RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMPSTE24 (Homo sapiens)

Ensembl gene IDs: ENSG00000084073

Ensembl transcript IDs: ENST00000372759.4, ENST00000472583.1, ENST00000479131.5, ENST00000674703.1, ENST00000675754.1, ENST00000675937.1

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTTCCCTTCTTCCTCATTGCGGGGTTCCATGCCAGAATCCTCCTaGATGTCTTTGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCA +
Preference number: 1 (lower is better)
Translates to: LFPSSSLRGSMPESS*MSLFSTEYSSSRVS
Trigger: TGACACTCTACTAGAAGAGTACTCTGTACTAAACAAAGACATCCAGGAGGATTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR CCA 90 bp CCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATAAA +
Preference number: 1 (lower is better)
Translates to: PCEDITQMSAEQKTL*SDTKGVQLIPLWNK
Trigger: TTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR TCA 90 bp CAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAATGCCCAGAAGGTAATAAGCATTATC +
Preference number: 1 (lower is better)
Translates to: QRSKRLYGQIPKAYS*SHFGINAQKVISII
Trigger: GATAATGCTTATTACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 90 bp ATCTGGCTAATAATGATATTTTTGACTGTATGTCCCAACTTCCAGTaGCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTA +
Preference number: 1 (lower is better)
Translates to: IWLIMIFLTVCPNFQ*PSSWPSTASTSSFL
Trigger: TAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACATACAGTCAAAAATATCATTATTAGCCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 90 bp CTCACAGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATaGCCTCAAACACCTCACATGCAGATTCCATATAAGTATACAAAT +
Preference number: 1 (lower is better)
Translates to: LTERIPVVMLPLSNI*PQTPHMQIPYKYTN
Trigger: ATTTGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 90 bp TTCTATCACAAAAGTATTATAAAGACTCCATGGCAAACCAGTCAATaGACTGAAAAGTGTAGCCAACAGCAGAAACACCAGGGACTGAGT +
Preference number: 1 (lower is better)
Translates to: FYHKSIIKTPWQTSQ*TEKCSQQQKHQGLS
Trigger: ACTCAGTCCCTGGTGTTTCTGCTGTTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCATGGAGTCTTTATAATACTTTTGTGATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR TCA 90 bp TATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAAAGAAAGA +
Preference number: 1 (lower is better)
Translates to: YKSLAFPSFLANASA*NSNLRLRTVRQKER
Trigger: TCTTTCTTTTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 90 bp AGACACAGGCAACAAAATACACTGAGTCACAACAAATTTCTTGATTaGATCTTTCATGAAGAACCCCAAAGTCTGTTGATTGAAGCCATG +
Preference number: 1 (lower is better)
Translates to: RHRQQNTLSHNKFLD*IFHEEPQSLLIEAM
Trigger: CATGGCTTCAATCAACAGACTTTGGGGTTCTTCATGAAAGATGCAATCAAGAAATTTGTTGTGACTCAGTGTATTTTGTTGCCTGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTAGAAACACCAGGGACTaGGTGATCTCATATTCTGGT +
Preference number: 2 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFRNTRD*VISYSG
Trigger: ACCAGAATATGAGATCACTCAGTCCCTGGTGTTTCT...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR CCA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGTGCCCCAGTTCATaGCCTAGTACAGCGAGTACC +
Preference number: 2 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMQCPSS*PSTAST
Trigger: GGTACTCGCTGTACTAGGCCATGAACTGGGGCACTG...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGCAGTGCCCCAGTTCATaGCCTAGTACAGCGAGTACC +
Preference number: 2 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLQCPSS*PSTAST
Trigger: GGTACTCGCTGTACTAGGCCATGAACTGGGGCACTG...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTCATTGCGGGGTTCCATaGCAGAATCCTCCTGGATGT +
Preference number: 2 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVHCGVP*QNPPGC
Trigger: ACATCCAGGAGGATTCTGGCATGGAACCCCGCAATG...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTTGTCCCAACTTCCAGTaGCCCAGTTCATGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVCPNFQ*PSSWPS
Trigger: ACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACA...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTATGCCAGAATCCTCCTaGATGTCTTTGTTTAGTACA +
Preference number: 2 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFMPESS*MSLFST
Trigger: TGTACTAAACAAAGACATCCAGGAGGATTCTGGCAT...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp TTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTGAAACTCAAATCTGCGTGTCCCAACTTCCAGTaGCCCAGTTCATGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: FSLPKFLGKCISLKLKSACPNFQ*PSSWPS
Trigger: ACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACA...CGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCAAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCAAATAAGCATTATCAGTaGGTGAGAGCTCTAGGCACA +
Preference number: 2 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSNKHYQ*VRALGT
Trigger: TGTGCCTAGAGCTCTCACTCACTGATAATGCTTATT...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp TGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAACACCAGGGACTGAGTaGTCTCATATTCTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: CSLFQTYALKHLTCRFHITPGTE*SHILVQ
Trigger: TTGGACCAGAATATGAGATCACTCAGTCCCTGGTGT...TATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp TTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTGAAACTCAAATCTGCGACACCAGGGACTGAGTaGTCTCATATTCTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: FSLPKFLGKCISLKLKSATPGTE*SHILVQ
Trigger: TTGGACCAGAATATGAGATCACTCAGTCCCTGGTGT...CGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTT +
Preference number: 2 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLANASA*NSNLRL
Trigger: AAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGC...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATTCCCTTCTTCCTCATTaGGGGGTTCCATGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNSLLPH*GVPCQN
Trigger: ATTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGA...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp TTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: FKLGVSTMIQDHCFHLTEKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...TTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGTTGATCCCACTTTaGAATAAATGCCCAGAAGGT +
Preference number: 2 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMQLIPL*NKCPEG
Trigger: ACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTG...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACTTCAGTCACAGATCCTaGACATCTCAGTGTTGCTTC +
Preference number: 2 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHFSHRS*TSQCCF
Trigger: GAAGCAACACTGAGATGTCCAGGATCTGTGACTGAA...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTTATGGCCATCTCTGCTaGGTGAAAGGATGTATTATT +
Preference number: 2 (lower is better)
Translates to: VVMLPLSNICPQTPHMQIYGHLC*VKGCII
Trigger: AATAATACATCCTTTCACTCAGCAGAGATGGCCATA...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCATATGGCCATCTCTGCTaGGTGAAAGGATGTATTATT +
Preference number: 2 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSYGHLC*VKGCII
Trigger: AATAATACATCCTTTCACTCAGCAGAGATGGCCATA...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACCCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAAT +
Preference number: 2 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHPKAYS*SHFGIN
Trigger: ATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGG...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTCCTCTTTCAAACATATaGCCTCAAACACCTCACATG +
Preference number: 2 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVPLSNI*PQTPHM
Trigger: CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGG...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTACAATTTACCTCCAATaGGATCATATCTACCACGTG +
Preference number: 2 (lower is better)
Translates to: VVMLPLSNICPQTPHMQITIYLQ*DHIYHV
Trigger: CACGTGGTAGATATGATCCCATTGGAGGTAAATTGT...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGCAGTTGATCCCACTTTaGAATAAATGCCCAGAAGGT +
Preference number: 2 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLQLIPL*NKCPEG
Trigger: ACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTG...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCAGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTA +
Preference number: 2 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSEQKTL*SDTKGV
Trigger: TACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTC...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTAACTTCAAAGCACTATaGGAAACTCTTGATCACTGT +
Preference number: 2 (lower is better)
Translates to: VVMLPLSNICPQTPHMQINFKAL*ETLDHC
Trigger: ACAGTGATCAAGAGTTTCTCATAGTGCTTTGAAGTT...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp TTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACAGAAGCCATCTCTGCTGAGTaGAAGGATGTATTATTTACT +
Preference number: 2 (lower is better)
Translates to: FKLGVSTMIQDHCFHLTEAISAE*KDVLFT
Trigger: AGTAAATAATACATCCTTTCACTCAGCAGAGATGGC...TTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp AATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCAAAGTCTGTTGATTaGAGCCATGTTTTTCTTCTA +
Preference number: 2 (lower is better)
Translates to: NDSGPLFPPHRKDSCGDAPKSVD*SHVFLL
Trigger: TAGAAGAAAAACATGGCTTCAATCAACAGACTTTGG...AGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTAACCCCAAAGTCTGTTaGTTGAAGCCATGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVNPKVC*LKPCFS
Trigger: AGAAAAACATGGCTTCAATCAACAGACTTTGGGGTT...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR GCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATTCCCTTCTTCCTCATTaGGGGGTTCCATGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYSLLPH*GVPCQN
Trigger: ATTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGA...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp TTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTGAAACTCAAATCTGCGAGTGATCTCATATTCTaGTCCAAAGCCAGCATAACC +
Preference number: 2 (lower is better)
Translates to: FSLPKFLGKCISLKLKSASDLIF*SKASIT
Trigger: GGTTATGCTGGCTTTGGACCAGAATATGAGATCACT...CGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR CAA 90 bp TCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTaGATCCCACTTTGGAATAAATGCCCAGAAGGTAATAAGCATTAT +
Preference number: 2 (lower is better)
Translates to: SAEQKTLWSDTKGVQ*IPLWNKCPEGNKHY
Trigger: ATAATGCTTATTACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACAACTTCAAAGCACTATaGGAAACTCTTGATCACTGT +
Preference number: 2 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHNFKAL*ETLDHC
Trigger: ACAGTGATCAAGAGTTTCTCATAGTGCTTTGAAGTT...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp CAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAAAGAACCCCAAAGTCTGTTaGTTGAAGCCATGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: QMHQLETQICGLGLLGKKNPKVC*LKPCFS
Trigger: AGAAAAACATGGCTTCAATCAACAGACTTTGGGGTT...CTTTTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTCCTCAGGCAGAGGTGTaGATTTGTCAAATAAAGGGG +
Preference number: 2 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTPQAEV*ICQIKG
Trigger: CCCCTTTATTTGACAAATTCACACCTCTGCCTGAGG...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR GCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTCCACTTTGGAATAAATaGCCAGAAGGTAATAAGCAT +
Preference number: 2 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVPLWNK*PEGNKH
Trigger: ATGCTTATTACCTTCTGGGCATTTATTCCAAAGTGG...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp TGGCAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAATTATAAAGACTCCATaGCAAACCAGTCAATGCACT +
Preference number: 2 (lower is better)
Translates to: WQMHQLETQICGLGLLGKIIKTP*QTSQCT
Trigger: AGTGCATTGACTGGTTTGCCATGGAGTCTTTATAAT...TTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp TGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTCGCTTGTCCTCAGGCAGAGGTGTaGATTTGTCAAATAAAGGGG +
Preference number: 2 (lower is better)
Translates to: CLVQSTLLVECQTKLFACPQAEV*ICQIKG
Trigger: CCCCTTTATTTGACAAATTCACACCTCTGCCTGAGG...ACAAGCGAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTT +
Preference number: 2 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYANASA*NSNLRL
Trigger: AAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGC...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTA +
Preference number: 2 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNEQKTL*SDTKGV
Trigger: TACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTC...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATAACTTCAAAGCACTATaGGAAACTCTTGATCACTGT +
Preference number: 2 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNNFKAL*ETLDHC
Trigger: ACAGTGATCAAGAGTTTCTCATAGTGCTTTGAAGTT...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATCCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAAT +
Preference number: 2 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYPKAYS*SHFGIN
Trigger: ATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGG...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp ATTAAAGCAGAATATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAAGAAACACCAGGGACTaGGTGATCTCATATTCTGGT +
Preference number: 2 (lower is better)
Translates to: IKAEYKSLAFPSFLANASRNTRD*VISYSG
Trigger: ACCAGAATATGAGATCACTCAGTCCCTGGTGTTTCT...TGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp CAGCATGAAAGTAAGACCAGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCAAAGTCTGTTGATTaGAGCCATGTTTTTCTTCTA +
Preference number: 2 (lower is better)
Translates to: QHESKTRFQVRCEHNDSGPKSVD*SHVFLL
Trigger: TAGAAGAAAAACATGGCTTCAATCAACAGACTTTGG...TCCTGAATCATTGTGCTCACACCTAACTTGAAATCTGGTCTTACTTTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR GCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACACCTCTTTCAAACATATaGCCTCAAACACCTCACATG +
Preference number: 2 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTPLSNI*PQTPHM
Trigger: CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGG...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp TTTCTTCTATCACAAAAGTATTATAAAGACTCCATGGCAAACCAGTCAATGCACAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: FLLSQKYYKDSMANQSMHKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...GTGCATTGACTGGTTTGCCATGGAGTCTTTATAATACTTTTGTGATAGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR CCA 90 bp AAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACATACACCTTATTATAAAGACTCCATaGCAAACCAGTCAATGCACT +
Preference number: 2 (lower is better)
Translates to: KISIAVGRAFRSFHNIHLIIKTP*QTSQCT
Trigger: AGTGCATTGACTGGTTTGCCATGGAGTCTTTATAAT...AAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR TCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATTATGGCCATCTCTGCTaGGTGAAAGGATGTATTATT +
Preference number: 2 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYYGHLC*VKGCII
Trigger: AATAATACATCCTTTCACTCAGCAGAGATGGCCATA...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTATAGTTTTCAAAGCTTaGAGTCTCTCTAGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTIVFKA*SLSSSG
Trigger: TCCACTGCTAGAGAGACTTCAAGCTTTGAAAACTAT...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp ATTAAAGCAGAATATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCACCTCTTTCAAACATATaGCCTCAAACACCTCACATG +
Preference number: 2 (lower is better)
Translates to: IKAEYKSLAFPSFLANASPLSNI*PQTPHM
Trigger: CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGG...TGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp CACAGGCAACAAAATACACTGAGTCACAACAAATTTCTTGATTGCATCTTTCATTGGCAAACCAGTCAATaGACTGAAAAGTGTAGCCAA +
Preference number: 2 (lower is better)
Translates to: HRQQNTLSHNKFLDCIFHWQTSQ*TEKCSQ
Trigger: TTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCA...ATGAAAGATGCAATCAAGAAATTTGTTGTGACTCAGTGTATTTTGTTGCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR CCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTA +
Preference number: 2 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYEQKTL*SDTKGV
Trigger: TACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTC...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTATGCCAGAATCCTCCTaGATGTCTTTGTTTAGTACA +
Preference number: 2 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTMPESS*MSLFST
Trigger: TGTACTAAACAAAGACATCCAGGAGGATTCTGGCAT...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR TCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTAACTTCAAAGCACTATaGGAAACTCTTGATCACTGT +
Preference number: 2 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTNFKAL*ETLDHC
Trigger: ACAGTGATCAAGAGTTTCTCATAGTGCTTTGAAGTT...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTCTCAAACACCTCACATaGAGATTCCATATAAGTATA +
Preference number: 2 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTLKHLT*RFHISI
Trigger: TATACTTATATGGAATCTGCATGTGAGGTGTTTGAG...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR GCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACACTCAAACACCTCACATaGAGATTCCATATAAGTATA +
Preference number: 2 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTLKHLT*RFHISI
Trigger: TATACTTATATGGAATCTGCATGTGAGGTGTTTGAG...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 72 bp CTTCACTGTTCCCTTCTTCCTCATTGCGGGGTTCCATaGCAGAATCCTCCTGGATGTCTTTGTTTAGTACAG +
Preference number: 3 (lower is better)
Translates to: LHCSLLPHCGVP*QNPPGCLCLVQ
Trigger: CTGTACTAAACAAAGACATCCAGGAGGATTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGAACAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR TCA 72 bp ACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTaGTGCTCCCTCTTTCAAACATATGCCCTCAAACAC +
Preference number: 3 (lower is better)
Translates to: TTVSTSQKGFLW*CSLFQTYALKH
Trigger: GTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR CCA 72 bp TTGACTGTATGTCCCAACTTCCAGTGCCCCAGTTCATaGCCTAGTACAGCGAGTACCTCCTCATTTTTACAT +
Preference number: 3 (lower is better)
Translates to: LTVCPNFQCPSS*PSTASTSSFLH
Trigger: ATGTAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACATACAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CAA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATTTCCCTTCTTCCTCATaGCGGGGTTCCATGCCAGAA +
Preference number: 3 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNFPSSS*RGSMPE
Trigger: TTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGAA...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CAA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACGGCAAATGCATCAGCTaGAAACTCAAATCTGCGGCT +
Preference number: 3 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHGKCIS*KLKSAA
Trigger: AGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCC...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 72 bp ATAATGATATTTTTGACTGTATGTCCCAACTTCCAGTaGCCCAGTTCATGGCCTAGTACAGCGAGTACCTCC +
Preference number: 3 (lower is better)
Translates to: IMIFLTVCPNFQ*PSSWPSTASTS
Trigger: GGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACATACAGTCAAAAATATCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR CCA 72 bp GACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTACAGTTGATCCCACTT +
Preference number: 3 (lower is better)
Translates to: DITQMSAEQKTL*SDTKGVQLIPL
Trigger: AAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CAA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCAACCAAAGGCGTACAGTaGATCCCACTTTGGAATAAA +
Preference number: 3 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSTKGVQ*IPLWNK
Trigger: TTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGT...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CAA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGGGCAGAGGTGTGAATTaGTCAAATAAAGGGGCAATA +
Preference number: 3 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMGRGVN*SNKGAI
Trigger: TATTGCCCCTTTATTTGACAAATTCACACCTCTGCC...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR TCA 72 bp TTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTTAGGACTGTTAGGCAA +
Preference number: 3 (lower is better)
Translates to: LAFPSFLANASA*NSNLRLRTVRQ
Trigger: TTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 72 bp AGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATaGCCTCAAACACCTCACATGCAGATTCCATATAAG +
Preference number: 3 (lower is better)
Translates to: RIPVVMLPLSNI*PQTPHMQIPYK
Trigger: CTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CAA 90 bp TTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTGAAACTCAAATCTGCGGAACCCCAAAGTCTGTaGATTGAAGCCATGTTTTTC +
Preference number: 3 (lower is better)
Translates to: FSLPKFLGKCISLKLKSAEPQSL*IEAMFF
Trigger: GAAAAACATGGCTTCAATCAACAGACTTTGGGGTTC...CGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR CAA 90 bp AAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACATACACCTTGAACCCCAAAGTCTGTaGATTGAAGCCATGTTTTTC +
Preference number: 3 (lower is better)
Translates to: KISIAVGRAFRSFHNIHLEPQSL*IEAMFF
Trigger: GAAAAACATGGCTTCAATCAACAGACTTTGGGGTTC...AAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR-3UTR CAA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTTCCAATAAGAGTGGGTaGGCTATCATAAAAACCAAA +
Preference number: 3 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVSNKSG*AIIKTK
Trigger: TTTGGTTTTTATGATAGCCAACCCACTCTTATTGGA...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 72 bp AAAAGTATTATAAAGACTCCATGGCAAACCAGTCAATaGACTGAAAAGTGTAGCCAACAGCAGAAACACCAG +
Preference number: 3 (lower is better)
Translates to: KSIIKTPWQTSQ*TEKCSQQQKHQ
Trigger: CTGGTGTTTCTGCTGTTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCATGGAGTCTTTATAATACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
3UTR TCA 72 bp AAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAATGCCCAGAAGGTAATA +
Preference number: 3 (lower is better)
Translates to: KRLYGQIPKAYS*SHFGINAQKVI
Trigger: TATTACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR-3UTR CAA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATTCCAATAAGAGTGGGTaGGCTATCATAAAAACCAAA +
Preference number: 3 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYSNKSG*AIIKTK
Trigger: TTTGGTTTTTATGATAGCCAACCCACTCTTATTGGA...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR GCA 72 bp CAACAAAATACACTGAGTCACAACAAATTTCTTGATTaGATCTTTCATGAAGAACCCCAAAGTCTGTTGATT +
Preference number: 3 (lower is better)
Translates to: QQNTLSHNKFLD*IFHEEPQSLLI
Trigger: AATCAACAGACTTTGGGGTTCTTCATGAAAGATGCAATCAAGAAATTTGTTGTGACTCAGTGTATTTTGTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR GCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTCAAAGCGTCCAGCGATaGCCACATCCCCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFQSVQR*PHPHGH
Trigger: GTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTG...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGATGCCCACATCCCCATaGCCACCCGGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLMPTSP*PPGSAG
Trigger: GCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCAT...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTCAGTGCCCCAGTTCATaGCCTAGTACAGCGAGTACC +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFQCPSS*PSTAST
Trigger: GGTACTCGCTGTACTAGGCCATGAACTGGGGCACTG...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGGCAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAACCGGCTCCTTCAGCGTaGACCGGTGCCACACCGACA +
Preference number: 4 (lower is better)
Translates to: WQMHQLETQICGLGLLGKPAPSA*TGATPT
Trigger: TGTCGGTGTGGCACCGGTGCACGCTGAAGGAGCCGG...TTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAAAGATGCCCACATCCCCATaGCCACCCGGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: QMHQLETQICGLGLLGKKMPTSP*PPGSAG
Trigger: GCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCAT...CTTTTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp TTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTGAAACTCAAATCTGCGATGCCCACATCCCCATaGCCACCCGGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FSLPKFLGKCISLKLKSAMPTSP*PPGSAG
Trigger: GCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCAT...CGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGTTCAGCGTGCACCGGTaGCACACCGACACTCGTCCC +
Preference number: 4 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLFSVHR*HTDTRP
Trigger: GGGACGAGTGTCGGTGTGGCACCGGTGCACGCTGAA...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTCAAAGCGTCCAGCGATaGCCACATCCCCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVQSVQR*PHPHGH
Trigger: GTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTG...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATCCGGCTCCTTCAGCGTaGACCGGTGCCACACCGACA +
Preference number: 4 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNPAPSA*TGATPT
Trigger: TGTCGGTGTGGCACCGGTGCACGCTGAAGGAGCCGG...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GGAAGAGCGTTTAGATCCTTCCACAACATACACCTTCGTCAAAGGAAAGTCAATCAAAGCGTCCAGCGATaGCCACATCCCCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRAFRSFHNIHLRQRKVNQSVQR*PHPHGH
Trigger: GTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTG...ATTGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTCAGTCACAGATCCTaGACATCTCAGTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFFSHRS*TSQCCF
Trigger: GAAGCAACACTGAGATGTCCAGGATCTGTGACTGAA...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAGGTGACAGGATTGCCTaGGCCTGGGAAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: CSLFQTYALKHLTCRFHIGDRIA*AWEVKA
Trigger: AGCCTTGACTTCCCAGGCTCAGGCAATCCTGTCACC...TATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675754.1
CDS-3UTR GCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTGGCAAACCAGTCAATaGACTGAAAAGTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFWQTSQ*TEKCSQ
Trigger: TTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCA...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCCATTGCGGGGTTCCATaGCAGAATCCTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RKDSCGDAPSFKHMPSNTHCGVP*QNPPGC
Trigger: ACATCCAGGAGGATTCTGGCATGGAACCCCGCAATG...GGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATTGTCCCAACTTCCAGTaGCCCAGTTCATGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: HNDSGPLFPPHRKDSCGDCPNFQ*PSSWPS
Trigger: ACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACA...ATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGATGCCCACATCCCCATaGCCACCCGGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLMPTSP*PPGSAG
Trigger: GCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCAT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTAGAATAATGCCACATTaGGAACAACCAGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFRIMPH*EQPVRN
Trigger: GTTTCTGACTGGTTGTTCTCAATGTGGCATTATTCT...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTATGGCCATCTCTGCTaGGTGAAAGGATGTATTATT +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFYGHLC*VKGCII
Trigger: AATAATACATCCTTTCACTCAGCAGAGATGGCCATA...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACCATTGCGGGGTTCCATaGCAGAATCCTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHHCGVP*QNPPGC
Trigger: ACATCCAGGAGGATTCTGGCATGGAACCCCGCAATG...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTTCCCTTCTTCCTCATTaGGGGGTTCCATGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VVMLPLSNICPQTPHMQISLLPH*GVPCQN
Trigger: ATTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGA...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATTTCAGCGTGCACCGGTaGCACACCGACACTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYFSVHR*HTDTRP
Trigger: GGGACGAGTGTCGGTGTGGCACCGGTGCACGCTGAA...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS-3UTR CCA 90 bp TGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATACAGTGCCCCAGTTCATaGCCTAGTACAGCGAGTACC +
Preference number: 4 (lower is better)
Translates to: CSLFQTYALKHLTCRFHIQCPSS*PSTAST
Trigger: GGTACTCGCTGTACTAGGCCATGAACTGGGGCACTG...TATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTACAATTTACCTCCAATaGGATCATATCTACCACGTG +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFTIYLQ*DHIYHV
Trigger: CACGTGGTAGATATGATCCCATTGGAGGTAAATTGT...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFEQKTL*SDTKGV
Trigger: TACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTC...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATACACCAGGGACTGAGTaGTCTCATATTCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HNDSGPLFPPHRKDSCGDTPGTE*SHILVQ
Trigger: TTGGACCAGAATATGAGATCACTCAGTCCCTGGTGT...ATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTACACCAGGGACTGAGTaGTCTCATATTCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: VVMLPLSNICPQTPHMQITPGTE*SHILVQ
Trigger: TTGGACCAGAATATGAGATCACTCAGTCCCTGGTGT...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTACATCCTTGTTAGAAACACCAGGGACTaGGTGATCTCATATTCTGGT +
Preference number: 4 (lower is better)
Translates to: APVHGLVQRVPPHFYILVRNTRD*VISYSG
Trigger: ACCAGAATATGAGATCACTCAGTCCCTGGTGTTTCT...AACAAGGATGTAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCTCAGGCAGAGGTGTaGATTTGTCAAATAAAGGGG +
Preference number: 4 (lower is better)
Translates to: NDSGPLFPPHRKDSCGDAPQAEV*ICQIKG
Trigger: CCCCTTTATTTGACAAATTCACACCTCTGCCTGAGG...AGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACACAAAGCGTCCAGCGATaGCCACATCCCCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTQSVQR*PHPHGH
Trigger: GTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTG...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGTCCCTTCTTCCTCATTaGGGGGTTCCATGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLSLLPH*GVPCQN
Trigger: ATTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGA...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGGCAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAATCCCTTCTTCCTCATTaGGGGGTTCCATGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WQMHQLETQICGLGLLGKSLLPH*GVPCQN
Trigger: ATTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGA...TTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp GCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTACATCCTTGTTGTTGACAATGACCAATaGAGAGCAATCATCGGAGCT +
Preference number: 4 (lower is better)
Translates to: APVHGLVQRVPPHFYILVVDNDQ*RAIIGA
Trigger: AGCTCCGATGATTGCTCTCCATTGGTCATTGTCAAC...AACAAGGATGTAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS-3UTR TCA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCAGTCCTGACCAGAAGCTaGAAGTGCTTTTATCCAGTT +
Preference number: 4 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSVLTRS*KCFYPV
Trigger: AACTGGATAAAAGCACTTTCAGCTTCTGGTCAGGAC...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCAAGAAACACCAGGGACTaGGTGATCTCATATTCTGGT +
Preference number: 4 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSRNTRD*VISYSG
Trigger: ACCAGAATATGAGATCACTCAGTCCCTGGTGTTTCT...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTTTATATATCCTTCTCTaGCGCTGTGCTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VVMLPLSNICPQTPHMQILYILL*RCARKV
Trigger: GACCTTCCTAGCACAGCGGCAGAGAAGGATATATAA...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTACATCCTTGTTTGGCAAACCAGTCAATaGACTGAAAAGTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: APVHGLVQRVPPHFYILVWQTSQ*TEKCSQ
Trigger: TTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCA...AACAAGGATGTAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATCATTGCGGGGTTCCATaGCAGAATCCTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNHCGVP*QNPPGC
Trigger: ACATCCAGGAGGATTCTGGCATGGAACCCCGCAATG...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTTTCAGTCACAGATCCTaGACATCTCAGTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: NDSGPLFPPHRKDSCGDAFSHRS*TSQCCF
Trigger: GAAGCAACACTGAGATGTCCAGGATCTGTGACTGAA...AGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: VVMLPLSNICPQTPHMQIKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: NDSGPLFPPHRKDSCGDAKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...AGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
3UTR CAA 72 bp TTGCGGGGTTCCATGCCAGAATCCTCCTGGATGTCTTaGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LRGSMPESSWMS*FSTEYSSSRVS
Trigger: TGACACTCTACTAGAAGAGTACTCTGTACTAAACAAAGACATCCAGGAGGATTCTGGCATGGAACCCCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACATGTTTCAGAATCCATaGTCTGTCCTAACTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHMFQNP*SVLTPV
Trigger: CACCGGAGTTAGGACAGATCATGGATTCTGAAACAT...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp ACTGAAAAGTGTAGCCAACAGCAGAAACACCAGGGACTGAGTGATCTCATATTCGTCCTGACCAGAAGCTaGAAGTGCTTTTATCCAGTT +
Preference number: 4 (lower is better)
Translates to: TEKCSQQQKHQGLSDLIFVLTRS*KCFYPV
Trigger: AACTGGATAAAAGCACTTTCAGCTTCTGGTCAGGAC...GAATATGAGATCACTCAGTCCCTGGTGTTTCTGCTGTTGGCTACACTTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp CAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAAAGACACCAGGGACTGAGTaGTCTCATATTCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: QMHQLETQICGLGLLGKKTPGTE*SHILVQ
Trigger: TTGGACCAGAATATGAGATCACTCAGTCCCTGGTGT...CTTTTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GAAGCCATAAAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACCCTCAGGCAGAGGTGTaGATTTGTCAAATAAAGGGG +
Preference number: 4 (lower is better)
Translates to: EAIKISIAVGRAFRSFHNPQAEV*ICQIKG
Trigger: CCCCTTTATTTGACAAATTCACACCTCTGCCTGAGG...GTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTTTATGGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp ACTGAAAAGTGTAGCCAACAGCAGAAACACCAGGGACTGAGTGATCTCATATTCGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: TEKCSQQQKHQGLSDLIFANASA*NSNLRL
Trigger: AAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGC...GAATATGAGATCACTCAGTCCCTGGTGTTTCTGCTGTTGGCTACACTTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHANASA*NSNLRL
Trigger: AAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGC...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GTCCAAAGCCAGCATAACCACAGAACCGTCCAGAAAGTCTCCAGAGATAAGGTAAGAATAATGCCACATTaGGAACAACCAGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VQSQHNHRTVQKVSRDKVRIMPH*EQPVRN
Trigger: GTTTCTGACTGGTTGTTCTCAATGTGGCATTATTCT...TACCTTATCTCTGGAGACTTTCTGGACGGTTCTGTGGTTATGCTGGCTTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp CTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATAATAAGCATTATCAGTaGGTGAGAGCTCTAGGCACA +
Preference number: 4 (lower is better)
Translates to: LFPPHRKDSCGDAPSFKHNKHYQ*VRALGT
Trigger: TGTGCCTAGAGCTCTCACTCACTGATAATGCTTATT...ATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMPKAYS*SHFGIN
Trigger: ATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGG...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTTGGCAAACCAGTCAATaGACTGAAAAGTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: NDSGPLFPPHRKDSCGDAWQTSQ*TEKCSQ
Trigger: TTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCA...AGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGCTTGAAACTCAAATCTaGGGCTTAGGACTGTTAGGC +
Preference number: 4 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLLETQI*GLGLLG
Trigger: GCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAG...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATCCTCTTTCAAACATATaGCCTCAAACACCTCACATG +
Preference number: 4 (lower is better)
Translates to: HNDSGPLFPPHRKDSCGDPLSNI*PQTPHM
Trigger: CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGG...ATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCCCTCTTTCAAACATATaGCCTCAAACACCTCACATG +
Preference number: 4 (lower is better)
Translates to: RKDSCGDAPSFKHMPSNTPLSNI*PQTPHM
Trigger: CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGG...GGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATAGTGATCTCATATTCTaGTCCAAAGCCAGCATAACC +
Preference number: 4 (lower is better)
Translates to: HNDSGPLFPPHRKDSCGDSDLIF*SKASIT
Trigger: GGTTATGCTGGCTTTGGACCAGAATATGAGATCACT...ATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTAAAAACATCAAGAGCTaGAACATGCTGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVKNIKS*NMLPGQ
Trigger: CTGTCCTGGCAGCATGTTCCAGCTCTTGATGTTTTT...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCAGTTGATCCCACTTTaGAATAAATGCCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: VVMLPLSNICPQTPHMQIQLIPL*NKCPEG
Trigger: ACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTG...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GGAAGAGCGTTTAGATCCTTCCACAACATACACCTTCGTCAAAGGAAAGTCAATGTCCTGACCAGAAGCTaGAAGTGCTTTTATCCAGTT +
Preference number: 4 (lower is better)
Translates to: GRAFRSFHNIHLRQRKVNVLTRS*KCFYPV
Trigger: AACTGGATAAAAGCACTTTCAGCTTCTGGTCAGGAC...ATTGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGAACCCCAAAGTCTGTTaGTTGAAGCCATGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMNPKVC*LKPCFS
Trigger: AGAAAAACATGGCTTCAATCAACAGACTTTGGGGTT...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATAATCAGCATAGATTGTaGCAAGAACCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: HNDSGPLFPPHRKDSCGDNQHRL*QEPETQ
Trigger: TTGTGTCTCTGGTTCTTGTCACAATCTATGCTGATT...ATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCAAATCAGCATAGATTGTaGCAAGAACCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSNQHRL*QEPETQ
Trigger: TTGTGTCTCTGGTTCTTGTCACAATCTATGCTGATT...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GAAGCCATAAAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: EAIKISIAVGRAFRSFHNANASA*NSNLRL
Trigger: AAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGC...GTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTTTATGGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp CTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATAGAATAATGCCACATTaGGAACAACCAGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LFPPHRKDSCGDAPSFKHRIMPH*EQPVRN
Trigger: GTTTCTGACTGGTTGTTCTCAATGTGGCATTATTCT...ATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATATAGTTTTCAAAGCTTaGAGTCTCTCTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: HNDSGPLFPPHRKDSCGDIVFKA*SLSSSG
Trigger: TCCACTGCTAGAGAGACTTCAAGCTTTGAAAACTAT...ATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGGCCATCTCTGCTGAGTaGAAGGATGTATTATTTACT +
Preference number: 4 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMAISAE*KDVLFT
Trigger: AGTAAATAATACATCCTTTCACTCAGCAGAGATGGC...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATTATGGCCATCTCTGCTaGGTGAAAGGATGTATTATT +
Preference number: 4 (lower is better)
Translates to: LFPPHRKDSCGDAPSFKHYGHLC*VKGCII
Trigger: AATAATACATCCTTTCACTCAGCAGAGATGGCCATA...ATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTAATAAGCATTATCAGTaGGTGAGAGCTCTAGGCACA +
Preference number: 4 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVNKHYQ*VRALGT
Trigger: TGTGCCTAGAGCTCTCACTCACTGATAATGCTTATT...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGCCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLPKAYS*SHFGIN
Trigger: ATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGG...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTAAGTCAAGGCTCCAGTaGGCCGTGATTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTKSRLQ*AVIVTL
Trigger: CAGTGTCACAATCACGGCTCACTGGAGCCTTGACTT...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675754.1
CDS-3UTR GCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACCCTCTTTCAAACATATaGCCTCAAACACCTCACATG +
Preference number: 4 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHPLSNI*PQTPHM
Trigger: CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGG...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTACATCCTTGTTCCACTTTGGAATAAATaGCCAGAAGGTAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: APVHGLVQRVPPHFYILVPLWNK*PEGNKH
Trigger: ATGCTTATTACCTTCTGGGCATTTATTCCAAAGTGG...AACAAGGATGTAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGCAGTGCCCCAGTTCATaGCCTAGTACAGCGAGTACC +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLQCPSS*PSTAST
Trigger: GGTACTCGCTGTACTAGGCCATGAACTGGGGCACTG...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp GAAGCCATAAAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACTTCAGTCACAGATCCTaGACATCTCAGTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: EAIKISIAVGRAFRSFHNFSHRS*TSQCCF
Trigger: GAAGCAACACTGAGATGTCCAGGATCTGTGACTGAA...GTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTTTATGGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CCA 90 bp CTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATACAATTTACCTCCAATaGGATCATATCTACCACGTG +
Preference number: 4 (lower is better)
Translates to: LFPPHRKDSCGDAPSFKHTIYLQ*DHIYHV
Trigger: CACGTGGTAGATATGATCCCATTGGAGGTAAATTGT...ATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCACAATTTACCTCCAATaGGATCATATCTACCACGTG +
Preference number: 4 (lower is better)
Translates to: RKDSCGDAPSFKHMPSNTTIYLQ*DHIYHV
Trigger: CACGTGGTAGATATGATCCCATTGGAGGTAAATTGT...GGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTCATTCTACGGTCGTTTaGCATTTGAAGCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVHSTVV*HLKQTS
Trigger: GGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATG...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS-3UTR TCA 90 bp CAAAGCCAGCATAACCACAGAACCGTCCAGAAAGTCTCCAGAGATAAGGTATTCAACTCCGGTGGTACATaGGTTGTTGTTTTATATATC +
Preference number: 4 (lower is better)
Translates to: QSQHNHRTVQKVSRDKVFNSGGT*VVVLYI
Trigger: GATATATAAAACAACAACTCATGTACCACCGGAGTT...GAATACCTTATCTCTGGAGACTTTCTGGACGGTTCTGTGGTTATGCTGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGAACTCCGGTGGTACATaGGTTGTTGTTTTATATATC +
Preference number: 4 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMNSGGT*VVVLYI
Trigger: GATATATAAAACAACAACTCATGTACCACCGGAGTT...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATCCAAAGTCTGTTGATTaGAGCCATGTTTTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LFPPHRKDSCGDAPSFKHPKSVD*SHVFLL
Trigger: TAGAAGAAAAACATGGCTTCAATCAACAGACTTTGG...ATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACAACCCCAAAGTCTGTTaGTTGAAGCCATGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHNPKVC*LKPCFS
Trigger: AGAAAAACATGGCTTCAATCAACAGACTTTGGGGTT...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGAATCAGCATAGATTGTaGCAAGAACCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLNQHRL*QEPETQ
Trigger: TTGTGTCTCTGGTTCTTGTCACAATCTATGCTGATT...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATGCAAATGCATCAGCTTaGAACTCAAATCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNANASA*NSNLRL
Trigger: AAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGC...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp ATAACCACAGAACCGTCCAGAAAGTCTCCAGAGATAAGGTATTCCTCCAAAGAGATAGTTTTCAAAGCTTaGAGTCTCTCTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ITTEPSRKSPEIRYSSKEIVFKA*SLSSSG
Trigger: TCCACTGCTAGAGAGACTTCAAGCTTTGAAAACTAT...CTCTTTGGAGGAATACCTTATCTCTGGAGACTTTCTGGACGGTTCTGTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp TGGCAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAGCCATCTCTGCTGAGTaGAAGGATGTATTATTTACT +
Preference number: 4 (lower is better)
Translates to: WQMHQLETQICGLGLLGKAISAE*KDVLFT
Trigger: AGTAAATAATACATCCTTTCACTCAGCAGAGATGGC...TTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACAGAATATGGCCATCTCTGCTaGGTGAAAGGATGTATTATT +
Preference number: 4 (lower is better)
Translates to: FKLGVSTMIQDHCFHLTEYGHLC*VKGCII
Trigger: AATAATACATCCTTTCACTCAGCAGAGATGGCCATA...TTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATATGGCAAACCAGTCAATaGACTGAAAAGTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: CSLFQTYALKHLTCRFHIWQTSQ*TEKCSQ
Trigger: TTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCA...TATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGTGTCCCAACTTCCAGTaGCCCAGTTCATGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLCPNFQ*PSSWPS
Trigger: ACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACA...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTCGCTTGTTGTCCCAACTTCCAGTaGCCCAGTTCATGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: CLVQSTLLVECQTKLFACCPNFQ*PSSWPS
Trigger: ACTAGGCCATGAACTGGGGCACTGGAAGTTGGGACA...ACAAGCGAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CAGCATGAAAGTAAGACCAGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACTTGAAACTCAAATCTaGGGCTTAGGACTGTTAGGC +
Preference number: 4 (lower is better)
Translates to: QHESKTRFQVRCEHNDSGLETQI*GLGLLG
Trigger: GCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAG...TCCTGAATCATTGTGCTCACACCTAACTTGAAATCTGGTCTTACTTTCATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp CTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATCCACTTTGGAATAAATaGCCAGAAGGTAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: LFPPHRKDSCGDAPSFKHPLWNK*PEGNKH
Trigger: ATGCTTATTACCTTCTGGGCATTTATTCCAAAGTGG...ATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTATTATAAAGACTCCATaGCAAACCAGTCAATGCACT +
Preference number: 4 (lower is better)
Translates to: NDSGPLFPPHRKDSCGDAIIKTP*QTSQCT
Trigger: AGTGCATTGACTGGTTTGCCATGGAGTCTTTATAAT...AGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTATGCCAGAATCCTCCTaGATGTCTTTGTTTAGTACA +
Preference number: 4 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVMPESS*MSLFST
Trigger: TGTACTAAACAAAGACATCCAGGAGGATTCTGGCAT...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp TGGCAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAATGCCAGAATCCTCCTaGATGTCTTTGTTTAGTACA +
Preference number: 4 (lower is better)
Translates to: WQMHQLETQICGLGLLGKMPESS*MSLFST
Trigger: TGTACTAAACAAAGACATCCAGGAGGATTCTGGCAT...TTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACAGAACCAAAGTCTGTTGATTaGAGCCATGTTTTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: FKLGVSTMIQDHCFHLTEPKSVD*SHVFLL
Trigger: TAGAAGAAAAACATGGCTTCAATCAACAGACTTTGG...TTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAAAGAATCAGCATAGATTGTaGCAAGAACCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: QMHQLETQICGLGLLGKKNQHRL*QEPETQ
Trigger: TTGTGTCTCTGGTTCTTGTCACAATCTATGCTGATT...CTTTTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACACCTCAGGCAGAGGTGTaGATTTGTCAAATAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTPQAEV*ICQIKG
Trigger: CCCCTTTATTTGACAAATTCACACCTCTGCCTGAGG...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp GAAGCCATAAAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACAGAATAATGCCACATTaGGAACAACCAGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: EAIKISIAVGRAFRSFHNRIMPH*EQPVRN
Trigger: GTTTCTGACTGGTTGTTCTCAATGTGGCATTATTCT...GTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTTTATGGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp TGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAATAGTTTTCAAAGCTTaGAGTCTCTCTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CSLFQTYALKHLTCRFHIIVFKA*SLSSSG
Trigger: TCCACTGCTAGAGAGACTTCAAGCTTTGAAAACTAT...TATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATGCTAAGTTTCTTGGCAAATaGATCAGCTTGAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: NDSGPLFPPHRKDSCGDAKFLGK*ISLKLK
Trigger: TTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTT...AGCATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCTCAAACACCTCACATaGAGATTCCATATAAGTATA +
Preference number: 4 (lower is better)
Translates to: VVMLPLSNICPQTPHMQILKHLT*RFHISI
Trigger: TATACTTATATGGAATCTGCATGTGAGGTGTTTGAG...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACATACACCTTCCTCTTTCAAACATATaGCCTCAAACACCTCACATG +
Preference number: 4 (lower is better)
Translates to: KISIAVGRAFRSFHNIHLPLSNI*PQTPHM
Trigger: CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGG...AAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR GCA 90 bp ACTGAAAAGTGTAGCCAACAGCAGAAACACCAGGGACTGAGTGATCTCATATTCCCACTTTGGAATAAATaGCCAGAAGGTAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: TEKCSQQQKHQGLSDLIFPLWNK*PEGNKH
Trigger: ATGCTTATTACCTTCTGGGCATTTATTCCAAAGTGG...GAATATGAGATCACTCAGTCCCTGGTGTTTCTGCTGTTGGCTACACTTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CCA 90 bp CAGCATGAAAGTAAGACCAGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACAGTTGATCCCACTTTaGAATAAATGCCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: QHESKTRFQVRCEHNDSGQLIPL*NKCPEG
Trigger: ACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTG...TCCTGAATCATTGTGCTCACACCTAACTTGAAATCTGGTCTTACTTTCATGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATGTCCTGACCAGAAGCTaGAAGTGCTTTTATCCAGTT +
Preference number: 4 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYVLTRS*KCFYPV
Trigger: AACTGGATAAAAGCACTTTCAGCTTCTGGTCAGGAC...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATAGAAACACCAGGGACTaGGTGATCTCATATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYRNTRD*VISYSG
Trigger: ACCAGAATATGAGATCACTCAGTCCCTGGTGTTTCT...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTAGAAACACCAGGGACTaGGTGATCTCATATTCTGGT +
Preference number: 4 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTRNTRD*VISYSG
Trigger: ACCAGAATATGAGATCACTCAGTCCCTGGTGTTTCT...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACATACACCTTATAGTTTTCAAAGCTTaGAGTCTCTCTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KISIAVGRAFRSFHNIHLIVFKA*SLSSSG
Trigger: TCCACTGCTAGAGAGACTTCAAGCTTTGAAAACTAT...AAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp TGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAACTTCAAAGCACTATaGGAAACTCTTGATCACTGT +
Preference number: 4 (lower is better)
Translates to: CSLFQTYALKHLTCRFHINFKAL*ETLDHC
Trigger: ACAGTGATCAAGAGTTTCTCATAGTGCTTTGAAGTT...TATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGATCATAAAAACCAAATaGAGCAAAAAGCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLIIKTK*SKKLLS
Trigger: CGAAAGGAGCTTTTTGCTGCATTTGGTTTTTATGAT...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTCTTGAAACTCAAATCTaGGGCTTAGGACTGTTAGGC +
Preference number: 4 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTLETQI*GLGLLG
Trigger: GCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAG...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp ACTGAAAAGTGTAGCCAACAGCAGAAACACCAGGGACTGAGTGATCTCATATTCAAGTTTCTTGGCAAATaGATCAGCTTGAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: TEKCSQQQKHQGLSDLIFKFLGK*ISLKLK
Trigger: TTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTT...GAATATGAGATCACTCAGTCCCTGGTGTTTCTGCTGTTGGCTACACTTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CCA 90 bp GGAAGAGCGTTTAGATCCTTCCACAACATACACCTTCGTCAAAGGAAAGTCAATATTATAAAGACTCCATaGCAAACCAGTCAATGCACT +
Preference number: 4 (lower is better)
Translates to: GRAFRSFHNIHLRQRKVNIIKTP*QTSQCT
Trigger: AGTGCATTGACTGGTTTGCCATGGAGTCTTTATAAT...ATTGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATTTCAGTCACAGATCCTaGACATCTCAGTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYFSHRS*TSQCCF
Trigger: GAAGCAACACTGAGATGTCCAGGATCTGTGACTGAA...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTACATCCTTGTTTCTTAGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: SSWPSTASTSSFLHPCFLEQKTL*SDTKGV
Trigger: TACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTC...TAAGAAACAAGGATGTAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATCCAAAGTCTGTTGATTaGAGCCATGTTTTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNPKSVD*SHVFLL
Trigger: TAGAAGAAAAACATGGCTTCAATCAACAGACTTTGG...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACACCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTPKAYS*SHFGIN
Trigger: ATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGG...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTCGCTTGTCTTGAAACTCAAATCTaGGGCTTAGGACTGTTAGGC +
Preference number: 4 (lower is better)
Translates to: CLVQSTLLVECQTKLFACLETQI*GLGLLG
Trigger: GCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAG...ACAAGCGAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATATTATAAAGACTCCATaGCAAACCAGTCAATGCACT +
Preference number: 4 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNIIKTP*QTSQCT
Trigger: AGTGCATTGACTGGTTTGCCATGGAGTCTTTATAAT...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATCAGTTGATCCCACTTTaGAATAAATGCCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYQLIPL*NKCPEG
Trigger: ACCTTCTGGGCATTTATTCCAAAGTGGGATCAACTG...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACAGCCATCTCTGCTGAGTaGAAGGATGTATTATTTACT +
Preference number: 4 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTAISAE*KDVLFT
Trigger: AGTAAATAATACATCCTTTCACTCAGCAGAGATGGC...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTATGGCCATCTCTGCTaGGTGAAAGGATGTATTATT +
Preference number: 4 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTYGHLC*VKGCII
Trigger: AATAATACATCCTTTCACTCAGCAGAGATGGCCATA...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGAATAAGCATTATCAGTaGGTGAGAGCTCTAGGCACA +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLNKHYQ*VRALGT
Trigger: TGTGCCTAGAGCTCTCACTCACTGATAATGCTTATT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTTCTTCTATCACAAAAGTATTATAAAGACTCCATGGCAAACCAGTCAATGCACCCAAAGGCGTACAGTTaGTCCCACTTTGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: FLLSQKYYKDSMANQSMHPKAYS*SHFGIN
Trigger: ATTTATTCCAAAGTGGGATCAACTGTACGCCTTTGG...GTGCATTGACTGGTTTGCCATGGAGTCTTTATAATACTTTTGTGATAGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR GCA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATAAGTTTCTTGGCAAATaGATCAGCTTGAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNKFLGK*ISLKLK
Trigger: TTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTT...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACAGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTEQKTL*SDTKGV
Trigger: TACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTC...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGAACCCCAAAGTCTGTTaGTTGAAGCCATGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLNPKVC*LKPCFS
Trigger: AGAAAAACATGGCTTCAATCAACAGACTTTGGGGTT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTCGCTTGTGCCATCTCTGCTGAGTaGAAGGATGTATTATTTACT +
Preference number: 4 (lower is better)
Translates to: CLVQSTLLVECQTKLFACAISAE*KDVLFT
Trigger: AGTAAATAATACATCCTTTCACTCAGCAGAGATGGC...ACAAGCGAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACTAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACAATTATAAAGACTCCATaGCAAACCAGTCAATGCACT +
Preference number: 4 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTIIKTP*QTSQCT
Trigger: AGTGCATTGACTGGTTTGCCATGGAGTCTTTATAAT...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGATGCCAGAATCCTCCTaGATGTCTTTGTTTAGTACA +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLMPESS*MSLFST
Trigger: TGTACTAAACAAAGACATCCAGGAGGATTCTGGCAT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGACAATTTACCTCCAATaGGATCATATCTACCACGTG +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLTIYLQ*DHIYHV
Trigger: CACGTGGTAGATATGATCCCATTGGAGGTAAATTGT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CCA 90 bp ATTAAAGCAGAATATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGAGCAAAAGACTTTATaGTCAGATACCAAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: IKAEYKSLAFPSFLANASEQKTL*SDTKGV
Trigger: TACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTC...TGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGAACTCCGGTGGTACATaGGTTGTTGTTTTATATATC +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLNSGGT*VVVLYI
Trigger: GATATATAAAACAACAACTCATGTACCACCGGAGTT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp ATTAAAGCAGAATATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAAACTCCGGTGGTACATaGGTTGTTGTTTTATATATC +
Preference number: 4 (lower is better)
Translates to: IKAEYKSLAFPSFLANASNSGGT*VVVLYI
Trigger: GATATATAAAACAACAACTCATGTACCACCGGAGTT...TGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp CACAGGCAACAAAATACACTGAGTCACAACAAATTTCTTGATTGCATCTTTCATCCAAAGTCTGTTGATTaGAGCCATGTTTTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: HRQQNTLSHNKFLDCIFHPKSVD*SHVFLL
Trigger: TAGAAGAAAAACATGGCTTCAATCAACAGACTTTGG...ATGAAAGATGCAATCAAGAAATTTGTTGTGACTCAGTGTATTTTGTTGCCTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR TCA 90 bp ATTAAAGCAGAATATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAAACTTCAAAGCACTATaGGAAACTCTTGATCACTGT +
Preference number: 4 (lower is better)
Translates to: IKAEYKSLAFPSFLANASNFKAL*ETLDHC
Trigger: ACAGTGATCAAGAGTTTCTCATAGTGCTTTGAAGTT...TGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR TCA 90 bp TTTCTTCTATCACAAAAGTATTATAAAGACTCCATGGCAAACCAGTCAATGCACAACTTCAAAGCACTATaGGAAACTCTTGATCACTGT +
Preference number: 4 (lower is better)
Translates to: FLLSQKYYKDSMANQSMHNFKAL*ETLDHC
Trigger: ACAGTGATCAAGAGTTTCTCATAGTGCTTTGAAGTT...GTGCATTGACTGGTTTGCCATGGAGTCTTTATAATACTTTTGTGATAGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR GCA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTAAGTTTCTTGGCAAATaGATCAGCTTGAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTKFLGK*ISLKLK
Trigger: TTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTT...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTTTATCTCAAACACCTCACATaGAGATTCCATATAAGTATA +
Preference number: 4 (lower is better)
Translates to: LYFHVKTSPKCQRSKRLYLKHLT*RFHISI
Trigger: TATACTTATATGGAATCTGCATGTGAGGTGTTTGAG...ATAAAGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTCGCTTGTCCACTTTGGAATAAATaGCCAGAAGGTAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: CLVQSTLLVECQTKLFACPLWNK*PEGNKH
Trigger: ATGCTTATTACCTTCTGGGCATTTATTCCAAAGTGG...ACAAGCGAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACTAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGATCATAAAAACCAAATaGAGCAAAAAGCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLIIKTK*SKKLLS
Trigger: CGAAAGGAGCTTTTTGCTGCATTTGGTTTTTATGAT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTCGCTTGTATCATAAAAACCAAATaGAGCAAAAAGCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: CLVQSTLLVECQTKLFACIIKTK*SKKLLS
Trigger: CGAAAGGAGCTTTTTGCTGCATTTGGTTTTTATGAT...ACAAGCGAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACTAAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR GCA 90 bp TGTTTAGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTCGCTTGTCTCAAACACCTCACATaGAGATTCCATATAAGTATA +
Preference number: 4 (lower is better)
Translates to: CLVQSTLLVECQTKLFACLKHLT*RFHISI
Trigger: TATACTTATATGGAATCTGCATGTGAGGTGTTTGAG...ACAAGCGAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACTAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS GCA 90 bp TCCCCATGGCCACCCGGTTCCGCCGGCTCCTTCAGCGTGCACCGGTaGCACACCGACACTCGTCCCTTCAGAGCGTCCCCGCGGTGTCAC +
Preference number: 5 (lower is better)
Translates to: SPWPPGSAGSFSVHR*HTDTRPFRASPRCH
Trigger: GTGACACCGCGGGGACGCTCTGAAGGGACGAGTGTCGGTGTGGCACCGGTGCACGCTGAAGGAGCCGGCGGAACCGGGTGGCCATGGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS GCA 90 bp TGCCCACATCCCCATGGCCACCCGGTTCCGCCGGCTCCTTCAGCGTaGACCGGTGCCACACCGACACTCGTCCCTTCAGAGCGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: CPHPHGHPVPPAPSA*TGATPTLVPSERPR
Trigger: GCGGGGACGCTCTGAAGGGACGAGTGTCGGTGTGGCACCGGTGCACGCTGAAGGAGCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS CCA 90 bp CGGCCGGCATCTCCCACAAAGCGTCCAGCGATGCCCACATCCCCATaGCCACCCGGTTCCGCCGGCTCCTTCAGCGTGCACCGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: RPASPTKRPAMPTSP*PPGSAGSFSVHRCH
Trigger: GTGGCACCGGTGCACGCTGAAGGAGCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTGTGGGAGATGCCGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS GCA 90 bp GAAGATACGCTTCTCGGCCGGCATCTCCCACAAAGCGTCCAGCGATaGCCACATCCCCATGGCCACCCGGTTCCGCCGGCTCCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: EDTLLGRHLPQSVQR*PHPHGHPVPPAPSA
Trigger: CGCTGAAGGAGCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTGTGGGAGATGCCGGCCGAGAAGCGTATCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372759.4
ENST00000472583.1
ENST00000479131.5
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTGGCAAATGCATCAGCTaGAAACTCAAATCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFGKCIS*KLKSAA
Trigger: AGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCC...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS CCA 90 bp GATGAGGAGCGTAGTGGCAGGCCATCGGAAGTTGACAATGACCAATaGAGAGCAATCATCGGAGCTGATCCCCTTACAACTACACAAGAA +
Preference number: 5 (lower is better)
Translates to: DEERSGRPSEVDNDQ*RAIIGADPLTTTQE
Trigger: TTCTTGTGTAGTTGTAAGGGGATCAGCTCCGATGATTGCTCTCCATTGGTCATTGTCAACTTCCGATGGCCTGCCACTACGCTCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS-3UTR CAA 90 bp CCCAACTTCCAGTGCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTCCTCCTGGATGTCTTaGTTTAGTACAGAGTACTCT +
Preference number: 5 (lower is better)
Translates to: PNFQCPSSWPSTASTSSFSSWMS*FSTEYS
Trigger: AGAGTACTCTGTACTAAACAAAGACATCCAGGAGGA...AAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGCACTGGAAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCATTCCCTTCTTCCTCATaGCGGGGTTCCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSFPSSS*RGSMPE
Trigger: TTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGAA...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp TTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACAGAATTCCCTTCTTCCTCATaGCGGGGTTCCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: FKLGVSTMIQDHCFHLTEFPSSS*RGSMPE
Trigger: TTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGAA...TTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS CCA 90 bp AAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCAGCGCAGTGGTaGTTCAAGAAGTTTGCAAAGGAGATGAGAGCCTTGAAGATGAGG +
Preference number: 5 (lower is better)
Translates to: KISIAVGRAFRSAQW*FKKFAKEMRALKMR
Trigger: CCTCATCTTCAAGGCTCTCATCTCCTTTGCAAACTTCTTGAACCACCACTGCGCTGATCTAAACGCTCTTCCCACAGCAATGCTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS-3UTR CAA 90 bp CAGCATGAAAGTAAGACCAGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGATTCCCTTCTTCCTCATaGCGGGGTTCCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: QHESKTRFQVRCEHNDSGFPSSS*RGSMPE
Trigger: TTCTGGCATGGAACCCCGCAATGAGGAAGAAGGGAA...TCCTGAATCATTGTGCTCACACCTAACTTGAAATCTGGTCTTACTTTCATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGGCAAATGCATCAGCTaGAAACTCAAATCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVGKCIS*KLKSAA
Trigger: AGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCC...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp GTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTACGGTCGTTTGGCATTaGAAGCAAACTTCCACAACA +
Preference number: 5 (lower is better)
Translates to: VVMLPLSNICPQTPHMQITVVWH*KQTSTT
Trigger: TGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGT...AATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CCA 90 bp CAAGAAGTTGCCGAAGAACTCAATGTCGACCATTCTACGGTCGTTTaGCATTTGAAGCAAACTTCCACAACATACACCTTCGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: QEVAEELNVDHSTVV*HLKQTSTTYTFVKG
Trigger: TCCTTTGACGAAGGTGTATGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATGGTCGACATTGAGTTCTTCGGCAACTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS-3UTR CAA 90 bp GCCCCAGTTCATGGCCTAGTACAGCGAGTACCTCCTCATTTTTACATCCTTGTTCCGGTGGTACATGAGTaGTTGTTTTATATATCCTTC +
Preference number: 5 (lower is better)
Translates to: APVHGLVQRVPPHFYILVPVVHE*LFYISF
Trigger: GAAGGATATATAAAACAACAACTCATGTACCACCGG...AACAAGGATGTAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGGAACCCCAAAGTCTGTaGATTGAAGCCATGTTTTTC +
Preference number: 5 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMEPQSL*IEAMFF
Trigger: GAAAAACATGGCTTCAATCAACAGACTTTGGGGTTC...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp AGAAAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCGGCAGAGGTGTGAATTaGTCAAATAAAGGGGCAATA +
Preference number: 5 (lower is better)
Translates to: RKDSCGDAPSFKHMPSNTGRGVN*SNKGAI
Trigger: TATTGCCCCTTTATTTGACAAATTCACACCTCTGCC...GGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp AAGGATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCATCCTCCTGGATGTCTTaGTTTAGTACAGAGTACTCT +
Preference number: 5 (lower is better)
Translates to: KDSCGDAPSFKHMPSNTSSSWMS*FSTEYS
Trigger: AGAGTACTCTGTACTAAACAAAGACATCCAGGAGGA...TGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp GGAAGAGCGTTTAGATCCTTCCACAACATACACCTTCGTCAAAGGAAAGTCAATGGCAAATGCATCAGCTaGAAACTCAAATCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: GRAFRSFHNIHLRQRKVNGKCIS*KLKSAA
Trigger: AGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCC...ATTGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CAA 90 bp CAGCATGAAAGTAAGACCAGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGAAAGGAGATGAGAGCCTaGAAGATGAGGAGCGTAGTG +
Preference number: 5 (lower is better)
Translates to: QHESKTRFQVRCEHNDSGKEMRA*KMRSVV
Trigger: CACTACGCTCCTCATCTTCAAGGCTCTCATCTCCTT...TCCTGAATCATTGTGCTCACACCTAACTTGAAATCTGGTCTTACTTTCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS TCA 90 bp TTGCCGAAGAACTCAATGTCGACCATTCTACGGTCGTTTGGCATTTaGAGCAAACTTCCACAACATACACCTTCGTCAAAGGAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: LPKNSMSTILRSFGI*SKLPQHTPSSKESQ
Trigger: TTGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATGGTCGACATTGAGTTCTTCGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CCA 90 bp ATAAAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCAGCGCAGTaGTGGTTCAAGAAGTTTGCAAAGGAGATGAGAGCCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: IKISIAVGRAFRSAQ*WFKKFAKEMRALKM
Trigger: CATCTTCAAGGCTCTCATCTCCTTTGCAAACTTCTTGAACCACCACTGCGCTGATCTAAACGCTCTTCCCACAGCAATGCTTATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS-3UTR CAA 90 bp CACAATGATTCAGGACCACTGTTTCCACCTCACAGAAAGGATTCCTGTGGTGATCCGGTGGTACATGAGTaGTTGTTTTATATATCCTTC +
Preference number: 5 (lower is better)
Translates to: HNDSGPLFPPHRKDSCGDPVVHE*LFYISF
Trigger: GAAGGATATATAAAACAACAACTCATGTACCACCGG...ATCACCACAGGAATCCTTTCTGTGAGGTGGAAACAGTGGTCCTGAATCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGGCAGAGGTGTGAATTaGTCAAATAAAGGGGCAATA +
Preference number: 5 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLGRGVN*SNKGAI
Trigger: TATTGCCCCTTTATTTGACAAATTCACACCTCTGCC...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTTCCTCCTGGATGTCTTaGTTTAGTACAGAGTACTCT +
Preference number: 5 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVSSWMS*FSTEYS
Trigger: AGAGTACTCTGTACTAAACAAAGACATCCAGGAGGA...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp GTCCAAAGCCAGCATAACCACAGAACCGTCCAGAAAGTCTCCAGAGATAAGGTATCCAATAAGAGTGGGTaGGCTATCATAAAAACCAAA +
Preference number: 5 (lower is better)
Translates to: VQSQHNHRTVQKVSRDKVSNKSG*AIIKTK
Trigger: TTTGGTTTTTATGATAGCCAACCCACTCTTATTGGA...TACCTTATCTCTGGAGACTTTCTGGACGGTTCTGTGGTTATGCTGGCTTTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CAA 90 bp CAGCATGAAAGTAAGACCAGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGAGGCAAATGCATCAGCTaGAAACTCAAATCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: QHESKTRFQVRCEHNDSGGKCIS*KLKSAA
Trigger: AGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCC...TCCTGAATCATTGTGCTCACACCTAACTTGAAATCTGGTCTTACTTTCATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp ATTCCTGTGGTGATGCTCCCTCTTTCAAACATATGCCCTCAAACACCTCACATGGAGAATAATGCCACATaGAGAACAACCAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: IPVVMLPLSNICPQTPHMENNAT*RTTSQK
Trigger: TTTCTGACTGGTTGTTCTCAATGTGGCATTATTCTC...CATGTGAGGTGTTTGAGGGCATATGTTTGAAAGAGGGAGCATCACCACAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp AGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGACCACTGTTTCCACCTCACCTGGACATCTCAGTGTaGCTTCATAGTTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: RFQVRCEHNDSGPLFPPHLDISV*LHSFQS
Trigger: GCTTTGAAAACTATGAAGCAACACTGAGATGTCCAG...GTGAGGTGGAAACAGTGGTCCTGAATCATTGTGCTCACACCTAACTTGAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTCTGGACATCTCAGTGTaGCTTCATAGTTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVLDISV*LHSFQS
Trigger: GCTTTGAAAACTATGAAGCAACACTGAGATGTCCAG...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS TCA 90 bp TCAAATGTTTCAGAATCCATGATCTGTCCTAACTCCGGTGGTACATaGGTTGTTGTTTTATATATCCTTCTCTGCCGCTGTGCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: SNVSESMICPNSGGT*VVVLYILLCRCARK
Trigger: CTTCCTAGCACAGCGGCAGAGAAGGATATATAAAACAACAACTCATGTACCACCGGAGTTAGGACAGATCATGGATTCTGAAACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS TCA 90 bp TCTGGAAAGTGCCTTCAGTCTCTGAATAGAGTCCTGACCAGAAGCTaGAAGTGCTTTTATCCAGTTGATAGAGTCGAGATTTCTCAAATG +
Preference number: 5 (lower is better)
Translates to: SGKCLQSLNRVLTRS*KCFYPVDRVEISQM
Trigger: CATTTGAGAAATCTCGACTCTATCAACTGGATAAAAGCACTTTCAGCTTCTGGTCAGGACTCTATTCAGAGACTGAAGGCACTTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479131.5
ENST00000674703.1
CDS-3UTR CAA 90 bp CCAAATGTCAGCGGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTCCGGTGGTACATGAGTaGTTGTTTTATATATCCTTC +
Preference number: 5 (lower is better)
Translates to: PNVSGAKDFMVRYQRRTVPVVHE*LFYISF
Trigger: GAAGGATATATAAAACAACAACTCATGTACCACCGG...AACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGCTGACATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp CAAATGCATCAGCTTGAAACTCAAATCTGCGGCTTAGGACTGTTAGGCAAAAAGTCCTCCTGGATGTCTTaGTTTAGTACAGAGTACTCT +
Preference number: 5 (lower is better)
Translates to: QMHQLETQICGLGLLGKKSSWMS*FSTEYS
Trigger: AGAGTACTCTGTACTAAACAAAGACATCCAGGAGGA...CTTTTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp GGAGCAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAGAATAATGCCACATaGAGAACAACCAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: GAKDFMVRYQRRTVDPTLENNAT*RTTSQK
Trigger: TTTCTGACTGGTTGTTCTCAATGTGGCATTATTCTC...CAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp TTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTGAAACTCAAATCTGCGCTGGACATCTCAGTGTaGCTTCATAGTTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: FSLPKFLGKCISLKLKSALDISV*LHSFQS
Trigger: GCTTTGAAAACTATGAAGCAACACTGAGATGTCCAG...CGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp GAAGCCATAAAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACACCAAAGGCGTACAGTaGATCCCACTTTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: EAIKISIAVGRAFRSFHNTKGVQ*IPLWNK
Trigger: TTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGT...GTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTTTATGGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CAA 90 bp GGAAGAGCGTTTAGATCCTTCCACAACATACACCTTCGTCAAAGGAAAGTCAATACCAAAGGCGTACAGTaGATCCCACTTTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: GRAFRSFHNIHLRQRKVNTKGVQ*IPLWNK
Trigger: TTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGT...ATTGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CAA 90 bp AAAATAAGCATTGCTGTGGGAAGAGCGTTTAGATCCTTCCACAACATACACCTTGGCAGAGGTGTGAATTaGTCAAATAAAGGGGCAATA +
Preference number: 5 (lower is better)
Translates to: KISIAVGRAFRSFHNIHLGRGVN*SNKGAI
Trigger: TATTGCCCCTTTATTTGACAAATTCACACCTCTGCC...AAGGTGTATGTTGTGGAAGGATCTAAACGCTCTTCCCACAGCAATGCTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CAA 90 bp ACTGAAAAGTGTAGCCAACAGCAGAAACACCAGGGACTGAGTGATCTCATATTCTCCAATAAGAGTGGGTaGGCTATCATAAAAACCAAA +
Preference number: 5 (lower is better)
Translates to: TEKCSQQQKHQGLSDLIFSNKSG*AIIKTK
Trigger: TTTGGTTTTTATGATAGCCAACCCACTCTTATTGGA...GAATATGAGATCACTCAGTCCCTGGTGTTTCTGCTGTTGGCTACACTTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675754.1
CDS-3UTR CAA 90 bp CAAAAGACTTTATGGTCAGATACCAAAGGCGTACAGTTGATCCCACTTTGGAATACCAAAGGCGTACAGTaGATCCCACTTTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: QKTLWSDTKGVQLIPLWNTKGVQ*IPLWNK
Trigger: TTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGT...ATTCCAAAGTGGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp TTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCAGCTTGAAACTCAAATCTGCGTCCAATAAGAGTGGGTaGGCTATCATAAAAACCAAA +
Preference number: 5 (lower is better)
Translates to: FSLPKFLGKCISLKLKSASNKSG*AIIKTK
Trigger: TTTGGTTTTTATGATAGCCAACCCACTCTTATTGGA...CGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp CAGCATGAAAGTAAGACCAGATTTCAAGTTAGGTGTGAGCACAATGATTCAGGAGAGAATAATGCCACATaGAGAACAACCAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: QHESKTRFQVRCEHNDSGENNAT*RTTSQK
Trigger: TTTCTGACTGGTTGTTCTCAATGTGGCATTATTCTC...TCCTGAATCATTGTGCTCACACCTAACTTGAAATCTGGTCTTACTTTCATGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTGGCAGAGGTGTGAATTaGTCAAATAAAGGGGCAATA +
Preference number: 5 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTGRGVN*SNKGAI
Trigger: TATTGCCCCTTTATTTGACAAATTCACACCTCTGCC...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp ATTAAAGCAGAATATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCACAACTACACAAGAAGTaGCCGAAGAACTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: IKAEYKSLAFPSFLANASQLHKK*PKNSMS
Trigger: CGACATTGAGTTCTTCGGCAACTTCTTGTGTAGTTG...TGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS-3UTR CAA 90 bp TTTATTATATTTCCATGTGAAGACATCACCCAAATGTCAGCGGAGCAAAAGACTCCGGTGGTACATGAGTaGTTGTTTTATATATCCTTC +
Preference number: 5 (lower is better)
Translates to: FIIFPCEDITQMSAEQKTPVVHE*LFYISF
Trigger: GAAGGATATATAAAACAACAACTCATGTACCACCGG...AGTCTTTTGCTCCGCTGACATTTGGGTGATGTCTTCACATGGAAATATAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp CTTTCAAACATATGCCCTCAAACACCTCACATGCAGATTCCATATAAGTATACAGAGAATAATGCCACATaGAGAACAACCAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LSNICPQTPHMQIPYKYTENNAT*RTTSQK
Trigger: TTTCTGACTGGTTGTTCTCAATGTGGCATTATTCTC...TGTATACTTATATGGAATCTGCATGTGAGGTGTTTGAGGGCATATGTTTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp ATTAAAGCAGAATATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAATGCATCACTGGACATCTCAGTGTaGCTTCATAGTTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: IKAEYKSLAFPSFLANASLDISV*LHSFQS
Trigger: GCTTTGAAAACTATGAAGCAACACTGAGATGTCCAG...TGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGACCAAAGGCGTACAGTaGATCCCACTTTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLTKGVQ*IPLWNK
Trigger: TTTATTCCAAAGTGGGATCAACTGTACGCCTTTGGT...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS TCA 90 bp TATCCAGTTGATAGAGTCGAGATTTCTCAAATGTTTCAGAATCCATaGTCTGTCCTAACTCCGGTGGTACATGAGTTGTTGTTTTATATA +
Preference number: 5 (lower is better)
Translates to: YPVDRVEISQMFQNP*SVLTPVVHELLFYI
Trigger: TATATAAAACAACAACTCATGTACCACCGGAGTTAGGACAGATCATGGATTCTGAAACATTTGAGAAATCTCGACTCTATCAACTGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372759.4
ENST00000472583.1
ENST00000479131.5
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS-3UTR CAA 90 bp AAAACGTGTTTAATATGGCCATCTCTGCTGAGTGAAAGGATGTATTATTTACTGGGTAGTGTTGTTAAGTaGTTCAACAATTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: KTCLIWPSLLSERMYYLLGSVVK*FNNSLE
Trigger: TTCCAGAGAATTGTTGAACAACTTAACAACACTACC...CAGTAAATAATACATCCTTTCACTCAGCAGAGATGGCCATATTAAACACGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674703.1
CDS GCA 72 bp CCACCCGGTTCCGCCGGCTCCTTCAGCGTGCACCGGTaGCACACCGACACTCGTCCCTTCAGAGCGTCCCCG +
Preference number: 6 (lower is better)
Translates to: PPGSAGSFSVHR*HTDTRPFRASP
Trigger: CGGGGACGCTCTGAAGGGACGAGTGTCGGTGTGGCACCGGTGCACGCTGAAGGAGCCGGCGGAACCGGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS GCA 72 bp CCCCATGGCCACCCGGTTCCGCCGGCTCCTTCAGCGTaGACCGGTGCCACACCGACACTCGTCCCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: PHGHPVPPAPSA*TGATPTLVPSE
Trigger: CTCTGAAGGGACGAGTGTCGGTGTGGCACCGGTGCACGCTGAAGGAGCCGGCGGAACCGGGTGGCCATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674703.1
ENST00000675937.1
CDS GCA 72 bp CTTCTCGGCCGGCATCTCCCACAAAGCGTCCAGCGATaGCCACATCCCCATGGCCACCCGGTTCCGCCGGCT +
Preference number: 6 (lower is better)
Translates to: LLGRHLPQSVQR*PHPHGHPVPPA
Trigger: AGCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTGTGGGAGATGCCGGCCGAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372759.4
ENST00000472583.1
ENST00000479131.5
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS CCA 72 bp TCTCCCACAAAGCGTCCAGCGATGCCCACATCCCCATaGCCACCCGGTTCCGCCGGCTCCTTCAGCGTGCAC +
Preference number: 6 (lower is better)
Translates to: SPTKRPAMPTSP*PPGSAGSFSVH
Trigger: GTGCACGCTGAAGGAGCCGGCGGAACCGGGTGGCCATGGGGATGTGGGCATCGCTGGACGCTTTGTGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372759.4
ENST00000479131.5
ENST00000674703.1
ENST00000675937.1
CDS CCA 72 bp CGTAGTGGCAGGCCATCGGAAGTTGACAATGACCAATaGAGAGCAATCATCGGAGCTGATCCCCTTACAACT +
Preference number: 6 (lower is better)
Translates to: RSGRPSEVDNDQ*RAIIGADPLTT
Trigger: AGTTGTAAGGGGATCAGCTCCGATGATTGCTCTCCATTGGTCATTGTCAACTTCCGATGGCCTGCCACTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CAA 72 bp TTGAAGATGAGGAGCGTAGTGGCAGGCCATCGGAAGTaGACAATGACCAATGGAGAGCAATCATCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LKMRSVVAGHRK*TMTNGEQSSEL
Trigger: CAGCTCCGATGATTGCTCTCCATTGGTCATTGTCAACTTCCGATGGCCTGCCACTACGCTCCTCATCTTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CCA 72 bp AGCATTGCTGTGGGAAGAGCGTTTAGATCAGCGCAGTaGTGGTTCAAGAAGTTTGCAAAGGAGATGAGAGCC +
Preference number: 6 (lower is better)
Translates to: SIAVGRAFRSAQ*WFKKFAKEMRA
Trigger: GGCTCTCATCTCCTTTGCAAACTTCTTGAACCACCACTGCGCTGATCTAAACGCTCTTCCCACAGCAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CCA 72 bp ATTGCTGTGGGAAGAGCGTTTAGATCAGCGCAGTGGTaGTTCAAGAAGTTTGCAAAGGAGATGAGAGCCTTG +
Preference number: 6 (lower is better)
Translates to: IAVGRAFRSAQW*FKKFAKEMRAL
Trigger: CAAGGCTCTCATCTCCTTTGCAAACTTCTTGAACCACCACTGCGCTGATCTAAACGCTCTTCCCACAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CAA 72 bp TCATCGGAGCTGATCCCCTTACAACTACACAAGAAGTaGCCGAAGAACTCAATGTCGACCATTCTACGGTCG +
Preference number: 6 (lower is better)
Translates to: SSELIPLQLHKK*PKNSMSTILRS
Trigger: CGACCGTAGAATGGTCGACATTGAGTTCTTCGGCAACTTCTTGTGTAGTTGTAAGGGGATCAGCTCCGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CAA 90 bp GGAGAGCAATCATCGGAGCTGATCCCCTTACAACTACACAAGAAGTaGCCGAAGAACTCAATGTCGACCATTCTACGGTCGTTTGGCATT +
Preference number: 6 (lower is better)
Translates to: GEQSSELIPLQLHKK*PKNSMSTILRSFGI
Trigger: AATGCCAAACGACCGTAGAATGGTCGACATTGAGTTCTTCGGCAACTTCTTGTGTAGTTGTAAGGGGATCAGCTCCGATGATTGCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CCA 72 bp GCCGAAGAACTCAATGTCGACCATTCTACGGTCGTTTaGCATTTGAAGCAAACTTCCACAACATACACCTTC +
Preference number: 6 (lower is better)
Translates to: AEELNVDHSTVV*HLKQTSTTYTF
Trigger: GAAGGTGTATGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATGGTCGACATTGAGTTCTTCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CAA 90 bp GTTGCCGAAGAACTCAATGTCGACCATTCTACGGTCGTTTGGCATTaGAAGCAAACTTCCACAACATACACCTTCGTCAAAGGAAAGTCA +
Preference number: 6 (lower is better)
Translates to: VAEELNVDHSTVVWH*KQTSTTYTFVKGKS
Trigger: TGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATGGTCGACATTGAGTTCTTCGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CAA 90 bp ACAAGAAGTTGCCGAAGAACTCAATGTCGACCATTCTACGGTCGTTaGGCATTTGAAGCAAACTTCCACAACATACACCTTCGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: TRSCRRTQCRPFYGR*AFEANFHNIHLRQR
Trigger: CCTTTGACGAAGGTGTATGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATGGTCGACATTGAGTTCTTCGGCAACTTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS TCA 72 bp TGCCTTCAGTCTCTGAATAGAGTCCTGACCAGAAGCTaGAAGTGCTTTTATCCAGTTGATAGAGTCGAGATT +
Preference number: 6 (lower is better)
Translates to: CLQSLNRVLTRS*KCFYPVDRVEI
Trigger: AATCTCGACTCTATCAACTGGATAAAAGCACTTTCAGCTTCTGGTCAGGACTCTATTCAGAGACTGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372759.4
ENST00000472583.1
ENST00000479131.5
ENST00000674703.1
ENST00000675754.1
ENST00000675937.1
CDS TCA 72 bp AACTCAATGTCGACCATTCTACGGTCGTTTGGCATTTaGAGCAAACTTCCACAACATACACCTTCGTCAAAG +
Preference number: 6 (lower is better)
Translates to: NSMSTILRSFGI*SKLPQHTPSSK
Trigger: CTTTGACGAAGGTGTATGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATGGTCGACATTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1
CDS CAA 72 bp GAACTCAATGTCGACCATTCTACGGTCGTTTGGCATTaGAAGCAAACTTCCACAACATACACCTTCGTCAAA +
Preference number: 6 (lower is better)
Translates to: ELNVDHSTVVWH*KQTSTTYTFVK
Trigger: TTTGACGAAGGTGTATGTTGTGGAAGTTTGCTTCAAATGCCAAACGACCGTAGAATGGTCGACATTGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675937.1