCCCGTTTTCT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGACCTTTTGGCATGGTaGTGGGGAAGAGTAGAGAAG +
Preference number: 2 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYDLLAW*WGRVEK
Trigger: CTTCTCTACTCTTCCCCAGCACCATGCCAAAAGGTC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCACAGATCCCATCCTaGATGACTCAAGGTCCCATA +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPQIPS*MTQGPI
Trigger: TATGGGACCTTGAGTCATGCAGGATGGGATCTGTGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACTTTTGGCATGGTGCTaGGGAAGAGTAGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLLAWC*GRVEKG
Trigger: TCCCTTCTCTACTCTTCCCCAGCACCATGCCAAAAG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTATGCGGTGGTGAGATaGTGCCAACAACCAATTATT +
Preference number: 2 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDYAVVR*CQQPII
Trigger: AATAATTGGTTGTTGGCACCATCTCACCACCGCATA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATATGCGGTGGTGAGATaGTGCCAACAACCAATTATT +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQYAVVR*CQQPII
Trigger: AATAATTGGTTGTTGGCACCATCTCACCACCGCATA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATGTGTTTTATGTAAATaGTCCCCTCATCGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQCVLCK*SPHRFH
Trigger: ATGAAAGCGATGAGGGGACCATTTACATAAAACACA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR TCA 72 bp GGCAGGCCCTGCGCCCACAGCTCCTCGCCTGTCCTTTaGCCACAGATCCCATCCTGCATGACTCAAGGTCCC +
Preference number: 3 (lower is better)
Translates to: GRPCAHSSSPVL*PQIPSCMTQGP
Trigger: GGGACCTTGAGTCATGCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAGCTGTGGGCGCAGGGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CCA 72 bp GCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTC +
Preference number: 3 (lower is better)
Translates to: APKQVVLQNRFC*PSWKRSSGPGL
Trigger: GAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
3UTR CCA 72 bp CAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTTG +
Preference number: 3 (lower is better)
Translates to: QVVLQNRFCWPS*KRSSGPGLPVL
Trigger: CAAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
3UTR-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCTCCTCGCCTGTCCTTaGACCACAGATCCCATCCTG +
Preference number: 3 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNLLACP*TTDPIL
Trigger: CAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCGGCAGCACCAAGGATaGGTGCTTGCCGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRQHQG*VLAEGV
Trigger: CACCCCCTCGGCAAGCACCAATCCTTGGTGCTGCCG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGGGGGCTAAGCATGTaGACACCATGGCTCATGGCA +
Preference number: 3 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRGLSM*TPWLMA
Trigger: TGCCATGAGCCATGGTGTCAACATGCTTAGCCCCCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR GCA 72 bp AGGGCAGAGAAGGCAGCTGGGTTTTTCCCTAGGTCATaGCTAGGAACAAGAGGCTCTACCTATGCGGGATGG +
Preference number: 3 (lower is better)
Translates to: RAEKAAGFFPRS*LGTRGSTYAGW
Trigger: CCATCCCGCATAGGTAGAGCCTCTTGTTCCTAGGCATGACCTAGGGAAAAACCCAGCTGCCTTCTCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACCAGGGCCCCATGGTaGTCAAGTGGTACGGAAGAA +
Preference number: 3 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTRAPW*SSGTEE
Trigger: TTCTTCCGTACCACTTGACAACCATGGGGCCCTGGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTACCAGGGCCCCATGGTaGTCAAGTGGTACGGAAGAA +
Preference number: 3 (lower is better)
Translates to: GHGSLKGQARRLRTIYTITRAPW*SSGTEE
Trigger: TTCTTCCGTACCACTTGACAACCATGGGGCCCTGGT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR TCA 72 bp GCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTaGAGGGACAGGCCAGGCGCCTCAGAACAATATATA +
Preference number: 3 (lower is better)
Translates to: ASHYNTRVGMAH*RDRPGASEQYI
Trigger: TATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CCA 72 bp TCATGCCTAGGAACAAGAGGCTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCCAACAGGATCACCAGA +
Preference number: 3 (lower is better)
Translates to: SCLGTRGSTYAG*VRKPKANRITR
Trigger: TCTGGTGATCCTGTTGGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGAGCCTCTTGTTCCTAGGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCTCCTCGCCTGTCCTTaGACCACAGATCCCATCCTG +
Preference number: 3 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLLACP*TTDPIL
Trigger: CAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAAGTGGGTACCCCCTTaGCCAGAAGCTAATTGTTTT +
Preference number: 3 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGKWVPP*PEANCF
Trigger: AAAACAATTAGCTTCTGGCAAAGGGGGTACCCACTT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACGGCAGCACCAAGGATaGGTGCTTGCCGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRQHQG*VLAEGV
Trigger: CACCCCCTCGGCAAGCACCAATCCTTGGTGCTGCCG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR TCA 72 bp TCAGAAGGTAGTTTTTGCCTTGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTACAGAGGGGGCTAAGC +
Preference number: 3 (lower is better)
Translates to: SEGSFCLGRSVH*TKGRQLQRGLS
Trigger: GCTTAGCCCCCTCTGTAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAAGGTAGTTTTTGCCTaGGGAGGTCTGTCCATTGAA +
Preference number: 3 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIKVVFA*GGLSIE
Trigger: TTCAATGGACAGACCTCCCAAGGCAAAAACTACCTT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACCAGGGCCCCATGGTaGTCAAGTGGTACGGAAGAA +
Preference number: 3 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTRAPW*SSGTEE
Trigger: TTCTTCCGTACCACTTGACAACCATGGGGCCCTGGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAAGGTAGTTTTTGCCTaGGGAGGTCTGTCCATTGAA +
Preference number: 3 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDKVVFA*GGLSIE
Trigger: TTCAATGGACAGACCTCCCAAGGCAAAAACTACCTT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAAGTGGGTACCCCCTTaGCCAGAAGCTAATTGTTTT +
Preference number: 3 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDKWVPP*PEANCF
Trigger: AAAACAATTAGCTTCTGGCAAAGGGGGTACCCACTT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: NITDTIETPFICFISPSPVAEPL*LALVEE
Trigger: CTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
3UTR-3UTR CAA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTATTTCTCCCAGCCCTaGACCCATCAGCCACCTTTA +
Preference number: 3 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNYFSQP*THQPPL
Trigger: TAAAGGTGGCTGATGGGTCAAGGGCTGGGAGAAATA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
3UTR CCA 72 bp CCAGGCGCCTCAGAACAATATATACAATTTAAACAGTaGCTAACTGGTGACAGTTATAAAAACACAAAAAGG +
Preference number: 3 (lower is better)
Translates to: PGASEQYIQFKQ*LTGDSYKNTKR
Trigger: CCTTTTTGTGTTTTTATAACTGTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGTGGGCATGGCTCACTaGAGGGACAGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPVGMAH*RDRPGA
Trigger: GGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCAC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CTCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGPTFLYAPKQVVLQNRFAGSPD*GIGRCC
Trigger: GCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC...AAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCGGGTCCCGCCCCCTaGGCGACTGTTGGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPGPAP*ATVGVV
Trigger: CACTACCCCAACAGTCGCCCAGGGGGCGGGACCCGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
3UTR CAA 72 bp CGGCAGGCCCTGCGCCCACAGCTCCTCGCCTGTCCTTaGACCACAGATCCCATCCTGCATGACTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RQALRPQLLACP*TTDPILHDSRS
Trigger: GGACCTTGAGTCATGCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAGCTGTGGGCGCAGGGCCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGTCGGGGAGGGCCAGTaGGCCCTGCCTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPVGEGQ*ALPASL
Trigger: AAGTGAAGCAGGCAGGGCTCACTGGCCCTCCCCGAC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGTTCCCTCAGGACCGTaGTCCACCTCCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPVPSGP*STSGGE
Trigger: CTCTCCCCCGGAGGTGGACCACGGTCCTGAGGGAAC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCACCACCTCAGGGGTCTaGCCCCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPTTSGV*PPGPGS
Trigger: AGAGCCTGGACCAGGGGGCCAGACCCCTGAGGTGGT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPPRCHC*PRAGPL
Trigger: GAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGGGCCAGACCGTAGTTaGGCTCAGCAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPGPDRS*AQQLSR
Trigger: CCTGCTCAGCTGCTGAGCTCAACTACGGTCTGGCCC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGAGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLQNRFCWPSWKRSSGPGGIGRC*WASYRE
Trigger: CTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCC...TCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGTTCCCTCAGGACCGTaGTCCACCTCCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNVPSGP*STSGGE
Trigger: CTCTCCCCCGGAGGTGGACCACGGTCCTGAGGGAAC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCCCCTTCCACAGCCCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTACACCACCTCAGGGGTCTaGCCCCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPFHSPLMHYSLGPTFLYTTSGV*PPGPGS
Trigger: AGAGCCTGGACCAGGGGGCCAGACCCCTGAGGTGGT...GTACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTGTGGAAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGCCCACGCCAGTGGATaGTCTCCAGCAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPAHASG*SPAASP
Trigger: AGGGGAAGCTGCTGGAGACCATCCACTGGCGTGGGC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGGACCCGTGTTGTTaGGGAGGAGTGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQDPCC*GGVWAA
Trigger: GGCAGCCCACACTCCTCCCCAACAACACGGGTCCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGAGTCTCTCCCACTaGAGGGCTAGGCGGGGCATT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQSLSH*RARRGI
Trigger: AATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTTGGTGTAGATGTAAGCCCCACACCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: EEELRARTPGLGVDVSPTPRCHC*PRAGPL
Trigger: GAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGG...TGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCCGGTACAACTAGGCTaGCTGCTCATGGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPPVQLG*LLMESR
Trigger: CCGGGACTCCATGAGCAGTCAGCCTAGTTGTACCGG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGGGAGACCAGCCCCTaGGTACAGAAGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNWETSP*VQKTRA
Trigger: GGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCATCTTGGTGCCCACTaGAGAGCGCCCGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNHLGAH*RAPGPL
Trigger: CAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPHKSSW*PLQSAR
Trigger: CCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTGGGGGATCGGGCGCTaGTGCTGGGCCTCATACAGG +
Preference number: 4 (lower is better)
Translates to: PKQVVLQNRFCWPSWKRSWGIGR*CWASYR
Trigger: CCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCA...GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGACAGCTCAGGTGAATaGCCCCCTCAGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPDSSGE*PPQGLC
Trigger: GCACAAGCCCTGAGGGGGGCATTCACCTGAGCTGTC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCTCCTTCCCTTGTCTaGAGCCACGGGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPPSLV*SHGAPK
Trigger: TTTGGGGGCCCCGTGGCTGCAGACAAGGGAAGGAGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGCCCCAGCAACTCAGTaGCTCCATCCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPAPATQ*LHPGLQ
Trigger: CTGGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AAGAACCACACCCCCTTCCACAGCCCTCTAATGCACTACTCCCTCGGCCCCACCGGCATTTGGGCTCTGTaGCTGCCCTTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTGIWAL*LPLGKL
Trigger: GAGCTTCCCCAAGGGCAGCCACAGAGCCCAAATGCC...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTGTGGAAGGGGGTGTGGTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGCACTGGCACGAAGATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPALARR*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATCTTCGTGCCAGTGC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
3UTR CAA 72 bp CGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: RPQAGCVAEPLL*ALVEEELRART
Trigger: AGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
3UTR CAA 72 bp GTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRPQAGCVAEPL*LALVEEELRAR
Trigger: CCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp GTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCAGGCTCTAGGGTCTaGTCTCCTGCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: VAEPLLLALVEEELRARTPGSRV*SPASHA
Trigger: GGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGG...AGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGCTGGTTGCAGAAATaGCGGATCTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAGATCCGTCATTTCTGCAACCAGCA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGCACCAGCCGCTTTTaGCCCTTCCTCATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSTSRF*PFLMVR
Trigger: CCGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CRTAFVGPRGRGAQGQDSPPEPV*ATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGG...GGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPPPEPV*ATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGGIGRC*WASYRE
Trigger: CTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGACAGCTCAGGTGAATaGCCCCCTCAGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNDSSGE*PPQGLC
Trigger: GCACAAGCCCTGAGGGGGGCATTCACCTGAGCTGTC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGGCACCGGGCAGCCTTaGAGTACCACAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNGTGQP*STTAGT
Trigger: AGTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCATGCAGCAGGCGCCTaGCAAGATTACCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNHAAGA*QDYPPP
Trigger: TGGGGGAGGGTAATCTTGGCAGGCGCCTGCTGCATG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGTTCCCTCAGGACCGTaGTCCACCTCCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGVPSGP*STSGGE
Trigger: CTCTCCCCCGGAGGTGGACCACGGTCCTGAGGGAAC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTAGCCCCTGGATCAGGTaGTACCACCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLMHYSLGPTFLYAPKQVSPWIR*YHLRGL
Trigger: CAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCT...AACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp GAGCTCAGGGCCAGGACTCCCGGTCTTGGTGTAGATGTAAGCCCCACACTGGTCATTTGCCCCAGCCCCTaGATCAGGTGGTACCACCTC +
Preference number: 4 (lower is better)
Translates to: ELRARTPGLGVDVSPTLVICPSP*IRWYHL
Trigger: GAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAAT...GACCAGTGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNIGRCC*ASYRER
Trigger: TCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGAT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTAGSPD*GIGRCC
Trigger: GCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVAGSPD*GIGRCC
Trigger: GCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTTGTGCGCTGGAACTTaGTCCAGCAGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNLCAGT*SSSWGC
Trigger: GCAGCCCCAGCTGCTGGACCAAGTTCCAGCGCACAA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCGACAGTGCTCACACTaGGACACCACACCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRQCSH*DTTPRS
Trigger: GCTTCGGGGTGTGGTGTCCCAGTGTGAGCACTGTCG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTCCAGCAGCTTCCCCTaGCGCTTACACGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSSSFP*RLHAWH
Trigger: GTGCCATGCGTGTAAGCGCCAGGGGAAGCTGCTGGA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCATCTGCCCACGCCAGTaGATGGTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPICPRQ*MVSSSF
Trigger: GAAGCTGCTGGAGACCATCCACTGGCGTGGGCAGAT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGGTGCCCCGAGGGGTaGTACACTTGCGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGWCPEG*YTCGTA
Trigger: GGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCCGGGTCCCGCCCCCTaGGCGACTGTTGGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTPGPAP*ATVGVV
Trigger: CACTACCCCAACAGTCGCCCAGGGGGCGGGACCCGG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
3UTR CAA 72 bp AGCCCTCTAATGCACTACTCCCTCGGCCCCACCTTCTaGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: SPLMHYSLGPTF*YAPKQVVLQNR
Trigger: GCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSGEAG*RAEELR
Trigger: CCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCCTCAGGCTTGCCACTaGAGAGGCTGTGACAGTAGT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPPQACH*RGCDSS
Trigger: ACTACTGTCACAGCCTCTTCAGTGGCAAGCCTGAGG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTCCTCGCCTGTCCTTTaGCCACAGATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSSPVL*PQIPSC
Trigger: GCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGTGGGCATGGCTCACTaGAGGGACAGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIVGMAH*RDRPGA
Trigger: GGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCAC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCAGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACTGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAGAACCACACCCCCTTCCACAGCCCTCTAATGCACTACTCCCTCGGCCCCACCCCATTGCTGACCTCGTaGAGGACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTCCTGCACGAGGTCAGCAATGG...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTGTGGAAGGGGGTGTGGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCCCCCTCAGGGCTTGTaGGCTGGAACTTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGPPQGL*AGTWSS
Trigger: GCTGGACCAAGTTCCAGCGCACAAGCCCTGAGGGGG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGCGGAGGGGATTCATaGGGTTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSGGDS*GSHAAL
Trigger: TAGAGCAGCGTGAGAACCGCATGAATCCCCTCCGCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGCTCTCCAACATGCTaGGGTCCATGGGGATCACAG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPCSPTC*GPWGSQ
Trigger: CTGTGATCCCCATGGACCGCAGCATGTTGGAGAGCA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCCAAGGATTGGTGCTTaGCGAGGGGGTGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPPRIGA*RGGEGY
Trigger: ATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCGCCCCCGTCACACCCTaGTCGCCCTACCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALAPVTP*SPYLLE
Trigger: CTCCAGGAGGTAGGGCGAGCAGGGTGTGACGGGGGC...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373978.1
ENST00000373981.5
CDS-3UTR CCA 90 bp TCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGCCCCAGCAACTCAGTaGCTCCATCCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: SAPPSCTPPSRLCCRTAFAPATQ*LHPGLQ
Trigger: CTGGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGC...AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATACCACCTCAGGGGTCTaGCCCCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDTTSGV*PPGPGS
Trigger: AGAGCCTGGACCAGGGGGCCAGACCCCTGAGGTGGT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCGCTAGGCGGGGCATTTaGGCTCTGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HLLVRPQAGCVAEPLLLAARRGI*ALWLPL
Trigger: CAAGGGCAGCCACAGAGCCCAAATGCCCCGCCTAGC...GGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQDSRS*CRCKPH
Trigger: GTGGGGCTTACATCTACACCAAGACCGGGAGTCCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCTTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CRTAFVGPRGRGAQGQDSFCWPS*KRSSGP
Trigger: TGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAA...GGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQNRFC*PSWKRS
Trigger: GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTCAGGGCTTGTGCGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSGLVR*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCGCACAAGCCCTGA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGGCGCTTACACGCATaGCACCGGGCAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGWRLHA*HRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCGTGTAAGCGCCA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGATGCATAGGCACTaGCACGAAGATGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQMHRH*HEDGHW
Trigger: CCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGGCACCGGGACTTTCTaGCAGTACAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPGTGTF*QYRCIG
Trigger: GCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGAACACCGTATTGTTaGGGAGGAGTGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPRTPYC*GGVWAA
Trigger: GGCAGCCCACACTCCTCCCCAACAATACGGTGTTCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGGATGCTCACCACCTTaGTGGTGCCCCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDGCSPP*WCPEGW
Trigger: CCACCCCTCGGGGCACCACCAAGGTGGTGAGCATCC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGTAGCATTGGTTCCTaGGCCTGTCACCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSSIGS*ACHPEG
Trigger: TCCCTCAGGGTGACAGGCCCAGGAACCAATGCTACT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCACTCCACCCAGAGTCTaGACCCAGAAGGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPTPPRV*TQKEGF
Trigger: AAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGACTGGCTCAAGAGTCTaGCCCCCGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: LCCRTAFVGPRGRGAQGQTGSRV*PPSHPA
Trigger: AGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGT...CTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp GAGCTCAGGGCCAGGACTCCCGGTCTTGGTGTAGATGTAAGCCCCACACTGGTCTGGCTGGATATGTACTaGCTCAAGAGTCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ELRARTPGLGVDVSPTLVWLDMY*LKSLAP
Trigger: GGGGGCCAGACTCTTGAGCCAGTACATATCCAGCCA...GACCAGTGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCCAGGCTCTAGGGTCTaGTCTCCTGCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGPGSRV*SPASHA
Trigger: GGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCAGAGTCTCTCCCACTaGAGGGCTAGGCGGGGCATT +
Preference number: 4 (lower is better)
Translates to: HLLVRPQAGCVAEPLLLAQSLSH*RARRGI
Trigger: AATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTG...GGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGTCGGGGAGGGCCAGTaGGCCCTGCCTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTVGEGQ*ALPASL
Trigger: AAGTGAAGCAGGCAGGGCTCACTGGCCCTCCCCGAC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCTCAGGCTTGCCACTaGAGAGGCTGTGACAGTAGT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPQACH*RGCDSS
Trigger: ACTACTGTCACAGCCTCTTCAGTGGCAAGCCTGAGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCATCCAGTTGCTCGGTaGCTCCGCGCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDHPVAR*LRAGRS
Trigger: AGACCTGCCAGCGCGGAGTCACCGAGCAACTGGATG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGACATTGGCCATCTTaGCTGCCATGGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPRHWPS*LPWPGH
Trigger: ATGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCACCATTGGGCCGAGTaGTTTCTCTCACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPHHWAE*FLSQTG
Trigger: CCCAGTTTGTGAGAGAAATCACTCGGCCCAATGGTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCTGGGCCTGTCACCCTaGGGGACATGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLGLSP*GTWPQD
Trigger: GTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCAG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTGGGAGACCAGCCCCTaGGTACAGAAGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDWETSP*VQKTRA
Trigger: GGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGGGATATGCGGTGGTaGGATGGTGCCAACAACCAA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPRDMRW*DGANNQ
Trigger: TTGGTTGTTGGCACCATCTCACCACCGCATATCCCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGTGGGCATGGCTCACTaGAGGGACAGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEVGMAH*RDRPGA
Trigger: GGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCAC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGAGTTATGGGGTATCTaGAGCTTGATCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPELWGI*SLIPSH
Trigger: GTGGCTGGGGATCAAGCTTCAGATACCCCATAACTC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAATCTCCTGCATCCCATaGCAGGGTTCCCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: VRPQAGCVAEPLLLALVEISCIP*QGSLRT
Trigger: GGTCCTGAGGGAACCCTGGCATGGGATGCAGGAGAT...TTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp GAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTTGGTGTAGATGTAAGCCCCACAAGGGGAGCCCCTTCTTaGAGTAGCTATGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: EEELRARTPGLGVDVSPTRGAPS*SSYGGG
Trigger: ACCACCTCCATAGCTACTGCAAGAAGGGGCTCCCCT...TGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTTTGGGCTCTGTGGCTaGCCTTGGGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGFGLCG*PWGSSS
Trigger: GGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCCAAA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTILSVGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLSVGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGHKSSW*PLQSAR
Trigger: CCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCTGGGGGATCGGGCGCTaGTGCTGGGCCTCATACAGG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALWGIGR*CWASYR
Trigger: CCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCA...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTGGGGGATCGGGCGCTaGTGCTGGGCCTCATACAGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTWGIGR*CWASYR
Trigger: CCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCATTGCTGACCTCGTaGAGGACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTCCTGCACGAGGTCAGCAATGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGGGCCAGTGAGCCCTaGCTGCTTCACTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPRASEP*LLHFVR
Trigger: TCTTACAAAGTGAAGCAGGCAGGGCTCACTGGCCCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGACAGCTCAGGTGAATaGCCCCCTCAGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGDSSGE*PPQGLC
Trigger: GCACAAGCCCTGAGGGGGGCATTCACCTGAGCTGTC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTTCTCCTGCCGACAGTaGTCACACTGGGACACCACA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNFSCRQ*SHWDTT
Trigger: TGTGGTGTCCCAGTGTGAGCACTGTCGGCAGGAGAA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGCAAGAGTTTCTCCTaGCGACAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPCKSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGTCGGCAGGAGAAACTCTTGCA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGCACACAGCCTTCGCTaGAGAAGCTTTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPAHSLR*RSFSPL
Trigger: GAGTGGAGAAAAGCTTCTGCAGCGAAGGCTGTGTGC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTCTTACAGTCCTCACTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSYSPH*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGTGAGGACTGTAAGA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTTCCAGGAGTCCCTCTaGACTCTGGTTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPFQESL*TLVAHK
Trigger: CTTGTGAGCAACCAGAGTGCAGAGGGACTCCTGGAA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGAGGGGTGGTACACTTaGGGGACTGCCGCACCACAT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGEGWYT*GTAAPH
Trigger: ATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTCACCACCTTGGTGGTaGCCCGAGGGGTGGTACACT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSPPWW*PEGWYT
Trigger: AGTGTACCACCCCTCGGGGCACCACCAAGGTGGTGA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAAGAGGCTCTACCTATaGGGGATGGGTCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPKRLYL*GMGQET
Trigger: GGTTTCCTGACCCATCCCGCATAGGTAGAGCCTCTT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCAAGGATTGGTGCTTaGCGAGGGGGTGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPRIGA*RGGEGY
Trigger: ATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTCCCTACCTACGCCATaGAGCAGGCGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSLPTP*SRRLPR
Trigger: TCTTGGCAGGCGCCTGCTGCATGGCGTAGGTAGGGA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: PLMHYSLGPTFLYAPKQVSQGLL*QGQWVK
Trigger: TTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCT...AACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCGAGTTGGGGCAGTCTaGGATTCCAGTAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPRVGAV*DSSRSS
Trigger: AGAGGATCTACTGGAATCCCAGACTGCCCCAACTCG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGTTCCCTCAGGACCGTaGTCCACCTCCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIVPSGP*STSGGE
Trigger: CTCTCCCCCGGAGGTGGACCACGGTCCTGAGGGAAC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCACCACCTCAGGGGTCTaGCCCCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALTTSGV*PPGPGS
Trigger: AGAGCCTGGACCAGGGGGCCAGACCCCTGAGGTGGT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACCACCTCAGGGGTCTaGCCCCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTTSGV*PPGPGS
Trigger: AGAGCCTGGACCAGGGGGCCAGACCCCTGAGGTGGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTAGTCAGGCCATCTCCTaGCAAGGAAGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VAEPLLLALVEEELRARTSQAIS*QGRMCR
Trigger: CCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACT...AGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNFCWPS*KRSSGP
Trigger: TGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTTGTGCGCTGGAACTTaGTCCAGCAGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGLCAGT*SSSWGC
Trigger: GCAGCCCCAGCTGCTGGACCAAGTTCCAGCGCACAA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGAACTGGAACACTTaGTCCTGCCAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQNWNT*SCQSKT
Trigger: GGTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTCACGGCAGCAGAACTaGAACACTTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSRQQN*NTWSCQ
Trigger: CTGGCAGGACCAAGTGTTCCAGTTCTGCTGCCGTGA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGCCCACGCCAGTGGATaGTCTCCAGCAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDAHASG*SPAASP
Trigger: AGGGGAAGCTGCTGGAGACCATCCACTGGCGTGGGC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGCACTGGCACGAAGATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGALARR*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATCTTCGTGCCAGTGC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGGTGCCCCGAGGGGTaGTACACTTGCGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVWCPEG*YTCGTA
Trigger: GGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTGGTGCCCCGAGGGGTaGTACACTTGCGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIWCPEG*YTCGTA
Trigger: GGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATACTCCACCCAGAGTCTaGACCCAGAAGGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNTPPRV*TQKEGF
Trigger: AAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGAAGATGTAGGCAGTaGCGGCAGGCCCTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDRRCRQ*RQALRP
Trigger: TGGGCGCAGGGCCTGCCGCCACTGCCTACATCTTCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCACTACAACACAAGGGTaGGCATGGCTCACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPTTTQG*AWLTEG
Trigger: CCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCCAGGCTCTAGGGTCTaGTCTCCTGCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDPGSRV*SPASHA
Trigger: GGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSGEAG*RAEELR
Trigger: CCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTPRCHC*PRAGPL
Trigger: GAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVPRCHC*PRAGPL
Trigger: GAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIPRCHC*PRAGPL
Trigger: GAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCATCCAGTTGCTCGGTaGCTCCGCGCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTHPVAR*LRAGRS
Trigger: AGACCTGCCAGCGCGGAGTCACCGAGCAACTGGATG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTTTGACTCAGGAGACTaGCTGTTCAGGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNFDSGD*LFRRLS
Trigger: CGAGAGCCTCCTGAACAGTCAGTCTCCTGAGTCAAA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGCACCAGCCGCTTTTaGCCCTTCCTCATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSTSRF*PFLMVR
Trigger: CCGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCGAGAATATCCTCTTTaGTACGCATGGGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPREYPL*YAWVWG
Trigger: GCCCCAAACCCATGCGTATCAAAGAGGATATTCTCG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGGCCAGACCGTAGTTaGGCTCAGCAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGPDRS*AQQLSR
Trigger: CCTGCTCAGCTGCTGAGCTCAACTACGGTCTGGCCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGGGCCAGACCGTAGTTaGGCTCAGCAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIGPDRS*AQQLSR
Trigger: CCTGCTCAGCTGCTGAGCTCAACTACGGTCTGGCCC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGAATTCATAGAACTTaGCAGGGCAGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPRIHRT*QGSGGD
Trigger: ATCCCCTCCGCTGCCCTGTCAAGTTCTATGAATTCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTGGGAGACCAGCCCCTaGGTACAGAAGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTWETSP*VQKTRA
Trigger: GGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGCTTGCCGAGGGGGTaGGGGATATGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVCLPRG*GICGGE
Trigger: CTCACCACCGCATATCCCTCACCCCCTCGGCAAGCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPGRSVH*TKGRQL
Trigger: TAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGAGTTATGGGGTATCTaGAGCTTGATCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNELWGI*SLIPSH
Trigger: GTGGCTGGGGATCAAGCTTCAGATACCCCATAACTC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: CVAEPLLLALVEEELRARRFWRF*SPNALA
Trigger: AGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCT...CCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPELSVGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCATCTTGGTGCCCACTaGAGAGCGCCCGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTHLGAH*RAPGPL
Trigger: CAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCATCTTGGTGCCCACTaGAGAGCGCCCGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIHLGAH*RAPGPL
Trigger: CAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNWCPAM*TSHLGA
Trigger: GGCACCAAGATGACTTGTGCACATTGCCGGACACCA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGCTGAGGCAGCCCCTTaGGCTGATAGGCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIAEAAP*ADRQSA
Trigger: GGCAGACTGCCTATCAGCGCAAGGGGCTGCCTCAGC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGCTGAGGCAGCCCCTTaGGCTGATAGGCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVAEAAP*ADRQSA
Trigger: GGCAGACTGCCTATCAGCGCAAGGGGCTGCCTCAGC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGPPEPV*ATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEGIGRC*WASYRE
Trigger: CTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAGAACCACACCCCCTTCCACAGCCCTCTAATGCACTACTCCCTCGGCCCCACCCCAAGCAGGTTGTGTTaGAGAACCGCTTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTPSRLC*RTAFVG
Trigger: GCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGG...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTGTGGAAGGGGGTGTGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCCCCCTCAGGGCTTGTaGGCTGGAACTTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIPPQGL*AGTWSS
Trigger: GCTGGACCAAGTTCCAGCGCACAAGCCCTGAGGGGG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGGCACCGGGCAGCCTTaGAGTACCACAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDGTGQP*STTAGT
Trigger: AGTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGAGACGCCCCGATTCTaGATCAGTGGCTTACACATG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNETPRF*ISGLHM
Trigger: CATGTGTAAGCCACTGATGCAGAATCGGGGCGTCTC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTTCCAGGAGTCCCTCTaGACTCTGGTTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNFQESL*TLVAHK
Trigger: CTTGTGAGCAACCAGAGTGCAGAGGGACTCCTGGAA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCATTCTTAGGGAAGTCTaGCTCCAAGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPILREV*LQVLPR
Trigger: CCTGGGCAAGACTTGGAGGCAGACTTCCCTAAGAAT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTCACCACCTTGGTGGTaGCCCGAGGGGTGGTACACT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSPPWW*PEGWYT
Trigger: AGTGTACCACCCCTCGGGGCACCACCAAGGTGGTGA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCATGCGGTTCTCACGCTaGTCTAAGATAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPMRFSR*SKIGAS
Trigger: TGAAGCCCCTATCTTAGAGCAGCGTGAGAACCGCAT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGAGGTGACTCGGCGATaGAGGACCGTTCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGEVTRR*RTVQVA
Trigger: TGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCCCGTCACACCCTaGTCGCCCTACCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTAPVTP*SPYLLE
Trigger: CTCCAGGAGGTAGGGCGAGCAGGGTGTGACGGGGGC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373978.1
ENST00000373981.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGGCCCATCCTCGAGTTaGGGCAGTCTGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDGPSSS*GSLGFQ
Trigger: CTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGCCCCTGGATCAGGTaGTACCACCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSPWIR*YHLRGL
Trigger: CAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCGCTAGGCGGGGCATTTaGGCTCTGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALARRGI*ALWLPL
Trigger: CAAGGGCAGCCACAGAGCCCAAATGCCCCGCCTAGC...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGCTAGGCGGGGCATTTaGGCTCTGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTARRGI*ALWLPL
Trigger: CAAGGGCAGCCACAGAGCCCAAATGCCCCGCCTAGC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGTGCACAAGTCATCTTaGTGCCCACTGCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGVHKSS*CPLQSA
Trigger: GGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCAC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDIGRCC*ASYRER
Trigger: TCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGAT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPCWPGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AAGAACCACACCCCCTTCCACAGCCCTCTAATGCACTACTCCCTCGGCCCCACCTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTCWPGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTGTGGAAGGGGGTGTGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGCAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LCCRTAFVGPRGRGAQGQQNRFC*PSWKRS
Trigger: GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTG...CTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTGTGCGCTGGAACTTaGTCCAGCAGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLCAGT*SSSWGC
Trigger: GCAGCCCCAGCTGCTGGACCAAGTTCCAGCGCACAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTCTGGGTATCCAGGTTaGGTTGGTTCTGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSGYPG*VGSAGY
Trigger: ATAGCCAGCAGAACCAACCCAACCTGGATACCCAGA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCTCTCGGGCCCACTCTaGGTATCCAGGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLSGPL*VSRLGW
Trigger: CCAACCCAACCTGGATACCCAGAGTGGGCCCGAGAG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCCGATTCTGCATCAGTaGCTTACACATGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPPILHQ*LTHGSL
Trigger: AAGGCTGCCATGTGTAAGCCACTGATGCAGAATCGG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGCACGATCACCTGTaGCTTCCACTCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQHDHL*LPLFCL
Trigger: CAAACAGAAGAGTGGAAGCCACAGGTGATCGTGCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCTTTTGGCATGGTGCTaGGGAAGAGTAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPLLAWC*GRVEKG
Trigger: TCCCTTCTCTACTCTTCCCCAGCACCATGCCAAAAG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGAAGATGTAGGCAGTaGCGGCAGGCCCTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRRCRQ*RQALRP
Trigger: TGGGCGCAGGGCCTGCCGCCACTGCCTACATCTTCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCAGAGTCTCTCCCACTaGAGGGCTAGGCGGGGCATT +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALQSLSH*RARRGI
Trigger: AATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCAGAGTCTCTCCCACTaGAGGGCTAGGCGGGGCATT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTQSLSH*RARRGI
Trigger: AATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGGTCTGAGAACTGTTaGTTCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNWSENC*FHPPES
Trigger: AGACTCTGGGGGATGGAATCAACAGTTCTCAGACCA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGCAGTAAGTACAAGTaGTACAGCACAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSSKYK*YSTSPA
Trigger: AGCTGGGCTTGTGCTGTATCACTTGTACTTACTGCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPFSTLV*EGVWGF
Trigger: AAAACCCCAGACACCCTCTCAAACCAAAGTGGAGAA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGGGAGCAGTGGGAGCTaGTCGGGTCTTCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIGSSGS*SGLHRD
Trigger: ATCCCTGTGAAGACCCGATCAGCTCCCACTGCTCCC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGGGAGCAGTGGGAGCTaGTCGGGTCTTCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTGSSGS*SGLHRD
Trigger: ATCCCTGTGAAGACCCGATCAGCTCCCACTGCTCCC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGGAGCAGTGGGAGCTaGTCGGGTCTTCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGSSGS*SGLHRD
Trigger: ATCCCTGTGAAGACCCGATCAGCTCCCACTGCTCCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTCCATTGGCATATTTTaGCTGCACCCAGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSIGIF*LHPALP
Trigger: TGGAAGTGCTGGGTGCAGTCAAAATATGCCAATGGA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGGGCCAGACCGTAGTTaGGCTCAGCAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEGPDRS*AQQLSR
Trigger: CCTGCTCAGCTGCTGAGCTCAACTACGGTCTGGCCC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGCTTGCCGAGGGGGTaGGGGATATGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECLPRG*GICGGE
Trigger: CTCACCACCGCATATCCCTCACCCCCTCGGCAAGCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTCCTCGCCTGTCCTTTaGCCACAGATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSSPVL*PQIPSC
Trigger: GCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTTGGTGTAGATGTAAGCCCCACAATTTCTCCCAGCCCTTaGCCCATCAGCCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: EEELRARTPGLGVDVSPTISPSP*PISHLY
Trigger: ATAAAGGTGGCTGATGGGTCAAGGGCTGGGAGAAAT...TGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGGGGAGCCCCTTCTTaGAGTAGCTATGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRGAPS*SSYGGG
Trigger: ACCACCTCCATAGCTACTGCAAGAAGGGGCTCCCCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTTTGGGCTCTGTGGCTaGCCTTGGGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTFGLCG*PWGSSS
Trigger: GGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCCAAA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTTGGGCTCTGTGGCTaGCCTTGGGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFGLCG*PWGSSS
Trigger: GGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCCAAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALHKSSW*PLQSAR
Trigger: CCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTHKSSW*PLQSAR
Trigger: CCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTAGAGACAGACGGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PLMHYSLGPTFLYAPKQVRDRRM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCT...AACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQGIGRC*WASYRE
Trigger: CTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGTGGGGGATCGGGCGCTaGTGCTGGGCCTCATACAGG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQWGIGR*CWASYR
Trigger: CCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCA...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGGGTCCTCACTGTGTTaGTGTTCTCCACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPGSSLC*CSPLWF
Trigger: AAACCAAAGTGGAGAACAGCAACACAGTGAGGACCC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCTCTGCAATCATTTCTaGCATAGCCAGGATGTCGGC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNLCNHF*HSQDVG
Trigger: GCCGACATCCTGGCTATGGCAGAAATGATTGCAGAG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCAGCTCATCACCCTTaGTGGTTTCTCCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNAAHHP*WFLHWH
Trigger: ATGCCAATGGAGAAACCAGCAAGGGTGATGAGCTGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGAGGGGTGGTACACTTaGGGGACTGCCGCACCACAT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVEGWYT*GTAAPH
Trigger: ATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGAGGGGTGGTACACTTaGGGGACTGCCGCACCACAT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTEGWYT*GTAAPH
Trigger: ATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDGHSSG*SPPWWC
Trigger: GCACCACCAAGGTGGTGAGCATCCGCTACTATGCCC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGACCTTTTGGCATGGTaGTGGGGAAGAGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNDLLAW*WGRVEK
Trigger: CTTCTCTACTCTTCCCCAGCACCATGCCAAAAGGTC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGCCCATCCTCGAGTTaGGGCAGTCTGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGPSSS*GSLGFQ
Trigger: CTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGGCCCATCCTCGAGTTaGGGCAGTCTGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTGPSSS*GSLGFQ
Trigger: CTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGCCCCAGCAACTCAGTaGCTCCATCCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTAPATQ*LHPGLQ
Trigger: CTGGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGTTCCCTCAGGACCGTaGTCCACCTCCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTVPSGP*STSGGE
Trigger: CTCTCCCCCGGAGGTGGACCACGGTCCTGAGGGAAC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGTTCCCTCAGGACCGTaGTCCACCTCCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQVPSGP*STSGGE
Trigger: CTCTCCCCCGGAGGTGGACCACGGTCCTGAGGGAAC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGCCCCTGGATCAGGTaGTACCACCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISPWIR*YHLRGL
Trigger: CAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCAGCCCCTGGATCAGGTaGTACCACCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALSPWIR*YHLRGL
Trigger: CAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGCCCCTGGATCAGGTaGTACCACCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSPWIR*YHLRGL
Trigger: CAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATATTTGCCCCAGCCCCTaGATCAGGTGGTACCACCTC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDICPSP*IRWYHL
Trigger: GAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAAT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGGCATTTGGGCTCTGTaGCTGCCCTTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTGIWAL*LPLGKL
Trigger: GAGCTTCCCCAAGGGCAGCCACAGAGCCCAAATGCC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCGGCATTTGGGCTCTGTaGCTGCCCTTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALGIWAL*LPLGKL
Trigger: GAGCTTCCCCAAGGGCAGCCACAGAGCCCAAATGCC...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNDVQNS*KEPPEP
Trigger: TGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALIGRCC*ASYRER
Trigger: TCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGAT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIIGRCC*ASYRER
Trigger: TCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGAT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDAGSPD*GIGRCC
Trigger: GCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNTSPVF*HMLQRV
Trigger: TACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPFSVPC*PGIWRS
Trigger: GCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGQDSRS*CRCKPH
Trigger: GTGGGGCTTACATCTACACCAAGACCGGGAGTCCTG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGTWSSS*GCRTGR
Trigger: TCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCGACAGTGCTCACACTaGGACACCACACCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRQCSH*DTTPRS
Trigger: GCTTCGGGGTGTGGTGTCCCAGTGTGAGCACTGTCG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTCCAGCAGCTTCCCCTaGCGCTTACACGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISSSFP*RLHAWH
Trigger: GTGCCATGCGTGTAAGCGCCAGGGGAAGCTGCTGGA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGCCCACGCCAGTGGATaGTCTCCAGCAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEAHASG*SPAASP
Trigger: AGGGGAAGCTGCTGGAGACCATCCACTGGCGTGGGC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATATCTGCCCACGCCAGTaGATGGTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDICPRQ*MVSSSF
Trigger: GAAGCTGCTGGAGACCATCCACTGGCGTGGGCAGAT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGCTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNCCSPL*FERVSG
Trigger: CCCAGACACCCTCTCAAACCAAAGTGGAGAACAGCA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGAGGGGTGGGAGCAGTaGGAGCTGATCGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVEGWEQ*ELIGSS
Trigger: TGAAGACCCGATCAGCTCCCACTGCTCCCACCCCTC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGAGGGGTGGGAGCAGTaGGAGCTGATCGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTEGWEQ*ELIGSS
Trigger: TGAAGACCCGATCAGCTCCCACTGCTCCCACCCCTC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCGATTCTGCATCAGTaGCTTACACATGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPILHQ*LTHGSL
Trigger: AAGGCTGCCATGTGTAAGCCACTGATGCAGAATCGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGGCACCGGGACTTTCTaGCAGTACAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGGTGTF*QYRCIG
Trigger: GCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTTTGACCCTTCCTCATaGTTCGGGGAAGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPFDPSS*FGEGLV
Trigger: AACAAGACCTTCCCCGAACCATGAGGAAGGGTCAAA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGCTCACCACCTTGGTaGTGCCCCGAGGGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECSPPW*CPEGWY
Trigger: GTACCACCCCTCGGGGCACCACCAAGGTGGTGAGCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGTAGCATTGGTTCCTaGGCCTGTCACCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSSIGS*ACHPEG
Trigger: TCCCTCAGGGTGACAGGCCCAGGAACCAATGCTACT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTCAGATAAGACCTTTTaGCATGGTGCTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSDKTF*HGAGEE
Trigger: CTCTTCCCCAGCACCATGCCAAAAGGTCTTATCTGA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATACACAAGGGTGGGCATaGCTCACTGAAGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDTQGWA*LTEGTG
Trigger: GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCGGGTTAAATGGCTCTaGCTCAGTGGCAACGCCTGT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRVKWL*LSGNAC
Trigger: ACAGGCGTTGCCACTGAGCCAGAGCCATTTAACCCG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCTGGCTCAAGAGTCTaGCCCCCGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPGSRV*PPSHPA
Trigger: AGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAATCACTGGGGTCCATaGGTATGGCTGGATATGTAC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNNHWGP*VWLDMY
Trigger: GTACATATCCAGCCATACTCATGGACCCCAGTGATT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALSGEAG*RAEELR
Trigger: CCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTCTTGGAGAAAGTGGTaGGGCAGGATGACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSWRKW*GRMTSR
Trigger: TCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGCTGGTTGCAGAAATaGCGGATCTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAGATCCGTCATTTCTGCAACCAGCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTTTGACTCAGGAGACTaGCTGTTCAGGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGFDSGD*LFRRLS
Trigger: CGAGAGCCTCCTGAACAGTCAGTCTCCTGAGTCAAA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGCACCAGCCGCTTTTaGCCCTTCCTCATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSTSRF*PFLMVR
Trigger: CCGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCGGTACAACTAGGCTaGCTGCTCATGGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPVQLG*LLMESR
Trigger: CCGGGACTCCATGAGCAGTCAGCCTAGTTGTACCGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGAATACCAGAGAGGTaGCTCGGCGATGCAGGACCG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRIPER*LGDAGP
Trigger: CGGTCCTGCATCGCCGAGTCACCTCTCTGGTATTCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCTGGGCCTGTCACCCTaGGGGACATGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSLGLSP*GTWPQD
Trigger: GTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCAG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCAGGGCCCTTCAGAATaGGTAGCATTGGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDQGPSE*VALVPG
Trigger: CCCAGGAACCAATGCTACTCATTCTGAAGGGCCCTG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGGAGGGGTTTACTCTaGAGCATAAAGAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRRGLL*SIKKTG
Trigger: GCCCGTTTTCTTTATGCTTCAGAGTAAACCCCTCCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTGCTTGCCGAGGGGGTaGGGGATATGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCCLPRG*GICGGE
Trigger: CTCACCACCGCATATCCCTCACCCCCTCGGCAAGCA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCTGGGATCTTCTCCCTaGGTCTTCCTGCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLGSSP*VFLQEL
Trigger: GAGCTCCTGCAGGAAGACTCAGGGAGAAGATCCCAG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTATCTCCTGCATCCCATaGCAGGGTTCCCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTISCIP*QGSLRT
Trigger: GGTCCTGAGGGAACCCTGGCATGGGATGCAGGAGAT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCATCTCCTGCATCCCATaGCAGGGTTCCCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVISCIP*QGSLRT
Trigger: GGTCCTGAGGGAACCCTGGCATGGGATGCAGGAGAT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRFWRF*SPNALA
Trigger: AGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSLSVGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGCAGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACTGC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGCAGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACTGC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGCTGAGGCAGCCCCTTaGGCTGATAGGCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCAEAAP*ADRQSA
Trigger: GGCAGACTGCCTATCAGCGCAAGGGGCTGCCTCAGC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCTGAGGCAGCCCCTTaGGCTGATAGGCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTAEAAP*ADRQSA
Trigger: GGCAGACTGCCTATCAGCGCAAGGGGCTGCCTCAGC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGCTGAGGCAGCCCCTTaGGCTGATAGGCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQAEAAP*ADRQSA
Trigger: GGCAGACTGCCTATCAGCGCAAGGGGCTGCCTCAGC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALPPEPV*ATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCCATTGCTGACCTCGTaGAGGACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTCCTGCACGAGGTCAGCAATGG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGCAGAAGTCCCAGGTaGTGCCATCCAGTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVCRSPR*CHPVAR
Trigger: CCGAGCAACTGGATGGCAGCACCTGGGACTTCTGCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGGCACCGGGCAGCCTTaGAGTACCACAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEGTGQP*STTAGT
Trigger: AGTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGGGTCCTCACTGTGTTaGTGTTCTCCACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNGSSLC*CSPLWF
Trigger: AAACCAAAGTGGAGAACAGCAACACAGTGAGGACCC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGAGACGCCCCGATTCTaGATCAGTGGCTTACACATG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGETPRF*ISGLHM
Trigger: CATGTGTAAGCCACTGATGCAGAATCGGGGCGTCTC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCACTTCATCTCCACCTTaGAGGAGACGCCCCGATTCT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGTSSPP*RRRPDS
Trigger: AGAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGTACACTTGCGGGACTaGCGCACCACATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDVHLRD*RTTLVK
Trigger: CTTCACCAATGTGGTGCGGCAGTCCCGCAAGTGTAC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTCACCACCTTGGTGGTaGCCCGAGGGGTGGTACACT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESPPWW*PEGWYT
Trigger: AGTGTACCACCCCTCGGGGCACCACCAAGGTGGTGA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGHSSG*SPPWWC
Trigger: GCACCACCAAGGTGGTGAGCATCCGCTACTATGCCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGGTAGAACACATCGTTaGGAGTCCGGAGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGGRTHR*ESGGFQ
Trigger: CTGAAAGCCTCCGGACTCGCAACGATGTGTTCTACC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGAGGTGACTCGGCGATaGAGGACCGTTCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIEVTRR*RTVQVA
Trigger: TGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGAGGTGACTCGGCGATaGAGGACCGTTCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTEVTRR*RTVQVA
Trigger: TGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTGCTCTCCAACATGCTaGGGTCCATGGGGATCACAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDCSPTC*GPWGSQ
Trigger: CTGTGATCCCCATGGACCGCAGCATGTTGGAGAGCA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGCACAACAGGAGTCTaGTCCCCGTACTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNCTTGV*SPYLVI
Trigger: AATGACTAAGTACGGGGAGCAGACTCCTGTTGTGCA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGCAGTAACCGTTACTaGTTGATGACCCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNCSNRY*LMTPKP
Trigger: TGGTTTGGGGGTCATCAAGCAGTAACGGTTACTGCA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGCCCCAGCAACTCAGTaGCTCCATCCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEAPATQ*LHPGLQ
Trigger: CTGGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGCCCCTGGATCAGGTaGTACCACCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESPWIR*YHLRGL
Trigger: CAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTATTTGCCCCAGCCCCTaGATCAGGTGGTACCACCTC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIICPSP*IRWYHL
Trigger: GAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAAT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPLLFNM*GLQCYW
Trigger: CCAATAACACTGCAGTCCCCACATATTGAAGAGGAG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFCWPS*KRSSGP
Trigger: TGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGGGAACAGAACAAGCTaGTCTTGCCATTACGATCCA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNGNRTS*SCHYDP
Trigger: TGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTCAGGGCTTGTGCGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSGLVR*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCGCACAAGCCCTGA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTGGCGCTTACACGCATaGCACCGGGCAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCWRLHA*HRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCGTGTAAGCGCCA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTCCAGCAGCTTCCCCTaGCGCTTACACGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESSSFP*RLHAWH
Trigger: GTGCCATGCGTGTAAGCGCCAGGGGAAGCTGCTGGA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTATCTGCCCACGCCAGTaGATGGTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTICPRQ*MVSSSF
Trigger: GAAGCTGCTGGAGACCATCCACTGGCGTGGGCAGAT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSPSAL*LLTRSQ
Trigger: TTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTTCCTCTGGCGGACTaGGGCATAGTAGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFPLAD*GIVADA
Trigger: AGCATCCGCTACTATGCCCCAGTCCGCCAGAGGAAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATACTCCACCCAGAGTCTaGACCCAGAAGGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDTPPRV*TQKEGF
Trigger: AAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSTYAG*VRKPKA
Trigger: GGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCACTACAACACAAGGGTaGGCATGGCTCACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGTTTQG*AWLTEG
Trigger: CCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCACAGGTCGGGTTAAATaGCTCTGGCTCAGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGTGRVK*LWLSGN
Trigger: GTTGCCACTGAGCCAGAGCCATTTAACCCGACCTGT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCTCCTCTCATTCAAATaGTTCCCGGTCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLLSFK*FPVPSP
Trigger: GGGGGAGGGGACCGGGAACCATTTGAATGAGAGGAG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCAATCACTGGGGTCCATaGGTATGGCTGGATATGTAC +
Preference number: 4 (lower is better)
Translates to: PKQVVLQNRFCWPSWKRSNHWGP*VWLDMY
Trigger: GTACATATCCAGCCATACTCATGGACCCCAGTGATT...GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCAGGCTCTAGGGTCTaGTCTCCTGCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQPGSRV*SPASHA
Trigger: GGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACACCAGGCTCTAGGGTCTaGTCTCCTGCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTPGSRV*SPASHA
Trigger: GGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGG...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACACAGAGTCTCTCCCACTaGAGGGCTAGGCGGGGCATT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTQSLSH*RARRGI
Trigger: AATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTG...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTCTTGGAGAAAGTGGTaGGGCAGGATGACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSWRKW*GRMTSR
Trigger: TCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGGGTGTCTGGGGTTTTaGCTCAGGAGACTGACTGTT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDGCLGF*LRRLTV
Trigger: AACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGGGAGCAGTGGGAGCTaGTCGGGTCTTCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCGSSGS*SGLHRD
Trigger: ATCCCTGTGAAGACCCGATCAGCTCCCACTGCTCCC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTTCCACTCTTCTGTTTaGCTTCCTTTGGACTTCATC +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPFHSSV*LPLDFI
Trigger: GATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGCATTGACACCATATaGATAGTTGAGCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSIDTI*IVEPGT
Trigger: TGTACCGGGCTCAACTATTCATATGGTGTCAATGCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCGAGAATATCCTCTTTaGTACGCATGGGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGREYPL*YAWVWG
Trigger: GCCCCAAACCCATGCGTATCAAAGAGGATATTCTCG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGAATTCATAGAACTTaGCAGGGCAGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRIHRT*QGSGGD
Trigger: ATCCCCTCCGCTGCCCTGTCAAGTTCTATGAATTCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGAATACCAGAGAGGTaGCTCGGCGATGCAGGACCG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERIPER*LGDAGP
Trigger: CGGTCCTGCATCGCCGAGTCACCTCTCTGGTATTCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCAGGGCCCTTCAGAATaGGTAGCATTGGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTQGPSE*VALVPG
Trigger: CCCAGGAACCAATGCTACTCATTCTGAAGGGCCCTG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGGRSVH*TKGRQL
Trigger: TAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTCCTCGCCTGTCCTTTaGCCACAGATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESSPVL*PQIPSC
Trigger: GCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGCCCACTCTACCCGTaGTCCCCTCCTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISPLYP*SPPLIQ
Trigger: TTGAATGAGAGGAGGGGATCACGGGTAGAGTGGGCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGCCCACTCTACCCGTaGTCCCCTCCTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSPLYP*SPPLIQ
Trigger: TTGAATGAGAGGAGGGGATCACGGGTAGAGTGGGCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGATCTCCTGCATCCCATaGCAGGGTTCCCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEISCIP*QGSLRT
Trigger: GGTCCTGAGGGAACCCTGGCATGGGATGCAGGAGAT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATTTGGGCTCTGTGGCTaGCCTTGGGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTFGLCG*PWGSSS
Trigger: GGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCCAAA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGTTTGGGCTCTGTGGCTaGCCTTGGGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQFGLCG*PWGSSS
Trigger: GGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCCAAA...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTTTGGGCTCTGTGGCTaGCCTTGGGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCFGLCG*PWGSSS
Trigger: GGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCCAAA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQHKSSW*PLQSAR
Trigger: CCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGCAGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACTGC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGCTGAGGCAGCCCCTTaGGCTGATAGGCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSAEAAP*ADRQSA
Trigger: GGCAGACTGCCTATCAGCGCAAGGGGCTGCCTCAGC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGGGGGATCGGGCGCTaGTGCTGGGCCTCATACAGG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDWGIGR*CWASYR
Trigger: CCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCCATTGCTGACCTCGTaGAGGACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTCCTGCACGAGGTCAGCAATGG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGAAGCAAGAATCGCTaGAGAGCCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRSKNR*RAGVPR
Trigger: GCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGAACTGGTAGACTGTaGGGTCAACCTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRTGRL*GQPCCS
Trigger: ACTACAACAAGGTTGACCGCACAGTCTACCAGTTCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTCTCCTGCCGACAGTaGTCACACTGGGACACCACA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFSCRQ*SHWDTT
Trigger: TGTGGTGTCCCAGTGTGAGCACTGTCGGCAGGAGAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAATCGGAGTTTCTCATaGAAGAGTTTCTCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNNRSFS*KSFSCR
Trigger: TCGGCAGGAGAAACTCTTGCATGAGAAACTCCGATT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGCAGAAGTCCCAGGTaGTGCCATCCAGTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECRSPR*CHPVAR
Trigger: CCGAGCAACTGGATGGCAGCACCTGGGACTTCTGCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCTCTGCAATCATTTCTaGCATAGCCAGGATGTCGGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGLCNHF*HSQDVG
Trigger: GCCGACATCCTGGCTATGGCAGAAATGATTGCAGAG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTCCAGGAGTCCCTCTaGACTCTGGTTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFQESL*TLVAHK
Trigger: CTTGTGAGCAACCAGAGTGCAGAGGGACTCCTGGAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCATTCTTAGGGAAGTCTaGCTCCAAGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGILREV*LQVLPR
Trigger: CCTGGGCAAGACTTGGAGGCAGACTTCCCTAAGAAT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTTGGCATATTTTGACTaGACCCAGCACTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNLAYFD*TQHFQA
Trigger: TGCTTGGAAGTGCTGGGTGCAGTCAAAATATGCCAA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGAGGTGACTCGGCGATaGAGGACCGTTCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEEVTRR*RTVQVA
Trigger: TGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTGCTCTCCAACATGCTaGGGTCCATGGGGATCACAG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTCSPTC*GPWGSQ
Trigger: CTGTGATCCCCATGGACCGCAGCATGTTGGAGAGCA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGCATGCTCTCCAACATaGTGCGGTCCATGGGGATCA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIACSPT*CGPWGS
Trigger: TGATCCCCATGGACCGCAGCATGTTGGAGAGCATGC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTTTTTCCCTAGGTCATaGCTAGGAACAAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNFFPRS*LGTRGS
Trigger: AGAGCCTCTTGTTCCTAGGCATGACCTAGGGAAAAA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGACCTTTTGGCATGGTaGTGGGGAAGAGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGDLLAW*WGRVEK
Trigger: CTTCTCTACTCTTCCCCAGCACCATGCCAAAAGGTC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAAGGGGACAGGAGTCTaGACAACAGGAGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTKGTGV*TTGVCS
Trigger: GGAGCAGACTCCTGTTGTGCAGACTCCTGTCCCCTT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCCTCCTTCCCTTGTCTaGAGCCACGGGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSPPSLV*SHGAPK
Trigger: TTTGGGGGCCCCGTGGCTGCAGACAAGGGAAGGAGG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCATGCAGCAGGCGCCTaGCAAGATTACCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCHAAGA*QDYPPP
Trigger: TGGGGGAGGGTAATCTTGGCAGGCGCCTGCTGCATG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGGCTGGATATGTACTaGTCCCCTTACCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGWLDMY*SPYLAQ
Trigger: TTGAGCCAGGTAAGGGGAGCAGTACATATCCAGCCA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISQGLL*QGQWVK
Trigger: TTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGGCCCATCCTCGAGTTaGGGCAGTCTGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQGPSSS*GSLGFQ
Trigger: CTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGGCCCATCCTCGAGTTaGGGCAGTCTGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCGPSSS*GSLGFQ
Trigger: CTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGCCCCAGCAACTCAGTaGCTCCATCCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQAPATQ*LHPGLQ
Trigger: CTGGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGAGCCCCTGGATCAGGTaGTACCACCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQSPWIR*YHLRGL
Trigger: CAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCT...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGATTTGCCCCAGCCCCTaGATCAGGTGGTACCACCTC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEICPSP*IRWYHL
Trigger: GAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAAT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCAGTCAGGCCATCTCCTaGCAAGGAAGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALSQAIS*QGRMCR
Trigger: CCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGTCAGGCCATCTCCTaGCAAGGAAGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISQAIS*QGRMCR
Trigger: CCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGTCAGGCCATCTCCTaGCAAGGAAGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSQAIS*QGRMCR
Trigger: CCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGTCAGGCCATCTCCTaGCAAGGAAGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSQAIS*QGRMCR
Trigger: CCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGTGCACAAGTCATCTTaGTGCCCACTGCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEVHKSS*CPLQSA
Trigger: GGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCAC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGCWPGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIQDSRS*CRCKPH
Trigger: GTGGGGCTTACATCTACACCAAGACCGGGAGTCCTG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFCWPS*KRSSGP
Trigger: TGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTWSSS*GCRTGR
Trigger: TCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTTWSSS*GCRTGR
Trigger: TCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTCACGGCAGCAGAACTaGAACACTTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSRQQN*NTWSCQ
Trigger: CTGGCAGGACCAAGTGTTCCAGTTCTGCTGCCGTGA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGGCGCTTACACGCATaGCACCGGGCAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSWRLHA*HRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCGTGTAAGCGCCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGATCTGCCCACGCCAGTaGATGGTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEICPRQ*MVSSSF
Trigger: GAAGCTGCTGGAGACCATCCACTGGCGTGGGCAGAT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTCTGGGTATCCAGGTTaGGTTGGTTCTGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSGYPG*VGSAGY
Trigger: ATAGCCAGCAGAACCAACCCAACCTGGATACCCAGA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCTCTCGGGCCCACTCTaGGTATCCAGGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLSGPL*VSRLGW
Trigger: CCAACCCAACCTGGATACCCAGAGTGGGCCCGAGAG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGAGGGGTGGGAGCAGTaGGAGCTGATCGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCEGWEQ*ELIGSS
Trigger: TGAAGACCCGATCAGCTCCCACTGCTCCCACCCCTC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCTGTTTGACTTCCTTTaGACTTCATCTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNLFDFL*TSSPPC
Trigger: GCAAGGTGGAGATGAAGTCCAAAGGAAGTCAAACAG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGATGGGCACTGGGATaGGCAGCACGATCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERWALG*AARSPV
Trigger: CACAGGTGATCGTGCTGCCCATCCCAGTGCCCATCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCACGAAGATGGGCACTaGGATGGGCAGCACGATCAC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEHEDGH*DGQHDH
Trigger: GTGATCGTGCTGCCCATCCCAGTGCCCATCTTCGTG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGCACTGGCACGAAGATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCALARR*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATCTTCGTGCCAGTGC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCAGATGCATAGGCACTaGCACGAAGATGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTQMHRH*HEDGHW
Trigger: CCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCAGATGCATAGGCACTaGCACGAAGATGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVQMHRH*HEDGHW
Trigger: CCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGTTGGGGAGGAGTGTaGGCTGCCAGGTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECWGGV*AARYSE
Trigger: CTCTGAGTACCTGGCAGCCCACACTCCTCCCCAACA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGCTCACCACCTTGGTaGTGCCCCGAGGGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSCSPPW*CPEGWY
Trigger: GTACCACCCCTCGGGGCACCACCAAGGTGGTGAGCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGGATGCTCACCACCTTaGTGGTGCCCCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDGCSPP*WCPEGW
Trigger: CCACCCCTCGGGGCACCACCAAGGTGGTGAGCATCC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCACATGCTGCGGTCCATaGGGATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGTCCGP*GSQNTR
Trigger: TCTGGTATTCTGTGATCCCCATGGACCGCAGCATGT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGTGAAAGATGGATATaGATGGCACACGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNCERWI*MAHELS
Trigger: ACTGAGCTCGTGTGCCATCCATATCCATCTTTCACA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGTAGCATTGGTTCCTaGGCCTGTCACCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISSIGS*ACHPEG
Trigger: TCCCTCAGGGTGACAGGCCCAGGAACCAATGCTACT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAAGACCAGGGCCCCATaGTTGTCAAGTGGTACGGAA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDKTRAP*LSSGTE
Trigger: TTCCGTACCACTTGACAACCATGGGGCCCTGGTCTT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACTCCACCCAGAGTCTaGACCCAGAAGGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTPPRV*TQKEGF
Trigger: AAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTATGCGGTGGTGAGATaGTGCCAACAACCAATTATT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPYAVVR*CQQPII
Trigger: AATAATTGGTTGTTGGCACCATCTCACCACCGCATA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGAAGATGTAGGCAGTaGCGGCAGGCCCTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRRCRQ*RQALRP
Trigger: TGGGCGCAGGGCCTGCCGCCACTGCCTACATCTTCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAACAGGGAAAGAAGTaGGTACCCCCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGQQGKK*VPPLPE
Trigger: TTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTTGGTGTAGATGTAAGCCCCACAGTCCATGAGTATGGCTaGATATGTACTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EEELRARTPGLGVDVSPTVHEYG*ICTGSR
Trigger: TCTTGAGCCAGTACATATCCAGCCATACTCATGGAC...TGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCATGGCTCTGGCTCAGTaGCAACGCCTGTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVMALAQ*QRLCSN
Trigger: GTTACTGCACAGGCGTTGCCACTGAGCCAGAGCCAT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCGGGTTAAATGGCTCTaGCTCAGTGGCAACGCCTGT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRVKWL*LSGNAC
Trigger: ACAGGCGTTGCCACTGAGCCAGAGCCATTTAACCCG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCCAGGCTCTAGGGTCTaGTCTCCTGCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSPGSRV*SPASHA
Trigger: GGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTCTTGGAGAAAGTGGTaGGGCAGGATGACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSWRKW*GRMTSR
Trigger: TCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCTCAGGCTTGCCACTaGAGAGGCTGTGACAGTAGT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPQACH*RGCDSS
Trigger: ACTACTGTCACAGCCTCTTCAGTGGCAAGCCTGAGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTGCTGGTTGCAGAAATaGCGGATCTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAGATCCGTCATTTCTGCAACCAGCA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGGTGTCTGGGGTTTTaGCTCAGGAGACTGACTGTT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGCLGF*LRRLTV
Trigger: AACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGGGTGTCTGGGGTTTTaGCTCAGGAGACTGACTGTT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTGCLGF*LRRLTV
Trigger: AACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGFSTLV*EGVWGF
Trigger: AAAACCCCAGACACCCTCTCAAACCAAAGTGGAGAA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGACATTGGCCATCTTaGCTGCCATGGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRHWPS*LPWPGH
Trigger: ATGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCACCATTGGGCCGAGTaGTTTCTCTCACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVHHWAE*FLSQTG
Trigger: CCCAGTTTGTGAGAGAAATCACTCGGCCCAATGGTG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCACCATTGGGCCGAGTaGTTTCTCTCACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIHHWAE*FLSQTG
Trigger: CCCAGTTTGTGAGAGAAATCACTCGGCCCAATGGTG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGCCGCACCACATTGGTaGAGGAGAGTTGCATGTGTT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTAAPHW*RRVACV
Trigger: AACACATGCAACTCTCCTTCACCAATGTGGTGCGGC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGAATACCAGAGAGGTaGCTCGGCGATGCAGGACCG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRIPER*LGDAGP
Trigger: CGGTCCTGCATCGCCGAGTCACCTCTCTGGTATTCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGGGATATGCGGTGGTaGGATGGTGCCAACAACCAA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRDMRW*DGANNQ
Trigger: TTGGTTGTTGGCACCATCTCACCACCGCATATCCCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALRFWRF*SPNALA
Trigger: AGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIWCPAM*TSHLGA
Trigger: GGCACCAAGATGACTTGTGCACATTGCCGGACACCA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTWCPAM*TSHLGA
Trigger: GGCACCAAGATGACTTGTGCACATTGCCGGACACCA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVWCPAM*TSHLGA
Trigger: GGCACCAAGATGACTTGTGCACATTGCCGGACACCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCAGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACTGC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGAGACAGACGGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDRDRRM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGAAGCAAGAATCGCTaGAGAGCCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERSKNR*RAGVPR
Trigger: GCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCCCCCTCAGGGCTTGTaGGCTGGAACTTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDPPQGL*AGTWSS
Trigger: GCTGGACCAAGTTCCAGCGCACAAGCCCTGAGGGGG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGCAAGAGTTTCTCCTaGCGACAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVCKSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGTCGGCAGGAGAAACTCTTGCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTGCAGAAGTCCCAGGTaGTGCCATCCAGTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCCRSPR*CHPVAR
Trigger: CCGAGCAACTGGATGGCAGCACCTGGGACTTCTGCA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTCTTACAGTCCTCACTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSYSPH*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGTGAGGACTGTAAGA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACTTCATCTCCACCTTaGAGGAGACGCCCCGATTCT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTSSPP*RRRPDS
Trigger: AGAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTCTGGCAGTACAGATaGATAGGCACTGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFWQYR*IGTGTK
Trigger: CTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTCTGCCTCCAAGTCTTaGCCAGGCTCATCCAAGACA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSASKS*PGSSKT
Trigger: TGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGTACACTTGCGGGACTaGCGCACCACATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEVHLRD*RTTLVK
Trigger: CTTCACCAATGTGGTGCGGCAGTCCCGCAAGTGTAC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATATGCGGTTCTCACGCTaGTCTAAGATAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDMRFSR*SKIGAS
Trigger: TGAAGCCCCTATCTTAGAGCAGCGTGAGAACCGCAT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGGTAGAACACATCGTTaGGAGTCCGGAGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTGRTHR*ESGGFQ
Trigger: CTGAAAGCCTCCGGACTCGCAACGATGTGTTCTACC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGCATGCTCTCCAACATaGTGCGGTCCATGGGGATCA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEACSPT*CGPWGS
Trigger: TGATCCCCATGGACCGCAGCATGTTGGAGAGCATGC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCAAGGATTGGTGCTTaGCGAGGGGGTGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPRIGA*RGGEGY
Trigger: ATATCCCTCACCCCCTCGGCAAGCACCAATCCTTGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGTCCATGAGTATGGCTaGATATGTACTGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTVHEYG*ICTAAG
Trigger: CCCTGCCGCAGTACATATCCAGCCATACTCATGGAC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314425.9
ENST00000373984.7
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCGAGTTGGGGCAGTCTaGGATTCCAGTAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRVGAV*DSSRSS
Trigger: AGAGGATCTACTGGAATCCCAGACTGCCCCAACTCG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGATTTGCCCCAGCCCCTaGATCAGGTGGTACCACCTC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQICPSP*IRWYHL
Trigger: GAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAAT...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTATTTGCCCCAGCCCCTaGATCAGGTGGTACCACCTC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCICPSP*IRWYHL
Trigger: GAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAAT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGGCATTTGGGCTCTGTaGCTGCCCTTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSGIWAL*LPLGKL
Trigger: GAGCTTCCCCAAGGGCAGCCACAGAGCCCAAATGCC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGTGCACAAGTCATCTTaGTGCCCACTGCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQVHKSS*CPLQSA
Trigger: GGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCAC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDDVQNS*KEPPEP
Trigger: TGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYAGSPD*GIGRCC
Trigger: GCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYAGSPD*GIGRCC
Trigger: GCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGFSVPC*PGIWRS
Trigger: GCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SAPPSCTPPSRLCCRTAFTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEQDSRS*CRCKPH
Trigger: GTGGGGCTTACATCTACACCAAGACCGGGAGTCCTG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEQNRFC*PSWKRS
Trigger: GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGGGAACAGAACAAGCTaGTCTTGCCATTACGATCCA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGGNRTS*SCHYDP
Trigger: TGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPETWSSS*GCRTGR
Trigger: TCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTCAGGGCTTGTGCGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSGLVR*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCGCACAAGCCCTGA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCAGAACTGGAACACTTaGTCCTGCCAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIQNWNT*SCQSKT
Trigger: GGTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTCTGGGTATCCAGGTTaGGTTGGTTCTGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSGYPG*VGSAGY
Trigger: ATAGCCAGCAGAACCAACCCAACCTGGATACCCAGA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGAACACCGTATTGTTaGGGAGGAGTGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERTPYC*GGVWAA
Trigger: GGCAGCCCACACTCCTCCCCAACAATACGGTGTTCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGCTCACCACCTTGGTaGTGCCCCGAGGGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDCSPPW*CPEGWY
Trigger: GTACCACCCCTCGGGGCACCACCAAGGTGGTGAGCA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAAAGATGGATATGGATaGCACACGAGCTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGKDGYG*HTSSVQ
Trigger: CTGGACTGAGCTCGTGTGCCATCCATATCCATCTTT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGAAAACGGGCAAGCTaGCTTTTGCCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRKRAS*LLPITG
Trigger: CCCAGTGATGGGCAAAAGCCAGCTTGCCCGTTTTCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISTYAG*VRKPKA
Trigger: GGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTACACAAGGGTGGGCATaGCTCACTGAAGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCTQGWA*LTEGTG
Trigger: GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAATCTCCTGCTCTCAGTaGAATCTACAACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VRPQAGCVAEPLLLALVEISCSQ*NLQPQV
Trigger: AACCTGAGGTTGTAGATTCCACTGAGAGCAGGAGAT...TTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAATCACTGGGGTCCATaGGTATGGCTGGATATGTAC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDNHWGP*VWLDMY
Trigger: GTACATATCCAGCCATACTCATGGACCCCAGTGATT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSGEAG*RAEELR
Trigger: CCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCCTCAGGCTTGCCACTaGAGAGGCTGTGACAGTAGT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCPQACH*RGCDSS
Trigger: ACTACTGTCACAGCCTCTTCAGTGGCAAGCCTGAGG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTTTCTCCACTCCGCTaGATCGGAGTTTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFSPLR*IGVSHA
Trigger: TGCATGAGAAACTCCGATTCAGCGGAGTGGAGAAAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGCAGTAAGTACAAGTaGTACAGCACAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSSKYK*YSTSPA
Trigger: AGCTGGGCTTGTGCTGTATCACTTGTACTTACTGCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGACATTGGCCATCTTaGCTGCCATGGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERHWPS*LPWPGH
Trigger: ATGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGCACCAGCCGCTTTTaGCCCTTCCTCATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSTSRF*PFLMVR
Trigger: CCGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCCGGTACAACTAGGCTaGCTGCTCATGGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDPVQLG*LLMESR
Trigger: CCGGGACTCCATGAGCAGTCAGCCTAGTTGTACCGG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGTGGGCATGGCTCACTaGAGGGACAGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYVGMAH*RDRPGA
Trigger: GGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCAC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGAGGGGAGCCCCTTCTTaGAGTAGCTATGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQRGAPS*SSYGGG
Trigger: ACCACCTCCATAGCTACTGCAAGAAGGGGCTCCCCT...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERFWRF*SPNALA
Trigger: AGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDHKSSW*PLQSAR
Trigger: CCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGGTACAGGTCTTTTTaGCCGAGGGCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRYRSF*PRASWR
Trigger: TCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGGTACAGGTCTTTTTaGCCGAGGGCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRYRSF*PRASWR
Trigger: TCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGAGACAGACGGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRDRRM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCAGAGACAGACGGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALRDRRM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCATTGCTGACCTCGTaGAGGACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTCCTGCACGAGGTCAGCAATGG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCCAAGCAGGTTGTGTTaGAGAACCGCTTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALPSRLC*RTAFVG
Trigger: GCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCCAAGCAGGTTGTGTTaGAGAACCGCTTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVPSRLC*RTAFVG
Trigger: GCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGAACTGGTAGACTGTaGGGTCAACCTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRTGRL*GQPCCS
Trigger: ACTACAACAAGGTTGACCGCACAGTCTACCAGTTCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGACAGCTCAGGTGAATaGCCCCCTCAGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDDSSGE*PPQGLC
Trigger: GCACAAGCCCTGAGGGGGGCATTCACCTGAGCTGTC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTTCTCCTGCCGACAGTaGTCACACTGGGACACCACA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCFSCRQ*SHWDTT
Trigger: TGTGGTGTCCCAGTGTGAGCACTGTCGGCAGGAGAA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGCAAGAGTTTCTCCTaGCGACAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECKSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGTCGGCAGGAGAAACTCTTGCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAATCGGAGTTTCTCATaGAAGAGTTTCTCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGNRSFS*KSFSCR
Trigger: TCGGCAGGAGAAACTCTTGCATGAGAAACTCCGATT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTACCACAGCAGGTACTTaGTCTTACAGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTTTAGT*SYSPHC
Trigger: GCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGAAGACACTGCTGGTTaGAGAAATGACGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIEDTAG*RNDGSA
Trigger: GGCAGATCCGTCATTTCTGCAACCAGCAGTGTCTTC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTCTGGCAGTACAGATaGATAGGCACTGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFWQYR*IGTGTK
Trigger: CTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCTCTGCAATCATTTCTaGCATAGCCAGGATGTCGGC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTLCNHF*HSQDVG
Trigger: GCCGACATCCTGGCTATGGCAGAAATGATTGCAGAG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGCAGCTCATCACCCTTaGTGGTTTCTCCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIAAHHP*WFLHWH
Trigger: ATGCCAATGGAGAAACCAGCAAGGGTGATGAGCTGC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGCGGAGGGGATTCATaGGGTTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSGGDS*GSHAAL
Trigger: TAGAGCAGCGTGAGAACCGCATGAATCCCCTCCGCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGGTAGAACACATCGTTaGGAGTCCGGAGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEGRTHR*ESGGFQ
Trigger: CTGAAAGCCTCCGGACTCGCAACGATGTGTTCTACC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGCATGCTCTCCAACATaGTGCGGTCCATGGGGATCA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCACSPT*CGPWGS
Trigger: TGATCCCCATGGACCGCAGCATGTTGGAGAGCATGC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTCAGAAGGTAGTTTTTaGCTTGGGAGGTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGSEGSF*LGRSVH
Trigger: ATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCCACAGATCCCATCCTaGATGACTCAAGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIPQIPS*MTQGPI
Trigger: TATGGGACCTTGAGTCATGCAGGATGGGATCTGTGG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTCTGGGACCTCCAATaGAAGATGGGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFWDLQ*KMGKRE
Trigger: TTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCCCCCGTCACACCCTaGTCGCCCTACCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYAPVTP*SPYLLE
Trigger: CTCCAGGAGGTAGGGCGAGCAGGGTGTGACGGGGGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCTCCCTGAGTCTTCCTaGAGGAGCTCCCTGTATTAT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLPESS*RSSLYY
Trigger: ATAATACAGGGAGCTCCTGCAGGAAGACTCAGGGAG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGTCCATGAGTATGGCTaGATATGTACTGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEVHEYG*ICTAAG
Trigger: CCCTGCCGCAGTACATATCCAGCCATACTCATGGAC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314425.9
ENST00000373984.7
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCGAGTTGGGGCAGTCTaGGATTCCAGTAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERVGAV*DSSRSS
Trigger: AGAGGATCTACTGGAATCCCAGACTGCCCCAACTCG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGCCCCAGCAACTCAGTaGCTCCATCCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDAPATQ*LHPGLQ
Trigger: CTGGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: HLLVRPQAGCVAEPLLLALLFNM*GLQCYW
Trigger: CCAATAACACTGCAGTCCCCACATATTGAAGAGGAG...GGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGGCATTTGGGCTCTGTaGCTGCCCTTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDGIWAL*LPLGKL
Trigger: GAGCTTCCCCAAGGGCAGCCACAGAGCCCAAATGCC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCTGGAATGCTCTCAGTaGAATCTACAACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGLECSQ*NLQPQV
Trigger: AACCTGAGGTTGTAGATTCCACTGAGAGCATTCCAG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCCACAACCGAGTCCTTaGTGTTCCAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIPQPSP*CSRSPS
Trigger: AGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALDVQNS*KEPPEP
Trigger: TGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATC...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPAGSPD*GIGRCC
Trigger: GCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTITSPVF*HMLQRV
Trigger: TACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTSPVF*HMLQRV
Trigger: TACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALCWPGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQQDSRS*CRCKPH
Trigger: GTGGGGCTTACATCTACACCAAGACCGGGAGTCCTG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACACAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTQDSRS*CRCKPH
Trigger: GTGGGGCTTACATCTACACCAAGACCGGGAGTCCTG...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTFCWPS*KRSSGP
Trigger: TGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACACAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTQNRFC*PSWKRS
Trigger: GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTG...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCQNRFC*PSWKRS
Trigger: GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTCTGGGTATCCAGGTTaGGTTGGTTCTGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSGYPG*VGSAGY
Trigger: ATAGCCAGCAGAACCAACCCAACCTGGATACCCAGA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGCTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVCCSPL*FERVSG
Trigger: CCCAGACACCCTCTCAAACCAAAGTGGAGAACAGCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGAGGGGTGGGAGCAGTaGGAGCTGATCGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDEGWEQ*ELIGSS
Trigger: TGAAGACCCGATCAGCTCCCACTGCTCCCACCCCTC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTCAGTGGCTTACACATaGCAGCCTTGTTTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISVAYT*QPCFCG
Trigger: CCCGCAAAAACAAGGCTGCCATGTGTAAGCCACTGA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTCAGTGGCTTACACATaGCAGCCTTGTTTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSVAYT*QPCFCG
Trigger: CCCGCAAAAACAAGGCTGCCATGTGTAAGCCACTGA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCCGATTCTGCATCAGTaGCTTACACATGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIPILHQ*LTHGSL
Trigger: AAGGCTGCCATGTGTAAGCCACTGATGCAGAATCGG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGATGGGCACTGGGATaGGCAGCACGATCACCTGTG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRWALG*AARSPV
Trigger: CACAGGTGATCGTGCTGCCCATCCCAGTGCCCATCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGCACTGGCACGAAGATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDALARR*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATCTTCGTGCCAGTGC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSPSAL*LLTRSQ
Trigger: TTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGTTGGGGAGGAGTGTaGGCTGCCAGGTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSCWGGV*AARYSE
Trigger: CTCTGAGTACCTGGCAGCCCACACTCCTCCCCAACA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACATGCTGCGGTCCATaGGGATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTCCGP*GSQNTR
Trigger: TCTGGTATTCTGTGATCCCCATGGACCGCAGCATGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTACATGCTGCGGTCCATaGGGATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTITCCGP*GSQNTR
Trigger: TCTGGTATTCTGTGATCCCCATGGACCGCAGCATGT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAAAGATGGATATGGATaGCACACGAGCTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDKDGYG*HTSSVQ
Trigger: CTGGACTGAGCTCGTGTGCCATCCATATCCATCTTT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTCAGATAAGACCTTTTaGCATGGTGCTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSDKTF*HGAGEE
Trigger: CTCTTCCCCAGCACCATGCCAAAAGGTCTTATCTGA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGTGTTTTATGTAAATaGTCCCCTCATCGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPCVLCK*SPHRFH
Trigger: ATGAAAGCGATGAGGGGACCATTTACATAAAACACA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTACACAAGGGTGGGCATaGCTCACTGAAGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSTQGWA*LTEGTG
Trigger: GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGTGGCTGGATATGTACTaGCTCAAGAGTCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQWLDMY*LKSLAP
Trigger: GGGGGCCAGACTCTTGAGCCAGTACATATCCAGCCA...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373978.1
ENST00000373981.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGGTCTGAGAACTGTTaGTTCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEWSENC*FHPPES
Trigger: AGACTCTGGGGGATGGAATCAACAGTTCTCAGACCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSGEAG*RAEELR
Trigger: CCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATCTTGGAGAAAGTGGTaGGGCAGGATGACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTSWRKW*GRMTSR
Trigger: TCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTTTCTCCACTCCGCTaGATCGGAGTTTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIFSPLR*IGVSHA
Trigger: TGCATGAGAAACTCCGATTCAGCGGAGTGGAGAAAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGCAGTAAGTACAAGTaGTACAGCACAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSSKYK*YSTSPA
Trigger: AGCTGGGCTTGTGCTGTATCACTTGTACTTACTGCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGCTGGTTGCAGAAATaGCGGATCTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAGATCCGTCATTTCTGCAACCAGCA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIFSTLV*EGVWGF
Trigger: AAAACCCCAGACACCCTCTCAAACCAAAGTGGAGAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFSTLV*EGVWGF
Trigger: AAAACCCCAGACACCCTCTCAAACCAAAGTGGAGAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTTCCACTCTTCTGTTTaGCTTCCTTTGGACTTCATC +
Preference number: 4 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGFHSSV*LPLDFI
Trigger: GATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGCATTGACACCATATaGATAGTTGAGCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSIDTI*IVEPGT
Trigger: TGTACCGGGCTCAACTATTCATATGGTGTCAATGCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTCCATTGGCATATTTTaGCTGCACCCAGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSIGIF*LHPALP
Trigger: TGGAAGTGCTGGGTGCAGTCAAAATATGCCAATGGA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGTAGTAAAGGTCCGTaGAAATGTTCACCATCCGGT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGSKGP*KCSPSG
Trigger: ACCGGATGGTGAACATTTTCACGGACCTTTACTACC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCTGGGCCTGTCACCCTaGGGGACATGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLGLSP*GTWPQD
Trigger: GTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCAG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCAGGGCCCTTCAGAATaGGTAGCATTGGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSQGPSE*VALVPG
Trigger: CCCAGGAACCAATGCTACTCATTCTGAAGGGCCCTG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAAGGCAGGGAATGGGTaGGCGGAAAGGAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDKAGNG*AERSSQ
Trigger: CTGACTGCTCCTTTCCGCTCACCCATTCCCTGCCTT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGGAGGGGTTTACTCTaGAGCATAAAGAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRRGLL*SIKKTG
Trigger: GCCCGTTTTCTTTATGCTTCAGAGTAAACCCCTCCT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGGGATATGCGGTGGTaGGATGGTGCCAACAACCAA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRDMRW*DGANNQ
Trigger: TTGGTTGTTGGCACCATCTCACCACCGCATATCCCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGGGAGGTCTGTCCATTaGACTAAAGGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEGRSVH*TKGRQL
Trigger: TAACTGCCTCCCTTTAGTTCAATGGACAGACCTCCC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCCTCGCCTGTCCTTTaGCCACAGATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSSPVL*PQIPSC
Trigger: GCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCTGGGATCTTCTCCCTaGGTCTTCCTGCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDLGSSP*VFLQEL
Trigger: GAGCTCCTGCAGGAAGACTCAGGGAGAAGATCCCAG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGGGGAGCCCCTTCTTaGAGTAGCTATGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRGAPS*SSYGGG
Trigger: ACCACCTCCATAGCTACTGCAAGAAGGGGCTCCCCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYLSVGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAA...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTWCPAM*TSHLGA
Trigger: GGCACCAAGATGACTTGTGCACATTGCCGGACACCA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQGIGRC*WASYRE
Trigger: CTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATGGGGGATCGGGCGCTaGTGCTGGGCCTCATACAGG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQWGIGR*CWASYR
Trigger: CCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGAACAAGCTGGTCTTaGCATTACGATCCACATGTG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDRTSWS*HYDPHV
Trigger: CACATGTGGATCGTAATGGCAAGACCAGCTTGTTCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGGGCCAGTGAGCCCTaGCTGCTTCACTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRASEP*LLHFVR
Trigger: TCTTACAAAGTGAAGCAGGCAGGGCTCACTGGCCCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGAACTGGTAGACTGTaGGGTCAACCTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDRTGRL*GQPCCS
Trigger: ACTACAACAAGGTTGACCGCACAGTCTACCAGTTCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGCACACAGCCTTCGCTaGAGAAGCTTTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCAHSLR*RSFSPL
Trigger: GAGTGGAGAAAAGCTTCTGCAGCGAAGGCTGTGTGC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGAAGACACTGCTGGTTaGAGAAATGACGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEEDTAG*RNDGSA
Trigger: GGCAGATCCGTCATTTCTGCAACCAGCAGTGTCTTC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGGTCCTCACTGTGTTaGTGTTCTCCACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGSSLC*CSPLWF
Trigger: AAACCAAAGTGGAGAACAGCAACACAGTGAGGACCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTGGCATATTTTGACTaGACCCAGCACTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLAYFD*TQHFQA
Trigger: TGCTTGGAAGTGCTGGGTGCAGTCAAAATATGCCAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTGGTGAAGGAGAGTTaGATGTGTTCCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTILVKES*MCSSAV
Trigger: GACAGCTGAGGAACACATGCAACTCTCCTTCACCAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDGHSSG*SPPWWC
Trigger: GCACCACCAAGGTGGTGAGCATCCGCTACTATGCCC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGCGGAGGGGATTCATaGGGTTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSGGDS*GSHAAL
Trigger: TAGAGCAGCGTGAGAACCGCATGAATCCCCTCCGCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGCTCTCCAACATGCTaGGGTCCATGGGGATCACAG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSCSPTC*GPWGSQ
Trigger: CTGTGATCCCCATGGACCGCAGCATGTTGGAGAGCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTCAGAAGGTAGTTTTTaGCTTGGGAGGTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSEGSF*LGRSVH
Trigger: ATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTCTGGGACCTCCAATaGAAGATGGGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFWDLQ*KMGKRE
Trigger: TTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGTGGGTACCCCCTTTaGCAGAAGCTAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSGYPL*QKLIVF
Trigger: GAAAACAATTAGCTTCTGGCAAAGGGGGTACCCACT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCCCCAAACCAGGTCCTaGAAAGCTACCCCCTACTCT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSPQTRS*KATPYS
Trigger: AGAGTAGGGGGTAGCTTTGCAGGACCTGGTTTGGGG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGGCTGGATATGTACTaGTCCCCTTACCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEWLDMY*SPYLAQ
Trigger: TTGAGCCAGGTAAGGGGAGCAGTACATATCCAGCCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGTCCATGAGTATGGCTaGATATGTACTGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQVHEYG*ICTAAG
Trigger: CCCTGCCGCAGTACATATCCAGCCATACTCATGGAC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACACGAGTTGGGGCAGTCTaGGATTCCAGTAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTRVGAV*DSSRSS
Trigger: AGAGGATCTACTGGAATCCCAGACTGCCCCAACTCG...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGACTGCAGTGTTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGLQCY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGGACTGCAGTGTTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIGLQCY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLLFNM*GLQCYW
Trigger: CCAATAACACTGCAGTCCCCACATATTGAAGAGGAG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGTGCACAAGTCATCTTaGTGCCCACTGCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDVHKSS*CPLQSA
Trigger: GGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCAC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPETSPVF*HMLQRV
Trigger: TACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECWPGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFSVPC*PGIWRS
Trigger: GCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCGATTCTGCATCAGTaGCTTACACATGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPILHQ*LTHGSL
Trigger: AAGGCTGCCATGTGTAAGCCACTGATGCAGAATCGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGGCACCGGGACTTTCTaGCAGTACAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSGTGTF*QYRCIG
Trigger: GCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTTGACCCTTCCTCATaGTTCGGGGAAGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIFDPSS*FGEGLV
Trigger: AACAAGACCTTCCCCGAACCATGAGGAAGGGTCAAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGGATGCTCACCACCTTaGTGGTGCCCCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQGCSPP*WCPEGW
Trigger: CCACCCCTCGGGGCACCACCAAGGTGGTGAGCATCC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTGTGTTTTATGTAAATaGTCCCCTCATCGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNCVLCK*SPHRFH
Trigger: ATGAAAGCGATGAGGGGACCATTTACATAAAACACA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCAACAGGGAAAGAAGTaGGTACCCCCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEQQGKK*VPPLPE
Trigger: TTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTACTACAACACAAGGGTaGGCATGGCTCACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCTTTQG*AWLTEG
Trigger: CCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCATCCAGTTGCTCGGTaGCTCCGCGCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYHPVAR*LRAGRS
Trigger: AGACCTGCCAGCGCGGAGTCACCGAGCAACTGGATG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGCATTGACACCATATaGATAGTTGAGCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSIDTI*IVEPGT
Trigger: TGTACCGGGCTCAACTATTCATATGGTGTCAATGCT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCACCATTGGGCCGAGTaGTTTCTCTCACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSHHWAE*FLSQTG
Trigger: CCCAGTTTGTGAGAGAAATCACTCGGCCCAATGGTG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCAGCCAGGATGCGATTaGGCATGCTCTCCAACATGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDQPGCD*ACSPTC
Trigger: GCATGTTGGAGAGCATGCTCAATCGCATCCTGGCTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGGAGGGGTTTACTCTaGAGCATAAAGAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERRGLL*SIKKTG
Trigger: GCCCGTTTTCTTTATGCTTCAGAGTAAACCCCTCCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATGCTTGCCGAGGGGGTaGGGGATATGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQCLPRG*GICGGE
Trigger: CTCACCACCGCATATCCCTCACCCCCTCGGCAAGCA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAATTTCTCCCAGCCCTTaGCCCATCAGCCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTISPSP*PISHLY
Trigger: ATAAAGGTGGCTGATGGGTCAAGGGCTGGGAGAAAT...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: HLLVRPQAGCVAEPLLLASICGD*SVIGES
Trigger: AGATTCTCCAATAACACTGCAGTCCCCACATATTGA...GGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRFWRF*SPNALA
Trigger: AGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNLSVGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCATCTTGGTGCCCACTaGAGAGCGCCCGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYHLGAH*RAPGPL
Trigger: CAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAAGGTACAGGTCTTTTTaGCCGAGGGCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTRYRSF*PRASWR
Trigger: TCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCT...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGAGACAGACGGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRDRRM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAG +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNGIGRC*WASYRE
Trigger: CTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCC...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGAACAAGCTGGTCTTaGCATTACGATCCACATGTG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRTSWS*HYDPHV
Trigger: CACATGTGGATCGTAATGGCAAGACCAGCTTGTTCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGAACTGGTAGACTGTaGGGTCAACCTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRTGRL*GQPCCS
Trigger: ACTACAACAAGGTTGACCGCACAGTCTACCAGTTCT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGCAAGAGTTTCTCCTaGCGACAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSCKSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGTCGGCAGGAGAAACTCTTGCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGCACACAGCCTTCGCTaGAGAAGCTTTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSAHSLR*RSFSPL
Trigger: GAGTGGAGAAAAGCTTCTGCAGCGAAGGCTGTGTGC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTACTTCATCTCCACCTTaGAGGAGACGCCCCGATTCT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSTSSPP*RRRPDS
Trigger: AGAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTTCCAGGAGTCCCTCTaGACTCTGGTTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSFQESL*TLVAHK
Trigger: CTTGTGAGCAACCAGAGTGCAGAGGGACTCCTGGAA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTGGCATATTTTGACTaGACCCAGCACTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLAYFD*TQHFQA
Trigger: TGCTTGGAAGTGCTGGGTGCAGTCAAAATATGCCAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTATGCGGTTCTCACGCTaGTCTAAGATAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCMRFSR*SKIGAS
Trigger: TGAAGCCCCTATCTTAGAGCAGCGTGAGAACCGCAT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGCGGAGGGGATTCATaGGGTTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSGGDS*GSHAAL
Trigger: TAGAGCAGCGTGAGAACCGCATGAATCCCCTCCGCT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAAGAGGCTCTACCTATaGGGGATGGGTCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSKRLYL*GMGQET
Trigger: GGTTTCCTGACCCATCCCGCATAGGTAGAGCCTCTT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTTTTCCCTAGGTCATaGCTAGGAACAAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFFPRS*LGTRGS
Trigger: AGAGCCTCTTGTTCCTAGGCATGACCTAGGGAAAAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTTTTTCCCTAGGTCATaGCTAGGAACAAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTFFPRS*LGTRGS
Trigger: AGAGCCTCTTGTTCCTAGGCATGACCTAGGGAAAAA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGCACAACAGGAGTCTaGTCCCCGTACTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECTTGV*SPYLVI
Trigger: AATGACTAAGTACGGGGAGCAGACTCCTGTTGTGCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGTGGGTACCCCCTTTaGCAGAAGCTAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSGYPL*QKLIVF
Trigger: GAAAACAATTAGCTTCTGGCAAAGGGGGTACCCACT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGTGGGTACCCCCTTTaGCAGAAGCTAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSGYPL*QKLIVF
Trigger: GAAAACAATTAGCTTCTGGCAAAGGGGGTACCCACT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGCAGTAACCGTTACTaGTTGATGACCCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECSNRY*LMTPKP
Trigger: TGGTTTGGGGGTCATCAAGCAGTAACGGTTACTGCA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCGAGTTGGGGCAGTCTaGGATTCCAGTAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRVGAV*DSSRSS
Trigger: AGAGGATCTACTGGAATCCCAGACTGCCCCAACTCG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCTAGGCGGGGCATTTaGGCTCTGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYARRGI*ALWLPL
Trigger: CAAGGGCAGCCACAGAGCCCAAATGCCCCGCCTAGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGCTAGGCGGGGCATTTaGGCTCTGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQARRGI*ALWLPL
Trigger: CAAGGGCAGCCACAGAGCCCAAATGCCCCGCCTAGC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCTGGAATGCTCTCAGTaGAATCTACAACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTILECSQ*NLQPQV
Trigger: AACCTGAGGTTGTAGATTCCACTGAGAGCATTCCAG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCTGGAATGCTCTCAGTaGAATCTACAACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTLECSQ*NLQPQV
Trigger: AACCTGAGGTTGTAGATTCCACTGAGAGCATTCCAG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCTGGAATGCTCTCAGTaGAATCTACAACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLECSQ*NLQPQV
Trigger: AACCTGAGGTTGTAGATTCCACTGAGAGCATTCCAG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCCACAACCGAGTCCTTaGTGTTCCAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCPQPSP*CSRSPS
Trigger: AGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTDVQNS*KEPPEP
Trigger: TGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTTSPVF*HMLQRV
Trigger: TACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCCWPGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEFSVPC*PGIWRS
Trigger: GCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDFCWPS*KRSSGP
Trigger: TGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCTTGCACCAGACACATaGGTACACACGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLAPDT*VHTCVF
Trigger: AAAAACACACGTGTGTACCCATGTGTCTGGTGCAAG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCAGAACTGGAACACTTaGTCCTGCCAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSQNWNT*SCQSKT
Trigger: GGTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCTGTTTGACTTCCTTTaGACTTCATCTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTILFDFL*TSSPPC
Trigger: GCAAGGTGGAGATGAAGTCCAAAGGAAGTCAAACAG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCAGCACGATCACCTGTaGCTTCCACTCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCQHDHL*LPLFCL
Trigger: CAAACAGAAGAGTGGAAGCCACAGGTGATCGTGCTG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTTTCCTCTGGCGGACTaGGGCATAGTAGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDFPLAD*GIVADA
Trigger: AGCATCCGCTACTATGCCCCAGTCCGCCAGAGGAAA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGTAGCATTGGTTCCTaGGCCTGTCACCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSSIGS*ACHPEG
Trigger: TCCCTCAGGGTGACAGGCCCAGGAACCAATGCTACT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAAGACCAGGGCCCCATaGTTGTCAAGTGGTACGGAA +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSKTRAP*LSSGTE
Trigger: TTCCGTACCACTTGACAACCATGGGGCCCTGGTCTT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTATGCGGTGGTGAGATaGTGCCAACAACCAATTATT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDYAVVR*CQQPII
Trigger: AATAATTGGTTGTTGGCACCATCTCACCACCGCATA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCTGGCTCAAGAGTCTaGCCCCCGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPGSRV*PPSHPA
Trigger: AGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGAATCACTGGGGTCCATaGGTATGGCTGGATATGTAC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQNHWGP*VWLDMY
Trigger: GTACATATCCAGCCATACTCATGGACCCCAGTGATT...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCAGGCTCTAGGGTCTaGTCTCCTGCATCCCATGCC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPGSRV*SPASHA
Trigger: GGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCAGAGTCTCTCCCACTaGAGGGCTAGGCGGGGCATT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYQSLSH*RARRGI
Trigger: AATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATCCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNPRCHC*PRAGPL
Trigger: GAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGG...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTCCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPPRCHC*PRAGPL
Trigger: GAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGG...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTCCACTCTTCTGTTTaGCTTCCTTTGGACTTCATC +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFHSSV*LPLDFI
Trigger: GATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCCGGTACAACTAGGCTaGCTGCTCATGGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYPVQLG*LLMESR
Trigger: CCGGGACTCCATGAGCAGTCAGCCTAGTTGTACCGG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGGTAGTAAAGGTCCGTaGAAATGTTCACCATCCGGT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCGSKGP*KCSPSG
Trigger: ACCGGATGGTGAACATTTTCACGGACCTTTACTACC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGCCGCACCACATTGGTaGAGGAGAGTTGCATGTGTT +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDAAPHW*RRVACV
Trigger: AACACATGCAACTCTCCTTCACCAATGTGGTGCGGC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCGAGAATATCCTCTTTaGTACGCATGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCREYPL*YAWVWP
Trigger: AGGCCAAACCCATGCGTATCAAAGAGGATATTCTCG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDRFWRF*SPNALA
Trigger: AGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCATCTGACACTGGAATaGTCTCAGTGGAATCTACAA +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIHLTLE*SQWNLQ
Trigger: TTGTAGATTCCACTGAGAGCATTCCAGTGTCAGATG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATCATCTTGGTGCCCACTaGAGAGCGCCCGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNHLGAH*RAPGPL
Trigger: CAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATG...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISRSPS*RRYRSF
Trigger: AAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCCAAGCAGGTTGTGTTaGAGAACCGCTTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSPSRLC*RTAFVG
Trigger: GCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCTTACAGTCCTCACTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSYSPH*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGTGAGGACTGTAAGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTACCACAGCAGGTACTTaGTCTTACAGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSTTAGT*SYSPHC
Trigger: GCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGGCACCGGGCAGCCTTaGAGTACCACAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYGTGQP*STTAGT
Trigger: AGTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGAGACGCCCCGATTCTaGATCAGTGGCTTACACATG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDETPRF*ISGLHM
Trigger: CATGTGTAAGCCACTGATGCAGAATCGGGGCGTCTC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCTGCCTCCAAGTCTTaGCCAGGCTCATCCAAGACA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSASKS*PGSSKT
Trigger: TGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGCAGCTCATCACCCTTaGTGGTTTCTCCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSAAHHP*WFLHWH
Trigger: ATGCCAATGGAGAAACCAGCAAGGGTGATGAGCTGC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTATGCGGTTCTCACGCTaGTCTAAGATAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSMRFSR*SKIGAS
Trigger: TGAAGCCCCTATCTTAGAGCAGCGTGAGAACCGCAT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGACCTTTTGGCATGGTaGTGGGGAAGAGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSDLLAW*WGRVEK
Trigger: CTTCTCTACTCTTCCCCAGCACCATGCCAAAAGGTC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTCAGAAGGTAGTTTTTaGCTTGGGAGGTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESEGSF*LGRSVH
Trigger: ATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCAGTGGCAACGCCTGTaGAGTAACCGTTACTGCTTG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDQWQRL*SNRYCL
Trigger: CAAGCAGTAACGGTTACTGCACAGGCGTTGCCACTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATCCCTACCTACGCCATaGAGCAGGCGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSLPTP*SRRLPR
Trigger: TCTTGGCAGGCGCCTGCTGCATGGCGTAGGTAGGGA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACGGCCCATCCTCGAGTTaGGGCAGTCTGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYGPSSS*GSLGFQ
Trigger: CTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCC...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGACTGCAGTGTTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTGLQCY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGGACTGCAGTGTTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQGLQCY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGGACTGCAGTGTTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCGLQCY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACGGCATTTGGGCTCTGTaGCTGCCCTTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYGIWAL*LPLGKL
Trigger: GAGCTTCCCCAAGGGCAGCCACAGAGCCCAAATGCC...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGGCATTTGGGCTCTGTaGCTGCCCTTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQGIWAL*LPLGKL
Trigger: GAGCTTCCCCAAGGGCAGCCACAGAGCCCAAATGCC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQIGRCC*ASYRER
Trigger: TCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGAT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGTTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQFSVPC*PGIWRS
Trigger: GCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAA...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTFSVPC*PGIWRS
Trigger: GCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPETGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTGTGCGCTGGAACTTaGTCCAGCAGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLCAGT*SSSWGC
Trigger: GCAGCCCCAGCTGCTGGACCAAGTTCCAGCGCACAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCAGAACTGGAACACTTaGTCCTGCCAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDQNWNT*SCQSKT
Trigger: GGTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACTCTCGGGCCCACTCTaGGTATCCAGGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLSGPL*VSRLGW
Trigger: CCAACCCAACCTGGATACCCAGAGTGGGCCCGAGAG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTATTCCCATTTTCCTCTaGGGTCCTCACTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCIPIFL*GPHCVA
Trigger: AGCAACACAGTGAGGACCCCAGAGGAAAATGGGAAT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCAGCACGATCACCTGTaGCTTCCACTCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSQHDHL*LPLFCL
Trigger: CAAACAGAAGAGTGGAAGCCACAGGTGATCGTGCTG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCTTCAGCTCCTCAATaGTCTCTACAATCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPSAPQ*SLQSCL
Trigger: CAGACAAGATTGTAGAGACCATTGAGGAGCTGAAGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTTTGACCCTTCCTCATaGTTCGGGGAAGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCFDPSS*FGEGLV
Trigger: AACAAGACCTTCCCCGAACCATGAGGAAGGGTCAAA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAAGACCAGGGCCCCATaGTTGTCAAGTGGTACGGAA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDKTRAP*LSSGTE
Trigger: TTCCGTACCACTTGACAACCATGGGGCCCTGGTCTT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCTTTTGGCATGGTGCTaGGGAAGAGTAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSLLAWC*GRVEKG
Trigger: TCCCTTCTCTACTCTTCCCCAGCACCATGCCAAAAG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACTGCTCCCCTTACCTaGCTCAAGAGTCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTAPLT*LKSLAP
Trigger: GGGGGCCAGACTCTTGAGCCAGGTAAGGGGAGCAGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGGTCTGAGAACTGTTaGTTCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDWSENC*FHPPES
Trigger: AGACTCTGGGGGATGGAATCAACAGTTCTCAGACCA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAGCAGTAAGTACAAGTaGTACAGCACAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSSKYK*YSTSPA
Trigger: AGCTGGGCTTGTGCTGTATCACTTGTACTTACTGCT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGCATTGACACCATATaGATAGTTGAGCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSIDTI*IVEPGT
Trigger: TGTACCGGGCTCAACTATTCATATGGTGTCAATGCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTACTCAGAGACTTGTTaGGTTCTTGAACAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDYSETC*VLEQKS
Trigger: TGACTTTTGTTCAAGAACTCAACAAGTCTCTGAGTA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTISICGD*SVIGES
Trigger: AGATTCTCCAATAACACTGCAGTCCCCACATATTGA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: PSATFIYNPRTTPPSTALSICGD*SVIGES
Trigger: AGATTCTCCAATAACACTGCAGTCCCCACATATTGA...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVSICGD*SVIGES
Trigger: AGATTCTCCAATAACACTGCAGTCCCCACATATTGA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTTTGGGCTCTGTGGCTaGCCTTGGGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNFGLCG*PWGSSS
Trigger: GGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCCAAA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCATCTGACACTGGAATaGTCTCAGTGGAATCTACAA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEHLTLE*SQWNLQ
Trigger: TTGTAGATTCCACTGAGAGCATTCCAGTGTCAGATG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPPEPV*ATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYPPEPV*ATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGAGACAGACGGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDRDRRM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACACCACAGCAGGTACTTaGTCTTACAGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDTTAGT*SYSPHC
Trigger: GCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGAAGACACTGCTGGTTaGAGAAATGACGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDEDTAG*RNDGSA
Trigger: GGCAGATCCGTCATTTCTGCAACCAGCAGTGTCTTC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTTGGCATATTTTGACTaGACCCAGCACTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLAYFD*TQHFQA
Trigger: TGCTTGGAAGTGCTGGGTGCAGTCAAAATATGCCAA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGCACAACAGGAGTCTaGTCCCCGTACTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSCTTGV*SPYLVI
Trigger: AATGACTAAGTACGGGGAGCAGACTCCTGTTGTGCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCCACAGATCCCATCCTaGATGACTCAAGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDPQIPS*MTQGPI
Trigger: TATGGGACCTTGAGTCATGCAGGATGGGATCTGTGG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCTCCCTGAGTCTTCCTaGAGGAGCTCCCTGTATTAT +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDLPESS*RSSLYY
Trigger: ATAATACAGGGAGCTCCTGCAGGAAGACTCAGGGAG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATGGCCCATCCTCGAGTTaGGGCAGTCTGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNGPSSS*GSLGFQ
Trigger: CTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCC...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTGCCCCAGCAACTCAGTaGCTCCATCCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPAPATQ*LHPGLQ
Trigger: CTGGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGC...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACATTTGCCCCAGCCCCTaGATCAGGTGGTACCACCTC +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYICPSP*IRWYHL
Trigger: GAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAAT...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACACTGGAATGCTCTCAGTaGAATCTACAACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTLECSQ*NLQPQV
Trigger: AACCTGAGGTTGTAGATTCCACTGAGAGCATTCCAG...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDDVQNS*KEPPEP
Trigger: TGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNIGRCC*ASYRER
Trigger: TCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGAT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCAGGGCTTGTGCGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSGLVR*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCGCACAAGCCCTGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTATTCCCATTTTCCTCTaGGGTCCTCACTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSIPIFL*GPHCVA
Trigger: AGCAACACAGTGAGGACCCCAGAGGAAAATGGGAAT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCTGTTTGACTTCCTTTaGACTTCATCTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLFDFL*TSSPPC
Trigger: GCAAGGTGGAGATGAAGTCCAAAGGAAGTCAAACAG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCAGCACGATCACCTGTaGCTTCCACTCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDQHDHL*LPLFCL
Trigger: CAAACAGAAGAGTGGAAGCCACAGGTGATCGTGCTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGATGGGCACTGGGATaGGCAGCACGATCACCTGTG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRWALG*AARSPV
Trigger: CACAGGTGATCGTGCTGCCCATCCCAGTGCCCATCT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCACGAAGATGGGCACTaGGATGGGCAGCACGATCAC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYHEDGH*DGQHDH
Trigger: GTGATCGTGCTGCCCATCCCAGTGCCCATCTTCGTG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACACGAAGATGGGCACTaGGATGGGCAGCACGATCAC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQHEDGH*DGQHDH
Trigger: GTGATCGTGCTGCCCATCCCAGTGCCCATCTTCGTG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTGTTGGGGAGGAGTGTaGGCTGCCAGGTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYCWGGV*AARYSE
Trigger: CTCTGAGTACCTGGCAGCCCACACTCCTCCCCAACA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTGTGTTTTATGTAAATaGTCCCCTCATCGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDCVLCK*SPHRFH
Trigger: ATGAAAGCGATGAGGGGACCATTTACATAAAACACA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTATGCGGTGGTGAGATaGTGCCAACAACCAATTATT +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEYAVVR*CQQPII
Trigger: AATAATTGGTTGTTGGCACCATCTCACCACCGCATA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAAGCTAATTGTTTTCTaGGACCTCCAATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVKLIVF*DLQCKM
Trigger: CATCTTGCATTGGAGGTCCCAGAAAACAATTAGCTT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAAGCTAATTGTTTTCTaGGACCTCCAATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTKLIVF*DLQCKM
Trigger: CATCTTGCATTGGAGGTCCCAGAAAACAATTAGCTT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCAACAGGGAAAGAAGTaGGTACCCCCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDQQGKK*VPPLPE
Trigger: TTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATACACAAGGGTGGGCATaGCTCACTGAAGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYTQGWA*LTEGTG
Trigger: GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTACTGGCTCAAGAGTCTaGCCCCCGTCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPTGSRV*PPSHPA
Trigger: AGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373978.1
ENST00000373981.5
CDS-3UTR CCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGTCCATGAGTATGGCTaGATATGTACTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTVHEYG*ICTGSR
Trigger: TCTTGAGCCAGTACATATCCAGCCATACTCATGGAC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373978.1
ENST00000373981.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCTCCTCTCATTCAAATaGTTCCCGGTCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLLSFK*FPVPSP
Trigger: GGGGGAGGGGACCGGGAACCATTTGAATGAGAGGAG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPSGEAG*RAEELR
Trigger: CCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCCATTGGCATATTTTaGCTGCACCCAGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSIGIF*LHPALP
Trigger: TGGAAGTGCTGGGTGCAGTCAAAATATGCCAATGGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTACTCAGAGACTTGTTaGGTTCTTGAACAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTYSETC*VLEQKS
Trigger: TGACTTTTGTTCAAGAACTCAACAAGTCTCTGAGTA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCAGCCAGGATGCGATTaGGCATGCTCTCCAACATGC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYQPGCD*ACSPTC
Trigger: GCATGTTGGAGAGCATGCTCAATCGCATCCTGGCTG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATATCTCCTGCATCCCATaGCAGGGTTCCCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNISCIP*QGSLRT
Trigger: GGTCCTGAGGGAACCCTGGCATGGGATGCAGGAGAT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGGGGAGCCCCTTCTTaGAGTAGCTATGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRGAPS*SSYGGG
Trigger: ACCACCTCCATAGCTACTGCAAGAAGGGGCTCCCCT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTGCAGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACTGC...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTSRSPS*RRYRSF
Trigger: AAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSRSPS*RRYRSF
Trigger: AAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPPPEPV*ATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGG...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGAAGCAAGAATCGCTaGAGAGCCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRSKNR*RAGVPR
Trigger: GCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAGAAGCAAGAATCGCTaGAGAGCCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYRSKNR*RAGVPR
Trigger: GCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCT...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATTCTCCTGCCGACAGTaGTCACACTGGGACACCACA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQFSCRQ*SHWDTT
Trigger: TGTGGTGTCCCAGTGTGAGCACTGTCGGCAGGAGAA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGTACACTTGCGGGACTaGCGCACCACATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQVHLRD*RTTLVK
Trigger: CTTCACCAATGTGGTGCGGCAGTCCCGCAAGTGTAC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGCATGCTCTCCAACATaGTGCGGTCCATGGGGATCA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQACSPT*CGPWGS
Trigger: TGATCCCCATGGACCGCAGCATGTTGGAGAGCATGC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGCACAACAGGAGTCTaGTCCCCGTACTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDCTTGV*SPYLVI
Trigger: AATGACTAAGTACGGGGAGCAGACTCCTGTTGTGCA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAAGGGGACAGGAGTCTaGACAACAGGAGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYKGTGV*TTGVCS
Trigger: GGAGCAGACTCCTGTTGTGCAGACTCCTGTCCCCTT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTTCTGGGACCTCCAATaGAAGATGGGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDFWDLQ*KMGKRE
Trigger: TTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCCCAAACCAGGTCCTaGAAAGCTACCCCCTACTCT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPQTRS*KATPYS
Trigger: AGAGTAGGGGGTAGCTTTGCAGGACCTGGTTTGGGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGTCAGGCCATCTCCTaGCAAGGAAGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSQAIS*QGRMCR
Trigger: CCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATGTGCACAAGTCATCTTaGTGCCCACTGCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNVHKSS*CPLQSA
Trigger: GGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCAC...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACCAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYQNRFC*PSWKRS
Trigger: GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTG...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACAGAACCGCTTTTGTTaGCCCTCGTGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQQNRFC*PSWKRS
Trigger: GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATCACGGCAGCAGAACTaGAACACTTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSRQQN*NTWSCQ
Trigger: CTGGCAGGACCAAGTGTTCCAGTTCTGCTGCCGTGA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCTGTTTGACTTCCTTTaGACTTCATCTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSLFDFL*TSSPPC
Trigger: GCAAGGTGGAGATGAAGTCCAAAGGAAGTCAAACAG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCAGATGCATAGGCACTaGCACGAAGATGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYQMHRH*HEDGHW
Trigger: CCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGGCACCGGGACTTTCTaGCAGTACAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYGTGTF*QYRCIG
Trigger: GCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSPSAL*LLTRSQ
Trigger: TTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGAACACCGTATTGTTaGGGAGGAGTGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRTPYC*GGVWAA
Trigger: GGCAGCCCACACTCCTCCCCAACAATACGGTGTTCT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTTCCTCTGGCGGACTaGGGCATAGTAGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYFPLAD*GIVADA
Trigger: AGCATCCGCTACTATGCCCCAGTCCGCCAGAGGAAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAAAGATGGATATGGATaGCACACGAGCTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDKDGYG*HTSSVQ
Trigger: CTGGACTGAGCTCGTGTGCCATCCATATCCATCTTT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTGTGTTTTATGTAAATaGTCCCCTCATCGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: GHGSLKGQARRLRTIYTICVLCK*SPHRFH
Trigger: ATGAAAGCGATGAGGGGACCATTTACATAAAACACA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTATGCGGTGGTGAGATaGTGCCAACAACCAATTATT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCYAVVR*CQQPII
Trigger: AATAATTGGTTGTTGGCACCATCTCACCACCGCATA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAAGCTAATTGTTTTCTaGGACCTCCAATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEKLIVF*DLQCKM
Trigger: CATCTTGCATTGGAGGTCCCAGAAAACAATTAGCTT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAATGGCTCTGGCTCAGTaGCAACGCCTGTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQMALAQ*QRLCSN
Trigger: GTTACTGCACAGGCGTTGCCACTGAGCCAGAGCCAT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGGGTTTGGCCTTGCTaGTTTCTCCATTGGCATATT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSWVWPC*FLHWHI
Trigger: AATATGCCAATGGAGAAACCAGCAAGGCCAAACCCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS-3UTR TCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCTTGGAGAAAGTGGTaGGGCAGGATGACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSWRKW*GRMTSR
Trigger: TCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATTTGACTCAGGAGACTaGCTGTTCAGGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQFDSGD*LFRRLS
Trigger: CGAGAGCCTCCTGAACAGTCAGTCTCCTGAGTCAAA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTACTCAGAGACTTGTTaGGTTCTTGAACAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEYSETC*VLEQKS
Trigger: TGACTTTTGTTCAAGAACTCAACAAGTCTCTGAGTA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGCCGCACCACATTGGTaGAGGAGAGTTGCATGTGTT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQAAPHW*RRVACV
Trigger: AACACATGCAACTCTCCTTCACCAATGTGGTGCGGC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATAGCCCACTCTACCCGTaGTCCCCTCCTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNSPLYP*SPPLIQ
Trigger: TTGAATGAGAGGAGGGGATCACGGGTAGAGTGGGCT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373981.5
CDS-3UTR GCA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATCAATATGTGGGGACTaGAGTGTTATTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTSICGD*SVIGES
Trigger: AGATTCTCCAATAACACTGCAGTCCCCACATATTGA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSICGD*SVIGES
Trigger: AGATTCTCCAATAACACTGCAGTCCCCACATATTGA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYRFWRF*SPNALA
Trigger: AGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCT...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSRSPS*RRYRSF
Trigger: AAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATAGAAGCAAGAATCGCTaGAGAGCCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNRSKNR*RAGVPR
Trigger: GCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGGGCCAGTGAGCCCTaGCTGCTTCACTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRASEP*LLHFVR
Trigger: TCTTACAAAGTGAAGCAGGCAGGGCTCACTGGCCCT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAATCGGAGTTTCTCATaGAAGAGTTTCTCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDNRSFS*KSFSCR
Trigger: TCGGCAGGAGAAACTCTTGCATGAGAAACTCCGATT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCACACAGCCTTCGCTaGAGAAGCTTTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYAHSLR*RSFSPL
Trigger: GAGTGGAGAAAAGCTTCTGCAGCGAAGGCTGTGTGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCTTACAGTCCTCACTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSYSPH*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGTGAGGACTGTAAGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGAGACGCCCCGATTCTaGATCAGTGGCTTACACATG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYETPRF*ISGLHM
Trigger: CATGTGTAAGCCACTGATGCAGAATCGGGGCGTCTC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACTTCATCTCCACCTTaGAGGAGACGCCCCGATTCT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTSSPP*RRRPDS
Trigger: AGAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATCTGCCTCCAAGTCTTaGCCAGGCTCATCCAAGACA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSASKS*PGSSKT
Trigger: TGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCTGCCTCCAAGTCTTaGCCAGGCTCATCCAAGACA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSASKS*PGSSKT
Trigger: TGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGTGGGTACCCCCTTTaGCAGAAGCTAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSGYPL*QKLIVF
Trigger: GAAAACAATTAGCTTCTGGCAAAGGGGGTACCCACT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACAGTGGCAACGCCTGTaGAGTAACCGTTACTGCTTG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQQWQRL*SNRYCL
Trigger: CAAGCAGTAACGGTTACTGCACAGGCGTTGCCACTG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDLLFNM*GLQCYW
Trigger: CCAATAACACTGCAGTCCCCACATATTGAAGAGGAG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTAGTCAGGCCATCTCCTaGCAAGGAAGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPSQAIS*QGRMCR
Trigger: CCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATCAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNQDSRS*CRCKPH
Trigger: GTGGGGCTTACATCTACACCAAGACCGGGAGTCCTG...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTTTTGTTGGCCCTCGTaGAAGAGGAGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNFCWPS*KRSSGP
Trigger: TGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCCTTCAGCTCCTCAATaGTCTCTACAATCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDPSAPQ*SLQSCL
Trigger: CAGACAAGATTGTAGAGACCATTGAGGAGCTGAAGG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAAGACCAGGGCCCCATaGTTGTCAAGTGGTACGGAA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYKTRAP*LSSGTE
Trigger: TTCCGTACCACTTGACAACCATGGGGCCCTGGTCTT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGAAAACGGGCAAGCTaGCTTTTGCCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRKRAS*LLPITG
Trigger: CCCAGTGATGGGCAAAAGCCAGCTTGCCCGTTTTCT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCTACCTATGCGGGATaGGTCAGGAAACCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSTYAG*VRKPKA
Trigger: GGCTTTGGGTTTCCTGACCCATCCCGCATAGGTAGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACCCACAACCGAGTCCTTaGTGTTCCAGATCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYPQPSP*CSRSPA
Trigger: AGCAGGAGATCTGGAACACCAAGGACTCGGTTGTGG...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACAGGTCGGGTTAAATaGCTCTGGCTCAGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTGRVK*LWLSGN
Trigger: GTTGCCACTGAGCCAGAGCCATTTAACCCGACCTGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACTGGTCTGAGAACTGTTaGTTCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYWSENC*FHPPES
Trigger: AGACTCTGGGGGATGGAATCAACAGTTCTCAGACCA...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATGGTCTGAGAACTGTTaGTTCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQWSENC*FHPPES
Trigger: AGACTCTGGGGGATGGAATCAACAGTTCTCAGACCA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTCTTGGAGAAAGTGGTaGGGCAGGATGACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNSWRKW*GRMTSR
Trigger: TCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCGAGAATATCCTCTTTaGTACGCATGGGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYREYPL*YAWVWG
Trigger: GCCCCAAACCCATGCGTATCAAAGAGGATATTCTCG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGAATTCATAGAACTTaGCAGGGCAGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRIHRT*QGSGGD
Trigger: ATCCCCTCCGCTGCCCTGTCAAGTTCTATGAATTCT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCATCTGACACTGGAATaGTCTCAGTGGAATCTACAA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDHLTLE*SQWNLQ
Trigger: TTGTAGATTCCACTGAGAGCATTCCAGTGTCAGATG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNWCPAM*TSHLGA
Trigger: GGCACCAAGATGACTTGTGCACATTGCCGGACACCA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGGTACAGGTCTTTTTaGCCGAGGGCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRYRSF*PRASWR
Trigger: TCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGAAGACACTGCTGGTTaGAGAAATGACGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYEDTAG*RNDGSA
Trigger: GGCAGATCCGTCATTTCTGCAACCAGCAGTGTCTTC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTCTGGCAGTACAGATaGATAGGCACTGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYFWQYR*IGTGTK
Trigger: CTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATATTCTTAGGGAAGTCTaGCTCCAAGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYILREV*LQVLPR
Trigger: CCTGGGCAAGACTTGGAGGCAGACTTCCCTAAGAAT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGCATGGGTTTGGCCTTaGTGGTTTCTCCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQAWVWP*WFLHWH
Trigger: ATGCCAATGGAGAAACCAGCAAGGCCAAACCCATGC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATCGAGTTGGGGCAGTCTaGGATTCCAGTAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNRVGAV*DSSRSS
Trigger: AGAGGATCTACTGGAATCCCAGACTGCCCCAACTCG...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACCCACAACCGAGTCCTTaGTGTTCCAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYPQPSP*CSRSPS
Trigger: AGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGG...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACATGCTGCGGTCCATaGGGATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTCCGP*GSQNTR
Trigger: TCTGGTATTCTGTGATCCCCATGGACCGCAGCATGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACAACAGGGAAAGAAGTaGGTACCCCCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQQQGKK*VPPLPE
Trigger: TTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTCCCTGTATTATCTATaGAGTTTTCCTCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSLYYL*SFPPSP
Trigger: TGGTGAGGGAGGAAAACTCCATAGATAATACAGGGA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373998.5
CDS-3UTR TCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTGGTCTGAGAACTGTTaGTTCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNWSENC*FHPPES
Trigger: AGACTCTGGGGGATGGAATCAACAGTTCTCAGACCA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTTGGTCTGAGAACTGTTaGTTCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPWSENC*FHPPES
Trigger: AGACTCTGGGGGATGGAATCAACAGTTCTCAGACCA...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATTTTCTCCACTCCGCTaGATCGGAGTTTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQFSPLR*IGVSHA
Trigger: TGCATGAGAAACTCCGATTCAGCGGAGTGGAGAAAA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATCCATTGGCATATTTTaGCTGCACCCAGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSIGIF*LHPALP
Trigger: TGGAAGTGCTGGGTGCAGTCAAAATATGCCAATGGA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGGTAGTAAAGGTCCGTaGAAATGTTCACCATCCGGT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYGSKGP*KCSPSG
Trigger: ACCGGATGGTGAACATTTTCACGGACCTTTACTACC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTATTTCTCCCAGCCCTTaGCCCATCAGCCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPISPSP*PISHLY
Trigger: ATAAAGGTGGCTGATGGGTCAAGGGCTGGGAGAAAT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATAGGTACAGGTCTTTTTaGCCGAGGGCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNRYRSF*PRASWR
Trigger: TCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATAGAGACAGACGGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNRDRRM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATCCAAGCAGGTTGTGTTaGAGAACCGCTTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNPSRLC*RTAFVG
Trigger: GCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGG...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATTGGTGAAGGAGAGTTaGATGTGTTCCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLVKES*MCSSAV
Trigger: GACAGCTGAGGAACACATGCAACTCTCCTTCACCAA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTGGTGAAGGAGAGTTaGATGTGTTCCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLVKES*MCSSAV
Trigger: GACAGCTGAGGAACACATGCAACTCTCCTTCACCAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACGGACTGCAGTGTTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYGLQCY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCC...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTCCACAACCGAGTCCTTaGTGTTCCAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPPQPSP*CSRSPS
Trigger: AGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGG...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPDVQNS*KEPPEP
Trigger: TGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATC...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNTSPVF*HMLQRV
Trigger: TACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNCWPGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACTTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYFSVPC*PGIWRS
Trigger: GCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAA...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGGGAACAGAACAAGCTaGTCTTGCCATTACGATCCA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYGNRTS*SCHYDP
Trigger: TGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTTGACCCTTCCTCATaGTTCGGGGAAGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYFDPSS*FGEGLV
Trigger: AACAAGACCTTCCCCGAACCATGAGGAAGGGTCAAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATCAGATAAGACCTTTTaGCATGGTGCTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSDKTF*HGAGEE
Trigger: CTCTTCCCCAGCACCATGCCAAAAGGTCTTATCTGA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATAATCACTGGGGTCCATaGGTATGGCTGGATATGTAC +
Preference number: 4 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNNHWGP*VWLDMY
Trigger: GTACATATCCAGCCATACTCATGGACCCCAGTGATT...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR TCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGAACAAGCTGGTCTTaGCATTACGATCCACATGTG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRTSWS*HYDPHV
Trigger: CACATGTGGATCGTAATGGCAAGACCAGCTTGTTCT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAATCGGAGTTTCTCATaGAAGAGTTTCTCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYNRSFS*KSFSCR
Trigger: TCGGCAGGAGAAACTCTTGCATGAGAAACTCCGATT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGCGGTGGTGAGATGGTaGCAACAACCAATTATTTCA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQAVVRW*QQPIIS
Trigger: TGAAATAATTGGTTGTTGGCACCATCTCACCACCGC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCGGTGGTGAGATGGTaGCAACAACCAATTATTTCA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYAVVRW*QQPIIS
Trigger: TGAAATAATTGGTTGTTGGCACCATCTCACCACCGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCAGAAGGTAGTTTTTaGCTTGGGAGGTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSEGSF*LGRSVH
Trigger: ATGGACAGACCTCCCAAGGCAAAAACTACCTTCTGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACCTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYLLFNM*GLQCYW
Trigger: CCAATAACACTGCAGTCCCCACATATTGAAGAGGAG...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLLFNM*GLQCYW
Trigger: CCAATAACACTGCAGTCCCCACATATTGAAGAGGAG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACCTGGAATGCTCTCAGTaGAATCTACAACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYLECSQ*NLQPQV
Trigger: AACCTGAGGTTGTAGATTCCACTGAGAGCATTCCAG...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACTTGCACCAGACACATaGGTACACACGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLAPDT*VHTCVF
Trigger: AAAAACACACGTGTGTACCCATGTGTCTGGTGCAAG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCTTGCACCAGACACATaGGTACACACGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLAPDT*VHTCVF
Trigger: AAAAACACACGTGTGTACCCATGTGTCTGGTGCAAG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCTTCAGCTCCTCAATaGTCTCTACAATCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPSAPQ*SLQSCL
Trigger: CAGACAAGATTGTAGAGACCATTGAGGAGCTGAAGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATGTGAAAGATGGATATaGATGGCACACGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQCERWI*MAHELS
Trigger: ACTGAGCTCGTGTGCCATCCATATCCATCTTTCACA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTGTGAAAGATGGATATaGATGGCACACGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYCERWI*MAHELS
Trigger: ACTGAGCTCGTGTGCCATCCATATCCATCTTTCACA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCATGGCAACCTAAGATaGCAGAGAGACAAACACAGA +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYHGNLR*QRDKHR
Trigger: TCTGTGTTTGTCTCTCTGCCATCTTAGGTTGCCATG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACATGGCAACCTAAGATaGCAGAGAGACAAACACAGA +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQHGNLR*QRDKHR
Trigger: TCTGTGTTTGTCTCTCTGCCATCTTAGGTTGCCATG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR TCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTCCACTCTTCTGTTTaGCTTCCTTTGGACTTCATC +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYFHSSV*LPLDFI
Trigger: GATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSRSPS*RRYRSF
Trigger: AAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATCACAGGGATTGTGTTaGTGTTCTCCACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQSQGLC*CSPLWF
Trigger: AAACCAAAGTGGAGAACAGCAACACAATCCCTGTGA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373998.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTCTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPLLFNM*GLQCYW
Trigger: CCAATAACACTGCAGTCCCCACATATTGAAGAGGAG...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYSICGD*SVIGES
Trigger: AGATTCTCCAATAACACTGCAGTCCCCACATATTGA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR GCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTCATCTGACACTGGAATaGTCTCAGTGGAATCTACAA +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPHLTLE*SQWNLQ
Trigger: TTGTAGATTCCACTGAGAGCATTCCAGTGTCAGATG...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR GCA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: NITDTIETPFICFISPSPSRSPS*RRYRSF
Trigger: AAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CCA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAAGCTAATTGTTTTCTaGGACCTCCAATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYKLIVF*DLQCKM
Trigger: CATCTTGCATTGGAGGTCCCAGAAAACAATTAGCTT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS GCA 90 bp CGAGTAGCGTCGGCGGGATCCCCAGACTGGGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAGAGACAGACGGATGTGCAGAACTCA +
Preference number: 5 (lower is better)
Translates to: RVASAGSPDWGIGRC*WASYRERQTDVQNS
Trigger: TGAGTTCTGCACATCCGTCTGTCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGCCGACGCTACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TCTGGCGGACTGGGGCATAGTAGCGGATGCTCACCACCTTGGTGGTaGCCCGAGGGGTGGTACACTTGCGGGACTGCCGCACCACATTGG +
Preference number: 5 (lower is better)
Translates to: SGGLGHSSGCSPPWW*PEGWYTCGTAAPHW
Trigger: CCAATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp GTAGCGTCGGCGGGATCCCCAGACTGGGGGATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGACAGACGGATGTGCAGAACTCATGG +
Preference number: 5 (lower is better)
Translates to: VASAGSPDWGIGRCC*ASYRERQTDVQNSW
Trigger: CCATGAGTTCTGCACATCCGTCTGTCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGCCGACGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp TTCTGGCATATGCTGCAGCGAGTAGCGTCGGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGCTGGGCCTCATACAGGGAGAGACAG +
Preference number: 5 (lower is better)
Translates to: FWHMLQRVASAGSPD*GIGRCCWASYRERQ
Trigger: CTGTCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGCCGACGCTACTCGCTGCAGCATATGCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TGGCTGGATATGTACTGGCTCAAGAGTCTGGCCCCCGTCACACCCTaGTCGCCCTACCTCCTGGAGCCCACTCTACCCGTGATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: WLDMYWLKSLAPVTP*SPYLLEPTLPVIPS
Trigger: GGAGGGGATCACGGGTAGAGTGGGCTCCAGGAGGTAGGGCGAGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGTACATATCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373981.5
CDS GCA 90 bp ATCTGTCCACACCCCGAGCTCAGTACCACAGCCCGTGCTCCCCACTaGCCTCTTTCCCGCCTCGCTCGCATGCTGACCCTCCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: ICPHPELSTTARAPH*PLSRLARMLTLLTL
Trigger: CAAGGTAAGGAGGGTCAGCATGCGAGCGAGGCGGGAAAGAGGGCAGTGGGGAGCACGGGCTGTGGTACTGAGCTCGGGGTGTGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS GCA 90 bp CTGCAGAGCGCCCGGCCCTTTGTGACACACTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCCGGAATGGCACAAAGTCCTCATCAT +
Preference number: 5 (lower is better)
Translates to: LQSARPFVTHLSVGT*EESAGAGMAQSPHH
Trigger: ATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGGCCGGGCGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp GCGCTGATAGGCAGTCTGCCCCTTCTGCAGTGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCCCACTGCAGAGCGCCCGGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: ALIGSLPLLQWCPAM*TSHLGAHCRAPGPL
Trigger: CAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGAAGGGGCAGACTGCCTATCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp GACACTGCTGGTTGCAGAAATGACGGATCTGCCCACGCCAGTGGATaGTCTCCAGCAGCTTCCCCTGGCGCTTACACGCATGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: DTAGCRNDGSAHASG*SPAASPGAYTHGTG
Trigger: CCCGGTGCCATGCGTGTAAGCGCCAGGGGAAGCTGCTGGAGACCATCCACTGGCGTGGGCAGATCCGTCATTTCTGCAACCAGCAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp CATGCTCCTCCCCTTGGAGATCGGGCCAGCTTAGAGATGGAAGGCTaGCTGCCCTCCCTGGAGATCTGTCCACACCCCGAGCTCAGTACC +
Preference number: 5 (lower is better)
Translates to: HAPPLGDRASLEMEG*LPSLEICPHPELST
Trigger: GGTACTGAGCTCGGGGTGTGGACAGATCTCCAGGGAGGGCAGCCAGCCTTCCATCTCTAAGCTGGCCCGATCTCCAAGGGGAGGAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS CCA 90 bp CGTTGGGCCCTTTCTTTCCCCCGGGATAAGCCATGCTCCTCCCCTTaGAGATCGGGCCAGCTTAGAGATGGAAGGCTGGCTGCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: RWALSFPRDKPCSSP*RSGQLRDGRLAALP
Trigger: AGGGAGGGCAGCCAGCCTTCCATCTCTAAGCTGGCCCGATCTCCAAGGGGAGGAGCATGGCTTATCCCGGGGGAAAGAAAGGGCCCAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS-3UTR CAA 90 bp GAGCTCAGGGCCAGGACTCCCGGTCTTGGTGTAGATGTAAGCCCCACACTGGTCGGGCCCATCCTCGAGTaGGGGCAGTCTGGGATTCCA +
Preference number: 5 (lower is better)
Translates to: ELRARTPGLGVDVSPTLVGPILE*GQSGIP
Trigger: TGGAATCCCAGACTGCCCCAACTCGAGGATGGGCCC...GACCAGTGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGGCACCGGGCAGCCTaGCAGTACCACAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPWHRAA*QYHSRY
Trigger: GTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCCA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCGGCAGCACCAAGGATaGGTGCTTGCCGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRQHQG*VLAEGV
Trigger: CACCCCCTCGGCAAGCACCAATCCTTGGTGCTGCCG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCGGATGCTCACCACCTaGGTGGTGCCCCGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRMLTT*VVPRGV
Trigger: CACCCCTCGGGGCACCACCAAGGTGGTGAGCATCCG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCGGCCCCACCTTCTaGTACGCCCCCAAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: VLQNRFCWPSWKRSSGPGLGPTF*YAPKQV
Trigger: AACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAG...TCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGTGCCCCTCCTTCCCTaGTCTGCAGCCACGGGGCCC +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDVPLLP*SAATGP
Trigger: GGGCCCCGTGGCTGCAGACAAGGGAAGGAGGGGCAC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS GCA 90 bp GCCCCTTCTGCAGTGGTGTCCGGCAATGTGCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGGCCCTTTGTGACACACTTGAGCGTA +
Preference number: 5 (lower is better)
Translates to: APSAVVSGNVHKSSW*PLQSARPFVTHLSV
Trigger: TACGCTCAAGTGTGTCACAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp CTCACCACCTTGGTGGTGCCCCGAGGGGTGGTACACTTGCGGGACTaGCGCACCACATTGGTGAAGGAGAGTTGCATGTGTTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LTTLVVPRGVVHLRD*RTTLVKESCMCSSA
Trigger: AGCTGAGGAACACATGCAACTCTCCTTCACCAATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCACCAAGGTGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp TCTGCCCCTTCTGCAGTGGTGTCCGGCAATGTGCACAAGTCATCTTaGTGCCCACTGCAGAGCGCCCGGCCCTTTGTGACACACTTGAGC +
Preference number: 5 (lower is better)
Translates to: SAPSAVVSGNVHKSS*CPLQSARPFVTHLS
Trigger: GCTCAAGTGTGTCACAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGAAGGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp GGCACAGGCACCGGGATAGGCATCGAGAAAGGCACCGGGACTTTCTaGCAGTACAGATGCATAGGCACTGGCACGAAGATGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: GTGTGIGIEKGTGTF*QYRCIGTGTKMGTG
Trigger: CCCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCCTTTCTCGATGCCTATCCCGGTGCCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCAGGTGAACAGGAATTaGCCCCAGCCCCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPQVNRN*PQPLDQ
Trigger: CTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPCAQVI*VPTAER
Trigger: GCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGACTTCATCTCCACCTaGCAGGAGACGCCCCGATTC +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPDFIST*QETPRF
Trigger: GAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGTC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTCGGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPSASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCCGA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGTGCCCCTCCTTCCCTaGTCTGCAGCCACGGGGCCC +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTVPLLP*SAATGP
Trigger: GGGCCCCGTGGCTGCAGACAAGGGAAGGAGGGGCAC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS TCA 90 bp TTTGGTCTGAGAACTGTTGATTCCATCCCCCAGAGTCTCTCCCACTaGAGGGCTAGGCGGGGCATTTGGGCTCTGTGGCTGCCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: FGLRTVDSIPQSLSH*RARRGIWALWLPLG
Trigger: CCCCAAGGGCAGCCACAGAGCCCAAATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTGGGGGATGGAATCAACAGTTCTCAGACCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 90 bp CCTGCCGACAGTGCTCACACTGGGACACCACACCCCGAAGCCGCTTaGAGTCCTCACAGCAATCACGGCAGCAGAACTGGAACACTTGGT +
Preference number: 5 (lower is better)
Translates to: PADSAHTGTPHPEAA*SPHSNHGSRTGTLG
Trigger: ACCAAGTGTTCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTGTCCCAGTGTGAGCACTGTCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp GCTGGAACTTGGTCCAGCAGCTGGGGCTGCAGAACTGGTAGACTGTaGGGTCAACCTTGTTGTAGTAACAGGGGTCAGAGAGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: AGTWSSSWGCRTGRL*GQPCCSNRGQRGCG
Trigger: GCCGCAGCCTCTCTGACCCCTGTTACTACAACAAGGTTGACCGCACAGTCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGTTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp GGGATAGGCATCGAGAAAGGCACCGGGACTTTCTGGCAGTACAGATaGATAGGCACTGGCACGAAGATGGGCACTGGGATGGGCAGCACG +
Preference number: 5 (lower is better)
Translates to: GIGIEKGTGTFWQYR*IGTGTKMGTGMGST
Trigger: CGTGCTGCCCATCCCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCCTTTCTCGATGCCTATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp CTCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LGPTFLYAPKQVVLQNRFAEPLL*ALVEEE
Trigger: CTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGC...AAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNAEPLL*ALVEEE
Trigger: CTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGACTGCCGCACCACATaGGTGAAGGAGAGTTGCATG +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPDCRTT*VKESCM
Trigger: CATGCAACTCTCCTTCACCAATGTGGTGCGGCAGTC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCGAGGGGTGGTACACTaGCGGGACTGCCGCACCACA +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDRGVVH*RDCRTT
Trigger: TGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCGGATGCTCACCACCTaGGTGGTGCCCCGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRMLTT*VVPRGV
Trigger: CACCCCTCGGGGCACCACCAAGGTGGTGAGCATCCG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS TCA 90 bp GGTCTTTTTGCCCGAGGGCTTCTTGGAGAAAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGGCAGCCCCTTGCGCTGATAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GLFARGLLGESGEAG*RAEELRQPLALIGS
Trigger: ACTGCCTATCAGCGCAAGGGGCTGCCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGAAGCCCTCGGGCAAAAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TACACGCATGGCACCGGGCAGCCTTGCAGTACCACAGCAGGTACTTaGTCTTACAGTCCTCACTGCAGAAGTCCCAGGTGCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: YTHGTGQPCSTTAGT*SYSPHCRSPRCCHP
Trigger: TGGATGGCAGCACCTGGGACTTCTGCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCCATGCGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS CCA 90 bp TGCTGGGCCTCATACAGGGAGAGACAGACGGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCAGTCTGCGCCACAACCGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: CWASYRERQTDVQNS*KEPPEPVCATTESL
Trigger: CAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCTCCCTGTATGAGGCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCCTTTGTGACACACTaGAGCGTAGGGACATGCGAG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPFVTH*SVGTCE
Trigger: CTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAAGGTACAGGTCTTTTaGCCCGAGGGCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPKVQVF*PEGFLE
Trigger: CTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNATTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGTACCACGCTGCCATaGCTGACCTCGTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGCTTLP*LTSCRT
Trigger: GGTCCTGCACGAGGTCAGCAATGGCAGCGTGGTACA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CTCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTACGCCCCCAAGCAGGTaGTGTTGCAGAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: LGPTFLYAPKQVVLQNRFTPPSR*CCRTAF
Trigger: AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGT...AAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCAGAACTGGAACACTaGGTCCTGCCAGTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNAELEH*VLPVQD
Trigger: GTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGGTGCTGCCATCCAGTaGCTCGGTGACTCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTGAAIQ*LGDSAL
Trigger: CAGCGCGGAGTCACCGAGCAACTGGATGGCAGCACC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGGTGCTGCCATCCAGTaGCTCGGTGACTCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIGAAIQ*LGDSAL
Trigger: CAGCGCGGAGTCACCGAGCAACTGGATGGCAGCACC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCAGGGTGTCTGGGGTTTaGACTCAGGAGACTGACTGT +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPRVSGV*TQETDC
Trigger: ACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCCT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAAGCACCAGCCGCTTTaGACCCTTCCTCATGGTTCG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNKHQPL*TLPHGS
Trigger: CGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCTT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCGAGGGGTGGTACACTaGCGGGACTGCCGCACCACA +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRGVVH*RDCRTT
Trigger: TGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCGGATGCTCACCACCTaGGTGGTGCCCCGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERMLTT*VVPRGV
Trigger: CACCCCTCGGGGCACCACCAAGGTGGTGAGCATCCG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCACAGCCAGGATGCGATaGAGCATGCTCTCCAACATG +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPTARMR*SMLSNM
Trigger: CATGTTGGAGAGCATGCTCAATCGCATCCTGGCTGT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCGGCAGCACCAAGGATaGGTGCTTGCCGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRQHQG*VLAEGV
Trigger: CACCCCCTCGGCAAGCACCAATCCTTGGTGCTGCCG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS TCA 90 bp AGAAGGTACAGGTCTTTTTGCCCGAGGGCTTCTTGGAGAAAGTGGTaGGGCAGGATGACGAGCAGAAGAGCTGAGGCAGCCCCTTGCGCT +
Preference number: 5 (lower is better)
Translates to: RRYRSFCPRASWRKW*GRMTSRRAEAAPCA
Trigger: AGCGCAAGGGGCTGCCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 90 bp CTGCCTCCAAGTCTTGCCCAGGCTCATCCAAGACATTGGCCATCTTaGCTGCCATGGCCAGGACATCATCTCGAGCAGGCCCAAACAGGT +
Preference number: 5 (lower is better)
Translates to: LPPSLAQAHPRHWPS*LPWPGHHLEQAQTG
Trigger: ACCTGTTTGGGCCTGCTCGAGATGATGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TTCTCCACTCCGCTGAATCGGAGTTTCTCATGCAAGAGTTTCTCCTaGCGACAGTGCTCACACTGGGACACCACACCCCGAAGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: FSTPLNRSFSCKSFS*RQCSHWDTTPRSRL
Trigger: CAAGCGGCTTCGGGGTGTGGTGTCCCAGTGTGAGCACTGTCGGCAGGAGAAACTCTTGCATGAGAAACTCCGATTCAGCGGAGTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TGCGGTCCATGGGGATCACAGAATACCAGAGAGGTGACTCGGCGATaGAGGACCGTTCAGGTTGCAGGTAGAACACATCGTTGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: CGPWGSQNTREVTRR*RTVQVAGRTHRCES
Trigger: GGACTCGCAACGATGTGTTCTACCTGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTCTCTGGTATTCTGTGATCCCCATGGACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp CAGACGGATGTGCAGAACTCATGGAAGGAGCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTGGTGTTCCAGATCTCCTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: QTDVQNSWKEPPEPV*ATTESLVFQISCSQ
Trigger: CTGAGAGCAGGAGATCTGGAACACCAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATCCGTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS CCA 90 bp GTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCCGGTCTTaGTGTAGATGTAAGCCCCACACTGGTCACAACAGTTGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: VGPRGRGAQGQDSRS*CRCKPHTGHNSWFS
Trigger: TGAAAACCAACTGTTGTGACCAGTGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGCAQVI*VPTAER
Trigger: GCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAAGGTACAGGTCTTTTaGCCCGAGGGCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNKVQVF*PEGFLE
Trigger: CTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCCCAAGCAGGTTGTGTaGCAGAACCGCTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNPKQVV*QNRFCW
Trigger: CCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGGTGCTGCCATCCAGTaGCTCGGTGACTCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEGAAIQ*LGDSAL
Trigger: CAGCGCGGAGTCACCGAGCAACTGGATGGCAGCACC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTACCACAGCAGGTACTaGCTCTTACAGTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPYHSRY*LLQSSL
Trigger: CAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGGCACCGGGCAGCCTaGCAGTACCACAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVWHRAA*QYHSRY
Trigger: GTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCCA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGGTATCCAGGTTGGGTaGGTTCTGCTGGCTATAGAA +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPGIQVG*VLLAIE
Trigger: TTCTATAGCCAGCAGAACCAACCCAACCTGGATACC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCTTACACATGGCAGCCTaGTTTTTGCGGGGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPLHMAA*FLRGVA
Trigger: AGCAACACCCCGCAAAAACAAGGCTGCCATGTGTAA...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGGTCAGATGAGGCCTaGTCTAACTCCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRSDEA*SNSSAS
Trigger: AGAGGCTGAGGAGTTAGACAAGGCCTCATCTGACCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCCTCCATTGGCATATTTaGACTGCACCCAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPLHWHI*TAPSTS
Trigger: GGAAGTGCTGGGTGCAGTCAAAATATGCCAATGGAG...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCGCGAGAATATCCTCTTaGATACGCATGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPARISS*IRMGLG
Trigger: CCCCAAACCCATGCGTATCAAAGAGGATATTCTCGC...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGAGAACACCGTATTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGENTVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAATACGGTGTTCTC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAAGAACATGAGGGTGTaGAGGAGGACAAAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNKNMRV*RRTKGE
Trigger: CTCGCCCTTTGTCCTCCTCAACACCCTCATGTTCTT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCAGGACCGTTCAGGTaGCAGGTAGAACACATCGTT +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNAGPFR*QVEHIV
Trigger: AACGATGTGTTCTACCTGCAACCTGAACGGTCCTGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCTCCTCGCCTGTCCTTaGACCACAGATCCCATCCTG +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGLLACP*TTDPIL
Trigger: CAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCAGGACCCGTGTTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPGPVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAACACGGGTCCTGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS TCA 90 bp CTCCAACATGCTGCGGTCCATGGGGATCACAGAATACCAGAGAGGTaGCTCGGCGATGCAGGACCGTTCAGGTTGCAGGTAGAACACATC +
Preference number: 5 (lower is better)
Translates to: LQHAAVHGDHRIPER*LGDAGPFRLQVEHI
Trigger: GATGTGTTCTACCTGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTCTCTGGTATTCTGTGATCCCCATGGACCGCAGCATGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp CAGACGGATGTGCAGAACTCATGGAAGGAGCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTGGTGTTCCAGATCTCCTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QTDVQNSWKEPPEPV*ATTESLVFQISFLQ
Trigger: CTGCAAGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATCCGTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp ACTGACTGTTCAGGAGGCTCTCGGGCCCACTCTGGGTATCCAGGTTaGGTTGGTTCTGCTGGCTATAGAAACGCAGAAGACACTGCTGGT +
Preference number: 5 (lower is better)
Translates to: TDCSGGSRAHSGYPG*VGSAGYRNAEDTAG
Trigger: ACCAGCAGTGTCTTCTGCGTTTCTATAGCCAGCAGAACCAACCCAACCTGGATACCCAGAGTGGGCCCGAGAGCCTCCTGAACAGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp GGACATGGCCACAGGACAGACATTGATGTGAAAGATGGATATGGATaGCACACGAGCTCAGTCCAGGTCTTCCTCCCCAGGACGACCCAG +
Preference number: 5 (lower is better)
Translates to: GHGHRTDIDVKDGYG*HTSSVQVFLPRTTQ
Trigger: CTGGGTCGTCCTGGGGAGGAAGACCTGGACTGAGCTCGTGTGCCATCCATATCCATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCAGGTGAACAGGAATTaGCCCCAGCCCCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDQVNRN*PQPLDQ
Trigger: CTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGATTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTACGCCCCCAAGCAGGTTTTGGTTTTCAGTCCCTaGTTGGCCCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: PLMHYSLGPTFLYAPKQVLVFSP*LARNLE
Trigger: CTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAA...AACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGVAEPL*LALVEE
Trigger: CTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATCGTGTGTTTTTCTTCTaGTACGCCCCCAAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRVFFF*YAPKQV
Trigger: AACCTGCTTGGGGGCGTACAAGAAGAAAAACACACG...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCTTGTGCGCTGGAACTaGGTCCAGCAGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPELVRWN*VQQLGL
Trigger: CAGCCCCAGCTGCTGGACCAAGTTCCAGCGCACAAG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGCAGAACTGGAACACTaGGTCCTGCCAGTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGAELEH*VLPVQD
Trigger: GTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTGC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGTPRSR*KSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGGTGCTGCCATCCAGTaGCTCGGTGACTCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCGAAIQ*LGDSAL
Trigger: CAGCGCGGAGTCACCGAGCAACTGGATGGCAGCACC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNVLHFG*RGCLGF
Trigger: AAACCCCAGACACCCTCTCAAACCAAAGTGGAGAAC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTCGGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDSASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCCGA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCGCAGCTCATCACCCTaGCTGGTTTCTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRSSSP*LVSPLA
Trigger: TGCCAATGGAGAAACCAGCAAGGGTGATGAGCTGCG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGCGAGAATATCCTCTTaGATACGCATGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNARISS*IRMGLG
Trigger: CCCCAAACCCATGCGTATCAAAGAGGATATTCTCGC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCGAGAGAACACCGTATaGTTGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDRENTV*LGRSVG
Trigger: GCCCACACTCCTCCCCAACAATACGGTGTTCTCTCG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGCTTTTGCCCATCACTGGGAGACCAGCCCCTGAGTACAGAAGACCAGGGCCCATTGGTGAAGGAGAGTaGCATGTGTTCCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: WLLPITGRPAPEYRRPGPIGEGE*HVFLSC
Trigger: ACAGCTGAGGAACACATGCAACTCTCCTTCACCAAT...GGGCCCTGGTCTTCTGTACTCAGGGGCTGGTCTCCCAGTGATGGGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCGAGGGGTGGTACACTaGCGGGACTGCCGCACCACA +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRGVVH*RDCRTT
Trigger: TGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTTCCAGGACCCGTGTaGTTGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIFPGPV*LGRSVG
Trigger: GCCCACACTCCTCCCCAACAACACGGGTCCTGGAAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS TCA 90 bp GACGACCCAGTTCCTCATAAATCTCGCGCACAGCCAGGATGCGATTaGGCATGCTCTCCAACATGCTGCGGTCCATGGGGATCACAGAAT +
Preference number: 5 (lower is better)
Translates to: DDPVPHKSRAQPGCD*ACSPTCCGPWGSQN
Trigger: ATTCTGTGATCCCCATGGACCGCAGCATGTTGGAGAGCATGCTCAATCGCATCCTGGCTGTGCGCGAGATTTATGAGGAACTGGGTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TGGGTTGGTTCTGCTGGCTATAGAAACGCAGAAGACACTGCTGGTTaGAGAAATGACGGATCTGCCCACGCCAGTGGATGGTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: WVGSAGYRNAEDTAG*RNDGSAHASGWSPA
Trigger: TGCTGGAGACCATCCACTGGCGTGGGCAGATCCGTCATTTCTGCAACCAGCAGTGTCTTCTGCGTTTCTATAGCCAGCAGAACCAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TCTCCTGCTCTCAGTGGAATCTACAACCTCAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCTTCTCTTCTGTACCCGTTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SPALSGIYNLRFWRF*SPNALASLLYPFRR
Trigger: CCGCCTGAACGGGTACAGAAGAGAAGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCTGAGGTTGTAGATTCCACTGAGAGCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS CCA 90 bp TTTCTGGCAGTACAGATGCATAGGCACTGGCACGAAGATGGGCACTaGGATGGGCAGCACGATCACCTGTGGCTTCCACTCTTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: FLAVQMHRHWHEDGH*DGQHDHLWLPLFCL
Trigger: CAAACAGAAGAGTGGAAGCCACAGGTGATCGTGCTGCCCATCCCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGGCCCATCCTCGAGTaGGGGCAGTCTGGGATTCCA +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTGPILE*GQSGIP
Trigger: TGGAATCCCAGACTGCCCCAACTCGAGGATGGGCCC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGGGCCCATCCTCGAGTaGGGGCAGTCTGGGATTCCA +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCGPILE*GQSGIP
Trigger: TGGAATCCCAGACTGCCCCAACTCGAGGATGGGCCC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCCAGGTGAACAGGAATTaGCCCCAGCCCCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: PSATFIYNPRTTPPSTALQVNRN*PQPLDQ
Trigger: CTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTG...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCCCTTTGTGACACACTaGAGCGTAGGGACATGCGAG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDPFVTH*SVGTCE
Trigger: CTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVCAQVI*VPTAER
Trigger: GCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTGTACCACGCTGCCATaGCTGACCTCGTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPECTTLP*LTSCRT
Trigger: GGTCCTGCACGAGGTCAGCAATGGCAGCGTGGTACA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CACCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCCCAAGCAGGTTGTGTaGCAGAACCGCTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: HLLVRPQAGCVAEPLLLAPKQVV*QNRFCW
Trigger: CCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG...GGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCTCTGGGTATCCAGGTaGGGTTGGTTCTGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLWVSR*GWFCWL
Trigger: TAGCCAGCAGAACCAACCCAACCTGGATACCCAGAG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATGTCTTCACAGGGATCTaGCCCAAATTCCCATTTTCC +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNVFTGI*PKFPFS
Trigger: GGAAAATGGGAATTTGGGCAAGATCCCTGTGAAGAC...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGACTTCATCTCCACCTaGCAGGAGACGCCCCGATTC +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVDFIST*QETPRF
Trigger: GAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGTC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCAGGTCAGATGAGGCCTaGTCTAACTCCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGRSDEA*SNSSAS
Trigger: AGAGGCTGAGGAGTTAGACAAGGCCTCATCTGACCT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATTCATATCGTTCACCATaGGGCCGAGTGATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNSYRSP*GRVISL
Trigger: GAGAGAAATCACTCGGCCCAATGGTGAACGATATGA...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCGAGAGAACACCGTATaGTTGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRENTV*LGRSVG
Trigger: GCCCACACTCCTCCCCAACAATACGGTGTTCTCTCG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCGAGTAGACCCCCAGTaGCTTACACTCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRVDPQ*LTLPEV
Trigger: CACCTCTGGGAGTGTAAGCAACTGGGGGTCTACTCG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCGAGTAGACCCCCAGTaGCTTACACTCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRVDPQ*LTLPEV
Trigger: CACCTCTGGGAGTGTAAGCAACTGGGGGTCTACTCG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGACTGCCGCACCACATaGGTGAAGGAGAGTTGCATG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDDCRTT*VKESCM
Trigger: CATGCAACTCTCCTTCACCAATGTGGTGCGGCAGTC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGCAGGACCGTTCAGGTaGCAGGTAGAACACATCGTT +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGAGPFR*QVEHIV
Trigger: AACGATGTGTTCTACCTGCAACCTGAACGGTCCTGC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCTCCTCGCCTGTCCTTaGACCACAGATCCCATCCTG +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTLLACP*TTDPIL
Trigger: CAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PSATFIYNPRTTPPSTALATTES*VFQISC
Trigger: GCAGGAGATCTGGAACACCAAGGACTCGGTTGTGGC...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACACTCGGCCCCACCTTCTaGTACGCCCCCAAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTLGPTF*YAPKQV
Trigger: AACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAG...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAAGAGGAGCTATTTCTCCCAGCCCTaGACCCATCAGCCACCTTTA +
Preference number: 5 (lower is better)
Translates to: PKQVVLQNRFCWPSWKRSYFSQP*THQPPL
Trigger: TAAAGGTGGCTGATGGGTCAAGGGCTGGGAGAAATA...GCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS GCA 90 bp TGGAATGCTCTCAGTGGAATCTACAACCTCAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCTTCTCTTCCGTTCAGGCGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: WNALSGIYNLRFWRF*SPNALASLPFRRLL
Trigger: GAGAAGCCGCCTGAACGGAAGAGAAGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCTGAGGTTGTAGATTCCACTGAGAGCATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TCGCTGCAGAAGCTTTTCTCCACTCCGCTGAATCGGAGTTTCTCATaGAAGAGTTTCTCCTGCCGACAGTGCTCACACTGGGACACCACA +
Preference number: 5 (lower is better)
Translates to: SLQKLFSTPLNRSFS*KSFSCRQCSHWDTT
Trigger: TGTGGTGTCCCAGTGTGAGCACTGTCGGCAGGAGAAACTCTTGCATGAGAAACTCCGATTCAGCGGAGTGGAGAAAAGCTTCTGCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp TGGAATGCTCTCAGTGGAATCTACAACCTCAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCTTCTCTTCTGTACCCGTTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: WNALSGIYNLRFWRF*SPNALASLLYPFRR
Trigger: CCGCCTGAACGGGTACAGAAGAGAAGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCTGAGGTTGTAGATTCCACTGAGAGCATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
CDS CCA 90 bp ACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTTGGCCCGGAATTTaGAGAAGCAAGAATCGCTGCAGAGCCGGTGTACCACGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: TGHNSWFSVPCWPGI*RSKNRCRAGVPRCH
Trigger: ATGGCAGCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGGGCCCATCCTCGAGTaGGGGCAGTCTGGGATTCCA +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSGPILE*GQSGIP
Trigger: TGGAATCCCAGACTGCCCCAACTCGAGGATGGGCCC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTTGTTGGCCCTCGTGGAACACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VRPQAGCVAEPLLLALVEHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...TTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCCCAAGCAGGTTGTGTaGCAGAACCGCTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDPKQVV*QNRFCW
Trigger: CCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTACGCCCCCAAGCAGGTaGTGTTGCAGAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTTPPSR*CCRTAF
Trigger: AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGCAGAACTGGAACACTaGGTCCTGCCAGTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIAELEH*VLPVQD
Trigger: GTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTGC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTTPRSR*KSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTGGCACCGGGCAGCCTaGCAGTACCACAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSWHRAA*QYHSRY
Trigger: GTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCCA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCGGTATCCAGGTTGGGTaGGTTCTGCTGGCTATAGAA +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGGIQVG*VLLAIE
Trigger: TTCTATAGCCAGCAGAACCAACCCAACCTGGATACC...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCTCTGGGTATCCAGGTaGGGTTGGTTCTGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTILWVSR*GWFCWL
Trigger: TAGCCAGCAGAACCAACCCAACCTGGATACCCAGAG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGGACTTCATCTCCACCTaGCAGGAGACGCCCCGATTC +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEDFIST*QETPRF
Trigger: GAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGTC...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATGGTCTCTACAATCTaGTCTGTGCTCTCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNMVSTI*SVLSKV
Trigger: TACCTTGGAGAGCACAGACAAGATTGTAGAGACCAT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTCGGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCCGA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAGGTCAGATGAGGCCTaGTCTAACTCCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDRSDEA*SNSSAS
Trigger: AGAGGCTGAGGAGTTAGACAAGGCCTCATCTGACCT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGGCTCATCCAAGACATaGGCCATCTTGACTGCCATG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDGSSKT*AILTAM
Trigger: CATGGCAGTCAAGATGGCCAATGTCTTGGATGAGCC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGGTTCGGGGAAGGTCTaGTTCAGTAGACACATCCTC +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDGSGKV*FSRHIL
Trigger: GAGGATGTGTCTACTGAACAAGACCTTCCCCGAACC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCTCCATTGGCATATTTaGACTGCACCCAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGLHWHI*TAPSTS
Trigger: GGAAGTGCTGGGTGCAGTCAAAATATGCCAATGGAG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCGCAGCTCATCACCCTaGCTGGTTTCTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRSSSP*LVSPLA
Trigger: TGCCAATGGAGAAACCAGCAAGGGTGATGAGCTGCG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCGAGAGAACACCGTATaGTTGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERENTV*LGRSVG
Trigger: GCCCACACTCCTCCCCAACAATACGGTGTTCTCTCG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAAGAACATGAGGGTGTaGAGGAGGACAAAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDKNMRV*RRTKGE
Trigger: CTCGCCCTTTGTCCTCCTCAACACCCTCATGTTCTT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGCAGGACCGTTCAGGTaGCAGGTAGAACACATCGTT +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDAGPFR*QVEHIV
Trigger: AACGATGTGTTCTACCTGCAACCTGAACGGTCCTGC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCGGCAGCACCAAGGATaGGTGCTTGCCGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDRQHQG*VLAEGV
Trigger: CACCCCCTCGGCAAGCACCAATCCTTGGTGCTGCCG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTAGGGGGCTAAGCATGTaGACACCATGGCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIRGLSM*TPWLMA
Trigger: TGCCATGAGCCATGGTGTCAACATGCTTAGCCCCCT...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGGGGGCTAAGCATGTaGACACCATGGCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRGLSM*TPWLMA
Trigger: TGCCATGAGCCATGGTGTCAACATGCTTAGCCCCCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAAGGTAGTTTTTGCCTaGGGAGGTCTGTCCATTGAA +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNKVVFA*GGLSIE
Trigger: TTCAATGGACAGACCTCCCAAGGCAAAAACTACCTT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS GCA 90 bp GCAGTAGCTATGGAGGTGGTCTCCTCCTCTTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCTGGAGCCAAAGGCTCTAGTAGCCCC +
Preference number: 5 (lower is better)
Translates to: AVAMEVVSSSSICGD*SVIGESGAKGSSSP
Trigger: GGGGCTACTAGAGCCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCCCCACATATTGAAGAGGAGGAGACCACCTCCATAGCTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp GCTTCCACTCTTCTGTTTGACTTCCTTTGGACTTCATCTCCACCTTaGAGGAGACGCCCCGATTCTGCATCAGTGGCTTACACATGGCAG +
Preference number: 5 (lower is better)
Translates to: ASTLLFDFLWTSSPP*RRRPDSASVAYTWQ
Trigger: CTGCCATGTGTAAGCCACTGATGCAGAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 90 bp GGATTAATGTCCAGAGGATTCTTAGGGAAGTCTGCCTCCAAGTCTTaGCCAGGCTCATCCAAGACATTGGCCATCTTGACTGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: GLMSRGFLGKSASKS*PGSSKTLAILTAMA
Trigger: GGCCATGGCAGTCAAGATGGCCAATGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGACTTCCCTAAGAATCCTCTGGACATTAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTGGTTTTCAGTCCCTaGTTGGCCCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLVFSP*LARNLE
Trigger: CTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTAEPLL*ALVEEE
Trigger: CTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQAEPLL*ALVEEE
Trigger: CTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCTTAGTGAAGTCCTGTTaGTACAGCAGCACACAGCCT +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGLVKSC*YSSTQP
Trigger: AGGCTGTGTGCTGCTGTACAAACAGGACTTCACTAA...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAGGTCAGATGAGGCCTaGTCTAACTCCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVRSDEA*SNSSAS
Trigger: AGAGGCTGAGGAGTTAGACAAGGCCTCATCTGACCT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGG +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVPSALW*LTRSQR
Trigger: CCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAAGACATTGGCCATCTaGACTGCCATGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTKTLAI*TAMART
Trigger: TGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCTT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGGCTCATCCAAGACATaGGCCATCTTGACTGCCATG +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIGSSKT*AILTAM
Trigger: CATGGCAGTCAAGATGGCCAATGTCTTGGATGAGCC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAAGCACCAGCCGCTTTaGACCCTTCCTCATGGTTCG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEKHQPL*TLPHGS
Trigger: CGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCTT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGACCAGGGCCCCATGGTaGTCAAGTGGTACGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPETRAPW*SSGTEE
Trigger: TTCTTCCGTACCACTTGACAACCATGGGGCCCTGGT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGGGGGCTAAGCATGTaGACACCATGGCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERGLSM*TPWLMA
Trigger: TGCCATGAGCCATGGTGTCAACATGCTTAGCCCCCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATGCGAGAATATCCTCTTaGATACGCATGGGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDARISS*IRMGLA
Trigger: GGCCAAACCCATGCGTATCAAAGAGGATATTCTCGC...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS TCA 90 bp GGAGCTCCCTGTATTATCTATGGAGTTTTCCTCCCTCACCAGGGCTaGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GAPCIIYGVFLPHQG*SLSLSLSLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAGCCCTGGTGAGGGAGGAAAACTCCATAGATAATACAGGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373998.5
CDS CCA 90 bp GGGGCCGGAATGGCACAAAGTCCTCATCATTGGGGTCATCTACCATaGCATCAGAATCCTCATCTGACACTGGAATGCTCTCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: GAGMAQSPHHWGHLP*HQNPHLTLECSQWN
Trigger: ATTCCACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCATTCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCAGGTGAACAGGAATTaGCCCCAGCCCCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSQVNRN*PQPLDQ
Trigger: CTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTTTGTGACACACTaGAGCGTAGGGACATGCGAG +
Preference number: 5 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQPFVTH*SVGTCE
Trigger: CTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQATTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTATTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCATTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCCCTCTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: PSATFIYNPRTTPPSTALLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAA...GAGGGCTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGTTTTCAGTCCCTTGTaGGCCCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAAC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTGGTTTTCAGTCCCTaGTTGGCCCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLVFSP*LARNLE
Trigger: CTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQVAEPL*LALVEE
Trigger: CTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCVAEPL*LALVEE
Trigger: CTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCCAAGCAGGTTGTGTaGCAGAACCGCTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPKQVV*QNRFCW
Trigger: CCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAACGCCCCCAAGCAGGTaGTGTTGCAGAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTTPPSR*CCRTAF
Trigger: AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGT...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTCGTGTGTTTTTCTTCTaGTACGCCCCCAAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRVFFF*YAPKQV
Trigger: AACCTGCTTGGGGGCGTACAAGAAGAAAAACACACG...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTTTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATCAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGCAGAACTGGAACACTaGGTCCTGCCAGTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCAELEH*VLPVQD
Trigger: GTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTGC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCGGTATCCAGGTTGGGTaGGTTCTGCTGGCTATAGAA +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVGIQVG*VLLAIE
Trigger: TTCTATAGCCAGCAGAACCAACCCAACCTGGATACC...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIVLHFG*RGCLGF
Trigger: AAACCCCAGACACCCTCTCAAACCAAAGTGGAGAAC...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTTACACATGGCAGCCTaGTTTTTGCGGGGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTLHMAA*FLRGVA
Trigger: AGCAACACCCCGCAAAAACAAGGCTGCCATGTGTAA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTCGGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSSASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCCGA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEPSALW*LTRSQR
Trigger: CCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAAGACATTGGCCATCTaGACTGCCATGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEKTLAI*TAMART
Trigger: TGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCTT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAAGCACCAGCCGCTTTaGACCCTTCCTCATGGTTCG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCKHQPL*TLPHGS
Trigger: CGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCTT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGAGAACACCGTATTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSENTVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAATACGGTGTTCTC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCGAGTAGACCCCCAGTaGCTTACACTCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRVDPQ*LTLPEV
Trigger: CACCTCTGGGAGTGTAAGCAACTGGGGGTCTACTCG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGACTGCCGCACCACATaGGTGAAGGAGAGTTGCATG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCDCRTT*VKESCM
Trigger: CATGCAACTCTCCTTCACCAATGTGGTGCGGCAGTC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGTAACCGTTACTGCTaGATGACCCCCAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTSNRYC*MTPKPG
Trigger: ACCTGGTTTGGGGGTCATCAAGCAGTAACGGTTACT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS GCA 90 bp ACTCGGCGATGCAGGACCGTTCAGGTTGCAGGTAGAACACATCGTTaGGAGTCCGGAGGCTTTCAGGACATTTTGAGAGATAGAATTCAT +
Preference number: 5 (lower is better)
Translates to: TRRCRTVQVAGRTHR*ESGGFQDILRDRIH
Trigger: ATGAATTCTATCTCTCAAAATGTCCTGAAAGCCTCCGGACTCGCAACGATGTGTTCTACCTGCAACCTGAACGGTCCTGCATCGCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 90 bp TCCCGGTCTTGGTGTAGATGTAAGCCCCACACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGGCCCGGAATTTGGAGAAGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: SRSWCRCKPHTGHNS*FSVPCWPGIWRSKN
Trigger: ATTCTTGCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTGGGGCTTACATCTACACCAAGACCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCAGGTGAACAGGAATTaGCCCCAGCCCCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDQVNRN*PQPLDQ
Trigger: CTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDCAQVI*VPTAER
Trigger: GCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSATTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPELLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTIHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDAEPLL*ALVEEE
Trigger: CTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSVAEPL*LALVEE
Trigger: CTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCCAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAGGGTGTCTGGGGTTTaGACTCAGGAGACTGACTGT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCRVSGV*TQETDC
Trigger: ACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCCT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTGTCTTCACAGGGATCTaGCCCAAATTCCCATTTTCC +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTVFTGI*PKFPFS
Trigger: GGAAAATGGGAATTTGGGCAAGATCCCTGTGAAGAC...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR CAA 90 bp CAACAGCTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCTTCCACTCTTCTGTTaGACTTCCTTTGGACTTCAT +
Preference number: 5 (lower is better)
Translates to: QQLLTTTQGWAWLTEGTGLPLFC*TSFGLH
Trigger: ATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAAG...GCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCPSALW*LTRSQR
Trigger: CCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAAGCACCAGCCGCTTTaGACCCTTCCTCATGGTTCG +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSKHQPL*TLPHGS
Trigger: CGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCTT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTGCTGGTTTCTCCATaGGCATATTTTGACTGCACC +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDLLVSP*AYFDCT
Trigger: GGTGCAGTCAAAATATGCCAATGGAGAAACCAGCAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACACAAGGGTGGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATAGACTTGTTGAGTTCTaGAACAAAAGTCAGGTAGTA +
Preference number: 5 (lower is better)
Translates to: TQGWAWLTEGTGQAPQNNRLVEF*NKSQVV
Trigger: TACTACCTGACTTTTGTTCAAGAACTCAACAAGTCT...ATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCCACCCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATAAGTGGGTACCCCCTTaGCCAGAAGCTAATTGTTTT +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDKWVPP*PEANCF
Trigger: AAAACAATTAGCTTCTGGCAAAGGGGGTACCCACTT...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTCGCATGGGTTTGGCCTaGCTGGTTTCTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSRMGLA*LVSPLA
Trigger: TGCCAATGGAGAAACCAGCAAGGCCAAACCCATGCG...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373984.7
CDS-3UTR CAA 90 bp TGGGCCTGTCACCCTGAGGGACATGGCCACAGGACAGACATTGATGTGAAAGATTTCACAGGGATTGTGTaGCTGTTCTCCACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: WACHPEGHGHRTDIDVKDFTGIV*LFSTLV
Trigger: AACCAAAGTGGAGAACAGCAACACAATCCCTGTGAA...ATCTTTCACATCAATGTCTGTCCTGTGGCCATGTCCCTCAGGGTGACAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGGGCCCATCCTCGAGTaGGGGCAGTCTGGGATTCCA +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYGPILE*GQSGIP
Trigger: TGGAATCCCAGACTGCCCCAACTCGAGGATGGGCCC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCCCTTTGTGACACACTaGAGCGTAGGGACATGCGAG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDPFVTH*SVGTCE
Trigger: CTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTTTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGTTTTCAGTCCCTTGTaGGCCCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAAC...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGTTTTCAGTCCCTTGTaGGCCCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAAC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACACGCCCCCAAGCAGGTaGTGTTGCAGAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDTPPSR*CCRTAF
Trigger: AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACTTGTGCGCTGGAACTaGGTCCAGCAGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLVRWN*VQQLGL
Trigger: CAGCCCCAGCTGCTGGACCAAGTTCCAGCGCACAAG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTACCACAGCAGGTACTaGCTCTTACAGTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCYHSRY*LLQSSL
Trigger: CAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATGGCACCGGGCAGCCTaGCAGTACCACAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQWHRAA*QYHSRY
Trigger: GTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCCA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCVLHFG*RGCLGF
Trigger: AAACCCCAGACACCCTCTCAAACCAAAGTGGAGAAC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTTACACATGGCAGCCTaGTTTTTGCGGGGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLHMAA*FLRGVA
Trigger: AGCAACACCCCGCAAAAACAAGGCTGCCATGTGTAA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTAAGACATTGGCCATCTaGACTGCCATGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSKTLAI*TAMART
Trigger: TGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCTT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCTTGCTGGTTTCTCCATaGGCATATTTTGACTGCACC +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVLLVSP*AYFDCT
Trigger: GGTGCAGTCAAAATATGCCAATGGAGAAACCAGCAA...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGCGAGAATATCCTCTTaGATACGCATGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCARISS*IRMGLG
Trigger: CCCCAAACCCATGCGTATCAAAGAGGATATTCTCGC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGTCATATCGTTCACCATaGGGCCGAGTGATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPESYRSP*GRVISL
Trigger: GAGAGAAATCACTCGGCCCAATGGTGAACGATATGA...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAAGGTAGTTTTTGCCTaGGGAGGTCTGTCCATTGAA +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVKVVFA*GGLSIE
Trigger: TTCAATGGACAGACCTCCCAAGGCAAAAACTACCTT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAAGGTAGTTTTTGCCTaGGGAGGTCTGTCCATTGAA +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTKVVFA*GGLSIE
Trigger: TTCAATGGACAGACCTCCCAAGGCAAAAACTACCTT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCTAGCTCTTATGATAGGGGAACAATAGAGGGGAACCCAGCCTCAACCCAAGTCAAGTGGGTACCCCCTTaGCCAGAAGCTAATTGTTTT +
Preference number: 5 (lower is better)
Translates to: PSSYDRGTIEGNPASTQVKWVPP*PEANCF
Trigger: AAAACAATTAGCTTCTGGCAAAGGGGGTACCCACTT...GACTTGGGTTGAGGCTGGGTTCCCCTCTATTGTTCCCCTATCATAAGAGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTGGGTCTTCACAGGGATaGTGTTGCTGTTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCGSSQG*CCCSPL
Trigger: AAGTGGAGAACAGCAACACAATCCCTGTGAAGACCC...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACTGTACCACGCTGCCATaGCTGACCTCGTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYCTTLP*LTSCRT
Trigger: GGTCCTGCACGAGGTCAGCAATGGCAGCGTGGTACA...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTGTACCACGCTGCCATaGCTGACCTCGTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYCTTLP*LTSCRT
Trigger: GGTCCTGCACGAGGTCAGCAATGGCAGCGTGGTACA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACAGCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LTHQPPLFITQEPHPLPQHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...CTGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCCCAAGCAGGTTGTGTaGCAGAACCGCTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDPKQVV*QNRFCW
Trigger: CCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGGACAGGCCAGGCGCCTCAGAACAATATATACAATTCTTCCACTCTTCTGTTaGACTTCCTTTGGACTTCAT +
Preference number: 5 (lower is better)
Translates to: GHGSLKGQARRLRTIYTILPLFC*TSFGLH
Trigger: ATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAAG...AATTGTATATATTGTTCTGAGGCGCCTGGCCTGTCCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGGTTCGGGGAAGGTCTaGTTCAGTAGACACATCCTC +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDGSGKV*FSRHIL
Trigger: GAGGATGTGTCTACTGAACAAGACCTTCCCCGAACC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTCATATCGTTCACCATaGGGCCGAGTGATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCSYRSP*GRVISL
Trigger: GAGAGAAATCACTCGGCCCAATGGTGAACGATATGA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAAGAACATGAGGGTGTaGAGGAGGACAAAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDKNMRV*RRTKGE
Trigger: CTCGCCCTTTGTCCTCCTCAACACCCTCATGTTCTT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTATTGGTGAAGGAGAGTaGCATGTGTTCCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCIGEGE*HVFLSC
Trigger: ACAGCTGAGGAACACATGCAACTCTCCTTCACCAAT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAAGTGGGTACCCCCTTaGCCAGAAGCTAATTGTTTT +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPEKWVPP*PEANCF
Trigger: AAAACAATTAGCTTCTGGCAAAGGGGGTACCCACTT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACCAGGTGAACAGGAATTaGCCCCAGCCCCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYQVNRN*PQPLDQ
Trigger: CTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTG...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACTGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYCAQVI*VPTAER
Trigger: GCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACA...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CTTGACCCATCAGCCACCTTTATTTATAACCCAAGAACCACACCCCCTTCCACATTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LDPSATFIYNPRTTPPSTFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...TGTGGAAGGGGGTGTGGTTCTTGGGTTATAAATAAAGGTGGCTGATGGGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTTGTACCACGCTGCCATaGCTGACCTCGTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: NITDTIETPFICFISPSPCTTLP*LTSCRT
Trigger: GGTCCTGCACGAGGTCAGCAATGGCAGCGTGGTACA...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACGTTTTCAGTCCCTTGTaGGCCCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAAC...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQAEPLL*ALVEEE
Trigger: CTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCAGAACCGCTTTTGTaGGCCCTCGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYAEPLL*ALVEEE
Trigger: CTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTTAGTGAAGTCCTGTTaGTACAGCAGCACACAGCCT +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSLVKSC*YSSTQP
Trigger: AGGCTGTGTGCTGCTGTACAAACAGGACTTCACTAA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTACCACAGCAGGTACTaGCTCTTACAGTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDYHSRY*LLQSSL
Trigger: CAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGACTTCATCTCCACCTaGCAGGAGACGCCCCGATTC +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYDFIST*QETPRF
Trigger: GAATCGGGGCGTCTCCTGCAAGGTGGAGATGAAGTC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTATGGTCTCTACAATCTaGTCTGTGCTCTCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCMVSTI*SVLSKV
Trigger: TACCTTGGAGAGCACAGACAAGATTGTAGAGACCAT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACCTCCATTGGCATATTTaGACTGCACCCAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDLHWHI*TAPSTS
Trigger: GGAAGTGCTGGGTGCAGTCAAAATATGCCAATGGAG...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTTTGCTGGTTTCTCCATaGGCATATTTTGACTGCACC +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLLVSP*AYFDCT
Trigger: GGTGCAGTCAAAATATGCCAATGGAGAAACCAGCAA...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGAGAACACCGTATTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQENTVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAATACGGTGTTCTC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTATTGGTGAAGGAGAGTaGCATGTGTTCCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSIGEGE*HVFLSC
Trigger: ACAGCTGAGGAACACATGCAACTCTCCTTCACCAAT...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTAAGTGGGTACCCCCTTaGCCAGAAGCTAATTGTTTT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCKWVPP*PEANCF
Trigger: AAAACAATTAGCTTCTGGCAAAGGGGGTACCCACTT...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACAGTAACCGTTACTGCTaGATGACCCCCAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDSNRYC*MTPKPG
Trigger: ACCTGGTTTGGGGGTCATCAAGCAGTAACGGTTACT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATCAGGTGAACAGGAATTaGCCCCAGCCCCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNQVNRN*PQPLDQ
Trigger: CTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTG...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCCCTTTGTGACACACTaGAGCGTAGGGACATGCGAG +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYPFVTH*SVGTCE
Trigger: CTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTTGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: NITDTIETPFICFISPSPCAQVI*VPTAER
Trigger: GCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACA...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYVAEPL*LALVEE
Trigger: CTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYVAEPL*LALVEE
Trigger: CTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAAC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACGCCCCCAAGCAGGTaGTGTTGCAGAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTPPSR*CCRTAF
Trigger: AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATACGCCCCCAAGCAGGTaGTGTTGCAGAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYTPPSR*CCRTAF
Trigger: AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTPRSR*KSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACTCTGGGTATCCAGGTaGGGTTGGTTCTGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLWVSR*GWFCWL
Trigger: TAGCCAGCAGAACCAACCCAACCTGGATACCCAGAG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCTCTGGGTATCCAGGTaGGGTTGGTTCTGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLWVSR*GWFCWL
Trigger: TAGCCAGCAGAACCAACCCAACCTGGATACCCAGAG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CAGCAAAGTCAACAGGGAAAGAAGTGGGTACCCCCTTTGCCAGAAGCTAATTGTCTTCCACTCTTCTGTTaGACTTCCTTTGGACTTCAT +
Preference number: 5 (lower is better)
Translates to: QQSQQGKKWVPPLPEANCLPLFC*TSFGLH
Trigger: ATGAAGTCCAAAGGAAGTCAAACAGAAGAGTGGAAG...ACAATTAGCTTCTGGCAAAGGGGGTACCCACTTCTTTCCCTGTTGACTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ATTGTTTTCTGGGACCTCCAATGCAAGATGGGGAAGAGAGAAGATGTAGGCAGTTTGCTGGTTTCTCCATaGGCATATTTTGACTGCACC +
Preference number: 5 (lower is better)
Translates to: IVFWDLQCKMGKREDVGSLLVSP*AYFDCT
Trigger: GGTGCAGTCAAAATATGCCAATGGAGAAACCAGCAA...ACTGCCTACATCTTCTCTCTTCCCCATCTTGCATTGGAGGTCCCAGAAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACGCAGCTCATCACCCTaGCTGGTTTCTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRSSSP*LVSPLA
Trigger: TGCCAATGGAGAAACCAGCAAGGGTGATGAGCTGCG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp ACCAGAGCTATTAACACTCCACCCAGAGTCTGGACCCAGAAGGAGGGGTTTACTAGACTTGTTGAGTTCTaGAACAAAAGTCAGGTAGTA +
Preference number: 5 (lower is better)
Translates to: TRAINTPPRVWTQKEGFTRLVEF*NKSQVV
Trigger: TACTACCTGACTTTTGTTCAAGAACTCAACAAGTCT...AGTAAACCCCTCCTTCTGGGTCCAGACTCTGGGTGGAGTGTTAATAGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATACCAGGGCCCCATGGTaGTCAAGTGGTACGGAAGAA +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYTRAPW*SSGTEE
Trigger: TTCTTCCGTACCACTTGACAACCATGGGGCCCTGGT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGGGGGCTAAGCATGTaGACACCATGGCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRGLSM*TPWLMA
Trigger: TGCCATGAGCCATGGTGTCAACATGCTTAGCCCCCT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS GCA 90 bp TACGATCCACATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTTaGACCAGACACATGGGTACACACGTGTGTTTTTCTTCTTGTACG +
Preference number: 5 (lower is better)
Translates to: YDPHVIASQSSYTGS*TRHMGTHVCFSSCT
Trigger: CGTACAAGAAGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATGTGGATCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAAGGTACAGGTCTTTTaGCCCGAGGGCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYKVQVF*PEGFLE
Trigger: CTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTT...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAAGGTACAGGTCTTTTaGCCCGAGGGCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYKVQVF*PEGFLE
Trigger: CTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACTTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACCCCAAGCAGGTTGTGTaGCAGAACCGCTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYPKQVV*QNRFCW
Trigger: CCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTACGCCCCCAAGCAGGTaGTGTTGCAGAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: NITDTIETPFICFISPSPTPPSR*CCRTAF
Trigger: AAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAAGGGTGTCTGGGGTTTaGACTCAGGAGACTGACTGT +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQRVSGV*TQETDC
Trigger: ACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCCT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGGGTGTCTGGGGTTTaGACTCAGGAGACTGACTGT +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRVSGV*TQETDC
Trigger: ACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCCT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AGGCCAGGCGCCTCAGAACAATATATACAATTTAAACAGTGGCTAACTGGTGACATGGTCTCTACAATCTaGTCTGTGCTCTCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: RPGASEQYIQFKQWLTGDMVSTI*SVLSKV
Trigger: TACCTTGGAGAGCACAGACAAGATTGTAGAGACCAT...GTCACCAGTTAGCCACTGTTTAAATTGTATATATTGTTCTGAGGCGCCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAACCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGG +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQPSALW*LTRSQR
Trigger: CCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGG...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGGTTCGGGGAAGGTCTaGTTCAGTAGACACATCCTC +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQGSGKV*FSRHIL
Trigger: GAGGATGTGTCTACTGAACAAGACCTTCCCCGAACC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp TCAGGAAACCCAAAGCCAACAGGATCACCAGAGCTATTAACACTCCACCCAGAGAGACTTGTTGAGTTCTaGAACAAAAGTCAGGTAGTA +
Preference number: 5 (lower is better)
Translates to: SGNPKPTGSPELLTLHPERLVEF*NKSQVV
Trigger: TACTACCTGACTTTTGTTCAAGAACTCAACAAGTCT...CTCTGGGTGGAGTGTTAATAGCTCTGGTGATCCTGTTGGCTTTGGGTTTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATGCAGGACCGTTCAGGTaGCAGGTAGAACACATCGTT +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYAGPFR*QVEHIV
Trigger: AACGATGTGTTCTACCTGCAACCTGAACGGTCCTGC...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAACAGCCAGGATGCGATaGAGCATGCTCTCCAACATG +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQTARMR*SMLSNM
Trigger: CATGTTGGAGAGCATGCTCAATCGCATCCTGGCTGT...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTAAGGTACAGGTCTTTTaGCCCGAGGGCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: NITDTIETPFICFISPSPKVQVF*PEGFLE
Trigger: CTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTGGTTTTCAGTCCCTaGTTGGCCCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYLVFSP*LARNLE
Trigger: CTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACTTGGTTTTCAGTCCCTaGTTGGCCCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYLVFSP*LARNLE
Trigger: CTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAA...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTCCCAAGCAGGTTGTGTaGCAGAACCGCTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: NITDTIETPFICFISPSPPKQVV*QNRFCW
Trigger: CCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGG...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCGTGTGTTTTTCTTCTaGTACGCCCCCAAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRVFFF*YAPKQV
Trigger: AACCTGCTTGGGGGCGTACAAGAAGAAAAACACACG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATTTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQVLHFG*RGCLGF
Trigger: AAACCCCAGACACCCTCTCAAACCAAAGTGGAGAAC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACTATTTCTCCCAGCCCTaGACCCATCAGCCACCTTTA +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYYFSQP*THQPPL
Trigger: TAAAGGTGGCTGATGGGTCAAGGGCTGGGAGAAATA...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AACAAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: NKDLCIHQPASKIKHNGYTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...GTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATGTTTTCAGTCCCTTGTaGGCCCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAAC...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AAAGACCTGTGTATCCACCAGCCAGCTTCAAAAATAAAACATAACGGATACAATTTGGTTTTCAGTCCCTaGTTGGCCCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: KDLCIHQPASKIKHNGYNLVFSP*LARNLE
Trigger: CTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAA...ATTGTATCCGTTATGTTTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATCAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAATTAGTGAAGTCCTGTTaGTACAGCAGCACACAGCCT +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQLVKSC*YSSTQP
Trigger: AGGCTGTGTGCTGCTGTACAAACAGGACTTCACTAA...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS-3UTR CAA 90 bp AACAAACAATTTCAGAGACAGAAGGTTAGTCGTGACAACAGCTTCTCACTACAAGTCTTCACAGGGATCTaGCCCAAATTCCCATTTTCC +
Preference number: 5 (lower is better)
Translates to: NKQFQRQKVSRDNSFSLQVFTGI*PKFPFS
Trigger: GGAAAATGGGAATTTGGGCAAGATCCCTGTGAAGAC...TTGTAGTGAGAAGCTGTTGTCACGACTAACCTTCTGTCTCTGAAATTGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
CDS-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTTATTTCTCCCAGCCCTaGACCCATCAGCCACCTTTA +
Preference number: 5 (lower is better)
Translates to: NITDTIETPFICFISPSPYFSQP*THQPPL
Trigger: TAAAGGTGGCTGATGGGTCAAGGGCTGGGAGAAATA...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp AACATAACGGATACAATTGAAACCCCCTTTATTTGTTTTATTTCTCCCAGCCCTACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: NITDTIETPFICFISPSPTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...AGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCCGTTATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373981.5
ENST00000373982.5
CDS-3UTR CAA 90 bp CCAACAACCAATTATTTCATAGGAGGGGAAGAGTGTCTAAGCTCTGTGTTTTATAGACTTGTTGAGTTCTaGAACAAAAGTCAGGTAGTA +
Preference number: 5 (lower is better)
Translates to: PTTNYFIGGEECLSSVFYRLVEF*NKSQVV
Trigger: TACTACCTGACTTTTGTTCAAGAACTCAACAAGTCT...ATAAAACACAGAGCTTAGACACTCTTCCCCTCCTATGAAATAATTGGTTGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS CCA 72 bp ATGCTGCAGCGAGTAGCGTCGGCGGGATCCCCAGACTaGGGGATCGGGCGCTGCTGCTGGGCCTCATACAGG +
Preference number: 6 (lower is better)
Translates to: MLQRVASAGSPD*GIGRCCWASYR
Trigger: CCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGCCGACGCTACTCGCTGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp TGCCCACTGCAGAGCGCCCGGCCCTTTGTGACACACTaGAGCGTAGGGACATGCGAGGAGAGCGCCGGGGCC +
Preference number: 6 (lower is better)
Translates to: CPLQSARPFVTH*SVGTCEESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGGCCGGGCGCTCTGCAGTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp TCGGCGGGATCCCCAGACTGGGGGATCGGGCGCTGCTaGTGGGCCTCATACAGGGAGAGACAGACGGATGTG +
Preference number: 6 (lower is better)
Translates to: SAGSPDWGIGRC*WASYRERQTDV
Trigger: CACATCCGTCTGTCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp GCGGGATCCCCAGACTGGGGGATCGGGCGCTGCTGCTaGGCCTCATACAGGGAGAGACAGACGGATGTGCAG +
Preference number: 6 (lower is better)
Translates to: AGSPDWGIGRCC*ASYRERQTDVQ
Trigger: CTGCACATCCGTCTGTCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGATCCCCCAGTCTGGGGATCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp TGCCCACGCCAGTGGATGGTCTCCAGCAGCTTCCCCTaGCGCTTACACGCATGGCACCGGGCAGCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: CPRQWMVSSSFP*RLHAWHRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCGTGTAAGCGCCAGGGGAAGCTGCTGGAGACCATCCACTGGCGTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS GCA 72 bp CTGGGGCATAGTAGCGGATGCTCACCACCTTGGTGGTaGCCCGAGGGGTGGTACACTTGCGGGACTGCCGCA +
Preference number: 6 (lower is better)
Translates to: LGHSSGCSPPWW*PEGWYTCGTAA
Trigger: TGCGGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp CTTACCTGGCTCAAGAGTCTGGCCCCCGTCACACCCTaGTCGCCCTACCTCCTGGAGCCCACTCTACCCGTG +
Preference number: 6 (lower is better)
Translates to: LTWLKSLAPVTP*SPYLLEPTLPV
Trigger: CACGGGTAGAGTGGGCTCCAGGAGGTAGGGCGAGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGGTAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS CAA 90 bp TCATCTTGGTGCCCACTGCAGAGCGCCCGGCCCTTTGTGACACACTaGAGCGTAGGGACATGCGAGGAGAGCGCCGGGGCCGGAATGGCA +
Preference number: 6 (lower is better)
Translates to: SSWCPLQSARPFVTH*SVGTCEESAGAGMA
Trigger: TGCCATTCCGGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp GCCCGGCCCTTTGTGACACACTTGAGCGTAGGGACATaGGAGGAGAGCGCCGGGGCCGGAATGGCACAAAGT +
Preference number: 6 (lower is better)
Translates to: ARPFVTHLSVGT*EESAGAGMAQS
Trigger: ACTTTGTGCCATTCCGGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp ATGTACTGGCTCAAGAGTCTGGCCCCCGTCACACCCTaGTCGCCCTACCTCCTGGAGCCCACTCTACCCGTG +
Preference number: 6 (lower is better)
Translates to: MYWLKSLAPVTP*SPYLLEPTLPV
Trigger: CACGGGTAGAGTGGGCTCCAGGAGGTAGGGCGAGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGTACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373981.5
CDS CCA 72 bp CCCCTTGGAGATCGGGCCAGCTTAGAGATGGAAGGCTaGCTGCCCTCCCTGGAGATCTGTCCACACCCCGAG +
Preference number: 6 (lower is better)
Translates to: PLGDRASLEMEG*LPSLEICPHPE
Trigger: CTCGGGGTGTGGACAGATCTCCAGGGAGGGCAGCCAGCCTTCCATCTCTAAGCTGGCCCGATCTCCAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS TCA 72 bp GCCCGAGGGCTTCTTGGAGAAAGTGGTGAGGCAGGATaGCGAGCAGAAGAGCTGAGGCAGCCCCTTGCGCTG +
Preference number: 6 (lower is better)
Translates to: ARGLLGESGEAG*RAEELRQPLAL
Trigger: CAGCGCAAGGGGCTGCCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGAAGCCCTCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp GGCAGTCTGCCCCTTCTGCAGTGGTGTCCGGCAATGTaGACAAGTCATCTTGGTGCCCACTGCAGAGCGCCC +
Preference number: 6 (lower is better)
Translates to: GSLPLLQWCPAM*TSHLGAHCRAP
Trigger: GGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGAAGGGGCAGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp TCCAGGACCCGTGTCTCGCCCTTTCCTCTGGCGGACTaGGGCATAGTAGCGGATGCTCACCACCTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: SRTRVSPFPLAD*GIVADAHHLGG
Trigger: ACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGCCAGAGGAAAGGGCGAGACACGGGTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp GGATATGTACTGCTCCCCTTACCTGGCTCAAGAGTCTaGCCCCCGTCACACCCTGCTCGCCCTACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GYVLLPLPGSRV*PPSHPARPTSW
Trigger: CCAGGAGGTAGGGCGAGCAGGGTGTGACGGGGGCCAGACTCTTGAGCCAGGTAAGGGGAGCAGTACATATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS CAA 72 bp CTCACCACCTTGGTGGTGCCCCGAGGGGTGGTACACTaGCGGGACTGCCGCACCACATTGGTGAAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LTTLVVPRGVVH*RDCRTTLVKES
Trigger: ACTCTCCTTCACCAATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCACCAAGGTGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 72 bp TGCAGAAGTCCCAGGTGCTGCCATCCAGTTGCTCGGTaGCTCCGCGCTGGCAGGTCTGGGAGCAGTAAGTAC +
Preference number: 6 (lower is better)
Translates to: CRSPRCCHPVAR*LRAGRSGSSKY
Trigger: GTACTTACTGCTCCCAGACCTGCCAGCGCGGAGTCACCGAGCAACTGGATGGCAGCACCTGGGACTTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 72 bp TTCCCCTGGCGCTTACACGCATGGCACCGGGCAGCCTaGGGATGTCAAAAGGATGGTCAGACCTGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: FPWRLHAWHRAA*GCQKDGQTCLP
Trigger: AGGGAGGCAGGTCTGACCATCCTTTTGACATCCTCAGGCTGCCCGGTGCCATGCGTGTAAGCGCCAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS GCA 72 bp GCAGTGGTGTCCGGCAATGTGCACAAGTCATCTTGGTaGCCACTGCAGAGCGCCCGGCCCTTTGTGACACAC +
Preference number: 6 (lower is better)
Translates to: AVVSGNVHKSSW*PLQSARPFVTH
Trigger: GTGTGTCACAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp CCTCAGGGCTTGTGCGCTGGAACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGACTGTGCGGTCAACCT +
Preference number: 6 (lower is better)
Translates to: PQGLCAGTWSSS*GCRTGRLCGQP
Trigger: AGGTTGACCGCACAGTCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGTTCCAGCGCACAAGCCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp GTCTGCCCCTTCTGCAGTGGTGTCCGGCAATGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGCCCGGCCCTTTGTGACACACTTGAG +
Preference number: 6 (lower is better)
Translates to: VCPFCSGVRQCAQVI*VPTAERPALCDTLE
Trigger: CTCAAGTGTGTCACAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGAAGGGGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp GGCACCGGGCAGCCTTGCAGTACCACAGCAGGTACTTaGTCTTACAGTCCTCACTGCAGAAGTCCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: GTGQPCSTTAGT*SYSPHCRSPRC
Trigger: GCACCTGGGACTTCTGCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS GCA 72 bp TTGGTGGTGCCCCGAGGGGTGGTACACTTGCGGGACTaGCGCACCACATTGGTGAAGGAGAGTTGCATGTGT +
Preference number: 6 (lower is better)
Translates to: LVVPRGVVHLRD*RTTLVKESCMC
Trigger: ACACATGCAACTCTCCTTCACCAATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCGGGGCACCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp TCTGCAGTGGTGTCCGGCAATGTGCACAAGTCATCTTaGTGCCCACTGCAGAGCGCCCGGCCCTTTGTGACA +
Preference number: 6 (lower is better)
Translates to: SAVVSGNVHKSS*CPLQSARPFVT
Trigger: TGTCACAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp GGTTGCAGAAATGACGGATCTGCCCACGCCAGTGGATaGTCTCCAGCAGCTTCCCCTGGCGCTTACACGCAT +
Preference number: 6 (lower is better)
Translates to: GCRNDGSAHASG*SPAASPGAYTH
Trigger: ATGCGTGTAAGCGCCAGGGGAAGCTGCTGGAGACCATCCACTGGCGTGGGCAGATCCGTCATTTCTGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp TTCTGCAGTGGTGTCCGGCAATGTGCACAAGTCATCTaGGTGCCCACTGCAGAGCGCCCGGCCCTTTGTGAC +
Preference number: 6 (lower is better)
Translates to: FCSGVRQCAQVI*VPTAERPALCD
Trigger: GTCACAAAGGGCCGGGCGCTCTGCAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp CAGTGCTCACACTGGGACACCACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCACGGCAGCAGAACTGG +
Preference number: 6 (lower is better)
Translates to: QCSHWDTTPRSR*KSSQQSRQQNW
Trigger: CCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTGTCCCAGTGTGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp GGTGTTGAGGAGGACAAAGGGCGAGTAGACCCCCAGTaGCTTACACTCCCAGAGGTGCTCCTCCTCCACTCG +
Preference number: 6 (lower is better)
Translates to: GVEEDKGRVDPQ*LTLPEVLLLHS
Trigger: CGAGTGGAGGAGGAGCACCTCTGGGAGTGTAAGCAACTGGGGGTCTACTCGCCCTTTGTCCTCCTCAACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp TCCTGCCGACAGTGCTCACACTGGGACACCACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCACGGCAGCAGAACTGGAACACTTGG +
Preference number: 6 (lower is better)
Translates to: SCRQCSHWDTTPRSR*KSSQQSRQQNWNTW
Trigger: CCAAGTGTTCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTGTCCCAGTGTGAGCACTGTCGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp GCTCTTACAGTCCTCACTGCAGAAGTCCCAGGTGCTGCCATCCAGTaGCTCGGTGACTCCGCGCTGGCAGGTCTGGGAGCAGTAAGTACA +
Preference number: 6 (lower is better)
Translates to: ALTVLTAEVPGAAIQ*LGDSALAGLGAVST
Trigger: TGTACTTACTGCTCCCAGACCTGCCAGCGCGGAGTCACCGAGCAACTGGATGGCAGCACCTGGGACTTCTGCAGTGAGGACTGTAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp TTTCTTCTTGTACGCCCCCAAGCAGGTTGTGTTGCAGAACCGCTTTaGTTGGCCCTCGTGGAAGAGGAGCTCAGGGCCAGGACTCCCGGT +
Preference number: 6 (lower is better)
Translates to: FLLVRPQAGCVAEPL*LALVEEELRARTPG
Trigger: ACCGGGAGTCCTGGCCCTGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp CACTGCCCTCTTTCCCGCCTCGCTCGCATGCTGACCCTCCTTACCTaGCAGTACCACAGCAGGTACTTGCTCTTACAGTCCTCACTGCAG +
Preference number: 6 (lower is better)
Translates to: HCPLSRLARMLTLLT*QYHSRYLLLQSSLQ
Trigger: CTGCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTACTGCAAGGTAAGGAGGGTCAGCATGCGAGCGAGGCGGGAAAGAGGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS TCA 72 bp AATCGCTGCAGAGCCGGTGTACCACGCTGCCATTGCTaGCCTCGTGCAGGACCTCTCCAGTCTTCTGGCATA +
Preference number: 6 (lower is better)
Translates to: NRCRAGVPRCHC*PRAGPLQSSGI
Trigger: TATGCCAGAAGACTGGAGAGGTCCTGCACGAGGTCAGCAATGGCAGCGTGGTACACCGGCTCTGCAGCGATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 72 bp AGTGCTCACACTGGGACACCACACCCCGAAGCCGCTTaGAGTCCTCACAGCAATCACGGCAGCAGAACTGGA +
Preference number: 6 (lower is better)
Translates to: SAHTGTPHPEAA*SPHSNHGSRTG
Trigger: TCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTGTCCCAGTGTGAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 72 bp GCTGCGGTCCATGGGGATCACAGAATACCAGAGAGGTaGCTCGGCGATGCAGGACCGTTCAGGTTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: AAVHGDHRIPER*LGDAGPFRLQV
Trigger: TACCTGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTCTCTGGTATTCTGTGATCCCCATGGACCGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp ATGCGTTGGGCCCTTTCTTTCCCCCGGGATAAGCCATaGTCCTCCCCTTGGAGATCGGGCCAGCTTAGAGAT +
Preference number: 6 (lower is better)
Translates to: MRWALSFPRDKP*SSPWRSGQLRD
Trigger: ATCTCTAAGCTGGCCCGATCTCCAAGGGGAGGAGCATGGCTTATCCCGGGGGAAAGAAAGGGCCCAACGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS CCA 72 bp GTACAGATGCATAGGCACTGGCACGAAGATGGGCACTaGGATGGGCAGCACGATCACCTGTGGCTTCCACTC +
Preference number: 6 (lower is better)
Translates to: VQMHRHWHEDGH*DGQHDHLWLPL
Trigger: GAGTGGAAGCCACAGGTGATCGTGCTGCCCATCCCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp CTTTCTTTCCCCCGGGATAAGCCATGCTCCTCCCCTTaGAGATCGGGCCAGCTTAGAGATGGAAGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LSFPRDKPCSSP*RSGQLRDGRLA
Trigger: AGCCAGCCTTCCATCTCTAAGCTGGCCCGATCTCCAAGGGGAGGAGCATGGCTTATCCCGGGGGAAAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS CAA 72 bp TGGCACCGGGCAGCCTTGCAGTACCACAGCAGGTACTaGCTCTTACAGTCCTCACTGCAGAAGTCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: WHRAALQYHSRY*LLQSSLQKSQV
Trigger: CACCTGGGACTTCTGCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTACTGCAAGGCTGCCCGGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
CDS CAA 72 bp CGAGGGGTGGTACACTTGCGGGACTGCCGCACCACATaGGTGAAGGAGAGTTGCATGTGTTCCTCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: RGVVHLRDCRTT*VKESCMCSSAV
Trigger: GACAGCTGAGGAACACATGCAACTCTCCTTCACCAATGTGGTGCGGCAGTCCCGCAAGTGTACCACCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp TCTGCCTCCAAGTCTTGCCCAGGCTCATCCAAGACATTGGCCATCTaGACTGCCATGGCCAGGACATCATCTCGAGCAGGCCCAAACAGG +
Preference number: 6 (lower is better)
Translates to: SASKSCPGSSKTLAI*TAMARTSSRAGPNR
Trigger: CCTGTTTGGGCCTGCTCGAGATGATGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp ATGGCTCTGGCTCAGTGGCAACGCCTGTGCAGTAACCGTTACTGCTaGATGACCCCCAAACCAGGTCCTGCAAAGCTACCCCCTACTCTC +
Preference number: 6 (lower is better)
Translates to: MALAQWQRLCSNRYC*MTPKPGPAKLPPTL
Trigger: GAGAGTAGGGGGTAGCTTTGCAGGACCTGGTTTGGGGGTCATCAAGCAGTAACGGTTACTGCACAGGCGTTGCCACTGAGCCAGAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS TCA 72 bp AGTCTTGCCCAGGCTCATCCAAGACATTGGCCATCTTaGCTGCCATGGCCAGGACATCATCTCGAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: SLAQAHPRHWPS*LPWPGHHLEQA
Trigger: GGCCTGCTCGAGATGATGTCCTGGCCATGGCAGTCAAGATGGCCAATGTCTTGGATGAGCCTGGGCAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp GTGCAGAACTCATGGAAGGAGCCTCCAGAACCAGTCTaGGCCACAACCGAGTCCTTGGTGTTCCAGATCTCC +
Preference number: 6 (lower is better)
Translates to: VQNSWKEPPEPV*ATTESLVFQIS
Trigger: GGAGATCTGGAACACCAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGGCTCCTTCCATGAGTTCTGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp CGCTTGAAGTCCTCACAGCAATCACGGCAGCAGAACTaGAACACTTGGTCCTGCCAGTCCAAGACCTCAGGC +
Preference number: 6 (lower is better)
Translates to: RLKSSQQSRQQN*NTWSCQSKTSG
Trigger: GCCTGAGGTCTTGGACTGGCAGGACCAAGTGTTCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp TCAGGAGGCTCTCGGGCCCACTCTGGGTATCCAGGTTaGGTTGGTTCTGCTGGCTATAGAAACGCAGAAGAC +
Preference number: 6 (lower is better)
Translates to: SGGSRAHSGYPG*VGSAGYRNAED
Trigger: GTCTTCTGCGTTTCTATAGCCAGCAGAACCAACCCAACCTGGATACCCAGAGTGGGCCCGAGAGCCTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp GAGGCTCTCGGGCCCACTCTGGGTATCCAGGTTGGGTaGGTTCTGCTGGCTATAGAAACGCAGAAGACACTG +
Preference number: 6 (lower is better)
Translates to: EALGPTLGIQVG*VLLAIETQKTL
Trigger: CAGTGTCTTCTGCGTTTCTATAGCCAGCAGAACCAACCCAACCTGGATACCCAGAGTGGGCCCGAGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp GCTCAGTGGCAACGCCTGTGCAGTAACCGTTACTGCTaGATGACCCCCAAACCAGGTCCTGCAAAGCTACCC +
Preference number: 6 (lower is better)
Translates to: AQWQRLCSNRYC*MTPKPGPAKLP
Trigger: GGGTAGCTTTGCAGGACCTGGTTTGGGGGTCATCAAGCAGTAACGGTTACTGCACAGGCGTTGCCACTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS CAA 72 bp CTTTCCCGCCTCGCTCGCATGCTGACCCTCCTTACCTaGCAGTACCACAGCAGGTACTTGCTCTTACAGTCC +
Preference number: 6 (lower is better)
Translates to: LSRLARMLTLLT*QYHSRYLLLQS
Trigger: GGACTGTAAGAGCAAGTACCTGCTGTGGTACTGCAAGGTAAGGAGGGTCAGCATGCGAGCGAGGCGGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489332.1
CDS CAA 90 bp ATGCGAGGAGAGCGCCGGGGCCGGAATGGCACAAAGTCCTCATCATaGGGGTCATCTACCATGGCATCAGAATCCTCATCTGACACTGGA +
Preference number: 6 (lower is better)
Translates to: MRGERRGRNGTKSSS*GSSTMASESSSDTG
Trigger: TCCAGTGTCAGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGCTCTCCTCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp ACTGTTCAGGAGGCTCTCGGGCCCACTCTGGGTATCCAGGTTGGGTaGGTTCTGCTGGCTATAGAAACGCAGAAGACACTGCTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: TVQEALGPTLGIQVG*VLLAIETQKTLLVA
Trigger: TGCAACCAGCAGTGTCTTCTGCGTTTCTATAGCCAGCAGAACCAACCCAACCTGGATACCCAGAGTGGGCCCGAGAGCCTCCTGAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 72 bp CTTGGTCCTGCCAGTCCAAGACCTCAGGCTTGCCACTaGAGAGGCTGTGACAGTAGTGACAGCTCAGGTGAA +
Preference number: 6 (lower is better)
Translates to: LGPASPRPQACH*RGCDSSDSSGE
Trigger: TTCACCTGAGCTGTCACTACTGTCACAGCCTCTTCAGTGGCAAGCCTGAGGTCTTGGACTGGCAGGACCAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 72 bp GTTCCTCATAAATCTCGCGCACAGCCAGGATGCGATTaGGCATGCTCTCCAACATGCTGCGGTCCATGGGGA +
Preference number: 6 (lower is better)
Translates to: VPHKSRAQPGCD*ACSPTCCGPWG
Trigger: TCCCCATGGACCGCAGCATGTTGGAGAGCATGCTCAATCGCATCCTGGCTGTGCGCGAGATTTATGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp TGGTCCAGCAGCTGGGGCTGCAGAACTGGTAGACTGTaGGGTCAACCTTGTTGTAGTAACAGGGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: WSSSWGCRTGRL*GQPCCSNRGQR
Trigger: TCTCTGACCCCTGTTACTACAACAAGGTTGACCGCACAGTCTACCAGTTCTGCAGCCCCAGCTGCTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp AGTACCACAGCAGGTACTTGCTCTTACAGTCCTCACTaGAGAAGTCCCAGGTGCTGCCATCCAGTTGCTCGG +
Preference number: 6 (lower is better)
Translates to: STTAGTCSYSPH*RSPRCCHPVAR
Trigger: CCGAGCAACTGGATGGCAGCACCTGGGACTTCTGCAGTGAGGACTGTAAGAGCAAGTACCTGCTGTGGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp ATCGAGAAAGGCACCGGGACTTTCTGGCAGTACAGATaGATAGGCACTGGCACGAAGATGGGCACTGGGATG +
Preference number: 6 (lower is better)
Translates to: IEKGTGTFWQYR*IGTGTKMGTGM
Trigger: CATCCCAGTGCCCATCTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCCTTTCTCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp ACAGGGCAGCGGAGGGGATTCATGCGGTTCTCACGCTaGTCTAAGATAGGGGCTTCATCTTCTCTCTTCCGT +
Preference number: 6 (lower is better)
Translates to: TGQRRGFMRFSR*SKIGASSSLFR
Trigger: ACGGAAGAGAGAAGATGAAGCCCCTATCTTAGAGCAGCGTGAGAACCGCATGAATCCCCTCCGCTGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp CTGGCTCAGTGGCAACGCCTGTGCAGTAACCGTTACTaGTTGATGACCCCCAAACCAGGTCCTGCAAAGCTA +
Preference number: 6 (lower is better)
Translates to: LAQWQRLCSNRY*LMTPKPGPAKL
Trigger: TAGCTTTGCAGGACCTGGTTTGGGGGTCATCAAGCAGTAACGGTTACTGCACAGGCGTTGCCACTGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS CCA 72 bp AGCCTCCAGAACCAGTCTGCGCCACAACCGAGTCCTTaGTGTTCCAGATCTCCTTCTTGCAGAAGGTACAGG +
Preference number: 6 (lower is better)
Translates to: SLQNQSAPQPSP*CSRSPSCRRYR
Trigger: CCTGTACCTTCTGCAAGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp TCATACAGGGAGAGACAGACGGATGTGCAGAACTCATaGAAGGAGCCTCCAGAACCAGTCTGCGCCACAACC +
Preference number: 6 (lower is better)
Translates to: SYRERQTDVQNS*KEPPEPVCATT
Trigger: GGTTGTGGCGCAGACTGGTTCTGGAGGCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCTCCCTGTATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp ACCGGGATAGGCATCGAGAAAGGCACCGGGACTTTCTaGCAGTACAGATGCATAGGCACTGGCACGAAGATG +
Preference number: 6 (lower is better)
Translates to: TGIGIEKGTGTF*QYRCIGTGTKM
Trigger: CATCTTCGTGCCAGTGCCTATGCATCTGTACTGCCAGAAAGTCCCGGTGCCTTTCTCGATGCCTATCCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp TTGATCCCCAGCCACACAGGTCGGGTTAAATGGCTCTaGCTCAGTGGCAACGCCTGTGCAGTAACCGTTACT +
Preference number: 6 (lower is better)
Translates to: LIPSHTGRVKWL*LSGNACAVTVT
Trigger: AGTAACGGTTACTGCACAGGCGTTGCCACTGAGCCAGAGCCATTTAACCCGACCTGTGTGGCTGGGGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373988.5
ENST00000373998.5
CDS CAA 72 bp GAGCGCCGGGGCCGGAATGGCACAAAGTCCTCATCATaGGGGTCATCTACCATGGCATCAGAATCCTCATCT +
Preference number: 6 (lower is better)
Translates to: ERRGRNGTKSSS*GSSTMASESSS
Trigger: AGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp GAGCCTCCAGAACCAGTCTGCGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTTCTTGCAGAAGGTACAG +
Preference number: 6 (lower is better)
Translates to: EPPEPVCATTES*VFQISFLQKVQ
Trigger: CTGTACCTTCTGCAAGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp GAGCCTCCAGAACCAGTCTGCGCCACAACCGAGTCCTaGGTGTTCCAGATCTCCTGCTCTCAGTGGAATCTA +
Preference number: 6 (lower is better)
Translates to: EPPEPVCATTES*VFQISCSQWNL
Trigger: TAGATTCCACTGAGAGCAGGAGATCTGGAACACCAAGGACTCGGTTGTGGCGCAGACTGGTTCTGGAGGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373978.1
CDS CAA 90 bp CACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTGCAGAGCCGGTGTACCACGCTGCCA +
Preference number: 6 (lower is better)
Translates to: HWSQQLVFSPLLARN*EKQESLQSRCTTLP
Trigger: TGGCAGCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp TGGGGATCACAGAATACCAGAGAGGTGACTCGGCGATaGAGGACCGTTCAGGTTGCAGGTAGAACACATCGT +
Preference number: 6 (lower is better)
Translates to: WGSQNTREVTRR*RTVQVAGRTHR
Trigger: ACGATGTGTTCTACCTGCAACCTGAACGGTCCTGCATCGCCGAGTCACCTCTCTGGTATTCTGTGATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp ATTTCTGCCATAGCCAGGATGTCGGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTCAGCTCCTCAATGGTC +
Preference number: 6 (lower is better)
Translates to: ISAIARMSASKG*EGIFTFSSSMV
Trigger: GACCATTGAGGAGCTGAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCCGACATCCTGGCTATGGCAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp TTGAGCTCAGCAGCTGAGCAGGCGAGAATATCCTCTTaGATACGCATGGGTTTGGGGCCAAAGCGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: LSSAAEQARISS*IRMGLGPKRSS
Trigger: TGAGCTGCGCTTTGGCCCCAAACCCATGCGTATCAAAGAGGATATTCTCGCCTGCTCAGCTGCTGAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000470832.1
CDS CAA 90 bp AAGCACCAGCCGCTTTTGACCCTTCCTCATGGTTCGGGGAAGGTCTaGTTCAGTAGACACATCCTCAGGCCCTACCAGGCCACAATCAAA +
Preference number: 6 (lower is better)
Translates to: KHQPLLTLPHGSGKV*FSRHILRPYQATIK
Trigger: TTTGATTGTGGCCTGGTAGGGCCTGAGGATGTGTCTACTGAACAAGACCTTCCCCGAACCATGAGGAAGGGTCAAAAGCGGCTGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS TCA 72 bp CACAGCCTTCGCTGCAGAAGCTTTTCTCCACTCCGCTaGATCGGAGTTTCTCATGCAAGAGTTTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: HSLRCRSFSPLR*IGVSHARVSPA
Trigger: GGCAGGAGAAACTCTTGCATGAGAAACTCCGATTCAGCGGAGTGGAGAAAAGCTTCTGCAGCGAAGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp CTCAGTGGAATCTACAACCTCAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCTTCTCTTCCGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LSGIYNLRFWRF*SPNALASLPFR
Trigger: CCTGAACGGAAGAGAAGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCTGAGGTTGTAGATTCCACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp AGGCCCAAACAGGTCACAGTCTTCCAGGAGTCCCTCTaGACTCTGGTTGCTCACAAGATCACAAAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: RPKQVTVFQESL*TLVAHKITKVR
Trigger: TCTGACCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACTCCTGGAAGACTGTGACCTGTTTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp CTCAGTGGAATCTACAACCTCAGGTTTTGGAGGTTCTaGTCTCCTAACGCGCTCGCTTCTCTTCTGTACCCG +
Preference number: 6 (lower is better)
Translates to: LSGIYNLRFWRF*SPNALASLLYP
Trigger: CGGGTACAGAAGAGAAGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCTGAGGTTGTAGATTCCACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373978.1
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
CDS CCA 72 bp AACAGGTCACAGTCTTCCAGGAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAAAGGTCAGATGAGGCC +
Preference number: 6 (lower is better)
Translates to: NRSQSSRSPSAL*LLTRSQRSDEA
Trigger: GGCCTCATCTGACCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACTCCTGGAAGACTGTGACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp CACAGGACAGACATTGATGTGAAAGATGGATATGGATaGCACACGAGCTCAGTCCAGGTCTTCCTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: HRTDIDVKDGYG*HTSSVQVFLPR
Trigger: CCTGGGGAGGAAGACCTGGACTGAGCTCGTGTGCCATCCATATCCATCTTTCACATCAATGTCTGTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp CAACAGTTGGTTTTCAGTCCCTTGTTGGCCCGGAATTaGGAGAAGCAAGAATCGCTGCAGAGCCGGTGTACC +
Preference number: 6 (lower is better)
Translates to: QQLVFSPLLARN*EKQESLQSRCT
Trigger: GGTACACCGGCTCTGCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp GCCCCACACTGGTCACAACAGTTGGTTTTCAGTCCCTaGTTGGCCCGGAATTTGGAGAAGCAAGAATCGCTG +
Preference number: 6 (lower is better)
Translates to: APHWSQQLVFSP*LARNLEKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp TGTTCTCCACTTTGGTTTGAGAGGGTGTCTGGGGTTTaGACTCAGGAGACTGACTGTTCAGGAGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: CSPLWFERVSGV*TQETDCSGGSR
Trigger: CCGAGAGCCTCCTGAACAGTCAGTCTCCTGAGTCAAAACCCCAGACACCCTCTCAAACCAAAGTGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp AGGTCACAGTCTTCCAGGAGTCCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGGTCAGATGAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: RSQSSRSPSALW*LTRSQRSDEAL
Trigger: CAAGGCCTCATCTGACCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACTCCTGGAAGACTGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp TCCTTGGTGTTCCAGATCTCCTTCTTGCAGAAGGTACAGGTCTTTTaGCCCGAGGGCTTCTTGGAGAAAGTGGTGAGGCAGGATGACGAG +
Preference number: 6 (lower is better)
Translates to: SLVFQISFLQKVQVF*PEGFLEKVVRQDDE
Trigger: CTCGTCATCCTGCCTCACCACTTTCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAACACCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp GGGATTAATGTCCAGAGGATTCTTAGGGAAGTCTGCCTCCAAGTCTaGCCCAGGCTCATCCAAGACATTGGCCATCTTGACTGCCATGGC +
Preference number: 6 (lower is better)
Translates to: GINVQRILREVCLQV*PRLIQDIGHLDCHG
Trigger: GCCATGGCAGTCAAGATGGCCAATGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGACTTCCCTAAGAATCCTCTGGACATTAATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp TTGGAAGGGATCTTCACCTTCAGCTCCTCAATGGTCTCTACAATCTaGTCTGTGCTCTCCAAGGTAGTGGGCAAGAACATGGGCACAGGC +
Preference number: 6 (lower is better)
Translates to: LEGIFTFSSSMVSTI*SVLSKVVGKNMGTG
Trigger: GCCTGTGCCCATGTTCTTGCCCACTACCTTGGAGAGCACAGACAAGATTGTAGAGACCATTGAGGAGCTGAAGGTGAAGATCCCTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp TCTTTGATACGCATGGGTTTGGGGCCAAAGCGCAGCTCATCACCCTaGCTGGTTTCTCCATTGGCATATTTTGACTGCACCCAGCACTTC +
Preference number: 6 (lower is better)
Translates to: SLIRMGLGPKRSSSP*LVSPLAYFDCTQHF
Trigger: GAAGTGCTGGGTGCAGTCAAAATATGCCAATGGAGAAACCAGCAAGGGTGATGAGCTGCGCTTTGGCCCCAAACCCATGCGTATCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373988.5
ENST00000373998.5
ENST00000470832.1
CDS TCA 72 bp ATGGGTCAAATGGACTGGGGAAATCACTGGGGTCCATaGGTATGGCTGGATATGTACTGCGGCAGGGTTAGT +
Preference number: 6 (lower is better)
Translates to: MGQMDWGNHWGP*VWLDMYCGRVS
Trigger: ACTAACCCTGCCGCAGTACATATCCAGCCATACTCATGGACCCCAGTGATTTCCCCAGTCCATTTGACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373982.5
ENST00000373984.7
ENST00000489332.1
CDS GCA 72 bp AAGCTTTTCTCCACTCCGCTGAATCGGAGTTTCTCATaGAAGAGTTTCTCCTGCCGACAGTGCTCACACTGG +
Preference number: 6 (lower is better)
Translates to: KLFSTPLNRSFS*KSFSCRQCSHW
Trigger: CCAGTGTGAGCACTGTCGGCAGGAGAAACTCTTGCATGAGAAACTCCGATTCAGCGGAGTGGAGAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp CCAAATTCCCATTTTCCTCTGGGGTCCTCACTGTGTTaGTGTTCTCCACTTTGGTTTGAGAGGGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PNSHFPLGSSLC*CSPLWFERVSG
Trigger: CCCAGACACCCTCTCAAACCAAAGTGGAGAACAGCAACACAGTGAGGACCCCAGAGGAAAATGGGAATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000489332.1
CDS GCA 72 bp TCCAGAGGATTCTTAGGGAAGTCTGCCTCCAAGTCTTaGCCAGGCTCATCCAAGACATTGGCCATCTTGACT +
Preference number: 6 (lower is better)
Translates to: SRGFLGKSASKS*PGSSKTLAILT
Trigger: AGTCAAGATGGCCAATGTCTTGGATGAGCCTGGGCAAGACTTGGAGGCAGACTTCCCTAAGAATCCTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp TGCAGGACCGTTCAGGTTGCAGGTAGAACACATCGTTaGGAGTCCGGAGGCTTTCAGGACATTTTGAGAGAT +
Preference number: 6 (lower is better)
Translates to: CRTVQVAGRTHR*ESGGFQDILRD
Trigger: ATCTCTCAAAATGTCCTGAAAGCCTCCGGACTCGCAACGATGTGTTCTACCTGCAACCTGAACGGTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp GGGTCTTCACAGGGATTGTGTTGCTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGGGTTTTGACTCAGGAG +
Preference number: 6 (lower is better)
Translates to: GSSQGLCCCSPL*FERVSGVLTQE
Trigger: CTCCTGAGTCAAAACCCCAGACACCCTCTCAAACCAAAGTGGAGAACAGCAACACAATCCCTGTGAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373998.5
CDS CAA 72 bp TTCCAGATCTCCTTCTTGCAGAAGGTACAGGTCTTTTaGCCCGAGGGCTTCTTGGAGAAAGTGGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: FQISFLQKVQVF*PEGFLEKVVRQ
Trigger: CTGCCTCACCACTTTCTCCAAGAAGCCCTCGGGCAAAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp CCACACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTaGGCCCGGAATTTGGAGAAGCAAGAATCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: PHWSQQLVFSPL*ARNLEKQESLQ
Trigger: CTGCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp TTGAGCTCAGCAGCTGAGCAGGCGAGAATATCCTCTTaGATACGCATGGGTTTGGCCTTGCTGGTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSSAAEQARISS*IRMGLALLVSP
Trigger: TGGAGAAACCAGCAAGGCCAAACCCATGCGTATCAAAGAGGATATTCTCGCCTGCTCAGCTGCTGAGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373984.7
ENST00000489332.1
CDS TCA 72 bp ATGGGTCAAATGGACTGGGGAAATCACTGGGGTCCATaGGTATGGCTGGATATGTACTGGCTCAAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: MGQMDWGNHWGP*VWLDMYWLKSL
Trigger: CAGACTCTTGAGCCAGTACATATCCAGCCATACTCATGGACCCCAGTGATTTCCCCAGTCCATTTGACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373978.1
ENST00000373981.5
CDS GCA 72 bp ATGGAGGTGGTCTCCTCCTCTTCAATATGTGGGGACTaGAGTGTTATTGGAGAATCTGGAGCCAAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: MEVVSSSSICGD*SVIGESGAKGS
Trigger: AGAGCCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCCCCACATATTGAAGAGGAGGAGACCACCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp CACACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTTaGCCCGGAATTTGGAGAAGCAAGAATCGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: HTGHNSWFSVPC*PGIWRSKNRCR
Trigger: TCTGCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp TGGTGTAGATGTAAGCCCCACACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGGCCCGGAATTTGGAGA +
Preference number: 6 (lower is better)
Translates to: WCRCKPHTGHNS*FSVPCWPGIWR
Trigger: TCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTGGGGCTTACATCTACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp CTTCACAGGGATCTTGCCCAAATTCCCATTTTCCTCTaGGGTCCTCACTGTGTTGCTGTTCTCCACTTTGGT +
Preference number: 6 (lower is better)
Translates to: LHRDLAQIPIFL*GPHCVAVLHFG
Trigger: ACCAAAGTGGAGAACAGCAACACAGTGAGGACCCCAGAGGAAAATGGGAATTTGGGCAAGATCCCTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000489332.1
CDS CAA 72 bp ATACAGCACAAGCCCAGCTTCTTAGTGAAGTCCTGTTaGTACAGCAGCACACAGCCTTCGCTGCAGAAGCTT +
Preference number: 6 (lower is better)
Translates to: IQHKPSFLVKSC*YSSTQPSLQKL
Trigger: AAGCTTCTGCAGCGAAGGCTGTGTGCTGCTGTACAAACAGGACTTCACTAAGAAGCTGGGCTTGTGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp AGTAGCTATGGAGGTGGTCTCCTCCTCTTCAATATGTaGGGACTGCAGTGTTATTGGAGAATCTGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: SSYGGGLLLFNM*GLQCYWRIWSQ
Trigger: TTGGCTCCAGATTCTCCAATAACACTGCAGTCCCCACATATTGAAGAGGAGGAGACCACCTCCATAGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314425.9
ENST00000373978.1
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp CTCAAAGTTCTTACACAGGGTCTTGCACCAGACACATaGGTACACACGTGTGTTTTTCTTCTTGTACGCCCC +
Preference number: 6 (lower is better)
Translates to: LKVLTQGLAPDT*VHTCVFLLVRP
Trigger: GGGGCGTACAAGAAGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CCA 72 bp ATGGCACAAAGTCCTCATCATTGGGGTCATCTACCATaGCATCAGAATCCTCATCTGACACTGGAATGCTCT +
Preference number: 6 (lower is better)
Translates to: MAQSPHHWGHLP*HQNPHLTLECS
Trigger: AGAGCATTCCAGTGTCAGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314425.9
ENST00000373981.5
ENST00000373982.5
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp GAAGTGGTACAGCACAGGGAACAGAACAAGCTGGTCTaGCCATTACGATCCACATGTGATAGCATCTCAAAG +
Preference number: 6 (lower is better)
Translates to: EVVQHREQNKLV*PLRSTCDSISK
Trigger: CTTTGAGATGCTATCACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCCTGTGCTGTACCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp ATCTTCACCTTCAGCTCCTCAATGGTCTCTACAATCTaGTCTGTGCTCTCCAAGGTAGTGGGCAAGAACATG +
Preference number: 6 (lower is better)
Translates to: IFTFSSSMVSTI*SVLSKVVGKNM
Trigger: CATGTTCTTGCCCACTACCTTGGAGAGCACAGACAAGATTGTAGAGACCATTGAGGAGCTGAAGGTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp AAGTGGTACAGCACAGGGAACAGAACAAGCTGGTCTTaGCATTACGATCCACATGTGATAGCATCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: KWYSTGNRTSWS*HYDPHVIASQS
Trigger: ACTTTGAGATGCTATCACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCCTGTGCTGTACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS GCA 72 bp CATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTTaGACCAGACACATGGGTACACACGTGTGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: HVIASQSSYTGS*TRHMGTHVCFS
Trigger: AGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 72 bp ACATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTaGCACCAGACACATGGGTACACACGTGTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: TCDSISKFLHRV*HQTHGYTRVFF
Trigger: GAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1
CDS CAA 90 bp TTACGATCCACATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTaGCACCAGACACATGGGTACACACGTGTGTTTTTCTTCTTGTAC +
Preference number: 6 (lower is better)
Translates to: LRSTCDSISKFLHRV*HQTHGYTRVFFFLY
Trigger: GTACAAGAAGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATGTGGATCGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314425.9
ENST00000373984.7
ENST00000373988.5
ENST00000373998.5
ENST00000489332.1