RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMYM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197056

Ensembl transcript IDs: ENST00000359858.9, ENST00000373329.5, ENST00000373330.1, ENST00000417119.5, ENST00000463393.1, ENST00000488455.5, ENST00000611874.4, ENST00000650449.1

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGACATGGGACAATCTCAAAAATATGTTACACAGAGAAGACAAGCTaGAGAACAGTATACACCGTACAATACCACTTAGGAAAAATACCT +
Preference number: 1 (lower is better)
Translates to: RHGTISKICYTEKTS*RTVYTVQYHLGKIP
Trigger: AGGTATTTTTCCTAAGTGGTATTGTACGGTGTATACTGTTCTTCAGCTTGTCTTCTCTGTGTAACATATTTTTGAGATTGTCCCATGTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
3UTR-3UTR GCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAATGTCAGCAGGGACTaGTCAAATATATTATGGTAC +
Preference number: 2 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTNVSRD*SNILWY
Trigger: GTACCATAATATATTTGAGCAGTCCCTGCTGACATT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
3UTR-3UTR CCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTCTTCATGTAACGACATaGGACAATCTCAAAAATATG +
Preference number: 2 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGLHVTT*DNLKNM
Trigger: CATATTTTTGAGATTGTCCCATGTCGTTACATGAAG...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGGCACGAGAATCGCTTaGACCTGGGAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQGTRIA*TWEVEV
Trigger: GACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGCC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGTTTCCAGATTCCCTTaGAGTCGTCGCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTVSRFP*SRRWLA
Trigger: TGCCAGCCAGCGACGACTTCAAGGGAATCTGGAAAC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGCAGTGAATGGACATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQAVNGH*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCTCAATGTCCATTCACTGC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGTGAGACTGTGTCCTTaGAGTCGTCGCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRVRLCP*SRRWLA
Trigger: TGCCAGCCAGCGACGACTTCAAGGACACAGTCTCAC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACTGCTGTCTGCAAGCTaGAGACCCAGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQLLSAS*RPRETS
Trigger: ACTGGTTTCCCTGGGTCTCCAGCTTGCAGACAGCAG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCACCCGCCCAACGCTTCTaGAACAATCTTCGAAGCGAA +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAPAQRF*NNLRSE
Trigger: TTCGCTTCGAAGATTGTTTCAGAAGCGTTGGGCGGG...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359858.9
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGATGCCAGAGAAAGCTaGATGCCTGCAGTCAACTGT +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGDARES*MPAVNC
Trigger: ACAGTTGACTGCAGGCATTCAGCTTTCTCTGGCATC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACCAGCACAGGAAACCTaGATAGCTGTGGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQPAQET*IAVVET
Trigger: AGTTTCAACCACAGCTATTCAGGTTTCCTGTGCTGG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGACTGTCCTTCCATCTaGAGTATGTGGGACAGACTA +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQDCPSI*SMWDRL
Trigger: TAGTCTGTCCCACATACTTCAGATGGAAGGACAGTC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGACTGTCCTTCCATCTaGAGTATGTGGGACAGACTA +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGDCPSI*SMWDRL
Trigger: TAGTCTGTCCCACATACTTCAGATGGAAGGACAGTC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTCCGTGGGTTGCAAATaGCTCTCTTCCACAGCTAAA +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTSVGCK*LSSTAK
Trigger: TTTAGCTGTGGAAGAGAGTCATTTGCAACCCACGGA...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATTGAGTCTAAAGGTCTaGGAAGCAGGGGAGCTGATG +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRLSLKV*EAGELM
Trigger: CATCAGCTCCCCTGCTTCTCAGACCTTTAGACTCAA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR GCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACAGTCTTCTGGCACATaGTGCACTTGGTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQQSSGT*CTWSKC
Trigger: GCATTTTGACCAAGTGCAGCATGTGCCAGAAGACTG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR GCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAGAAGTCCCACAATCTaGTGTCTGCAAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRRSPTI*CLQAGD
Trigger: GTCTCCAGCTTGCAGACAGCAGATTGTGGGACTTCT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR CCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTCTCATGCATTGTGGGTaGGACTGTAAACTGGCACAA +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGLMHCG*DCKLAQ
Trigger: TTGTGCCAGTTTACAGTCCCACCCACAATGCATGAG...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACTCATGCATTGTGGGTaGGACTGTAAACTGGCACAA +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQLMHCG*DCKLAQ
Trigger: TTGTGCCAGTTTACAGTCCCACCCACAATGCATGAG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTTCAGTTCATTCTCCTaGGTTCTGGACTGTTGCCTA +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTFSSFS*VLDCCL
Trigger: TAGGCAACAGTCCAGAACTCAGGAGAATGAACTGAA...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCACCAGCACAGGAAACCTaGATAGCTGTGGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAPAQET*IAVVET
Trigger: AGTTTCAACCACAGCTATTCAGGTTTCCTGTGCTGG...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGACCAGCACAGGAAACCTaGATAGCTGTGGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRPAQET*IAVVET
Trigger: AGTTTCAACCACAGCTATTCAGGTTTCCTGTGCTGG...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTAGCAGAGTGAAACTTTaGAAGGCAGGCATTACTGCA +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGSRVKL*KAGITA
Trigger: TGCAGTAATGCCTGCCTTTCAAAGTTTCACTCTGCT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAGCAGAGTGAAACTTTaGAAGGCAGGCATTACTGCA +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTSRVKL*KAGITA
Trigger: TGCAGTAATGCCTGCCTTTCAAAGTTTCACTCTGCT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCACTGGGTTCACTAGGTaGACTCTTAGAAAGATCCAC +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTTGFTR*TLRKIH
Trigger: GTGGATCTTTCTAAGAGTTCACCTAGTGAACCCAGT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAACTGGGTTCACTAGGTaGACTCTTAGAAAGATCCAC +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQTGFTR*TLRKIH
Trigger: GTGGATCTTTCTAAGAGTTCACCTAGTGAACCCAGT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATCCGTGGGTTGCAAATaGCTCTCTTCCACAGCTAAA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRSVGCK*LSSTAK
Trigger: TTTAGCTGTGGAAGAGAGTCATTTGCAACCCACGGA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACTTAGGGTTAAATGGTaGGGATTAAGTGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQLRVKW*GLSGMV
Trigger: CACCATCCCACTTAATCCTCACCATTTAACCCTAAG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR GCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGACAGTCTTCTGGCACATaGTGCACTTGGTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRQSSGT*CTWSKC
Trigger: GCATTTTGACCAAGTGCAGCATGTGCCAGAAGACTG...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGGTGGGACTGTAAACTaGCACAATCCTTATAGATGG +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTGGTVN*HNPYRW
Trigger: CCATCTATAAGGATTGTGCCAGTTTACAGTCCCACC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCATTCAGTTCATTCTCCTaGGTTCTGGACTGTTGCCTA +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAFSSFS*VLDCCL
Trigger: TAGGCAACAGTCCAGAACTCAGGAGAATGAACTGAA...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATTCAGTTCATTCTCCTaGGTTCTGGACTGTTGCCTA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRFSSFS*VLDCCL
Trigger: TAGGCAACAGTCCAGAACTCAGGAGAATGAACTGAA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAATTTATTCACGCCAGATaGTGCCAGAGAAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQFIHAR*CQRKLN
Trigger: ATTCAGCTTTCTCTGGCATCATCTGGCGTGAATAAA...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAGCAGAGTGAAACTTTaGAAGGCAGGCATTACTGCA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRSRVKL*KAGITA
Trigger: TGCAGTAATGCCTGCCTTTCAAAGTTTCACTCTGCT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAGAAAGAAGCTCTGTTaGAGTATCATGCACCACAGA +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTRKKLC*SIMHHR
Trigger: TCTGTGGTGCATGATACTTCAACAGAGCTTCTTTCT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAAGAAAGAAGCTCTGTTaGAGTATCATGCACCACAGA +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQRKKLC*SIMHHR
Trigger: TCTGTGGTGCATGATACTTCAACAGAGCTTCTTTCT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAACTGGGTTCACTAGGTaGACTCTTAGAAAGATCCAC +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNATGFTR*TLRKIH
Trigger: GTGGATCTTTCTAAGAGTTCACCTAGTGAACCCAGT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAACTGGGTTCACTAGGTaGACTCTTAGAAAGATCCAC +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRTGFTR*TLRKIH
Trigger: GTGGATCTTTCTAAGAGTTCACCTAGTGAACCCAGT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAACCAATGTCAGCAAATaGCTCAATTCATCGGCGAAA +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQTNVSK*LNSSAK
Trigger: TTTCGCCGATGAATTGAGTCATTTGCTGACATTGGT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAACAAACAGCCGAGACTaGCGAAGTTTATGCAACTAT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQTNSRD*RSLCNY
Trigger: ATAGTTGCATAAACTTCGTCAGTCTCGGCTGTTTGT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGTTCTCAGTACTTGCTaGAGTAATTGGCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGVLSTC*SNWPRQ
Trigger: TTGTCTTGGCCAATTACTTCAGCAAGTACTGAGAAC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGTTCTCAGTACTTGCTaGAGTAATTGGCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTVLSTC*SNWPRQ
Trigger: TTGTCTTGGCCAATTACTTCAGCAAGTACTGAGAAC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGTTCTCAGTACTTGCTaGAGTAATTGGCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQVLSTC*SNWPRQ
Trigger: TTGTCTTGGCCAATTACTTCAGCAAGTACTGAGAAC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAGTCAACTTCCTGTCTTaGAAACTGCAAAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAVNFLS*KLQREA
Trigger: AGCCTCTCTTTGCAGTTTTCAAGACAGGAAGTTGAC...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS-3UTR GCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTTCTTCTGGCACATGCTaGACTTGGTCAAAATGCTAT +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGSSGTC*TWSKCY
Trigger: ATAGCATTTTGACCAAGTGCAGCATGTGCCAGAAGA...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTTTATTTACCAACTCCTaGTCAACAGCCATTAGGGCT +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGLFTNS*STAIRA
Trigger: AGCCCTAATGGCTGTTGAGCAGGAGTTGGTAAATAA...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCATCCTGTCTTGAAAACTaGAAAGAGAGGCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNASCLEN*KERLET
Trigger: AGTCTCCAGCCTCTCTTTGCAGTTTTCAAGACAGGA...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS-3UTR CCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGTAGTGTCTTCCAGCTaGACACTAATCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGVVSSS*TLITSF
Trigger: AAAGGATGTGATTAGTGTCCAGCTGGAAGACACTAC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGTAGTGTCTTCCAGCTaGACACTAATCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTVVSSS*TLITSF
Trigger: AAAGGATGTGATTAGTGTCCAGCTGGAAGACACTAC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGTAGTGTCTTCCAGCTaGACACTAATCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQVVSSS*TLITSF
Trigger: AAAGGATGTGATTAGTGTCCAGCTGGAAGACACTAC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGGTGGGACTGTAAACTaGCACAATCCTTATAGATGG +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRGGTVN*HNPYRW
Trigger: CCATCTATAAGGATTGTGCCAGTTTACAGTCCCACC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGAAGCTTTTTGTGGCTaGACTGGGTTTTGTAATCAG +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQEAFCG*TGFCNQ
Trigger: CTGATTACAAAACCCAGTCCAGCCACAAAAAGCTTC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS-3UTR CCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGACCACCTTTCAGGAAATaGGCACTAAAGGATGCTACA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRPPFRK*ALKDAT
Trigger: TGTAGCATCCTTTAGTGCCCATTTCCTGAAAGGTGG...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATTTATTCACGCCAGATaGTGCCAGAGAAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRFIHAR*CQRKLN
Trigger: ATTCAGCTTTCTCTGGCATCATCTGGCGTGAATAAA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCATTTATTCACGCCAGATaGTGCCAGAGAAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAFIHAR*CQRKLN
Trigger: ATTCAGCTTTCTCTGGCATCATCTGGCGTGAATAAA...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAATGAAATGTATTCAGTaGTGCATGGTATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQMKCIQ*CMVWSR
Trigger: TCTGCTCCATACCATGCATCACTGAATACATTTCAT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAGAAAGAAGCTCTGTTaGAGTATCATGCACCACAGA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRRKKLC*SIMHHR
Trigger: TCTGTGGTGCATGATACTTCAACAGAGCTTCTTTCT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAATCGGTGTCTGCCAATaGCACTATATTGCTTATAAC +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQIGVCQ*HYIAYN
Trigger: GTTATAAGCAATATAGTGTCATTGGCAGACACCGAT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGAACCAATTGCATGCTaGCTGAATACTGATGAAGAT +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTEPIAC*LNTDED
Trigger: ATCTTCATCAGTATTCAGTCAGCATGCAATTGGTTC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGAACCAATTGCATGCTaGCTGAATACTGATGAAGAT +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGEPIAC*LNTDED
Trigger: ATCTTCATCAGTATTCAGTCAGCATGCAATTGGTTC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTATGCTGAGGAGTCATTaGTCTCATTCACAATATCCT +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGMLRSH*SHSQYP
Trigger: AGGATATTGTGAATGAGATCAATGACTCCTCAGCAT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGGCGAAACTTGTATTTaGAGAATGGCTTGCTATAAC +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQGETCI*RMACYN
Trigger: GTTATAGCAAGCCATTCTTCAAATACAAGTTTCGCC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGGCGAAACTTGTATTTaGAGAATGGCTTGCTATAAC +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGGETCI*RMACYN
Trigger: GTTATAGCAAGCCATTCTTCAAATACAAGTTTCGCC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAACCAATGTCAGCAAATaGCTCAATTCATCGGCGAAA +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNATNVSK*LNSSAK
Trigger: TTTCGCCGATGAATTGAGTCATTTGCTGACATTGGT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAACCAATGTCAGCAAATaGCTCAATTCATCGGCGAAA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRTNVSK*LNSSAK
Trigger: TTTCGCCGATGAATTGAGTCATTTGCTGACATTGGT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAACAAACAGCCGAGACTaGCGAAGTTTATGCAACTAT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNATNSRD*RSLCNY
Trigger: ATAGTTGCATAAACTTCGTCAGTCTCGGCTGTTTGT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAACAAACAGCCGAGACTaGCGAAGTTTATGCAACTAT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRTNSRD*RSLCNY
Trigger: ATAGTTGCATAAACTTCGTCAGTCTCGGCTGTTTGT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAGTTCTCAGTACTTGCTaGAGTAATTGGCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAVLSTC*SNWPRQ
Trigger: TTGTCTTGGCCAATTACTTCAGCAAGTACTGAGAAC...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGGTTTGGCAGGTTTCTaGTTATATGCTGTAATACTC +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTGLAGF*LYAVIL
Trigger: GAGTATTACAGCATATAAGCAGAAACCTGCCAAACC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGGTTTGGCAGGTTTCTaGTTATATGCTGTAATACTC +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGGLAGF*LYAVIL
Trigger: GAGTATTACAGCATATAAGCAGAAACCTGCCAAACC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGGTTTGGCAGGTTTCTaGTTATATGCTGTAATACTC +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQGLAGF*LYAVIL
Trigger: GAGTATTACAGCATATAAGCAGAAACCTGCCAAACC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR GCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATTATTTACCAACTCCTaGTCAACAGCCATTAGGGCT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRLFTNS*STAIRA
Trigger: AGCCCTAATGGCTGTTGAGCAGGAGTTGGTAAATAA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR GCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCATTATTTACCAACTCCTaGTCAACAGCCATTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNALFTNS*STAIRA
Trigger: AGCCCTAATGGCTGTTGAGCAGGAGTTGGTAAATAA...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAATGGGCACTAAAGGATaGTACAGATTAGCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRMGTKG*YRLARC
Trigger: ACACCTAGCTAATCTGTAGCATCCTTTAGTGCCCAT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGTATTCAGTGATGCATaGTATGGAGCAGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTVFSDA*YGAEKL
Trigger: CAACTTTTCTGCTCCATACCATGCATCACTGAATAC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGTATTCAGTGATGCATaGTATGGAGCAGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGVFSDA*YGAEKL
Trigger: CAACTTTTCTGCTCCATACCATGCATCACTGAATAC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGTATTCAGTGATGCATaGTATGGAGCAGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQVFSDA*YGAEKL
Trigger: CAACTTTTCTGCTCCATACCATGCATCACTGAATAC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAAGGAACTGGTGAACTaGCAGATGAAATGTATTCAG +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTKELVN*QMKCIQ
Trigger: CTGAATACATTTCATCTGCCAGTTCACCAGTTCCTT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTAAGGAACTGGTGAACTaGCAGATGAAATGTATTCAG +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGKELVN*QMKCIQ
Trigger: CTGAATACATTTCATCTGCCAGTTCACCAGTTCCTT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAGGAACAGATATAAGTaGTTTGGCAGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTRNRYK*FGRFLL
Trigger: AAGCAGAAACCTGCCAAACCACTTATATCTGTTCCT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAAGGAACAGATATAAGTaGTTTGGCAGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQRNRYK*FGRFLL
Trigger: AAGCAGAAACCTGCCAAACCACTTATATCTGTTCCT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCCAATTAGAAGTTCCGTaGGTTGCAAATGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTQLEVP*VANDSL
Trigger: AAGAGAGTCATTTGCAACCCACGGAACTTCTAATTG...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACAATTAGAAGTTCCGTaGGTTGCAAATGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQQLEVP*VANDSL
Trigger: AAGAGAGTCATTTGCAACCCACGGAACTTCTAATTG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAATGAAATGTATTCAGTaGTGCATGGTATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAMKCIQ*CMVWSR
Trigger: TCTGCTCCATACCATGCATCACTGAATACATTTCAT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAATCGGTGTCTGCCAATaGCACTATATTGCTTATAAC +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRIGVCQ*HYIAYN
Trigger: GTTATAAGCAATATAGTGTCATTGGCAGACACCGAT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAGAACCAATTGCATGCTaGCTGAATACTGATGAAGAT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAEPIAC*LNTDED
Trigger: ATCTTCATCAGTATTCAGTCAGCATGCAATTGGTTC...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGAACCAATTGCATGCTaGCTGAATACTGATGAAGAT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHREPIAC*LNTDED
Trigger: ATCTTCATCAGTATTCAGTCAGCATGCAATTGGTTC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAATGCTGAGGAGTCATTaGTCTCATTCACAATATCCT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRMLRSH*SHSQYP
Trigger: AGGATATTGTGAATGAGATCAATGACTCCTCAGCAT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAATGCTGAGGAGTCATTaGTCTCATTCACAATATCCT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAMLRSH*SHSQYP
Trigger: AGGATATTGTGAATGAGATCAATGACTCCTCAGCAT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGGCGAAACTTGTATTTaGAGAATGGCTTGCTATAAC +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRGETCI*RMACYN
Trigger: GTTATAGCAAGCCATTCTTCAAATACAAGTTTCGCC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAATTTCCACAATTTCATTaGGTCTTTCAGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQFPQFH*VFQAPL
Trigger: TAATGGAGCCTGAAAGACTCAATGAAATTGTGGAAA...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTTTTCCACAATTTCATTaGGTCTTTCAGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGFPQFH*VFQAPL
Trigger: TAATGGAGCCTGAAAGACTCAATGAAATTGTGGAAA...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAAAGACAAGATAGGCTaGAAAAAGTTTTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTKDKIG*KKFCKR
Trigger: CCTCTTGCAAAACTTTTTGCAGCCTATCTTGTCTTT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTAAAGACAAGATAGGCTaGAAAAAGTTTTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGKDKIG*KKFCKR
Trigger: CCTCTTGCAAAACTTTTTGCAGCCTATCTTGTCTTT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAAAAGACAAGATAGGCTaGAAAAAGTTTTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQKDKIG*KKFCKR
Trigger: CCTCTTGCAAAACTTTTTGCAGCCTATCTTGTCTTT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAAGGAACAGATATAAGTaGTTTGGCAGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNARNRYK*FGRFLL
Trigger: AAGCAGAAACCTGCCAAACCACTTATATCTGTTCCT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAGGAACAGATATAAGTaGTTTGGCAGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRRNRYK*FGRFLL
Trigger: AAGCAGAAACCTGCCAAACCACTTATATCTGTTCCT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCACAATTAGAAGTTCCGTaGGTTGCAAATGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAQLEVP*VANDSL
Trigger: AAGAGAGTCATTTGCAACCCACGGAACTTCTAATTG...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGACAATTAGAAGTTCCGTaGGTTGCAAATGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRQLEVP*VANDSL
Trigger: AAGAGAGTCATTTGCAACCCACGGAACTTCTAATTG...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAAGTAATGTACGATCATaGACTGTCCAACATGATTGT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQSNVRS*TVQHDC
Trigger: ACAATCATGTTGGACAGTCCATGATCGTACATTACT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAGTAATGTACGATCATaGACTGTCCAACATGATTGT +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTSNVRS*TVQHDC
Trigger: ACAATCATGTTGGACAGTCCATGATCGTACATTACT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACCTGGATTTGAGAGATaGCTTTACTACTTATTAGCT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQPGFER*LYYLLA
Trigger: AGCTAATAAGTAGTAAAGCCATCTCTCAAATCCAGG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGTATCTTACACAAATTaGAAGCTGTTCTTTCATGGC +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRVSYTN*KLFFHG
Trigger: GCCATGAAAGAACAGCTTTCAATTTGTGTAAGATAC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAGTATCTTACACAAATTaGAAGCTGTTCTTTCATGGC +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAVSYTN*KLFFHG
Trigger: GCCATGAAAGAACAGCTTTCAATTTGTGTAAGATAC...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCATTTCCACAATTTCATTaGGTCTTTCAGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAFPQFH*VFQAPL
Trigger: TAATGGAGCCTGAAAGACTCAATGAAATTGTGGAAA...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR TCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATTTCCACAATTTCATTaGGTCTTTCAGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRFPQFH*VFQAPL
Trigger: TAATGGAGCCTGAAAGACTCAATGAAATTGTGGAAA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR GCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAAAGACAAGATAGGCTaGAAAAAGTTTTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRKDKIG*KKFCKR
Trigger: CCTCTTGCAAAACTTTTTGCAGCCTATCTTGTCTTT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR GCA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTAATGTTTCGAAAATTTaGCAACATTTCCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGNVSKI*QHFPRH
Trigger: ATGTCTGGGGAAATGTTGGCAAATTTTCGAAACATT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAATGTTTCGAAAATTTaGCAACATTTCCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTNVSKI*QHFPRH
Trigger: ATGTCTGGGGAAATGTTGGCAAATTTTCGAAACATT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAAATGTTTCGAAAATTTaGCAACATTTCCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQNVSKI*QHFPRH
Trigger: ATGTCTGGGGAAATGTTGGCAAATTTTCGAAACATT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR GCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAAATGTCAGCAGGGACTaGTCAAATATATTATGGTAC +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNANVSRD*SNILWY
Trigger: GTACCATAATATATTTGAGCAGTCCCTGCTGACATT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR GCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAATGTCAGCAGGGACTaGTCAAATATATTATGGTAC +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRNVSRD*SNILWY
Trigger: GTACCATAATATATTTGAGCAGTCCCTGCTGACATT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR GCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAATATTATTTAATATCATaGTCTCTCAGTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQYYLIS*SLSRPP
Trigger: AGGTGGCCTACTGAGAGAGCATGATATTAAATAATA...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR CCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAGTAATGTACGATCATaGACTGTCCAACATGATTGT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRSNVRS*TVQHDC
Trigger: ACAATCATGTTGGACAGTCCATGATCGTACATTACT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTGTTTCAATAATCTCTaGAAGACTGTCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTCFNNL*KTVNHR
Trigger: TCTGTGATTGACAGTCTTCCAGAGATTATTGAAACA...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGCTTCTCTTGTCCCATaGTATTACATAAATATGTCT +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTASLVP*YYINMS
Trigger: AGACATATTTATGTAATACCATGGGACAAGAGAAGC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCCTTCATGTAACGACATaGGACAATCTCAAAAATATG +
Preference number: 4 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTLHVTT*DNLKNM
Trigger: CATATTTTTGAGATTGTCCCATGTCGTTACATGAAG...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACTTCATGTAACGACATaGGACAATCTCAAAAATATG +
Preference number: 4 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQLHVTT*DNLKNM
Trigger: CATATTTTTGAGATTGTCCCATGTCGTTACATGAAG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCACCTGGATTTGAGAGATaGCTTTACTACTTATTAGCT +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNAPGFER*LYYLLA
Trigger: AGCTAATAAGTAGTAAAGCCATCTCTCAAATCCAGG...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS-3UTR CCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCATGTTTCAATAATCTCTaGAAGACTGTCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNACFNNL*KTVNHR
Trigger: TCTGTGATTGACAGTCTTCCAGAGATTATTGAAACA...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATGTTTCAATAATCTCTaGAAGACTGTCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRCFNNL*KTVNHR
Trigger: TCTGTGATTGACAGTCTTCCAGAGATTATTGAAACA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGCTTCTCTTGTCCCATaGTATTACATAAATATGTCT +
Preference number: 4 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRASLVP*YYINMS
Trigger: AGACATATTTATGTAATACCATGGGACAAGAGAAGC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CCA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCACTTCATGTAACGACATaGGACAATCTCAAAAATATG +
Preference number: 4 (lower is better)
Translates to: GTILIDGNLPISIKSKNALHVTT*DNLKNM
Trigger: CATATTTTTGAGATTGTCCCATGTCGTTACATGAAG...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS TCA 90 bp AGAAGCAGGGGAGCTGATGGTATAAATCCTCTTAGGGTTAAATGGTaGGGATTAAGTGGGATGGTGCATGTGAAGTGCTCAGCAAGCCAA +
Preference number: 5 (lower is better)
Translates to: RSRGADGINPLRVKW*GLSGMVHVKCSASQ
Trigger: TTGGCTTGCTGAGCACTTCACATGCACCATCCCACTTAATCCTCACCATTTAACCCTAAGAGGATTTATACCATCAGCTCCCCTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS CCA 90 bp GATGATATGGAGGCGAAGAAGTCCCACAATCTGCTGTCTGCAAGCTaGAGACCCAGGGAAACCAGTGGTGTAATTCAATTTGAGTCTAAA +
Preference number: 5 (lower is better)
Translates to: DDMEAKKSHNLLSAS*RPRETSGVIQFESK
Trigger: TTTAGACTCAAATTGAATTACACCACTGGTTTCCCTGGGTCTCCAGCTTGCAGACAGCAGATTGTGGGACTTCTTCGCCTCCATATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS GCA 90 bp ATTTCATTGAGTCTTTCAGGCTCCATTAGTTTATTTACCAACTCCTaGTCAACAGCCATTAGGGCTGGGCCAGTAAGCTTCTCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: ISLSLSGSISLFTNS*STAIRAGPVSFSCP
Trigger: GGGACAAGAGAAGCTTACTGGCCCAGCCCTAATGGCTGTTGAGCAGGAGTTGGTAAATAAACTAATGGAGCCTGAAAGACTCAATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359858.9
ENST00000373329.5
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACGCAGTGAATGGACATaGAGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQRSEWT*SHCTPA
Trigger: GGCTGGAGTGCAGTGGCTCAATGTCCATTCACTGCG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTAGTTTCCAGATTCCCTaGAAGTCGTCGCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGSFQIP*KSSLAG
Trigger: GCCAGCCAGCGACGACTTCAAGGGAATCTGGAAACT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAGTGAGACTGTGTCCTaGAAGTCGTCGCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRSETVS*KSSLAG
Trigger: GCCAGCCAGCGACGACTTCAAGGACACAGTCTCACT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTTGTGATGCCACTGCCTaGTCACACTCACCACCTAAA +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGCDATA*SHSPPK
Trigger: TTTAGGTGGTGAGTGTGACAAGGCAGTGGCATCACA...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTGTGATGCCACTGCCTaGTCACACTCACCACCTAAA +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTCDATA*SHSPPK
Trigger: TTTAGGTGGTGAGTGTGACAAGGCAGTGGCATCACA...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAATGTGATGCCACTGCCTaGTCACACTCACCACCTAAA +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQCDATA*SHSPPK
Trigger: TTTAGGTGGTGAGTGTGACAAGGCAGTGGCATCACA...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAATCTCTGACAGCCAAGTaGTTCACTGTGGAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQSLTAK*FTVEGA
Trigger: AGCTCCTTCCACAGTGAACAACTTGGCTGTCAGAGA...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS TCA 90 bp TATTGTCTTTTTGTACTTCTGTACTGGAACCAATTGCATGCTGACTaGATACTGATGAAGATGGTGAAACGCTTGGCTGTTCCGTACTAC +
Preference number: 5 (lower is better)
Translates to: YCLFVLLYWNQLHAD*ILMKMVKRLAVPYY
Trigger: GTAGTACGGAACAGCCAAGCGTTTCACCATCTTCATCAGTATTCAGTCAGCATGCAATTGGTTCCAGTACAGAAGTACAAAAAGACAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359858.9
ENST00000373329.5
ENST00000373330.1
ENST00000417119.5
ENST00000488455.5
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAAGATGGTGAAACGCTaGGCTGTTCCGTACTACTAC +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTKMVKR*AVPYYY
Trigger: GTAGTAGTACGGAACAGCCAAGCGTTTCACCATCTT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAAAGATGGTGAAACGCTaGGCTGTTCCGTACTACTAC +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQKMVKR*AVPYYY
Trigger: GTAGTAGTACGGAACAGCCAAGCGTTTCACCATCTT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTTCTGCAGAAGCTTTTaGTGGCTGGACTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTFCRSF*WLDWVL
Trigger: CAAAACCCAGTCCAGCCACAAAAAGCTTCTGCAGAA...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS TCA 90 bp TTCATATTGTCTTTTTGTACTTCTGTACTGGAACCAATTGCATGCTaGCTGAATACTGATGAAGATGGTGAAACGCTTGGCTGTTCCGTA +
Preference number: 5 (lower is better)
Translates to: FILSFCTSVLEPIAC*LNTDEDGETLGCSV
Trigger: TACGGAACAGCCAAGCGTTTCACCATCTTCATCAGTATTCAGTCAGCATGCAATTGGTTCCAGTACAGAAGTACAAAAAGACAATATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359858.9
ENST00000373329.5
ENST00000373330.1
ENST00000417119.5
ENST00000488455.5
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCCCTATGACAATACTCTaGAGCATTGTCGGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTPMTIL*SIVGFC
Trigger: ACAGAACCCGACAATGCTCAAGAGTATTGTCATAGG...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTCCTATGACAATACTCTaGAGCATTGTCGGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGPMTIL*SIVGFC
Trigger: ACAGAACCCGACAATGCTCAAGAGTATTGTCATAGG...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCCTGAGTTCTGGACTGTaGCCTATGACAATACTCTTG +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTLSSGL*PMTILL
Trigger: CAAGAGTATTGTCATAGGCAACAGTCCAGAACTCAG...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTAGGCTGCAAAAAGTTTaGCAAGAGGTAGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGRLQKV*QEVVSS
Trigger: GGAAGACACTACCTCTTGCAAAACTTTTTGCAGCCT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAGGCTGCAAAAAGTTTaGCAAGAGGTAGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTRLQKV*QEVVSS
Trigger: GGAAGACACTACCTCTTGCAAAACTTTTTGCAGCCT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAAGGCTGCAAAAAGTTTaGCAAGAGGTAGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQRLQKV*QEVVSS
Trigger: GGAAGACACTACCTCTTGCAAAACTTTTTGCAGCCT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGAGAAAGAAGCTCTGTaGAAGTATCATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTEKEAL*KYHAPQ
Trigger: CTGTGGTGCATGATACTTCAACAGAGCTTCTTTCTC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGAGAAAGAAGCTCTGTaGAAGTATCATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGEKEAL*KYHAPQ
Trigger: CTGTGGTGCATGATACTTCAACAGAGCTTCTTTCTC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGAGAAAGAAGCTCTGTaGAAGTATCATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQEKEAL*KYHAPQ
Trigger: CTGTGGTGCATGATACTTCAACAGAGCTTCTTTCTC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAAAGATGGTGAAACGCTaGGCTGTTCCGTACTACTAC +
Preference number: 5 (lower is better)
Translates to: GTILIDGNLPISIKSKNAKMVKR*AVPYYY
Trigger: GTAGTAGTACGGAACAGCCAAGCGTTTCACCATCTT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGACTGAGTTCTGGACTGTaGCCTATGACAATACTCTTG +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRLSSGL*PMTILL
Trigger: CAAGAGTATTGTCATAGGCAACAGTCCAGAACTCAG...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCACTGAGTTCTGGACTGTaGCCTATGACAATACTCTTG +
Preference number: 5 (lower is better)
Translates to: GTILIDGNLPISIKSKNALSSGL*PMTILL
Trigger: CAAGAGTATTGTCATAGGCAACAGTCCAGAACTCAG...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTTGGCACATGCTGCACTaGGTCAAAATGCTATTAGTA +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGWHMLH*VKMLLV
Trigger: TACTAATAGCATTTTGACCAAGTGCAGCATGTGCCA...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAATGGCACATGCTGCACTaGGTCAAAATGCTATTAGTA +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQWHMLH*VKMLLV
Trigger: TACTAATAGCATTTTGACCAAGTGCAGCATGTGCCA...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGAGGGCTTCAATGGTTaGCAAGGAACAGATATAAGT +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGEGFNG*QGTDIS
Trigger: ACTTATATCTGTTCCTTGCAAACCATTGAAGCCCTC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGAGGGCTTCAATGGTTaGCAAGGAACAGATATAAGT +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQEGFNG*QGTDIS
Trigger: ACTTATATCTGTTCCTTGCAAACCATTGAAGCCCTC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGAGAAAGAAGCTCTGTaGAAGTATCATGCACCACAG +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHREKEAL*KYHAPQ
Trigger: CTGTGGTGCATGATACTTCAACAGAGCTTCTTTCTC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCGAGTCGTATCTTTCTTaGGAGAAAGAAGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTESYLS*EKEALL
Trigger: CAACAGAGCTTCTTTCTCCAAAGAAAGATACGACTC...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTGAGTCGTATCTTTCTTaGGAGAAAGAAGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGESYLS*EKEALL
Trigger: CAACAGAGCTTCTTTCTCCAAAGAAAGATACGACTC...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGAGTCGTATCTTTCTTaGGAGAAAGAAGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQESYLS*EKEALL
Trigger: CAACAGAGCTTCTTTCTCCAAAGAAAGATACGACTC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAGAGGGCTTCAATGGTTaGCAAGGAACAGATATAAGT +
Preference number: 5 (lower is better)
Translates to: GTILIDGNLPISIKSKNAEGFNG*QGTDIS
Trigger: ACTTATATCTGTTCCTTGCAAACCATTGAAGCCCTC...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTCTTTGGATGTACATTTaGGGTGACATAGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGLWMYI*GDIVHH
Trigger: GTGATGAACTATGTCACCCAAAATGTACATCCAAAG...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCCTTTGGATGTACATTTaGGGTGACATAGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTLWMYI*GDIVHH
Trigger: GTGATGAACTATGTCACCCAAAATGTACATCCAAAG...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAACTTTGGATGTACATTTaGGGTGACATAGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQLWMYI*GDIVHH
Trigger: GTGATGAACTATGTCACCCAAAATGTACATCCAAAG...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTAATGCTGAGGAGTCATaGATCTCATTCACAATATCC +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGNAEES*ISFTIS
Trigger: GGATATTGTGAATGAGATCAATGACTCCTCAGCATT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCAATGCTGAGGAGTCATaGATCTCATTCACAATATCC +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTNAEES*ISFTIS
Trigger: GGATATTGTGAATGAGATCAATGACTCCTCAGCATT...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp GATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTATATAAAAGGTATTCATCGGCGAAACTaGTATTTGAAGAATGGCTTG +
Preference number: 5 (lower is better)
Translates to: DFQLTVNSLMCNVTYIKGIHRRN*YLKNGL
Trigger: CAAGCCATTCTTCAAATACAAGTTTCGCCGATGAAT...ACCTTTTATATAGGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAATTCATCGGCGAAACTaGTATTTGAAGAATGGCTTG +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQIHRRN*YLKNGL
Trigger: CAAGCCATTCTTCAAATACAAGTTTCGCCGATGAAT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAACAGATATAAGTGGTTaGGCAGGTTTCTGCTTATAT +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQTDISG*AGFCLY
Trigger: ATATAAGCAGAAACCTGCCAAACCACTTATATCTGT...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAAATGCTGAGGAGTCATaGATCTCATTCACAATATCC +
Preference number: 5 (lower is better)
Translates to: GTILIDGNLPISIKSKNANAEES*ISFTIS
Trigger: GGATATTGTGAATGAGATCAATGACTCCTCAGCATT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAAATGCTGAGGAGTCATaGATCTCATTCACAATATCC +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRNAEES*ISFTIS
Trigger: GGATATTGTGAATGAGATCAATGACTCCTCAGCATT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp ATTCTAACTTTAGATTTCCAGCTTACAGTAAACTCACTCATGTGCAATGTGACCTCTTTCATGGCACTATaGATTGTCTCATCACATATG +
Preference number: 5 (lower is better)
Translates to: ILTLDFQLTVNSLMCNVTSFMAL*IVSSHM
Trigger: CATATGTGATGAGACAATCAATAGTGCCATGAAAGA...GGTCACATTGCACATGAGTGAGTTTACTGTAAGCTGGAAATCTAAAGTTAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAATCTTTCATGGCACTATaGATTGTCTCATCACATATG +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQSFMAL*IVSSHM
Trigger: CATATGTGATGAGACAATCAATAGTGCCATGAAAGA...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCAATTCATCGGCGAAACTaGTATTTGAAGAATGGCTTG +
Preference number: 5 (lower is better)
Translates to: GTILIDGNLPISIKSKNAIHRRN*YLKNGL
Trigger: CAAGCCATTCTTCAAATACAAGTTTCGCCGATGAAT...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAATTCATCGGCGAAACTaGTATTTGAAGAATGGCTTG +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRIHRRN*YLKNGL
Trigger: CAAGCCATTCTTCAAATACAAGTTTCGCCGATGAAT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp TCTGCAATTATAGACCAAGAATCAAGAAACTCTTCATGTAACGACATGGGACAAGTGCTAGTAAGCGATTaGACAACTTCTATAAATCTC +
Preference number: 5 (lower is better)
Translates to: SAIIDQESRNSSCNDMGQVLVSD*TTSINL
Trigger: GAGATTTATAGAAGTTGTCAAATCGCTTACTAGCAC...TTGTCCCATGTCGTTACATGAAGAGTTTCTTGATTCTTGGTCTATAATTGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAACAGATATAAGTGGTTaGGCAGGTTTCTGCTTATAT +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRTDISG*AGFCLY
Trigger: ATATAAGCAGAAACCTGCCAAACCACTTATATCTGT...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359858.9
ENST00000373330.1
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGAGTGCTAGTAAGCGATTaGACAACTTCTATAAATCTC +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRVLVSD*TTSINL
Trigger: GAGATTTATAGAAGTTGTCAAATCGCTTACTAGCAC...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611874.4
ENST00000650449.1
CDS-3UTR CAA 90 bp GGCACAATCCTTATAGATGGCAACTTGCCAATATCTATCAAAAGTAAAAATGCATTAGATTTCCTGGATTaGAGAGATGGCTTTACTACT +
Preference number: 5 (lower is better)
Translates to: GTILIDGNLPISIKSKNALDFLD*RDGFTT
Trigger: AGTAGTAAAGCCATCTCTCAAATCCAGGAAATCTAA...TGCATTTTTACTTTTGATAGATATTGGCAAGTTGCCATCTATAAGGATTGTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611874.4
CDS-3UTR CAA 90 bp CAAGAAACTCTTCATGTAACGACATGGGACAATCTCAAAAATATGTTACACAGATTAGATTTCCTGGATTaGAGAGATGGCTTTACTACT +
Preference number: 5 (lower is better)
Translates to: QETLHVTTWDNLKNMLHRLDFLD*RDGFTT
Trigger: AGTAGTAAAGCCATCTCTCAAATCCAGGAAATCTAA...TCTGTGTAACATATTTTTGAGATTGTCCCATGTCGTTACATGAAGAGTTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611874.4
ENST00000650449.1
CDS GCA 72 bp CAGAAGATGATATGGAGGCGAAGAAGTCCCACAATCTaGTGTCTGCAAGCTGGAGACCCAGGGAAACCAGTG +
Preference number: 6 (lower is better)
Translates to: QKMIWRRRSPTI*CLQAGDPGKPV
Trigger: CACTGGTTTCCCTGGGTCTCCAGCTTGCAGACAGCAGATTGTGGGACTTCTTCGCCTCCATATCATCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS CCA 72 bp GAGGCGAAGAAGTCCCACAATCTGCTGTCTGCAAGCTaGAGACCCAGGGAAACCAGTGGTGTAATTCAATTT +
Preference number: 6 (lower is better)
Translates to: EAKKSHNLLSAS*RPRETSGVIQF
Trigger: AAATTGAATTACACCACTGGTTTCCCTGGGTCTCCAGCTTGCAGACAGCAGATTGTGGGACTTCTTCGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS CAA 90 bp GTGGCTGGACTGGGTTTTGTAATCAGAACCTCTCTGACAGCCAAGTaGTTCACTGTGGAAGGAGCTGCAAGGAAGAAGTCAACTTCCTGT +
Preference number: 6 (lower is better)
Translates to: VAGLGFVIRTSLTAK*FTVEGAARKKSTSC
Trigger: ACAGGAAGTTGACTTCTTCCTTGCAGCTCCTTCCACAGTGAACAACTTGGCTGTCAGAGAGGTTCTGATTACAAAACCCAGTCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417119.5
ENST00000611874.4
CDS CAA 72 bp CTGGGTTTTGTAATCAGAACCTCTCTGACAGCCAAGTaGTTCACTGTGGAAGGAGCTGCAAGGAAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: LGFVIRTSLTAK*FTVEGAARKKS
Trigger: TGACTTCTTCCTTGCAGCTCCTTCCACAGTGAACAACTTGGCTGTCAGAGAGGTTCTGATTACAAAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417119.5
ENST00000611874.4
CDS TCA 72 bp GGAGCTGATGGTATAAATCCTCTTAGGGTTAAATGGTaGGGATTAAGTGGGATGGTGCATGTGAAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: GADGINPLRVKW*GLSGMVHVKCS
Trigger: TGAGCACTTCACATGCACCATCCCACTTAATCCTCACCATTTAACCCTAAGAGGATTTATACCATCAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650449.1
CDS TCA 72 bp ACTACTACTAGCAACAGCATTACTGGGTTCACTAGGTaGACTCTTAGAAAGATCCACAATGACATCTGCTGT +
Preference number: 6 (lower is better)
Translates to: TTTSNSITGFTR*TLRKIHNDICC
Trigger: ACAGCAGATGTCATTGTGGATCTTTCTAAGAGTTCACCTAGTGAACCCAGTAATGCTGTTGCTAGTAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359858.9
ENST00000373329.5
ENST00000373330.1
ENST00000417119.5
ENST00000488455.5
ENST00000611874.4
ENST00000650449.1
CDS TCA 72 bp TTTGACAACTTCTATAAATCTCCATTTCTTCGACCTTaGAATGGGGATAATTGTAGTGGCTGCATCGTAGGT +
Preference number: 6 (lower is better)
Translates to: FDNFYKSPFLRP*NGDNCSGCIVG
Trigger: ACCTACGATGCAGCCACTACAATTATCCCCATTTCAAGGTCGAAGAAATGGAGATTTATAGAAGTTGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417119.5
ENST00000611874.4
ENST00000650449.1
CDS CCA 72 bp GGAAGACTGTCAATCACAGATAGTAATGTACGATCATaGACTGTCCAACATGATTGTGATATATGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: GRLSITDSNVRS*TVQHDCDICFL
Trigger: CAAGAAACATATATCACAATCATGTTGGACAGTCCATGATCGTACATTACTATCTGTGATTGACAGTCTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359858.9
ENST00000373329.5
ENST00000373330.1
ENST00000488455.5
ENST00000611874.4
ENST00000650449.1
CDS TCA 72 bp TTTGGCAGGTTTCTGCTTATATGCTGTAATACTCTTTaGACTATTAAAGTAATGAGACTGTCCTTCCATCTG +
Preference number: 6 (lower is better)
Translates to: FGRFLLICCNTL*TIKVMRLSFHL
Trigger: CAGATGGAAGGACAGTCTCATTACTTTAATAGTTCAAAGAGTATTACAGCATATAAGCAGAAACCTGCCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359858.9
ENST00000373329.5
ENST00000373330.1
ENST00000417119.5
ENST00000463393.1
ENST00000488455.5
ENST00000611874.4
ENST00000650449.1
CDS TCA 72 bp CAGCAAATGACTCAATTCATCGGCGAAACTTGTATTTaGAGAATGGCTTGCTATAACTTCCAATGTTTCAAT +
Preference number: 6 (lower is better)
Translates to: QQMTQFIGETCI*RMACYNFQCFN
Trigger: ATTGAAACATTGGAAGTTATAGCAAGCCATTCTTCAAATACAAGTTTCGCCGATGAATTGAGTCATTTGCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359858.9
ENST00000373329.5
ENST00000373330.1
ENST00000488455.5
ENST00000611874.4
ENST00000650449.1
CDS CAA 72 bp GCTTTACTACTTATTAGCTGTGTGCTAGTAAGCGATTaGACAACTTCTATAAATCTCCATTTCTTCGACCTT +
Preference number: 6 (lower is better)
Translates to: ALLLISCVLVSD*TTSINLHFFDL
Trigger: AAGGTCGAAGAAATGGAGATTTATAGAAGTTGTCAAATCGCTTACTAGCACACAGCTAATAAGTAGTAAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417119.5
ENST00000611874.4
ENST00000650449.1