RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMIZ2 (Homo sapiens)

Ensembl gene IDs: ENSG00000122515

Ensembl transcript IDs: ENST00000265346.11, ENST00000309315.9, ENST00000413916.5, ENST00000416856.5, ENST00000433667.5, ENST00000441627.5, ENST00000457123.5, ENST00000463056.5, ENST00000463931.1, ENST00000478045.5, ENST00000480964.5, ENST00000482322.1, ENST00000492001.1, ENST00000492558.1, ENST00000615423.1

Found 1065 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAAGGGCTGCCGGCCTGGGAGCCCCTCCCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: GKGCRPGSPSHRAQG*FQFRGRAGGRRLWL
Trigger: GAGCCAGAGCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGGGCTCCCAGGCCGGCAGCCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CCA 90 bp TGCAGCAGCAGGCTTGGCAGAGGGAGGTGGCAAGGGCTGCCGGCCTaGGAGCCCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGG +
Preference number: 1 (lower is better)
Translates to: CSSRLGRGRWQGLPA*EPLPSSTGLLPIQG
Trigger: CCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGGGCTCCCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAGCCTGCTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR GCA 90 bp AAGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGAGGGAGGTGGCAAGGGCTGCCGGCC +
Preference number: 1 (lower is better)
Translates to: KAGQGWAGAPQQKPF*SSRLGRGRWQGLPA
Trigger: GGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR TCA 90 bp GCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAAGGAGCAGAGCGCGCAGGGAGACCG +
Preference number: 1 (lower is better)
Translates to: ARPKLTVPHPLEVPP*SVCTWEGAERAGRP
Trigger: CGGTCTCCCTGCGCGCTCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CCA 90 bp GCCTCCCAGGGACAAGAGCTGAGAAGGATGAGCCCCTGGCTGGGCTaGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: ASQGQELRRMSPWLG*GCQTTVSVPQGKPR
Trigger: TCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGCCCAGCCAGGGGCTCATCCTTCTCAGCTCTTGTCCCTGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 90 bp ACCCAAGAAAGGAGGGCCTGGGGCCTGCATCAGGCCATGGCTGAGTaGGACTTTGCCAGGCTGTCTCCGCACCCAGCGACAGGACTGTGC +
Preference number: 1 (lower is better)
Translates to: TQERRAWGLHQAMAE*DFARLSPHPATGLC
Trigger: GCACAGTCCTGTCGCTGGGTGCGGAGACAGCCTGGCAAAGTCCCACTCAGCCATGGCCTGATGCAGGCCCCAGGCCCTCCTTTCTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 90 bp ACCCACCCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTaGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGC +
Preference number: 1 (lower is better)
Translates to: THPPRPGRSSLSPTH*RFLPDLSAHGKEQS
Trigger: GCTCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR GCA 90 bp AAGCCACTTGAAGGTCGACCTGGCCCCCAGGTCCTGCACAAGCTTTaGAGGCACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGA +
Preference number: 1 (lower is better)
Translates to: KPLEGRPGPQVLHKL*RHSPSFRQVAGLRG
Trigger: TCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGGTCGACCTTCAAGTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR GCA 90 bp GAGTGGGACTTTGCCAGGCTGTCTCCGCACCCAGCGACAGGACTGTaGGTGCTGCTGCTTCTTTTGTTTCCTCCACTTCTGTTCCCTCAT +
Preference number: 1 (lower is better)
Translates to: EWDFARLSPHPATGL*VLLLLLFPPLLFPH
Trigger: ATGAGGGAACAGAAGTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAGACAGCCTGGCAAAGTCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 90 bp AAGCTGGACAGGCAGATGGTAGGCAGGACACACCTCTGCAATCTCTaGGAAGTGACAAGCAGAGGCCTCCCAGGGACAAGAGCTGAGAAG +
Preference number: 1 (lower is better)
Translates to: KLDRQMVGRTHLCNL*EVTSRGLPGTRAEK
Trigger: CTTCTCAGCTCTTGTCCCTGGGAGGCCTCTGCTTGTCACTTCCCAGAGATTGCAGAGGTGTGTCCTGCCTACCATCTGCCTGTCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR GCA 90 bp CACTCCATCCGGGAGCATCACGTTTGCAACAGGCAGGGCAGGTGGTaGATCAGATGTCCAGGACACAGTCATTTGACACCCAAGAAAGGA +
Preference number: 1 (lower is better)
Translates to: HSIREHHVCNRQGRW*IRCPGHSHLTPKKG
Trigger: TCCTTTCTTGGGTGTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGGATGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 90 bp CTCCACTCCATCCGGGAGCATCACGTTTGCAACAGGCAGGGCAGGTaGTGCATCAGATGTCCAGGACACAGTCATTTGACACCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: LHSIREHHVCNRQGR*CIRCPGHSHLTPKK
Trigger: TTTCTTGGGTGTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGGATGGAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR TCA 90 bp AGGGCCACGGTGCCCATGCATTCCTCAATCATTTCTCCAGTCTTCTaGGGATGGGCTTCTGGGTTGTTTGCAGCCTTTTGCTTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: RATVPMHSSIISPVF*GWASGLFAAFCLSQ
Trigger: CTGGGACAAGCAAAAGGCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAATGCATGGGCACCGTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 90 bp TGTTTCCTCCACTTCTGTTCCCTCATCCAGAGAGGGCGGAAGAGCTaGAAACAGAGGCTTTGTCAGGGAATAAGGAAGCCCACCTGTGTG +
Preference number: 1 (lower is better)
Translates to: CFLHFCSLIQRGRKS*KQRLCQGIRKPTCV
Trigger: CACACAGGTGGGCTTCCTTATTCCCTGACAAAGCCTCTGTTTCCAGCTCTTCCGCCCTCTCTGGATGAGGGAACAGAAGTGGAGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR TCA 90 bp AACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGAGGTGTTTGTaGTGGAGCACAGGGCCACGGTGCCCATGCATTCCTCAATCATTT +
Preference number: 1 (lower is better)
Translates to: NCLAFSSHVVSERCL*WSTGPRCPCIPQSF
Trigger: AAATGATTGAGGAATGCATGGGCACCGTGGCCCTGTGCTCCATCACAAACACCTCTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR TCA 90 bp ATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTaGGAGGTGTTTGTGATGGAGCACAGGGCCACGGTGCCCATGCAT +
Preference number: 1 (lower is better)
Translates to: IILYELSCFFIPRCF*EVFVMEHRATVPMH
Trigger: ATGCATGGGCACCGTGGCCCTGTGCTCCATCACAAACACCTCTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGACAGCCCAGGCGCCCTaGTCGCACAGGCTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQTAQAP*SHRLGP
Trigger: GGGCCCCAGCCTGTGCGAGCAGGGCGCCTGGGCTGT...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: HRAESESPPTHLGQAEAHLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CAA 90 bp AAAGGAGGGCCTGGGGCCTGCATCAGGCCATGGCTGAGTGGGACTTaGCCAGGCTGTCTCCGCACCCAGCGACAGGACTGTGCGTGCTGC +
Preference number: 2 (lower is better)
Translates to: KGGPGACIRPWLSGT*PGCLRTQRQDCACC
Trigger: GCAGCACGCACAGTCCTGTCGCTGGGTGCGGAGACAGCCTGGCAAAGTCCCACTCAGCCATGGCCTGATGCAGGCCCCAGGCCCTCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGCCAGCCCTGCCAGATaGCCAGCTCTGCCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: HRAESESPPTHLGQAEAHASPAR*PALPSG
Trigger: TCCACTGGGCAGAGCTGGGCATCTGGCAGGGCTGGC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCACACACGGCTGGGCTaGCAGAGCTCCAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: TELNLRAHPPTSARPKLTHTRLG*QSSRPP
Trigger: TGGGGGCCTGGAGCTCTGGCAGCCCAGCCGTGTGTG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACACAGCCCAGGCGCCCTaGTCGCACAGGCTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHTAQAP*SHRLGP
Trigger: GGGCCCCAGCCTGTGCGAGCAGGGCGCCTGGGCTGT...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp CACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGAGGTCAAGGCGGAGCTaGCCCCTGCCACACCAGGCA +
Preference number: 2 (lower is better)
Translates to: HALLHVALVGAAFSKRLLRSRRS*PLPHQA
Trigger: TGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCT...CAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416856.5
3UTR-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: RGCHSARFQELDCWAQGPGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: LHRAESESPPTHLGQAEAGHRGH*SQRPRG
Trigger: TCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCAGGAACATGCTGGCTaGACAGCTGGCTCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPQEHAG*TAGSPL
Trigger: GAGAGGGGAGCCAGCTGTCCAGCCAGCATGTTCCTG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGTCCTCCTCCCCCACCTaGGTGTGGGCCCATGGGGTG +
Preference number: 2 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVSSSPT*VWAHGV
Trigger: CACCCCATGGGCCCACACCCAGGTGGGGGAGGAGGA...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGCACAGGCTGGGGCCCTaGGCCAACAGATGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVHRLGP*ANRCSG
Trigger: GCCACTGCATCTGTTGGCTCAGGGCCCCAGCCTGTG...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACACACACGGCTGGGCTaGCAGAGCTCCAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRHTRLG*QSSRPP
Trigger: TGGGGGCCTGGAGCTCTGGCAGCCCAGCCGTGTGTG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: LHRAESESPPTHLGQAEAGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGCAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 2 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 2 (lower is better)
Translates to: TELNLRAHPPTSARPKLTQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 2 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPCLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: HRAESESPPTHLGQAEAHHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCCAGCCCTGCCAGATaGCCAGCTCTGCCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: SLHRAESESPPTHLGQAEASPAR*PALPSG
Trigger: TCCACTGGGCAGAGCTGGGCATCTGGCAGGGCTGGC...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGCCAGCCCTGCCAGATaGCCAGCTCTGCCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGASPAR*PALPSG
Trigger: TCCACTGGGCAGAGCTGGGCATCTGGCAGGGCTGGC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACAGGCCCCCAAGAGGCTaGCATTCAGCGAGGTTCCAA +
Preference number: 2 (lower is better)
Translates to: HRAESESPPTHLGQAEAHRPPRG*HSARFQ
Trigger: TTGGAACCTCGCTGAATGGCAGCCTCTTGGGGGCCT...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp GCCACAGCTGCAGCAGCTGCCGCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCACCTTCAGCAAACGCCTaGTGTCCCAGGCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: ATAAAAAACVKSVEGLAAPSANA*CPRHCG
Trigger: CCCACAGTGCCTGGGACAGCAGGCGTTTGCTGAAGG...TGCTGCAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
3UTR-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCAGGAACATGCTGGCTaGACAGCTGGCTCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: TELNLRAHPPTSARPKLTQEHAG*TAGSPL
Trigger: GAGAGGGGAGCCAGCTGTCCAGCCAGCATGTTCCTG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPQQKPF*SSRLGR
Trigger: TCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCACACACGGCTGGGCTaGCAGAGCTCCAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ARESLHRAESESPPTHLGHTRLG*QSSRPP
Trigger: TGGGGGCCTGGAGCTCTGGCAGCCCAGCCGTGTGTG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: LHRAESESPPTHLGQAEAGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: SLHRAESESPPTHLGQAEKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCGTGAGATGTGTGTGTaGACAAGGCTGGACAGGGCT +
Preference number: 2 (lower is better)
Translates to: HRAESESPPTHLGQAEAHREMCV*TRLDRA
Trigger: AGCCCTGTCCAGCCTTGTCCACACACACATCTCACG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: ARESLHRAESESPPTHLGGHRGH*SQRPRG
Trigger: TCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: WERSPLENLYTELNLRAHGHRGH*SQRPRG
Trigger: TCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 2 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 2 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 2 (lower is better)
Translates to: TELNLRAHPPTSARPKLTCLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACTCTTGCCTCTCCTGCTaGCTGGCTGGGAAGGCCCTC +
Preference number: 2 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHSCLSC*LAGKAL
Trigger: GAGGGCCTTCCCAGCCAGCCAGCAGGAGAGGCAAGA...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 2 (lower is better)
Translates to: SLHRAESESPPTHLGQAEQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 2 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR TCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTGGAAGGACAAGGTGTaGGGCTGTGAGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRWKDKV*GCETRG
Trigger: GCCCCTGGTCTCACAGCCTCACACCTTGTCCTTCCA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGCCAGCCCTGCCAGATaGCCAGCTCTGCCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: ARESLHRAESESPPTHLGASPAR*PALPSG
Trigger: TCCACTGGGCAGAGCTGGGCATCTGGCAGGGCTGGC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 2 (lower is better)
Translates to: LHRAESESPPTHLGQAEACLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CAA 90 bp AACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTaGACACCCAAGAAAGGAGGGCCTGGGGCCTGCATCAGGCCATGG +
Preference number: 2 (lower is better)
Translates to: NRQGRWCIRCPGHSH*TPKKGGPGACIRPW
Trigger: CCATGGCCTGATGCAGGCCCCAGGCCCTCCTTTCTTGGGTGTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCCAGATGCCCAGCTCTaGCCAGTGGAGGAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRPDAQL*PVEELL
Trigger: CAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACCAGATGCCCAGCTCTaGCCAGTGGAGGAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRPDAQL*PVEELL
Trigger: CAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: KGNLGAQPARESLHRAESLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCAGAAGGATCAATGCTaGACAAGAAGCAGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: HRAESESPPTHLGQAEAHQKDQC*TRSRLG
Trigger: ACCCAGCCTGCTTCTTGTCCAGCATTGATCCTTCTG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGCAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 2 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: ARESLHRAESESPPTHLGGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCGTGAGATGTGTGTGTaGACAAGGCTGGACAGGGCT +
Preference number: 2 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRREMCV*TRLDRA
Trigger: AGCCCTGTCCAGCCTTGTCCACACACACATCTCACG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACGTGAGATGTGTGTGTaGACAAGGCTGGACAGGGCT +
Preference number: 2 (lower is better)
Translates to: SLHRAESESPPTHLGQAEREMCV*TRLDRA
Trigger: AGCCCTGTCCAGCCTTGTCCACACACACATCTCACG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACAGAAGGATCAATGCTaGACAAGAAGCAGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: RGCHSARFQELDCWAQGPQKDQC*TRSRLG
Trigger: ACCCAGCCTGCTTCTTGTCCAGCATTGATCCTTCTG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: KGNLGAQPARESLHRAESDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CAA 90 bp TGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTaGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAG +
Preference number: 2 (lower is better)
Translates to: CPSLLVSPLHPGASR*QQAGQVVHQMSRTQ
Trigger: CTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 2 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAATTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAA +
Preference number: 2 (lower is better)
Translates to: SLHRAESESPPTHLGQAELEVPP*SVCTWE
Trigger: TTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAA...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: WERSPLENLYTELNLRAHHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGQQKPF*SSRLGR
Trigger: TCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SLHRAESESPPTHLGQAEQQKPF*SSRLGR
Trigger: TCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCAGGCCCCCAAGAGGCTaGCATTCAGCGAGGTTCCAA +
Preference number: 2 (lower is better)
Translates to: ARESLHRAESESPPTHLGRPPRG*HSARFQ
Trigger: TTGGAACCTCGCTGAATGGCAGCCTCTTGGGGGCCT...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACAGGCCCCCAAGAGGCTaGCATTCAGCGAGGTTCCAA +
Preference number: 2 (lower is better)
Translates to: WERSPLENLYTELNLRAHRPPRG*HSARFQ
Trigger: TTGGAACCTCGCTGAATGGCAGCCTCTTGGGGGCCT...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCTCCTCCTCCCCCACCTaGGTGTGGGCCCATGGGGTG +
Preference number: 2 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSSSSPT*VWAHGV
Trigger: CACCCCATGGGCCCACACCCAGGTGGGGGAGGAGGA...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACACCTGCTCGCACAGGCTaGGGCCCTGAGCCAACAGAT +
Preference number: 2 (lower is better)
Translates to: LSQSPSFSTPSGSITFATPARTG*GPEPTD
Trigger: ATCTGTTGGCTCAGGGCCCCAGCCTGTGCGAGCAGG...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGGGAATAGCCGAGCCTTaGCTTGAAACATCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVGIAEP*LETSRA
Trigger: AGCTCTGGATGTTTCAAGCCAAGGCTCGGCTATTCC...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: WERSPLENLYTELNLRAHVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: APLSQLLVFLHYVHCCALLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR TCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGCAATCTCTGGGAAGTaGCAAGCAGAGGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: LSQSPSFSTPSGSITFATAISGK*QAEASQ
Trigger: CTGGGAGGCCTCTGCTTGTCACTTCCCAGAGATTGC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: WERSPLENLYTELNLRAHQQKPF*SSRLGR
Trigger: TCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: EKGNLGAQPARESLHRAEVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: WERSPLENLYTELNLRAHAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: APLSQLLVFLHYVHCCALDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 2 (lower is better)
Translates to: KGNLGAQPARESLHRAESCLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 2 (lower is better)
Translates to: SLHRAESESPPTHLGQAEQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAACAGAAGGATCAATaGTGGACAAGAAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGKQKDQ*WTRSRL
Trigger: CAGCCTGCTTCTTGTCCAGCATTGATCCTTCTGTTT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: KGNLGAQPARESLHRAESVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAA +
Preference number: 2 (lower is better)
Translates to: KGNLGAQPARESLHRAESLEVPP*SVCTWE
Trigger: TTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCCCAGATGCCCAGCTCTaGCCAGTGGAGGAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSPDAQL*PVEELL
Trigger: CAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGG...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGTCCTGCACAAGCTTTaGAGGCACAGCCCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: LSQSPSFSTPSGSITFATVLHKL*RHSPSF
Trigger: AAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGAC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCGCTCCCACAGACAGATaGCCTCCTCTAGTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSAPTDR*PPLVPP
Trigger: TGGAGGCACTAGAGGAGGGCATCTGTCTGTGGGAGC...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCGCCTGCATCAGGCCATaGCTGAGTGGGACTTTGCCA +
Preference number: 2 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSACIRP*LSGTLP
Trigger: TGGCAAAGTCCCACTCAGCCATGGCCTGATGCAGGC...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 2 (lower is better)
Translates to: ARESLHRAESESPPTHLGQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR TCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACCAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 2 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCCAGATGCCCAGCTCTaGCCAGTGGAGGAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: APLSQLLVFLHYVHCCALPDAQL*PVEELL
Trigger: CAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGGAATAGCCGAGCCTTaGCTTGAAACATCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: LSQSPSFSTPSGSITFATGIAEP*LETSRA
Trigger: AGCTCTGGATGTTTCAAGCCAAGGCTCGGCTATTCC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 2 (lower is better)
Translates to: EKGNLGAQPARESLHRAEQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAAAACAGAAGGATCAATaGTGGACAAGAAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: EKGNLGAQPARESLHRAEKQKDQ*WTRSRL
Trigger: CAGCCTGCTTCTTGTCCAGCATTGATCCTTCTGTTT...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGCCTCCCTGCAGCCTCTaGGCTCCCACAGACAGATGC +
Preference number: 2 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEPPCSL*APTDRC
Trigger: GCATCTGTCTGTGGGAGCCCAGAGGCTGCAGGGAGG...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CAA 90 bp CCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTaGCAGCCTTTTGCTTGTCCCAGTCTCCTAGTTTCTCCACTCCAT +
Preference number: 2 (lower is better)
Translates to: PQSFLQSSEDGLLGC*QPFACPSLLVSPLH
Trigger: ATGGAGTGGAGAAACTAGGAGACTGGGACAAGCAAAAGGCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGAAACAGAAGGATCAATaGTGGACAAGAAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKKQKDQ*WTRSRL
Trigger: CAGCCTGCTTCTTGTCCAGCATTGATCCTTCTGTTT...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACACAGCTGAAGCCAACTTaGAAAATTCCAGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: LSQSPSFSTPSGSITFATQLKPT*KIPGKR
Trigger: CCTTTTCCCTGGAATTTTCCAAGTTGGCTTCAGCTG...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGCAAGAAAGGAGGGCCTaGGGCCTGCATCAGGCCATG +
Preference number: 2 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEQERRA*GLHQAM
Trigger: CATGGCCTGATGCAGGCCCCAGGCCCTCCTTTCTTG...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR TCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGAGCCGAGCCTTGGCTTaGAACATCCAGAGCTCAACC +
Preference number: 2 (lower is better)
Translates to: MASYCMNCLAFSSHVVSESRALA*NIQSST
Trigger: GGTTGAGCTCTGGATGTTTCAAGCCAAGGCTCGGCT...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR GCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGAAACAACTGTCTCAGTaGCCCAGGGCAAGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEKQLSQ*PRASPD
Trigger: ATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTT...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR GCA 72 bp TGCCGGCCTGGGAGCCCCTCCCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: CRPGSPSHRAQG*FQFRGRAGGRR
Trigger: CCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGGGCTCCCAGGCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CCA 72 bp GGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGACAGAGCCAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: GSKSWTAGHRGH*SQRPRGQSQPC
Trigger: GCAGGGCTGGCTCTGTCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR TCA 72 bp AGAAAGGAGGGCCTGGGGCCTGCATCAGGCCATGGCTaGGTGGGACTTTGCCAGGCTGTCTCCGCACCCAGC +
Preference number: 3 (lower is better)
Translates to: RKEGLGPASGHG*VGLCQAVSAPS
Trigger: GCTGGGTGCGGAGACAGCCTGGCAAAGTCCCACTCAGCCATGGCCTGATGCAGGCCCCAGGCCCTCCTTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 72 bp GAGCCAACAGATGCAGTGGCTTCCTCCTCCCCCACCTaGGTGTGGGCCCATGGGGTGGAGACAGAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: EPTDAVASSSPT*VWAHGVETERW
Trigger: CCACCTCTCTGTCTCCACCCCATGGGCCCACACCCAGGTGGGGGAGGAGGAAGCCACTGCATCTGTTGGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR GCA 72 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTaGTGGGCACAGGGGCCACTGGAGCCAAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: RGCHSARFQELD*WAQGPLEPKAQ
Trigger: CTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CCA 72 bp CCCCAAGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTaGACTGCTGGGCACAGGGGCCACTGGAGCCAAAGG +
Preference number: 3 (lower is better)
Translates to: PQEAAIQRGSKS*TAGHRGHWSQR
Trigger: CCTTTGGCTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR GCA 72 bp AACGCTCACACCAGATACCTCCCTCCTCCTCCTCCCTaGAGCCTCTGGGCTCCCACAGACAGATGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: NAHTRYLPPPPP*SLWAPTDRCPP
Trigger: AGGAGGGCATCTGTCTGTGGGAGCCCAGAGGCTGCAGGGAGGAGGAGGAGGGAGGTATCTGGTGTGAGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 72 bp CCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTaGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAG +
Preference number: 3 (lower is better)
Translates to: PRPGRSSLSPTH*RFLPDLSAHGK
Trigger: CTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR TCA 72 bp AAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAAGGAGCAGAGCGCGCA +
Preference number: 3 (lower is better)
Translates to: KLTVPHPLEVPP*SVCTWEGAERA
Trigger: TGCGCGCTCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CAA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 3 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR GCA 72 bp CCAGGCTGTCTCCGCACCCAGCGACAGGACTGTGCGTaGTGCTGCTTCTTTTGTTTCCTCCACTTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: PGCLRTQRQDCA*CCFFCFLHFCS
Trigger: GGAACAGAAGTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAGACAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR GCA 72 bp AAGCTGGACAGGCAGATGGTAGGCAGGACACACCTCTaGAATCTCTGGGAAGTGACAAGCAGAGGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: KLDRQMVGRTHL*NLWEVTSRGLP
Trigger: TGGGAGGCCTCTGCTTGTCACTTCCCAGAGATTGCAGAGGTGTGTCCTGCCTACCATCTGCCTGTCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR GCA 72 bp TTTGCCAGGCTGTCTCCGCACCCAGCGACAGGACTGTaGGTGCTGCTGCTTCTTTTGTTTCCTCCACTTCTG +
Preference number: 3 (lower is better)
Translates to: FARLSPHPATGL*VLLLLLFPPLL
Trigger: CAGAAGTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAGACAGCCTGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 72 bp AGGCAGATGGTAGGCAGGACACACCTCTGCAATCTCTaGGAAGTGACAAGCAGAGGCCTCCCAGGGACAAGA +
Preference number: 3 (lower is better)
Translates to: RQMVGRTHLCNL*EVTSRGLPGTR
Trigger: TCTTGTCCCTGGGAGGCCTCTGCTTGTCACTTCCCAGAGATTGCAGAGGTGTGTCCTGCCTACCATCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 3 (lower is better)
Translates to: LHRAESESPPTHLGQAEAPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR GCA 72 bp TGTCTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTaGTTCTTTTGTTTCCTCCACTTCTGTTCCCTCATC +
Preference number: 3 (lower is better)
Translates to: CLRTQRQDCACC*FFCFLHFCSLI
Trigger: GATGAGGGAACAGAAGTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CAA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACCCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 3 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: LHRAESESPPTHLGQAEATLCTL*CFVAPP
Trigger: TGGGGGAGCTACAAAGCACAACAATGTACATAGTGT...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CAA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCCCGGGAGCATCACGTTaGCAACAGGCAGGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSPGASR*QQAGQV
Trigger: CACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGG...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CCA 72 bp ATCCGGGAGCATCACGTTTGCAACAGGCAGGGCAGGTaGTGCATCAGATGTCCAGGACACAGTCATTTGACA +
Preference number: 3 (lower is better)
Translates to: IREHHVCNRQGR*CIRCPGHSHLT
Trigger: TGTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CAA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRTLCTL*CFVAPP
Trigger: TGGGGGAGCTACAAAGCACAACAATGTACATAGTGT...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CAA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: SLHRAESESPPTHLGQAETLCTL*CFVAPP
Trigger: TGGGGGAGCTACAAAGCACAACAATGTACATAGTGT...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CAA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACACCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 3 (lower is better)
Translates to: LSQSPSFSTPSGSITFATPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR-3UTR CAA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTGCCCAGTGGAGGAGTaGTTGAAACAGAAGGATCAA +
Preference number: 3 (lower is better)
Translates to: KGNLGAQPARESLHRAESCPVEE*LKQKDQ
Trigger: TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: EKGNLGAQPARESLHRAETLCTL*CFVAPP
Trigger: TGGGGGAGCTACAAAGCACAACAATGTACATAGTGT...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR-3UTR CAA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGGTGTTCCCCCAGTTCTaGCCTCTCCTGCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEVFPQF*PLLLAG
Trigger: GCCAGCCAGCAGGAGAGGCAAGAACTGGGGGAACAC...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCACAGCCCAGGCGCCCTaGTCGCACAGGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGTAQAP*SHRLGP
Trigger: GGGCCCCAGCCTGTGCGAGCAGGGCGCCTGGGCTGT...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGGTCTTGCAGCATGTaGGGGGAGGCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGSCSM*GEAQAP
Trigger: GGGGGCCTGGGCCTCCCCTCACATGCTGCAAGACCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GTAGCCCCCGCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCCGCAGCAGCCACAGCTaGAGCAGCTGCCGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: VAPAAVHALLHVALVGAARSSHS*SSCRLR
Trigger: ACGCAAGCGGCAGCTGCTGCAGCTGTGGCTGCTGCG...GGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGGCGGTGGCAGTGGCTaGCGCAGCAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPGGGSG*RSSHSC
Trigger: GCAGCTGTGGCTGCTGCGGCAGCCACTGCCACCGCC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGCTTGGCCCAAGGACTaGCGGGACGCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGAWPKD*RDAGGG
Trigger: CCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCCCCGTCCTCTCCGTTaGGCCCAGGGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPPRPLR*AQGCQG
Trigger: TCCCTGGCACCCCTGGGCCCAACGGAGAGGACGGGG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCCCCGTCCTCTCCGTTaGGCCCAGGGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGPRPLR*AQGCQG
Trigger: TCCCTGGCACCCCTGGGCCCAACGGAGAGGACGGGG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCTGGGCATGAGCACGTaGGCGGGGCTCACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPLGMST*AGLTVR
Trigger: CCGCACCGTGAGCCCCGCCCACGTGCTCATGCCCAG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACTGGGCATGAGCACGTaGGCGGGGCTCACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRLGMST*AGLTVR
Trigger: CCGCACCGTGAGCCCCGCCCACGTGCTCATGCCCAG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGGCCAGGGTAGTCGCTaGGGGCAGGGACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPGQGSR*GQGLRG
Trigger: CCCCCTCAGTCCCTGCCCCCAGCGACTACCCTGGCC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGGGGTCTTGCAGCATGTaGGGGGAGGCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HALLHVALVGAAFSKRLLGSCSM*GEAQAP
Trigger: GGGGGCCTGGGCCTCCCCTCACATGCTGCAAGACCC...CAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCCATCACGCTGGGCATaGGCACGTGGGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPPSRWA*ARGRGS
Trigger: TGAGCCCCGCCCACGTGCTCATGCCCAGCGTGATGG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCCATCACGCTGGGCATaGGCACGTGGGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGPSRWA*ARGRGS
Trigger: TGAGCCCCGCCCACGTGCTCATGCCCAGCGTGATGG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACCTTGGCCGCCAGCCTaGGGATGCCCAGCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAPWPPA*GCPALP
Trigger: GGGGAGCGCTGGGCATCCTCAGGCTGGCGGCCAAGG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCGTTGGGCCCAGGGGTaGCAGGGATGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHRWAQG*QGWCRC
Trigger: GCAGCGGCACCATCCCTGGCACCCCTGGGCCCAACG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGCGGCAGCGCTTCAGTaGTGGCCCATCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPAAALQ*WPIRLL
Trigger: GAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGGGCTGCCCAGGGCTaGGCGCAAACTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGAAQG*AQTGRC
Trigger: GCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GTAGCCCCCGCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VAPAAVHALLHVALVGAASDPAG*VALCCQ
Trigger: TTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCT...GGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR TCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCTGCATACCCGGTGGTaGAGCCGGGGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGLHTRW*SRGPQG
Trigger: ACCCTGGGGCCCCCGGCTTCACCACCGGGTATGCAG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACTGCATACCCGGTGGTaGAGCCGGGGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPLHTRW*SRGPQG
Trigger: ACCCTGGGGCCCCCGGCTTCACCACCGGGTATGCAG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGGTCTTGCAGCATGTaGGGGGAGGCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGSCSM*GEAQAP
Trigger: GGGGGCCTGGGCCTCCCCTCACATGCTGCAAGACCC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCACAGGCTGGGGCCCTaGGCCAACAGATGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPHRLGP*ANRCSG
Trigger: GCCACTGCATCTGTTGGCTCAGGGCCCCAGCCTGTG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGCGGAGCTGCCCCCTaGCACACCAGGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGGAAP*HTRHHG
Trigger: TCCATGATGCCTGGTGTGGCAGGGGGCAGCTCCGCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGGCGGTGGCAGTGGCTaGCGCAGCAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRLAARSPCWRRLQQTPAGGGSG*RSSHSC
Trigger: GCAGCTGTGGCTGCTGCGGCAGCCACTGCCACCGCC...AGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGACTGGGTCATGCCCTaGTGCAGGGGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGDWVMP*CRGSLC
Trigger: GCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTACAGGGACTGGGTCATaGCCTGCTGCAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPTGTGS*PAAGAA
Trigger: GGCTGCCCCTGCAGCAGGGCATGACCCAGTCCCTGT...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCGTTGGGCCCAGGGGTaGCAGGGATGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGRWAQG*QGWCRC
Trigger: GCAGCGGCACCATCCCTGGCACCCCTGGGCCCAACG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCGGGCGGGGCTCACGGTaGGGCAGCGCTTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGGRGSR*GSASVL
Trigger: CAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCC...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGGCGGGGCTCACGGTaGGGCAGCGCTTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGRGSR*GSASVL
Trigger: CAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGCTTGGCCCAAGGACTaGCGGGACGCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREAWPKD*RDAGGG
Trigger: CCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGCCAGCCCTGCCAGATaGCCAGCTCTGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRASPAR*PALPSG
Trigger: TCCACTGGGCAGAGCTGGGCATCTGGCAGGGCTGGC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGCACGGACAGGGACTaGGTCATGCCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGTDRD*VMPCCR
Trigger: CCTGCAGCAGGGCATGACCCAGTCCCTGTCCGTGCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGGACGCTGCTGCTTaGGGTCATGGGTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRRDAAA*GHGWRG
Trigger: CCCACGCCACCCATGACCCCAAGCAGCAGCGTCCCT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAAGGAACTCAGCTGCTCTaGCTCCGCCCGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AAVHALLHVALVGAAFSKGTQLL*LRPAWP
Trigger: GGGCCAGGCCGGGCGGAGCCAGAGCAGCTGAGTTCC...TTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCCTCCTCCCCCACCTaGGTGTGGGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHSSSPT*VWAHGV
Trigger: CACCCCATGGGCCCACACCCAGGTGGGGGAGGAGGA...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCATGTGGCGACAGTCATaGCCTCGGGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGMWRQS*PRAGSW
Trigger: CCAGCTCCCTGCCCGAGGTCATGACTGTCGCCACAT...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAATGTGGCGACAGTCATaGCCTCGGGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRMWRQS*PRAGSW
Trigger: CCAGCTCCCTGCCCGAGGTCATGACTGTCGCCACAT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACCATCACGCTGGGCATaGGCACGTGGGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPPSRWA*ARGRGS
Trigger: TGAGCCCCGCCCACGTGCTCATGCCCAGCGTGATGG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCGGGGTGGTCCCGGGGTaGACTCAGCAAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGGVVPG*TQQGLG
Trigger: CCCCAACCCTTGCTGAGTTCACCCCGGGACCACCCC...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCACAGGCTGGGGCCCTaGGCCAACAGATGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHHRLGP*ANRCSG
Trigger: GCCACTGCATCTGTTGGCTCAGGGCCCCAGCCTGTG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGCCAGAGGGACTCCCTaGAGGGCCCATGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREARGTP*RAHGVP
Trigger: GGGAACCCCATGGGCCCTGCAGGGAGTCCCTCTGGC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCGCCAGAGGGACTCCCTaGAGGGCCCATGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGARGTP*RAHGVP
Trigger: GGGAACCCCATGGGCCCTGCAGGGAGTCCCTCTGGC...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGGGCGGAGCTGCCCCCTaGCACACCAGGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: HALLHVALVGAAFSKRLLGGAAP*HTRHHG
Trigger: TCCATGATGCCTGGTGTGGCAGGGGGCAGCTCCGCC...CAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR GCA 90 bp GCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGTCCAGGTCAAGGCGGAGCTaGCCCCTGCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: ALLHVALVGAAFSKRLLSRSRRS*PLPHQA
Trigger: TGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCT...GGACAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGCGCAAACTGGGCGGTaGTGGGTGCATACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGAQTGR*WVHTGL
Trigger: GAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACACAGGGACTGGGTCATaGCCTGCTGCAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHTGTGS*PAAGAA
Trigger: GGCTGCCCCTGCAGCAGGGCATGACCCAGTCCCTGT...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGCGGCAGCGCTTCAGTaGTGGCCCATCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGAAALQ*WPIRLL
Trigger: GAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAACAGCCCAGGCGCCCTaGTCGCACAGGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAETAQAP*SHRLGP
Trigger: GGGCCCCAGCCTGTGCGAGCAGGGCGCCTGGGCTGT...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GTAGCCCCCGCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCATCCAGCCGGCTGAGTaGCGCTTTGTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VAPAAVHALLHVALVGAAIQPAE*RFVAKA
Trigger: TGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGAT...GGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCTGTCCCAGGCACTGTaGGGAGGTCAAGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGLSQAL*GGQGGA
Trigger: AGCTCCGCCTTGACCTCCCCACAGTGCCTGGGACAG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTAGGCTTCACGGGCACTaGCTTCCAGCTGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPRLHGH*LPAARG
Trigger: CCCACGTGCAGCTGGAAGCCAGTGCCCGTGAAGCCT...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCTTCACGGGCACTaGCTTCCAGCTGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRRLHGH*LPAARG
Trigger: CCCACGTGCAGCTGGAAGCCAGTGCCCGTGAAGCCT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCAGGCCCCAGGAAGCTaGAACCCTGGCCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGQAPGS*NPGQGS
Trigger: ACTACCCTGGCCAGGGTTCCAGCTTCCTGGGGCCTG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGAACTCAGCAAGGGTTaGGGTGCTGGGCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPELSKG*GAGRGG
Trigger: CCCACCACGCCCAGCACCCCAACCCTTGCTGAGTTC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGGTCCTAAGCTCGCTTaGCCCAAGGACTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGGPKLA*PKDCRD
Trigger: GTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCGGCTCCAGACATGCTaGGGGGCCCCATCACGCCTG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTRLQTC*GAPSRL
Trigger: CAGGCGTGATGGGGCCCCCCAGCATGTCTGGAGCCG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCCGGCTCCAGACATGCTaGGGGGCCCCATCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGRLQTC*GAPSRL
Trigger: CAGGCGTGATGGGGCCCCCCAGCATGTCTGGAGCCG...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTGHRGH*SQRPRG
Trigger: TCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACCTGCTCGCACAGGCTaGGGCCCTGAGCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRPARTG*GPEPTD
Trigger: ATCTGTTGGCTCAGGGCCCCAGCCTGTGCGAGCAGG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CAA 72 bp CCTGGGGCCTGCATCAGGCCATGGCTGAGTGGGACTTaGCCAGGCTGTCTCCGCACCCAGCGACAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PGACIRPWLSGT*PGCLRTQRQDC
Trigger: ACAGTCCTGTCGCTGGGTGCGGAGACAGCCTGGCAAAGTCCCACTCAGCCATGGCCTGATGCAGGCCCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRSDPAG*VALCCQ
Trigger: TTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCTGCATACCCGGTGGTaGAGCCGGGGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRLHTRW*SRGPQG
Trigger: ACCCTGGGGCCCCCGGCTTCACCACCGGGTATGCAG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGCTGCAGCAGCTGCCGCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTCTGCATACCCGGTGGTaGAGCCGGGGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TAAAAAACVKSVEGLAACLHTRW*SRGPQG
Trigger: ACCCTGGGGCCCCCGGCTTCACCACCGGGTATGCAG...ACATGCTGCAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR TCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGGGTCTTGCAGCATGTaGGGGGAGGCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRGSCSM*GEAQAP
Trigger: GGGGGCCTGGGCCTCCCCTCACATGCTGCAAGACCC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACAGCTGCCGCTTGCGTaGAGTCAGTGGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRQLPLA*SQWRVL
Trigger: CAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGCCATCACGCTGGGCATaGGCACGTGGGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVPSRWA*ARGRGS
Trigger: TGAGCCCCGCCCACGTGCTCATGCCCAGCGTGATGG...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACGCTGGGGGAGGGTTTaGATGGTGCAGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPRWGRV*MVQLGT
Trigger: GGTCCCCAGCTGCACCATTCAAACCCTCCCCCAGCG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGCATCAGGCCATGGCTaGGTGGGACTTTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPASGHG*VGLCQA
Trigger: AGCCTGGCAAAGTCCCACTCAGCCATGGCCTGATGC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGCGGAGCTGCCCCCTaGCACACCAGGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGGAAP*HTRHHG
Trigger: TCCATGATGCCTGGTGTGGCAGGGGGCAGCTCCGCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAAGGTCAAGGCGGAGCTaGCCCCTGCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAARSRRS*PLPHQA
Trigger: TGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCT...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCGCAGCAGCCACAGCTaGAGCAGCTGCCGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGRSSHS*SSCRLR
Trigger: ACGCAAGCGGCAGCTGCTGCAGCTGTGGCTGCTGCG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCGCAGCAGCCACAGCTaGAGCAGCTGCCGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRERSSHS*SSCRLR
Trigger: ACGCAAGCGGCAGCTGCTGCAGCTGTGGCTGCTGCG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGGCGGTGGCAGTGGCTaGCGCAGCAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRGGGSG*RSSHSC
Trigger: GCAGCTGTGGCTGCTGCGGCAGCCACTGCCACCGCC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGACTGGGTCATGCCCTaGTGCAGGGGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREDWVMP*CRGSLC
Trigger: GCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGGACTGGGTCATGCCCTaGTGCAGGGGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQDWVMP*CRGSLC
Trigger: GCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTC...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGCGGCAGCGCTTCAGTaGTGGCCCATCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAAAALQ*WPIRLL
Trigger: GAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGGCGGGGCTCACGGTaGGGCAGCGCTTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGRGSR*GSASVL
Trigger: CAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCAGGTGACCTGCTGGTaGCATCTGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGQVTCW*HLAWEA
Trigger: TGCCTCCCAAGCCAGATGGCACCAGCAGGTCACCTG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGAGGGTTTGAATGGTaGAGCTGGGGACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGGFEW*SWGPGG
Trigger: CCCTCCAGGTCCCCAGCTGCACCATTCAAACCCTCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGCTTGGCCCAAGGACTaGCGGGACGCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRAWPKD*RDAGGG
Trigger: CCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACACACGGCTGGGCTaGCAGAGCTCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAHTRLG*QSSRPP
Trigger: TGGGGGCCTGGAGCTCTGGCAGCCCAGCCGTGTGTG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGAGGGCCTGGGGCCTaGATCAGGCCATGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGGPGA*IRPWLS
Trigger: ACTCAGCCATGGCCTGATGCAGGCCCCAGGCCCTCC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCTGTCCCAGGCACTGTaGGGAGGTCAAGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHLSQAL*GGQGGA
Trigger: AGCTCCGCCTTGACCTCCCCACAGTGCCTGGGACAG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGTCCCTGTCCCAGGCACTGTaGGGAGGTCAAGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALLHVALVGAAFSKRLLSLSQAL*GGQGGA
Trigger: AGCTCCGCCTTGACCTCCCCACAGTGCCTGGGACAG...GGACAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGGCTGGGCGCAAACTaGGCGGTGCTGGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGLGAN*AVLGAY
Trigger: GTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGCACGGACAGGGACTaGGTCATGCCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGTDRD*VMPCCR
Trigger: CCTGCAGCAGGGCATGACCCAGTCCCTGTCCGTGCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTTATAATGCAGTCCCGTaGGGCCAGGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPYNAVP*GQARTG
Trigger: CCCTGTCCGTGCCTGGCCCCACGGGACTGCATTATA...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGGGTTCCCTGGCAGTaGGGAACTGGGATAGCCCGG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGVPWQ*GTGIAR
Trigger: CCGGGCTATCCCAGTTCCCCACTGCCAGGGAACCCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCCCCGTCCTCTCCGTTaGGCCCAGGGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRPRPLR*AQGCQG
Trigger: TCCCTGGCACCCCTGGGCCCAACGGAGAGGACGGGG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGCAGCGCTTCAGTGCTaGCCCATCCGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHAALQC*PIRLLL
Trigger: AAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGCCAGGGTAGTCGCTaGGGGCAGGGACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGQGSR*GQGLRG
Trigger: CCCCCTCAGTCCCTGCCCCCAGCGACTACCCTGGCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGGCCAGGGTAGTCGCTaGGGGCAGGGACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEGQGSR*GQGLRG
Trigger: CCCCCTCAGTCCCTGCCCCCAGCGACTACCCTGGCC...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTTTTGAATGGTGCAGCTaGGGACCTGGAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPFEWCS*GPGGAP
Trigger: TGGGGCCCCTCCAGGTCCCCAGCTGCACCATTCAAA...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGAGCAGGTCCAGAGCTaGTTCTGGGGCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAEQVQS*FWGLPG
Trigger: GCCGGGGAGGCCCCAGAACCAGCTCTGGACCTGCTC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGAACTCAGCTGCTCTaGCTCCGCCCGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGTQLL*LRPAWP
Trigger: GGGCCAGGCCGGGCGGAGCCAGAGCAGCTGAGTTCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309315.9
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCTGGGTGTGGGCCCATaGGGTGGAGACAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHLGVGP*GGDREV
Trigger: CACCTCTCTGTCTCCACCCCATGGGCCCACACCCAG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGCCTCTCCTGCTGGCTaGCTGGGAAGGCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAASPAG*LGRPSR
Trigger: CCTTGAGGGCCTTCCCAGCCAGCCAGCAGGAGAGGC...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTATGTGGCGACAGTCATaGCCTCGGGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTMWRQS*PRAGSW
Trigger: CCAGCTCCCTGCCCGAGGTCATGACTGTCGCCACAT...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAATGTGGCGACAGTCATaGCCTCGGGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPMWRQS*PRAGSW
Trigger: CCAGCTCCCTGCCCGAGGTCATGACTGTCGCCACAT...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCCCCCGCTCACAGTTaGGCTGCAGGTACGACTCCA +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHSPAHS*AAGTTP
Trigger: TGGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGA...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGGGGTGGTCCCGGGGTaGACTCAGCAAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGGVVPG*TQQGLG
Trigger: CCCCAACCCTTGCTGAGTTCACCCCGGGACCACCCC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCCCCGGGGACCTCCATaGTGCAGAAACTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPPRGPP*CRNWLL
Trigger: TAACAGCCAGTTTCTGCAGCATGGAGGTCCCCGGGG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCAAGGGTGTCATTCCTaGTGCCCGGGTGGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGQGCHS*CPGGVH
Trigger: ATGAACCCCACCCGGGCAGCAGGAATGACACCCTTG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGGGCAGACGCTGCCCTaGATACAAGGGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGGQTLP*IQGCHS
Trigger: GGAATGACACCCTTGTATGCAGGGCAGCGTCTGCCC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGGCAGACGCTGCCCTaGATACAAGGGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGQTLP*IQGCHS
Trigger: GGAATGACACCCTTGTATGCAGGGCAGCGTCTGCCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCTGGGCGGTGCTGGGTaGATACTGGCCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRELGGAG*ILASLQ
Trigger: CTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCTGGGCGGTGCTGGGTaGATACTGGCCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGLGGAG*ILASLQ
Trigger: CTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCTGGGCGGTGCTGGGTaGATACTGGCCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTLGGAG*ILASLQ
Trigger: CTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGCGCAAACTGGGCGGTaGTGGGTGCATACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGAQTGR*WVHTGL
Trigger: GAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCGGCAGCGCTTCAGTaGTGGCCCATCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEAAALQ*WPIRLL
Trigger: GAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGC...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGGGGTCCAGGTGACCTaGTGGTGCCATCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPGVQVT*WCHLAW
Trigger: CCAAGCCAGATGGCACCAGCAGGTCACCTGGACCCC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGGAGGGTTTGAATGGTaGAGCTGGGGACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHGGFEW*SWGPGG
Trigger: CCCTCCAGGTCCCCAGCTGCACCATTCAAACCCTCC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTAGGCCCCCAAGAGGCTaGCATTCAGCGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPRPPRG*HSARFQ
Trigger: TTGGAACCTCGCTGAATGGCAGCCTCTTGGGGGCCT...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCAGGCCCCCAAGAGGCTaGCATTCAGCGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGRPPRG*HSARFQ
Trigger: TTGGAACCTCGCTGAATGGCAGCCTCTTGGGGGCCT...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACACACACGGCTGGGCTaGCAGAGCTCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEHTRLG*QSSRPP
Trigger: TGGGGGCCTGGAGCTCTGGCAGCCCAGCCGTGTGTG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCACACACGGCTGGGCTaGCAGAGCTCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGHTRLG*QSSRPP
Trigger: TGGGGGCCTGGAGCTCTGGCAGCCCAGCCGTGTGTG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTGAGGGGAGGCCCAGGCCCTATCTGGAACTCAGCTaGTCTGGCTCCGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: ACVKSVEGLAACEGRPRPYLELS*SGSARP
Trigger: AGGCCGGGCGGAGCCAGAGCAGCTGAGTTCCAGATA...GGGCCTGGGCCTCCCCTCACATGCTGCAAGACCCTCCACTGACTTCACGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR GCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCTTGAAGCTGGCGCCCTaGCCGTTGAACTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGLKLAP*PLNCSV
Trigger: CACAGAGCAGTTCAACGGGCAGGGCGCCAGCTTCAA...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACACAGCCCAGGCGCCCTaGTCGCACAGGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHTAQAP*SHRLGP
Trigger: GGGCCCCAGCCTGTGCGAGCAGGGCGCCTGGGCTGT...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGCAGGCATCATGGAGCTaGCAGAGGGACTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HALLHVALVGAAFSKRLLQASWS*QRDSLA
Trigger: AGCCAGGGAGTCCCTCTGGCAGCTCCATGATGCCTG...CAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGGTTCCCCAAAACCTaGCTCTGTGTCGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGFPKT*LCVALP
Trigger: TGGCAACGCGACACAGAGCCAGGTTTTGGGGAACCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGGGGCTGCCCAGGGCTaGGCGCAAACTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGGAAQG*AQTGRC
Trigger: GCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTAGGGACGCTGCTGCTTaGGGTCATGGGTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEARDAAA*GHGWRG
Trigger: CCCACGCCACCCATGACCCCAAGCAGCAGCGTCCCT...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCCTCGGGCAGGGAGCTaGATCCTGCGGAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTPRAGS*ILRKVM
Trigger: CATCACCTTCCGCAGGATCCAGCTCCCTGCCCGAGG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACCTCGGGCAGGGAGCTaGATCCTGCGGAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAPRAGS*ILRKVM
Trigger: CATCACCTTCCGCAGGATCCAGCTCCCTGCCCGAGG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGCAGCGCTTCAGTGCTaGCCCATCCGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREAALQC*PIRLLL
Trigger: AAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGAACTCAGCAAGGGTTaGGGTGCTGGGCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTELSKG*GAGRGG
Trigger: CCCACCACGCCCAGCACCCCAACCCTTGCTGAGTTC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCTGGTGCCATCTGGCTTaGGAGGCAGGCGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGWCHLA*EAGGRL
Trigger: AAGTCTACCGCCTGCCTCCCAAGCCAGATGGCACCA...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGTCCTAAGCTCGCTTaGCCCAAGGACTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGPKLA*PKDCRD
Trigger: GTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGTCCTAAGCTCGCTTaGCCCAAGGACTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAGPKLA*PKDCRD
Trigger: GTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACC...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACGGCTCCAGACATGCTaGGGGGCCCCATCACGCCTG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRRLQTC*GAPSRL
Trigger: CAGGCGTGATGGGGCCCCCCAGCATGTCTGGAGCCG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHGHRGH*SQRPRG
Trigger: TCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCC...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCTGTCCCCCACCCATTaGAGGTTCCTCCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGLSPTH*RFLPDL
Trigger: CAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCCTGCTCGCACAGGCTaGGGCCCTGAGCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTPARTG*GPEPTD
Trigger: ATCTGTTGGCTCAGGGCCCCAGCCTGTGCGAGCAGG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGTCCCAGCCAGAGGGACTCCCTaGCTCTGTGTCGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LAARSPCWRRLQQTPAVPARGTP*LCVALP
Trigger: TGGCAACGCGACACAGAGCCAGGGAGTCCCTCTGGC...TGGGACAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR TCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCTGCATACCCGGTGGTaGAGCCGGGGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGLHTRW*SRGPQG
Trigger: ACCCTGGGGCCCCCGGCTTCACCACCGGGTATGCAG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGGGTCTTGCAGCATGTaGGGGGAGGCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGGSCSM*GEAQAP
Trigger: GGGGGCCTGGGCCTCCCCTCACATGCTGCAAGACCC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACAGCTGCCGCTTGCGTaGAGTCAGTGGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAQLPLA*SQWRVL
Trigger: CAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGCTTCCAGAGGGCGATaGGTGCAAGGAGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGASRGR*VQGVEV
Trigger: AACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCAGGGTCTTGTAGACTaGGTCTCGCAGCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPQGLVD*VSQLED
Trigger: GTCTTCCAGCTGCGAGACTCAGTCTACAAGACCCTG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCCAGGGTCTTGTAGACTaGGTCTCGCAGCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGQGLVD*VSQLED
Trigger: GTCTTCCAGCTGCGAGACTCAGTCTACAAGACCCTG...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGATCCTGCGGAAGGTaGTGGGGCACTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGSCGR*WGTSGT
Trigger: TGTCCCTGAAGTGCCCCATCACCTTCCGCAGGATCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGGATCCTGCGGAAGGTaGTGGGGCACTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTGSCGR*WGTSGT
Trigger: TGTCCCTGAAGTGCCCCATCACCTTCCGCAGGATCC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTATGTGGCGACAGTCATaGCCTCGGGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAMWRQS*PRAGSW
Trigger: CCAGCTCCCTGCCCGAGGTCATGACTGTCGCCACAT...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACCGCTGGGGGAGGGTTTaGATGGTGCAGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHRWGRV*MVQLGT
Trigger: GGTCCCCAGCTGCACCATTCAAACCCTCCCCCAGCG...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGTGGAAGGACAAGGTGTaGGGCTGTGAGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREWKDKV*GCETRG
Trigger: GCCCCTGGTCTCACAGCCTCACACCTTGTCCTTCCA...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCATGGAAGGACAAGGTGTaGGGCTGTGAGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPWKDKV*GCETRG
Trigger: GCCCCTGGTCTCACAGCCTCACACCTTGTCCTTCCA...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACCACAGGCTGGGGCCCTaGGCCAACAGATGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHHRLGP*ANRCSG
Trigger: GCCACTGCATCTGTTGGCTCAGGGCCCCAGCCTGTG...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCAGCCGAGCCTTGGCTTaGAACATCCAGAGCTCAACC +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGSRALA*NIQSST
Trigger: GGTTGAGCTCTGGATGTTTCAAGCCAAGGCTCGGCT...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACAGGCATCATGGAGCTaGCAGAGGGACTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAQASWS*QRDSLQ
Trigger: CTGCAGGGAGTCCCTCTGGCAGCTCCATGATGCCTG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTCCTTCAGCAAACGCCTaGTGTCCCAGGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: TRLAARSPCWRRLQQTPAPSANA*CPRHCG
Trigger: CCCACAGTGCCTGGGACAGCAGGCGTTTGCTGAAGG...AGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR GCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACCGCAGCAGCCACAGCTaGAGCAGCTGCCGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHRSSHS*SSCRLR
Trigger: ACGCAAGCGGCAGCTGCTGCAGCTGTGGCTGCTGCG...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGGGCAGACGCTGCCCTaGATACAAGGGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHGQTLP*IQGCHS
Trigger: GGAATGACACCCTTGTATGCAGGGCAGCGTCTGCCC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAACAGGGACTGGGTCATaGCCTGCTGCAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRTGTGS*PAAGAA
Trigger: GGCTGCCCCTGCAGCAGGGCATGACCCAGTCCCTGT...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACACAGGGACTGGGTCATaGCCTGCTGCAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHTGTGS*PAAGAA
Trigger: GGCTGCCCCTGCAGCAGGGCATGACCCAGTCCCTGT...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCATGTAAGGGACGCTGCTaGTTGGGGTCATGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAACKGRC*LGSWVA
Trigger: CGCCACCCATGACCCCAAGCAGCAGCGTCCCTTACA...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAACATGTAAGGGACGCTaGTGCTTGGGGTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRTCKGR*CLGSWV
Trigger: CACCCATGACCCCAAGCAGCAGCGTCCCTTACATGT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCAGGTGACCTGCTGGTaGCATCTGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTQVTCW*HLAWEA
Trigger: TGCCTCCCAAGCCAGATGGCACCAGCAGGTCACCTG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCAGGTGACCTGCTGGTaGCATCTGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGQVTCW*HLAWEA
Trigger: TGCCTCCCAAGCCAGATGGCACCAGCAGGTCACCTG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGGAGGGTTTGAATGGTaGAGCTGGGGACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPGGFEW*SWGPGG
Trigger: CCCTCCAGGTCCCCAGCTGCACCATTCAAACCCTCC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGAGGGTTTGAATGGTaGAGCTGGGGACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGGFEW*SWGPGG
Trigger: CCCTCCAGGTCCCCAGCTGCACCATTCAAACCCTCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAACAGCCCAGGCGCCCTaGTCGCACAGGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAETAQAP*SHRLGP
Trigger: GGGCCCCAGCCTGTGCGAGCAGGGCGCCTGGGCTGT...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCGGGAGCATCACGTTTaGAACAGGCAGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREREHHV*NRQGRW
Trigger: CCACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACCTTCAGCAAACGCCTaGTGTCCCAGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPPSANA*CPRHWL
Trigger: GAGCCAGTGCCTGGGACAGCAGGCGTTTGCTGAAGG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413916.5
ENST00000433667.5
CDS-3UTR CCA 90 bp GCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTGAGGGGAGGCCCAGGCCCGGAGTTCATTGGCAATaGAGCAGCCTACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ACVKSVEGLAACEGRPRPGVHWQ*SSLQAG
Trigger: CCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCC...GGGCCTGGGCCTCCCCTCACATGCTGCAAGACCCTCCACTGACTTCACGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACCACACCAGGCATCATaGAGCTGCCAGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPPHQAS*SCQRDS
Trigger: GGAGTCCCTCTGGCAGCTCCATGATGCCTGGTGTGG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACCCATCGCTCCATACTaGCTCAGCTCCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAPIAPY*LSSWLC
Trigger: GCAGAGCCAGGAGCTGAGCCAGTATGGAGCGATGGG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACCCATCGCTCCATACTaGCTCAGCTCCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPPIAPY*LSSWLC
Trigger: GCAGAGCCAGGAGCTGAGCCAGTATGGAGCGATGGG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCCAGGATACCCATGTTaGGGCAGACGCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREPGYPC*GRRCPA
Trigger: TGCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGGCTGGGCGCAAACTaGGCGGTGCTGGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGLGAN*AVLGAY
Trigger: GTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGGGCTGGGCGCAAACTaGGCGGTGCTGGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEGLGAN*AVLGAY
Trigger: GTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCC...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGGGCTGCCCAGGGCTaGGCGCAAACTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGAAQG*AQTGRC
Trigger: GCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGGGCTGCCCAGGGCTaGGCGCAAACTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGAAQG*AQTGRC
Trigger: GCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGGCACGGACAGGGACTaGGTCATGCCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGGTDRD*VMPCCR
Trigger: CCTGCAGCAGGGCATGACCCAGTCCCTGTCCGTGCC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCATATAATGCAGTCCCGTaGGGCCAGGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAYNAVP*GQARTG
Trigger: CCCTGTCCGTGCCTGGCCCCACGGGACTGCATTATA...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTTATAATGCAGTCCCGTaGGGCCAGGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTYNAVP*GQARTG
Trigger: CCCTGTCCGTGCCTGGCCCCACGGGACTGCATTATA...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCTGGCAGTGGGGAACTaGGATAGCCCGGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGLAVGN*DSPGWN
Trigger: GTTCCATCCCGGGCTATCCCAGTTCCCCACTGCCAG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGGGTTCCCTGGCAGTaGGGAACTGGGATAGCCCGG +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGVPWQ*GTGIAR
Trigger: CCGGGCTATCCCAGTTCCCCACTGCCAGGGAACCCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTTGGCGTGGGGTTCCCTaGCAGTGGGGAACTGGGATA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTWRGVP*QWGTGI
Trigger: TATCCCAGTTCCCCACTGCCAGGGAACCCCACGCCA...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGTGGCGTGGGGTTCCCTaGCAGTGGGGAACTGGGATA +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREWRGVP*QWGTGI
Trigger: TATCCCAGTTCCCCACTGCCAGGGAACCCCACGCCA...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAGGGACGCTGCTGCTTaGGGTCATGGGTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGRDAAA*GHGWRG
Trigger: CCCACGCCACCCATGACCCCAAGCAGCAGCGTCCCT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAAGGGACGCTGCTGCTTaGGGTCATGGGTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRRDAAA*GHGWRG
Trigger: CCCACGCCACCCATGACCCCAAGCAGCAGCGTCCCT...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCCCCGTCCTCTCCGTTaGGCCCAGGGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGPRPLR*AQGCQG
Trigger: TCCCTGGCACCCCTGGGCCCAACGGAGAGGACGGGG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCTGGGCATGAGCACGTaGGCGGGGCTCACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHLGMST*AGLTVR
Trigger: CCGCACCGTGAGCCCCGCCCACGTGCTCATGCCCAG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGCTGGGCATGAGCACGTaGGCGGGGCTCACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGLGMST*AGLTVR
Trigger: CCGCACCGTGAGCCCCGCCCACGTGCTCATGCCCAG...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGTCCAGGTGACCTGCTaGTGCCATCTGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPVQVTC*CHLAWE
Trigger: CTCCCAAGCCAGATGGCACCAGCAGGTCACCTGGAC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGAGGGGCCCCAAGGTTaGAGGTGTGTAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGEGPQG*RCVVLV
Trigger: CACCAGGACTACACACCTCCAACCTTGGGGCCCCTC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGGGGGAGGGTTTGAATaGTGCAGCTGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTGGGFE*CSWGPG
Trigger: TCCAGGTCCCCAGCTGCACCATTCAAACCCTCCCCC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGTAGCTCATCAGGGTTaGTCAGTTCCGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPVAHQG*SVPGAG
Trigger: ACCTGCTCCCGGAACTGACCAACCCTGATGAGCTAC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGACACCACACACGGCTaGGCTGCCAGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRDTTHG*AARAPG
Trigger: GCCTGGAGCTCTGGCAGCCCAGCCGTGTGTGGTGTC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCAGGAACATGCTGGCTaGACAGCTGGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREQEHAG*TAGSPL
Trigger: GAGAGGGGAGCCAGCTGTCCAGCCAGCATGTTCCTG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACAGGAACATGCTGGCTaGACAGCTGGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPQEHAG*TAGSPL
Trigger: GAGAGGGGAGCCAGCTGTCCAGCCAGCATGTTCCTG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGCTGGGTGTGGGCCCATaGGGTGGAGACAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVLGVGP*GGDREV
Trigger: CACCTCTCTGTCTCCACCCCATGGGCCCACACCCAG...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTCCCCCACCTGGGTGTaGGCCCATGGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRSPTWV*AHGVET
Trigger: TGTCTCCACCCCATGGGCCCACACCCAGGTGGGGGA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEASDPAG*VALCCQ
Trigger: TTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCT...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGACCTCTTGGTTTGGTaGCATGTAAGGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRDLLVW*HVRDAA
Trigger: AGCAGCGTCCCTTACATGTCACCAAACCAAGAGGTC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGATCCGCTTTATCTTGGTaGTGCAGTGCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRSALSW*CSAQQA
Trigger: TGCCTGCTGAGCACTGCATCACCAAGATAAAGCGGA...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTTGGCGCCCTGCCCGTTaGACTGCTCTGTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAWRPAR*TALWAY
Trigger: ATAAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCA...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGTGGCGCCCTGCCCGTTaGACTGCTCTGTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVWRPAR*TALWAY
Trigger: ATAAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCA...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGGCAATCTCTGGGAAGTaGCAAGCAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQAISGK*QAEASQ
Trigger: CTGGGAGGCCTCTGCTTGTCACTTCCCAGAGATTGC...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGACTGGAGGAAATGGTaGCCCGGACCCCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRDWRKW*PGPPPS
Trigger: GCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAGTC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACACCTTGGCCGCCAGCCTaGGGATGCCCAGCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATPWPPA*GCPALP
Trigger: GGGGAGCGCTGGGCATCCTCAGGCTGGCGGCCAAGG...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGTCTGAGAGGTGTTTGTaGTGGAGCACAGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGSERCL*WSTGPR
Trigger: CCGTGGCCCTGTGCTCCATCACAAACACCTCTCAGA...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGCGGTGGCAGTGGCTaGCGCAGCAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGGGSG*RSSHSC
Trigger: GCAGCTGTGGCTGCTGCGGCAGCCACTGCCACCGCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACCCCGGGGACCTCCATaGTGCAGAAACTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAPRGPP*CRNWLL
Trigger: TAACAGCCAGTTTCTGCAGCATGGAGGTCCCCGGGG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCAAGGGTGTCATTCCTaGTGCCCGGGTGGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGQGCHS*CPGGVH
Trigger: ATGAACCCCACCCGGGCAGCAGGAATGACACCCTTG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGGGCAGACGCTGCCCTaGATACAAGGGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTGQTLP*IQGCHS
Trigger: GGAATGACACCCTTGTATGCAGGGCAGCGTCTGCCC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGGGCAGACGCTGCCCTaGATACAAGGGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPGQTLP*IQGCHS
Trigger: GGAATGACACCCTTGTATGCAGGGCAGCGTCTGCCC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCCTCCTTGCAGATACTaGTGCCCTGGATACACCTCA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPPPCRY*CPGYTS
Trigger: TGAGGTGTATCCAGGGCAGCAGTATCTGCAAGGAGG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCTGGGCGGTGCTGGGTaGATACTGGCCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGLGGAG*ILASLQ
Trigger: CTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGCGCAAACTGGGCGGTaGTGGGTGCATACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRAQTGR*WVHTGL
Trigger: GAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCCAGAGGGCGATGAGTaGAAGGAGTTGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTPEGDE*KELRLG
Trigger: GCCCAACCTCAACTCCTTGCACTCATCGCCCTCTGG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTATCTTGGTGATGCAGTaGTCAGCAGGCAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTILVMQ*SAGRRR
Trigger: GCGCCTCCTGCCTGCTGAGCACTGCATCACCAAGAT...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAATCTTGGTGATGCAGTaGTCAGCAGGCAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAILVMQ*SAGRRR
Trigger: GCGCCTCCTGCCTGCTGAGCACTGCATCACCAAGAT...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACGTTGGGCCCAGGGGTaGCAGGGATGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAERWAQG*QGWCRC
Trigger: GCAGCGGCACCATCCCTGGCACCCCTGGGCCCAACG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGACCTTGATAGCTGTCTaGTCCACCCCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGTLIAV*STPSSP
Trigger: CGGAGAGGACGGGGTGGAGCAGACAGCTATCAAGGT...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCGCTCACAGTTGAGCTaGAGGTACGACTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHRSQLS*RYDSRS
Trigger: TGACCTGGAGTCGTACCTGCAGCTCAACTGTGAGCG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGCGGCAGCGCTTCAGTaGTGGCCCATCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGAAALQ*WPIRLL
Trigger: GAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGGCGGGGCTCACGGTaGGGCAGCGCTTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGRGSR*GSASVL
Trigger: CAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGGGGTCCAGGTGACCTaGTGGTGCCATCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEGVQVT*WCHLAW
Trigger: CCAAGCCAGATGGCACCAGCAGGTCACCTGGACCCC...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGCTTGGCCCAAGGACTaGCGGGACGCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQAWPKD*RDAGGG
Trigger: CCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRQQKPF*SSRLGR
Trigger: TCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAAACAACTGTCTCAGTaGCCCAGGGCAAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRKQLSQ*PRASPD
Trigger: ATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCGTCGGCAGAGCCACTaGGCTCTTCCTGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRRRQSH*ALPARS
Trigger: ACTGCGAGCAGGAAGAGCGCAGTGGCTCTGCCGACG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413916.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGGAGTTCATTGGCAATaGAGCAGCCTACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPGVHWQ*SSLQAG
Trigger: CCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGAGTTCATTGGCAATaGAGCAGCCTACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGVHWQ*SSLQAG
Trigger: CCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCCACACCAGGCATCATaGAGCTGCCAGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAPHQAS*SCQRDS
Trigger: GGAGTCCCTCTGGCAGCTCCATGATGCCTGGTGTGG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGCCACACCAGGCATCATaGAGCTGCCAGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVPHQAS*SCQRDS
Trigger: GGAGTCCCTCTGGCAGCTCCATGATGCCTGGTGTGG...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACAAACTGGGCGGTGCTaGGTGCATACTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPQTGRC*VHTGLL
Trigger: AAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGGGGCTGCCCAGGGCTaGGCGCAAACTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKGAAQG*AQTGRC
Trigger: GCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACGCAGCTGGAAGACATaGTTGCTTACAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRRSWKT*LLTARL
Trigger: CAACCTGGCTGTAAGCAACCATGTCTTCCAGCTGCG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACCTCGGGCAGGGAGCTaGATCCTGCGGAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRPRAGS*ILRKVM
Trigger: CATCACCTTCCGCAGGATCCAGCTCCCTGCCCGAGG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAGGCTTCACGGGCACTaGCTTCCAGCTGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGRLHGH*LPAARG
Trigger: CCCACGTGCAGCTGGAAGCCAGTGCCCGTGAAGCCT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACCTGGGCATGAGCACGTaGGCGGGGCTCACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDLGMST*AGLTVR
Trigger: CCGCACCGTGAGCCCCGCCCACGTGCTCATGCCCAG...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGCCAGGGTAGTCGCTaGGGGCAGGGACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGQGSR*GQGLRG
Trigger: CCCCCTCAGTCCCTGCCCCCAGCGACTACCCTGGCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGAACTCAGCAAGGGTTaGGGTGCTGGGCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRELSKG*GAGRGG
Trigger: CCCACCACGCCCAGCACCCCAACCCTTGCTGAGTTC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAAGTCAGGAGGCTGCTaGGAATGTCAGACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRKSGGC*ECQTGR
Trigger: CCTACCAGTCTGACATTCCCAGCAGCCTCCTGACTT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACCTGCTGGTGCCATCTaGCTTGGGAGGCAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRPAGAI*LGRQAV
Trigger: TACCGCCTGCCTCCCAAGCCAGATGGCACCAGCAGG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTTCCCAGGATTGTGAGTaGGGTCCAGGTGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTSQDCE*GPGDLL
Trigger: CAGCAGGTCACCTGGACCCCACTCACAATCCTGGGA...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGTCCCAGGATTGTGAGTaGGGTCCAGGTGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGSQDCE*GPGDLL
Trigger: CAGCAGGTCACCTGGACCCCACTCACAATCCTGGGA...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCATCCCAGGATTGTGAGTaGGGTCCAGGTGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPSQDCE*GPGDLL
Trigger: CAGCAGGTCACCTGGACCCCACTCACAATCCTGGGA...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTTTTGAATGGTGCAGCTaGGGACCTGGAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAFEWCS*GPGGAP
Trigger: TGGGGCCCCTCCAGGTCCCCAGCTGCACCATTCAAA...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGGTCCTAAGCTCGCTTaGCCCAAGGACTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRGPKLA*PKDCRD
Trigger: GTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGTGTCCCCGCCGGGCTTaGGGTAAACACAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRECPRRA*GKHRIS
Trigger: ACTGATCCTGTGTTTACCCCAAGCCCGGCGGGGACA...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGGHRGH*SQRPRG
Trigger: TCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCATGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPCLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRECLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACTGTCCCCCACCCATTaGAGGTTCCTCCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAALSPTH*RFLPDL
Trigger: CAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCTGTCCCCCACCCATTaGAGGTTCCTCCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTLSPTH*RFLPDL
Trigger: CAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTCCTCCTCCCCCACCTaGGTGTGGGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHSSSPT*VWAHGV
Trigger: CACCCCATGGGCCCACACCCAGGTGGGGGAGGAGGA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAAGCCAACAGATGCAGTaGCTTCCTCCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAASQQMQ*LPPPPP
Trigger: AGGTGGGGGAGGAGGAAGCCACTGCATCTGTTGGCT...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCCCCTGGCTGGGCTaGGGCTGCCAAACAACTGTC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRSPWLG*GCQTTV
Trigger: GACAGTTGTTTGGCAGCCCCAGCCCAGCCAGGGGCT...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAAGCCCCTGGCTGGGCTaGGGCTGCCAAACAACTGTC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAESPWLG*GCQTTV
Trigger: GACAGTTGTTTGGCAGCCCCAGCCCAGCCAGGGGCT...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACCCTCCCTGCAGCCTCTaGGCTCCCACAGACAGATGC +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHPPCSL*APTDRC
Trigger: GCATCTGTCTGTGGGAGCCCAGAGGCTGCAGGGAGG...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACAGGCCATGGCTGAGTaGGACTTTGCCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAQAMAE*DFARLS
Trigger: AGACAGCCTGGCAAAGTCCCACTCAGCCATGGCCTG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGGGTCTTGCAGCATGTaGGGGGAGGCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATGSCSM*GEAQAP
Trigger: GGGGGCCTGGGCCTCCCCTCACATGCTGCAAGACCC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGCTGCAGCAGCTGCCGCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTCAGCTGCCGCTTGCGTaGAGTCAGTGGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TAAAAAACVKSVEGLAACQLPLA*SQWRVL
Trigger: CAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTG...ACATGCTGCAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACAGAGTAGGTTCTCTTaGCCCCCTGTCGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEQSRFS*PPVGAV
Trigger: CACTGCCCCGACAGGGGGTCAAGAGAACCTACTCTG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACCAGAGTAGGTTCTCTTaGCCCCCTGTCGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHQSRFS*PPVGAV
Trigger: CACTGCCCCGACAGGGGGTCAAGAGAACCTACTCTG...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGCAAGAAGGGAGACTTaGCCTCTTGGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPARRET*PLGLVT
Trigger: TGTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGC...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGCTTCCAGAGGGCGATaGGTGCAAGGAGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTASRGR*VQGVEV
Trigger: AACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGCAGGGTCTTGTAGACTaGGTCTCGCAGCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQQGLVD*VSQLED
Trigger: GTCTTCCAGCTGCGAGACTCAGTCTACAAGACCCTG...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGATGGTGCCGCTGCTaGAGTTCCGCTTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAGWCRC*SSALSW
Trigger: CCAAGATAAAGCGGAACTTCAGCAGCGGCACCATCC...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGATGGTGCCGCTGCTaGAGTTCCGCTTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGWCRC*SSALSW
Trigger: CCAAGATAAAGCGGAACTTCAGCAGCGGCACCATCC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGATCCTGCGGAAGGTaGTGGGGCACTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGSCGR*WGTSGT
Trigger: TGTCCCTGAAGTGCCCCATCACCTTCCGCAGGATCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGGATCCTGCGGAAGGTaGTGGGGCACTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGGSCGR*WGTSGT
Trigger: TGTCCCTGAAGTGCCCCATCACCTTCCGCAGGATCC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGATCCCCCGCTCACAGTTaGGCTGCAGGTACGACTCCA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRSPAHS*AAGTTP
Trigger: TGGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGA...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACATCCGGCTCCTCCTTaGTGTGCATGTCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAHPAPP*CACQAS
Trigger: TGAAGCCTGACATGCACATCAAGGAGGAGCCGGATG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCATCCGGCTCCTCCTTaGTGTGCATGTCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTHPAPP*CACQAS
Trigger: TGAAGCCTGACATGCACATCAAGGAGGAGCCGGATG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACCATCACGCTGGGCATaGGCACGTGGGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPPSRWA*ARGRGS
Trigger: TGAGCCCCGCCCACGTGCTCATGCCCAGCGTGATGG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGGGTGGTCCCGGGGTaGACTCAGCAAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGVVPG*TQQGLG
Trigger: CCCCAACCCTTGCTGAGTTCACCCCGGGACCACCCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCGCTGGGGGAGGGTTTaGATGGTGCAGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHRWGRV*MVQLGT
Trigger: GGTCCCCAGCTGCACCATTCAAACCCTCCCCCAGCG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAATGGAAGGACAAGGTGTaGGGCTGTGAGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEWKDKV*GCETRG
Trigger: GCCCCTGGTCTCACAGCCTCACACCTTGTCCTTCCA...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPPTGRV*QFLSGT
Trigger: AGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCACAGGCTGGGGCCCTaGGCCAACAGATGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGHRLGP*ANRCSG
Trigger: GCCACTGCATCTGTTGGCTCAGGGCCCCAGCCTGTG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGCTGCTCTGGCTTTCTaGACGCGGCGTCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHAALAF*TRRRQS
Trigger: GCTCTGCCGACGCCGCGTTCAGAAAGCCAGAGCAGC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413916.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACAGGCATCATGGAGCTaGCAGAGGGACTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEQASWS*QRDSLQ
Trigger: CTGCAGGGAGTCCCTCTGGCAGCTCCATGATGCCTG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCCTTCAGCAAACGCCTaGTGTCCCAGGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRPSANA*CPRHCG
Trigger: CCCACAGTGCCTGGGACAGCAGGCGTTTGCTGAAGG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCGCAGCAGCCACAGCTaGAGCAGCTGCCGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHRSSHS*SSCRLR
Trigger: ACGCAAGCGGCAGCTGCTGCAGCTGTGGCTGCTGCG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGGCGGTGGCAGTGGCTaGCGCAGCAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKGGGSG*RSSHSC
Trigger: GCAGCTGTGGCTGCTGCGGCAGCCACTGCCACCGCC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCGGGGACCTCCATGCTaGAGAAACTGGCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPRGPPC*RNWLLK
Trigger: TTTTAACAGCCAGTTTCTGCAGCATGGAGGTCCCCG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGGGTGTCATTCCTGCTaGCCGGGTGGGGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGGCHSC*PGGVHS
Trigger: GCTATGAACCCCACCCGGGCAGCAGGAATGACACCC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGCATACTGGCCTCCTTaGAGATACTGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPAYWPP*RYCCPG
Trigger: TCCAGGGCAGCAGTATCTGCAAGGAGGCCAGTATGC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCGCATACTGGCCTCCTTaGAGATACTGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGAYWPP*RYCCPG
Trigger: TCCAGGGCAGCAGTATCTGCAAGGAGGCCAGTATGC...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGGCATACTGGCCTCCTTaGAGATACTGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQAYWPP*RYCCPG
Trigger: TCCAGGGCAGCAGTATCTGCAAGGAGGCCAGTATGC...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGACTGGGTCATGCCCTaGTGCAGGGGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHDWVMP*CRGSLC
Trigger: GCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGATGTAAGGGACGCTGCTaGTTGGGGTCATGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRCKGRC*LGSWVA
Trigger: CGCCACCCATGACCCCAAGCAGCAGCGTCCCTTACA...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAATGTAAGGGACGCTGCTaGTTGGGGTCATGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAECKGRC*LGSWVA
Trigger: CGCCACCCATGACCCCAAGCAGCAGCGTCCCTTACA...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCGTTGGGCCCAGGGGTaGCAGGGATGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESRWAQG*QGWCRC
Trigger: GCAGCGGCACCATCCCTGGCACCCCTGGGCCCAACG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACGCTCACAGTTGAGCTaGAGGTACGACTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAARSQLS*RYDSRS
Trigger: TGACCTGGAGTCGTACCTGCAGCTCAACTGTGAGCG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCGCTCACAGTTGAGCTaGAGGTACGACTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRERSQLS*RYDSRS
Trigger: TGACCTGGAGTCGTACCTGCAGCTCAACTGTGAGCG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGGGCGGGGCTCACGGTaGGGCAGCGCTTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESGRGSR*GSASVL
Trigger: CAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACAGGTGACCTGCTGGTaGCATCTGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRQVTCW*HLAWEA
Trigger: TGCCTCCCAAGCCAGATGGCACCAGCAGGTCACCTG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGCTTGGCCCAAGGACTaGCGGGACGCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATAWPKD*RDAGGG
Trigger: CCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGCATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTTGGCTGGGCTGGGGCTaGCAAACAACTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAWLGWG*QTTVSV
Trigger: CACTGAGACAGTTGTTTGGCAGCCCCAGCCCAGCCA...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCCCAGCGACAGGACTGTaGGTGCTGCTGCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGPATGL*VLLLLL
Trigger: CAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGG...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTAGCACAGGGCCACGGTaGCCATGCATTCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTSTGPR*PCIPQS
Trigger: TGATTGAGGAATGCATGGGCACCGTGGCCCTGTGCT...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGGGTTCCCCAAAACCTaGCTCTGTGTCGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAGFPKT*LCVALP
Trigger: TGGCAACGCGACACAGAGCCAGGTTTTGGGGAACCC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCTGCAGCAGCTGCCGCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTCCACACCAGGCATCATaGAGCTGCCAGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: TAAAAAACVKSVEGLAACPHQAS*SCQRDS
Trigger: GGAGTCCCTCTGGCAGCTCCATGATGCCTGGTGTGG...ACATGCTGCAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACCCATCGCTCCATACTaGCTCAGCTCCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEPIAPY*LSSWLC
Trigger: GCAGAGCCAGGAGCTGAGCCAGTATGGAGCGATGGG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCCAGGATACCCATGTTaGGGCAGACGCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGPGYPC*GRRCPA
Trigger: TGCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGGGCTGGGCGCAAACTaGGCGGTGCTGGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGGLGAN*AVLGAY
Trigger: GTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTATAATGCAGTCCCGTaGGGCCAGGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRYNAVP*GQARTG
Trigger: CCCTGTCCGTGCCTGGCCCCACGGGACTGCATTATA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCTGGCAGTGGGGAACTaGGATAGCCCGGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRLAVGN*DSPGWN
Trigger: GTTCCATCCCGGGCTATCCCAGTTCCCCACTGCCAG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGGGGTTCCCTGGCAGTaGGGAACTGGGATAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHGVPWQ*GTGIAR
Trigger: CCGGGCTATCCCAGTTCCCCACTGCCAGGGAACCCC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGGGTTCCCTGGCAGTaGGGAACTGGGATAGCCCGG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHGVPWQ*GTGIAR
Trigger: CCGGGCTATCCCAGTTCCCCACTGCCAGGGAACCCC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCGCAGCTGGAAGACATaGTTGCTTACAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHRSWKT*LLTARL
Trigger: CAACCTGGCTGTAAGCAACCATGTCTTCCAGCTGCG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGGCCAGGGTAGTCGCTaGGGGCAGGGACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKGQGSR*GQGLRG
Trigger: CCCCCTCAGTCCCTGCCCCCAGCGACTACCCTGGCC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGATTTGAATGGTGCAGCTaGGGACCTGGAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRFEWCS*GPGGAP
Trigger: TGGGGCCCCTCCAGGTCCCCAGCTGCACCATTCAAA...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTTTGAATGGTGCAGCTaGGGACCTGGAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRFEWCS*GPGGAP
Trigger: TGGGGCCCCTCCAGGTCCCCAGCTGCACCATTCAAA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGGGGGAGGGTTTGAATaGTGCAGCTGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRGGGFE*CSWGPG
Trigger: TCCAGGTCCCCAGCTGCACCATTCAAACCCTCCCCC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACGGCTCCAGACATGCTaGGGGGCCCCATCACGCCTG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAERLQTC*GAPSRL
Trigger: CAGGCGTGATGGGGCCCCCCAGCATGTCTGGAGCCG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGAGCAGGTCCAGAGCTaGTTCTGGGGCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPEQVQS*FWGLPG
Trigger: GCCGGGGAGGCCCCAGAACCAGCTCTGGACCTGCTC...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGAGCAGGTCCAGAGCTaGTTCTGGGGCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEEQVQS*FWGLPG
Trigger: GCCGGGGAGGCCCCAGAACCAGCTCTGGACCTGCTC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGAGCAGGTCCAGAGCTaGTTCTGGGGCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQEQVQS*FWGLPG
Trigger: GCCGGGGAGGCCCCAGAACCAGCTCTGGACCTGCTC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGGTAGCTCATCAGGGTTaGTCAGTTCCGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQVAHQG*SVPGAG
Trigger: ACCTGCTCCCGGAACTGACCAACCCTGATGAGCTAC...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGTAGCTCATCAGGGTTaGTCAGTTCCGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGVAHQG*SVPGAG
Trigger: ACCTGCTCCCGGAACTGACCAACCCTGATGAGCTAC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCGTGAGATGTGTGTGTaGACAAGGCTGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGREMCV*TRLDRA
Trigger: AGCCCTGTCCAGCCTTGTCCACACACACATCTCACG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCGTGAGATGTGTGTGTaGACAAGGCTGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREREMCV*TRLDRA
Trigger: AGCCCTGTCCAGCCTTGTCCACACACACATCTCACG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGGCACAGGGGCCACTaGAGCCAAAGGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGHRGH*SQRPRG
Trigger: TCCCCTGGGCCTTTGGCTCCAGTGGCCCCTGTGCCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCAGGAACATGCTGGCTaGACAGCTGGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGQEHAG*TAGSPL
Trigger: GAGAGGGGAGCCAGCTGTCCAGCCAGCATGTTCCTG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTCCCCCACCTGGGTGTaGGCCCATGGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHSPTWV*AHGVET
Trigger: TGTCTCCACCCCATGGGCCCACACCCAGGTGGGGGA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCCTCCTCCCCCACCTaGGTGTGGGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAESSSPT*VWAHGV
Trigger: CACCCCATGGGCCCACACCCAGGTGGGGGAGGAGGA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGATCCAGAGCTCAACCTaGGGCCCCAAAAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQIQSST*GPKSHL
Trigger: CAAGTGGCTTTTGGGGCCCCAGGTTGAGCTCTGGAT...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGGAATAGCCGAGCCTTaGCTTGAAACATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRGIAEP*LETSRA
Trigger: AGCTCTGGATGTTTCAAGCCAAGGCTCGGCTATTCC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGACCTCTTGGTTTGGTaGCATGTAAGGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTDLLVW*HVRDAA
Trigger: AGCAGCGTCCCTTACATGTCACCAAACCAAGAGGTC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCGACCTCTTGGTTTGGTaGCATGTAAGGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGDLLVW*HVRDAA
Trigger: AGCAGCGTCCCTTACATGTCACCAAACCAAGAGGTC...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCTCCGCTTTATCTTGGTaGTGCAGTGCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGSALSW*CSAQQA
Trigger: TGCCTGCTGAGCACTGCATCACCAAGATAAAGCGGA...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGGGATGGTGCCGCTGCTaGAGTTCCGCTTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVGWCRC*SSALSW
Trigger: CCAAGATAAAGCGGAACTTCAGCAGCGGCACCATCC...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGGGGTGGTCCCGGGGTaGACTCAGCAAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESGVVPG*TQQGLG
Trigger: CCCCAACCCTTGCTGAGTTCACCCCGGGACCACCCC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACGCTGGGGGAGGGTTTaGATGGTGCAGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPRWGRV*MVQLGT
Trigger: GGTCCCCAGCTGCACCATTCAAACCCTCCCCCAGCG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTTTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTLEVPP*SVCTWE
Trigger: TTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAA...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGACTGGAGGAAATGGTaGCCCGGACCCCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHDWRKW*PGPPPS
Trigger: GCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAGTC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGCCAGAGGGACTCCCTaGAGGGCCCATGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESARGTP*RAHGVP
Trigger: GGGAACCCCATGGGCCCTGCAGGGAGTCCCTCTGGC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAAGGTCAAGGCGGAGCTaGCCCCTGCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQRSRRS*PLPHQA
Trigger: TGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCT...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACGCAGCAGCCACAGCTaGAGCAGCTGCCGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQRSSHS*SSCRLR
Trigger: ACGCAAGCGGCAGCTGCTGCAGCTGTGGCTGCTGCG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACCCCGGGGACCTCCATaGTGCAGAAACTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEPRGPP*CRNWLL
Trigger: TAACAGCCAGTTTCTGCAGCATGGAGGTCCCCGGGG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACCCCGGGGACCTCCATaGTGCAGAAACTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRPRGPP*CRNWLL
Trigger: TAACAGCCAGTTTCTGCAGCATGGAGGTCCCCGGGG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCCTTGCAGATACTGCTaGCCTGGATACACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREPCRYC*PGYTSE
Trigger: CTCTGAGGTGTATCCAGGGCAGCAGTATCTGCAAGG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCCCTTGCAGATACTGCTaGCCTGGATACACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGPCRYC*PGYTSE
Trigger: CTCTGAGGTGTATCCAGGGCAGCAGTATCTGCAAGG...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGCGCAAACTGGGCGGTaGTGGGTGCATACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHAQTGR*WVHTGL
Trigger: GAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACCAGAGGGCGATGAGTaGAAGGAGTTGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRPEGDE*KELRLG
Trigger: GCCCAACCTCAACTCCTTGCACTCATCGCCCTCTGG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAATCTTGGTGATGCAGTaGTCAGCAGGCAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEILVMQ*SAGRRR
Trigger: GCGCCTCCTGCCTGCTGAGCACTGCATCACCAAGAT...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGACCTTGATAGCTGTCTaGTCCACCCCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGTLIAV*STPSSP
Trigger: CGGAGAGGACGGGGTGGAGCAGACAGCTATCAAGGT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCGCTCACAGTTGAGCTaGAGGTACGACTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEARSQLS*RYDSRS
Trigger: TGACCTGGAGTCGTACCTGCAGCTCAACTGTGAGCG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGGGTCCAGGTGACCTaGTGGTGCCATCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHGVQVT*WCHLAW
Trigger: CCAAGCCAGATGGCACCAGCAGGTCACCTGGACCCC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGGGGTCCAGGTGACCTaGTGGTGCCATCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHGVQVT*WCHLAW
Trigger: CCAAGCCAGATGGCACCAGCAGGTCACCTGGACCCC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPQQKPF*SSRLGR
Trigger: TCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAGGCCCCCAAGAGGCTaGCATTCAGCGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGRPPRG*HSARFQ
Trigger: TTGGAACCTCGCTGAATGGCAGCCTCTTGGGGGCCT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGAGGGCCTGGGGCCTaGATCAGGCCATGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGGPGA*IRPWLS
Trigger: ACTCAGCCATGGCCTGATGCAGGCCCCAGGCCCTCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACGGAGTTCATTGGCAATaGAGCAGCCTACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHGVHWQ*SSLQAG
Trigger: CCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCC...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGTTCATGGAGTTCATTaGCAATGGAGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRVHGVH*QWSSLQ
Trigger: CTGTAGGCTGCTCCATTGCCAATGAACTCCATGAAC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTGAGGGGAGGCCCAGGCCCGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: ACVKSVEGLAACEGRPRPAGQVS*GSWSSL
Trigger: CAATGAACTCCATGAACCCCATGAAACCTGCCCTGC...GGGCCTGGGCCTCCCCTCACATGCTGCAAGACCCTCCACTGACTTCACGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAATCCAGCCGGCTGAGTaGCGCTTTGTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRIQPAE*RFVAKA
Trigger: TGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGAT...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCAGATACTGCTGCCCTaGATACACCTCAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHQILLP*IHLRVG
Trigger: ACCTACTCTGAGGTGTATCCAGGGCAGCAGTATCTG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCAAACTGGGCGGTGCTaGGTGCATACTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRQTGRC*VHTGLL
Trigger: AAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGGCTGGGCGCAAACTaGGCGGTGCTGGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGLGAN*AVLGAY
Trigger: GTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGCACGGACAGGGACTaGGTCATGCCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGTDRD*VMPCCR
Trigger: CCTGCAGCAGGGCATGACCCAGTCCCTGTCCGTGCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACGGGGTTCCCTGGCAGTaGGGAACTGGGATAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDGVPWQ*GTGIAR
Trigger: CCGGGCTATCCCAGTTCCCCACTGCCAGGGAACCCC...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAAGGGACGCTGCTGCTTaGGGTCATGGGTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPRDAAA*GHGWRG
Trigger: CCCACGCCACCCATGACCCCAAGCAGCAGCGTCCCT...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCGCAGCTGGAAGACATaGTTGCTTACAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRERSWKT*LLTARL
Trigger: CAACCTGGCTGTAAGCAACCATGTCTTCCAGCTGCG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCACTGAGTCTCGCAGCTaGAAGACATGGTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGTESRS*KTWLLT
Trigger: TGTAAGCAACCATGTCTTCCAGCTGCGAGACTCAGT...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAACTGAGTCTCGCAGCTaGAAGACATGGTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRTESRS*KTWLLT
Trigger: TGTAAGCAACCATGTCTTCCAGCTGCGAGACTCAGT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCTCGGGCAGGGAGCTaGATCCTGCGGAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHPRAGS*ILRKVM
Trigger: CATCACCTTCCGCAGGATCCAGCTCCCTGCCCGAGG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGCAGCGCTTCAGTGCTaGCCCATCCGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGAALQC*PIRLLL
Trigger: AAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCCCAGGAAGCTaGAACCCTGGCCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGQAPGS*NPGQGS
Trigger: ACTACCCTGGCCAGGGTTCCAGCTTCCTGGGGCCTG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCAGGCCCCAGGAAGCTaGAACCCTGGCCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHQAPGS*NPGQGS
Trigger: ACTACCCTGGCCAGGGTTCCAGCTTCCTGGGGCCTG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGAACTCAGCAAGGGTTaGGGTGCTGGGCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGELSKG*GAGRGG
Trigger: CCCACCACGCCCAGCACCCCAACCCTTGCTGAGTTC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAAAGTCAGGAGGCTGCTaGGAATGTCAGACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPKSGGC*ECQTGR
Trigger: CCTACCAGTCTGACATTCCCAGCAGCCTCCTGACTT...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGTGGTGCCATCTGGCTTaGGAGGCAGGCGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGWCHLA*EAGGRL
Trigger: AAGTCTACCGCCTGCCTCCCAAGCCAGATGGCACCA...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCTGCTGGTGCCATCTaGCTTGGGAGGCAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHPAGAI*LGRQAV
Trigger: TACCGCCTGCCTCCCAAGCCAGATGGCACCAGCAGG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGCCTGCTGGTGCCATCTaGCTTGGGAGGCAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGPAGAI*LGRQAV
Trigger: TACCGCCTGCCTCCCAAGCCAGATGGCACCAGCAGG...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGCAGGTCCAGAGCTaGTTCTGGGGCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESEQVQS*FWGLPG
Trigger: GCCGGGGAGGCCCCAGAACCAGCTCTGGACCTGCTC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGTGTCCCCGCCGGGCTTaGGGTAAACACAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGCPRRA*GKHRIS
Trigger: ACTGATCCTGTGTTTACCCCAAGCCCGGCGGGGACA...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTGTCCCCGCCGGGCTTaGGGTAAACACAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRCPRRA*GKHRIS
Trigger: ACTGATCCTGTGTTTACCCCAAGCCCGGCGGGGACA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACTGTCCCCGCCGGGCTTaGGGTAAACACAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHCPRRA*GKHRIS
Trigger: ACTGATCCTGTGTTTACCCCAAGCCCGGCGGGGACA...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGACAAGAAGCAGGCTaGGTGGGGGCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGQEAG*VGAGRG
Trigger: ACCCCTGCCTGCCCCCACCCAGCCTGCTTCTTGTCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHCLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRCLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTCCTCCTCCCCCACCTaGGTGTGGGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESSSSPT*VWAHGV
Trigger: CACCCCATGGGCCCACACCCAGGTGGGGGAGGAGGA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCCAACAGATGCAGTaGCTTCCTCCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRSQQMQ*LPPPPP
Trigger: AGGTGGGGGAGGAGGAAGCCACTGCATCTGTTGGCT...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCTGCTCGCACAGGCTaGGGCCCTGAGCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHPARTG*GPEPTD
Trigger: ATCTGTTGGCTCAGGGCCCCAGCCTGTGCGAGCAGG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGTCTTGCCTCTCCTGCTaGCTGGCTGGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGSCLSC*LAGKAL
Trigger: GAGGGCCTTCCCAGCCAGCCAGCAGGAGAGGCAAGA...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CACAGCTGCAGCAGCTGCCGCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGAGACTCATATGCGAATaGACCATCACCGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HSCSSCRLREVSGGSCSMRLICE*TITVWR
Trigger: GCGCCACACGGTGATGGTTCATTCGCATATGAGTCT...CATGCTGCAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR TCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGSDPAG*VALCCQ
Trigger: TTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCT...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCAGCTGCCGCTTGCGTaGAGTCAGTGGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHQLPLA*SQWRVL
Trigger: CAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCAGAGTAGGTTCTCTTaGCCCCCTGTCGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHQSRFS*PPVGAV
Trigger: CACTGCCCCGACAGGGGGTCAAGAGAACCTACTCTG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGCTTCCAGAGGGCGATaGGTGCAAGGAGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGASRGR*VQGVEV
Trigger: AACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGGATGGTGCCGCTGCTaGAGTTCCGCTTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGGWCRC*SSALSW
Trigger: CCAAGATAAAGCGGAACTTCAGCAGCGGCACCATCC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTCCCCCGCTCACAGTTaGGCTGCAGGTACGACTCCA +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHSPAHS*AAGTTP
Trigger: TGGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCATCCGGCTCCTCCTTaGTGTGCATGTCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGHPAPP*CACQAS
Trigger: TGAAGCCTGACATGCACATCAAGGAGGAGCCGGATG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGTTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAA +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVLEVPP*SVCTWE
Trigger: TTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAA...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp GCCACAGCTGCAGCAGCTGCCGCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCACCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: ATAAAAAACVKSVEGLAAPTGRV*QFLSGT
Trigger: AGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGG...TGCTGCAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTGGCGCCCTGCCCGTTaGACTGCTCTGTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHWRPAR*TALWAY
Trigger: ATAAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAAGCCGAGCCTTGGCTTaGAACATCCAGAGCTCAACC +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAESRALA*NIQSST
Trigger: GGTTGAGCTCTGGATGTTTCAAGCCAAGGCTCGGCT...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGGCGGAGCTGCCCCCTaGCACACCAGGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKGGAAP*HTRHHG
Trigger: TCCATGATGCCTGGTGTGGCAGGGGGCAGCTCCGCC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCCTTCAGCAAACGCCTaGTGTCCCAGGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGPSANA*CPRHCG
Trigger: CCCACAGTGCCTGGGACAGCAGGCGTTTGCTGAAGG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCTTCAGCAAACGCCTaGTGTCCCAGGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHPSANA*CPRHCG
Trigger: CCCACAGTGCCTGGGACAGCAGGCGTTTGCTGAAGG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGCGGGGACCTCCATGCTaGAGAAACTGGCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQRGPPC*RNWLLK
Trigger: TTTTAACAGCCAGTTTCTGCAGCATGGAGGTCCCCG...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACGGGGACCTCCATGCTaGAGAAACTGGCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPRGPPC*RNWLLK
Trigger: TTTTAACAGCCAGTTTCTGCAGCATGGAGGTCCCCG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACGGGGACCTCCATGCTaGAGAAACTGGCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAARGPPC*RNWLLK
Trigger: TTTTAACAGCCAGTTTCTGCAGCATGGAGGTCCCCG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCATACTGGCCTCCTTaGAGATACTGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEAYWPP*RYCCPG
Trigger: TCCAGGGCAGCAGTATCTGCAAGGAGGCCAGTATGC...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGCATACTGGCCTCCTTaGAGATACTGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGAYWPP*RYCCPG
Trigger: TCCAGGGCAGCAGTATCTGCAAGGAGGCCAGTATGC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACTGGGCGGTGCTGGGTaGATACTGGCCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAELGGAG*ILASLQ
Trigger: CTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCTGTAAGGGACGCTGCTaGTTGGGGTCATGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGCKGRC*LGSWVA
Trigger: CGCCACCCATGACCCCAAGCAGCAGCGTCCCTTACA...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACTGTAAGGGACGCTGCTaGTTGGGGTCATGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHCKGRC*LGSWVA
Trigger: CGCCACCCATGACCCCAAGCAGCAGCGTCCCTTACA...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGACATGTAAGGGACGCTaGTGCTTGGGGTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGTCKGR*CLGSWV
Trigger: CACCCATGACCCCAAGCAGCAGCGTCCCTTACATGT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGACATGTAAGGGACGCTaGTGCTTGGGGTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRTCKGR*CLGSWV
Trigger: CACCCATGACCCCAAGCAGCAGCGTCCCTTACATGT...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACGCTCACAGTTGAGCTaGAGGTACGACTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRRSQLS*RYDSRS
Trigger: TGACCTGGAGTCGTACCTGCAGCTCAACTGTGAGCG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAGAATGTAAATCAGGATaGCCAGCATGTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRECKSG*PACTGP
Trigger: TGGACCAGTACATGCTGGGCATCCTGATTTACATTC...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGGGTCCAGGTGACCTaGTGGTGCCATCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGVQVT*WCHLAW
Trigger: CCAAGCCAGATGGCACCAGCAGGTCACCTGGACCCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTAAACAGAAGGATCAATaGTGGACAAGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPKQKDQ*WTRSRL
Trigger: CAGCCTGCTTCTTGTCCAGCATTGATCCTTCTGTTT...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGCCAGCCCTGCCAGATaGCCAGCTCTGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKASPAR*PALPSG
Trigger: TCCACTGGGCAGAGCTGGGCATCTGGCAGGGCTGGC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTAAACAACTGTCTCAGTaGCCCAGGGCAAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAKQLSQ*PRASPD
Trigger: ATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTT...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGACTGTGCGTGCTGCTaGTTCTTTTGTTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTDCACC*FFCFLH
Trigger: GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACGACAGGACTGTGCGTaGTGCTGCTTCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPRQDCA*CCFFCF
Trigger: GAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACGACAGGACTGTGCGTaGTGCTGCTTCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAARQDCA*CCFFCF
Trigger: GAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACCAGCGACAGGACTGTaGGTGCTGCTGCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRPATGL*VLLLLL
Trigger: CAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCGGGAGCATCACGTTTaGAACAGGCAGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGREHHV*NRQGRW
Trigger: CCACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACAGCACAGGGCCACGGTaGCCATGCATTCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHSTGPR*PCIPQS
Trigger: TGATTGAGGAATGCATGGGCACCGTGGCCCTGTGCT...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGCCAGGATACCCATGTTaGGGCAGACGCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGPGYPC*GRRCPA
Trigger: TGCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGG...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACAGATACTGCTGCCCTaGATACACCTCAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPQILLP*IHLRVG
Trigger: ACCTACTCTGAGGTGTATCCAGGGCAGCAGTATCTG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCAGATACTGCTGCCCTaGATACACCTCAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGQILLP*IHLRVG
Trigger: ACCTACTCTGAGGTGTATCCAGGGCAGCAGTATCTG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGTGCTGGGTGCATACTaGCCTCCTTGCAGATACTGC +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRVLGAY*PPCRYC
Trigger: GCAGTATCTGCAAGGAGGCCAGTATGCACCCAGCAC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCTGGCAGTGGGGAACTaGGATAGCCCGGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGLAVGN*DSPGWN
Trigger: GTTCCATCCCGGGCTATCCCAGTTCCCCACTGCCAG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCTGGCGTGGGGTTCCCTaGCAGTGGGGAACTGGGATA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGWRGVP*QWGTGI
Trigger: TATCCCAGTTCCCCACTGCCAGGGAACCCCACGCCA...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCGCAGCTGGAAGACATaGTTGCTTACAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEARSWKT*LLTARL
Trigger: CAACCTGGCTGTAAGCAACCATGTCTTCCAGCTGCG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACCTCGGGCAGGGAGCTaGATCCTGCGGAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPPRAGS*ILRKVM
Trigger: CATCACCTTCCGCAGGATCCAGCTCCCTGCCCGAGG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAAGGCTTCACGGGCACTaGCTTCCAGCTGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAERLHGH*LPAARG
Trigger: CCCACGTGCAGCTGGAAGCCAGTGCCCGTGAAGCCT...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACAGGCCCCAGGAAGCTaGAACCCTGGCCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQQAPGS*NPGQGS
Trigger: ACTACCCTGGCCAGGGTTCCAGCTTCCTGGGGCCTG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGTCCAGGTGACCTGCTaGTGCCATCTGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHVQVTC*CHLAWE
Trigger: CTCCCAAGCCAGATGGCACCAGCAGGTCACCTGGAC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGAGGGGCCCCAAGGTTaGAGGTGTGTAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHEGPQG*RCVVLV
Trigger: CACCAGGACTACACACCTCCAACCTTGGGGCCCCTC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGAGGGGCCCCAAGGTTaGAGGTGTGTAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHEGPQG*RCVVLV
Trigger: CACCAGGACTACACACCTCCAACCTTGGGGCCCCTC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACTTTGAATGGTGCAGCTaGGGACCTGGAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHFEWCS*GPGGAP
Trigger: TGGGGCCCCTCCAGGTCCCCAGCTGCACCATTCAAA...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGGGGGAGGGTTTGAATaGTGCAGCTGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGGGGFE*CSWGPG
Trigger: TCCAGGTCCCCAGCTGCACCATTCAAACCCTCCCCC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGGGGAGGGTTTGAATaGTGCAGCTGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHGGGFE*CSWGPG
Trigger: TCCAGGTCCCCAGCTGCACCATTCAAACCCTCCCCC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGGTCCTAAGCTCGCTTaGCCCAAGGACTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPGPKLA*PKDCRD
Trigger: GTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACC...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCAGAAGGATCAATGCTaGACAAGAAGCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREQKDQC*TRSRLG
Trigger: ACCCAGCCTGCTTCTTGTCCAGCATTGATCCTTCTG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCAGAAGGATCAATGCTaGACAAGAAGCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTQKDQC*TRSRLG
Trigger: ACCCAGCCTGCTTCTTGTCCAGCATTGATCCTTCTG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTCCCCCACCTGGGTGTaGGCCCATGGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESSPTWV*AHGVET
Trigger: TGTCTCCACCCCATGGGCCCACACCCAGGTGGGGGA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACCTGCTCGCACAGGCTaGGGCCCTGAGCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPPARTG*GPEPTD
Trigger: ATCTGTTGGCTCAGGGCCCCAGCCTGTGCGAGCAGG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACTCCTGCTGGCTGGCTaGGAAGGCCCTCAAGGATGG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQLLLAG*EGPQGW
Trigger: CCATCCTTGAGGGCCTTCCCAGCCAGCCAGCAGGAG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAATCTTGCCTCTCCTGCTaGCTGGCTGGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQSCLSC*LAGKAL
Trigger: GAGGGCCTTCCCAGCCAGCCAGCAGGAGAGGCAAGA...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACCTCCCTGCAGCCTCTaGGCTCCCACAGACAGATGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEPPCSL*APTDRC
Trigger: GCATCTGTCTGTGGGAGCCCAGAGGCTGCAGGGAGG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCTGAGGATGGGCTTCTaGGTTGTTTGCAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTLRMGF*VVCSLL
Trigger: CAAAAGGCTGCAAACAACCCAGAAGCCCATCCTCAG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAAGACTCATATGCGAATaGACCATCACCGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRRLICE*TITVWR
Trigger: GCGCCACACGGTGATGGTTCATTCGCATATGAGTCT...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAESDPAG*VALCCQ
Trigger: TTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCT...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACCAGCTGCCGCTTGCGTaGAGTCAGTGGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDQLPLA*SQWRVL
Trigger: CAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTG...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGCAAGAAGGGAGACTTaGCCTCTTGGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAARRET*PLGLVT
Trigger: TGTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGATCCGCTTTATCTTGGTaGTGCAGTGCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRSALSW*CSAQQA
Trigger: TGCCTGCTGAGCACTGCATCACCAAGATAAAGCGGA...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAATCCGCTTTATCTTGGTaGTGCAGTGCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAESALSW*CSAQQA
Trigger: TGCCTGCTGAGCACTGCATCACCAAGATAAAGCGGA...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGTCCGCTTTATCTTGGTaGTGCAGTGCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGSALSW*CSAQQA
Trigger: TGCCTGCTGAGCACTGCATCACCAAGATAAAGCGGA...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGATCCTGCGGAAGGTaGTGGGGCACTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGSCGR*WGTSGT
Trigger: TGTCCCTGAAGTGCCCCATCACCTTCCGCAGGATCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCCCCCGCTCACAGTTaGGCTGCAGGTACGACTCCA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAESPAHS*AAGTTP
Trigger: TGGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGTTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGLEVPP*SVCTWE
Trigger: TTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAA...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACAAGCCCAGATAAGGTaGCATAGTGGCAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAQAQIR*HSGKCL
Trigger: GAGACATTTGCCACTATGTCACCTTATCTGGGCTTG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGCAATCTCTGGGAAGTaGCAAGCAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHAISGK*QAEASQ
Trigger: CTGGGAGGCCTCTGCTTGTCACTTCCCAGAGATTGC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCTCTGAGAGGTGTTTGTaGTGGAGCACAGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGSERCL*WSTGPR
Trigger: CCGTGGCCCTGTGCTCCATCACAAACACCTCTCAGA...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGGTGTCATTCCTGCTaGCCGGGTGGGGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGCHSC*PGGVHS
Trigger: GCTATGAACCCCACCCGGGCAGCAGGAATGACACCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGGGTGTCATTCCTGCTaGCCGGGTGGGGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQGCHSC*PGGVHS
Trigger: GCTATGAACCCCACCCGGGCAGCAGGAATGACACCC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAAGGGTGTCATTCCTaGTGCCCGGGTGGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGQGCHS*CPGGVH
Trigger: ATGAACCCCACCCGGGCAGCAGGAATGACACCCTTG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGACCTCCTTGCAGATACTaGTGCCCTGGATACACCTCA +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRPPCRY*CPGYTS
Trigger: TGAGGTGTATCCAGGGCAGCAGTATCTGCAAGGAGG...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACCTCCTTGCAGATACTaGTGCCCTGGATACACCTCA +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEPPCRY*CPGYTS
Trigger: TGAGGTGTATCCAGGGCAGCAGTATCTGCAAGGAGG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACACCTTGATAGCTGTCTaGTCCACCCCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHTLIAV*STPSSP
Trigger: CGGAGAGGACGGGGTGGAGCAGACAGCTATCAAGGT...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGAATGTAAATCAGGATaGCCAGCATGTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHECKSG*PACTGP
Trigger: TGGACCAGTACATGCTGGGCATCCTGATTTACATTC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACGGAGGGTTTGAATGGTaGAGCTGGGGACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDGGFEW*SWGPGG
Trigger: CCCTCCAGGTCCCCAGCTGCACCATTCAAACCCTCC...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACTTGAAGCTGGCGCCCTaGCCGTTGAACTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHLKLAP*PLNCSV
Trigger: CACAGAGCAGTTCAACGGGCAGGGCGCCAGCTTCAA...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACGTCCTGCACAAGCTTTaGAGGCACAGCCCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHVLHKL*RHSPSF
Trigger: AAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGAC...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGCTCCCACAGACAGATaGCCTCCTCTAGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHAPTDR*PPLVPP
Trigger: TGGAGGCACTAGAGGAGGGCATCTGTCTGTGGGAGC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGGCTTCTGGGTTGTTTaGAGCCTTTTGCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAGFWVV*SLLLVP
Trigger: TGGGACAAGCAAAAGGCTGCAAACAACCCAGAAGCC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGGGCCACGGTGCCCATaGATTCCTCAATCATTTCTC +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGGPRCP*IPQSFL
Trigger: GAGAAATGATTGAGGAATGCATGGGCACCGTGGCCC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGAGTTCATTGGCAATaGAGCAGCCTACAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHGVHWQ*SSLQAG
Trigger: CCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCGTTCATGGAGTTCATTaGCAATGGAGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGVHGVH*QWSSLQ
Trigger: CTGTAGGCTGCTCCATTGCCAATGAACTCCATGAAC...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGTTCATGGAGTTCATTaGCAATGGAGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: TRLAARSPCWRRLQQTPAVHGVH*QWSSLQ
Trigger: CTGTAGGCTGCTCCATTGCCAATGAACTCCATGAAC...AGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp GCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTGAGGGGAGGCCCAGGCCCGTTTCATGGGGTTCATaGAGTTCATTGGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: ACVKSVEGLAACEGRPRPVSWGS*SSLAME
Trigger: CTCCATTGCCAATGAACTCCATGAACCCCATGAAAC...GGGCCTGGGCCTCCCCTCACATGCTGCAAGACCCTCCACTGACTTCACGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAAGQVS*GSWSSL
Trigger: CAATGAACTCCATGAACCCCATGAAACCTGCCCTGC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACATCCAGCCGGCTGAGTaGCGCTTTGTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHIQPAE*RFVAKA
Trigger: TGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGAT...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACCCATCGCTCCATACTaGCTCAGCTCCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEPIAPY*LSSWLC
Trigger: GCAGAGCCAGGAGCTGAGCCAGTATGGAGCGATGGG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACCATGCTGCAGAAACTaGCTGTTAAAAGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAPCCRN*LLKDCP
Trigger: CGGACAGTCTTTTAACAGCCAGTTTCTGCAGCATGG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACCAGGATACCCATGTTaGGGCAGACGCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEPGYPC*GRRCPA
Trigger: TGCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTACTGAGTCTCGCAGCTaGAAGACATGGTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTTESRS*KTWLLT
Trigger: TGTAAGCAACCATGTCTTCCAGCTGCGAGACTCAGT...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGAGGCTTCACGGGCACTaGCTTCCAGCTGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKRLHGH*LPAARG
Trigger: CCCACGTGCAGCTGGAAGCCAGTGCCCGTGAAGCCT...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGAACTCAGCAAGGGTTaGGGTGCTGGGCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKELSKG*GAGRGG
Trigger: CCCACCACGCCCAGCACCCCAACCCTTGCTGAGTTC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGTCAGGAGGCTGCTaGGAATGTCAGACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGKSGGC*ECQTGR
Trigger: CCTACCAGTCTGACATTCCCAGCAGCCTCCTGACTT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCTGGTGCCATCTGGCTTaGGAGGCAGGCGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGWCHLA*EAGGRL
Trigger: AAGTCTACCGCCTGCCTCCCAAGCCAGATGGCACCA...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTGGTGCCATCTGGCTTaGGAGGCAGGCGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHWCHLA*EAGGRL
Trigger: AAGTCTACCGCCTGCCTCCCAAGCCAGATGGCACCA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCCTGCTGGTGCCATCTaGCTTGGGAGGCAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESPAGAI*LGRQAV
Trigger: TACCGCCTGCCTCCCAAGCCAGATGGCACCAGCAGG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGTCCAGGTGACCTGCTaGTGCCATCTGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEVQVTC*CHLAWE
Trigger: CTCCCAAGCCAGATGGCACCAGCAGGTCACCTGGAC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGAGGGGCCCCAAGGTTaGAGGTGTGTAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEEGPQG*RCVVLV
Trigger: CACCAGGACTACACACCTCCAACCTTGGGGCCCCTC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGAGGGGCCCCAAGGTTaGAGGTGTGTAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQEGPQG*RCVVLV
Trigger: CACCAGGACTACACACCTCCAACCTTGGGGCCCCTC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCCTTGGCAGAGGGAGGTaGCAAGGGCTGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSLGRGR*QGLPAW
Trigger: CCAGGCCGGCAGCCCTTGCCACCTCCCTCTGCCAAG...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTGCTTGAAGCTGGGGTaGGGAGAGGAACCTGACACC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHCLKLG*GEEPDT
Trigger: GGTGTCAGGTTCCTCTCCCCACCCCAGCTTCAAGCA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACTCTCCTGGGCAAGCCTaGGATGCTTCACAAAACAGC +
Preference number: 4 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHSPGQA*DASQNS
Trigger: GCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGA...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGCCTGCATCAGGCCATaGCTGAGTGGGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGACIRP*LSGTLP
Trigger: TGGCAAAGTCCCACTCAGCCATGGCCTGATGCAGGC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGCCTGCATCAGGCCATaGCTGAGTGGGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHACIRP*LSGTLP
Trigger: TGGCAAAGTCCCACTCAGCCATGGCCTGATGCAGGC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACAAGAAAGGAGGGCCTaGGGCCTGCATCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEQERRA*GLHQAM
Trigger: CATGGCCTGATGCAGGCCCCAGGCCCTCCTTTCTTG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATGCTGTCCCAGGCACTaGCTCTGTGTCGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAECCPRH*LCVALP
Trigger: TGGCAACGCGACACAGAGCCAGTGCCTGGGACAGCA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413916.5
ENST00000433667.5
3UTR CAA 72 bp CTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTaGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LLVSPLHPGASR*QQAGQVVHQMS
Trigger: GGACATCTGATGCACCACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCAGCTGCCGCTTGCGTaGAGTCAGTGGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESQLPLA*SQWRVL
Trigger: CAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGGCAAGAAGGGAGACTTaGCCTCTTGGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGARRET*PLGLVT
Trigger: TGTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGC...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCATCCGGCTCCTCCTTaGTGTGCATGTCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGHPAPP*CACQAS
Trigger: TGAAGCCTGACATGCACATCAAGGAGGAGCCGGATG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCAAGGTGTGAGGCTGTaGGACCAGGGGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESQGVRL*DQGREM
Trigger: CATCTCACGCCCCTGGTCTCACAGCCTCACACCTTG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTGGAAGGACAAGGTGTaGGGCTGTGAGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESWKDKV*GCETRG
Trigger: GCCCCTGGTCTCACAGCCTCACACCTTGTCCTTCCA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEPTGRV*QFLSGT
Trigger: AGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACAAACAGCTCTTCAGCTaGAGCCAACTTGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: HRAESESPPTHLGQAEAHKQLFS*SQLGKF
Trigger: GAATTTTCCAAGTTGGCTTCAGCTGAAGAGCTGTTT...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAATTTCTCCAGTCTTCTaGGGATGGGCTTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEISPVF*GWASGL
Trigger: CAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAAT...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGGGTGTCATTCCTGCTaGCCGGGTGGGGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESGCHSC*PGGVHS
Trigger: GCTATGAACCCCACCCGGGCAGCAGGAATGACACCC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACAAGGGTGTCATTCCTaGTGCCCGGGTGGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQQGCHS*CPGGVH
Trigger: ATGAACCCCACCCGGGCAGCAGGAATGACACCCTTG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACACATGTAAGGGACGCTaGTGCTTGGGGTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHTCKGR*CLGSWV
Trigger: CACCCATGACCCCAAGCAGCAGCGTCCCTTACATGT...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACCAGAGGGCGATGAGTaGAAGGAGTTGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPPEGDE*KELRLG
Trigger: GCCCAACCTCAACTCCTTGCACTCATCGCCCTCTGG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAATCTTGGTGATGCAGTaGTCAGCAGGCAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQILVMQ*SAGRRR
Trigger: GCGCCTCCTGCCTGCTGAGCACTGCATCACCAAGAT...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAACCTTGATAGCTGTCTaGTCCACCCCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAETLIAV*STPSSP
Trigger: CGGAGAGGACGGGGTGGAGCAGACAGCTATCAAGGT...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAACCTTGATAGCTGTCTaGTCCACCCCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPTLIAV*STPSSP
Trigger: CGGAGAGGACGGGGTGGAGCAGACAGCTATCAAGGT...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGAATGTAAATCAGGATaGCCAGCATGTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTECKSG*PACTGP
Trigger: TGGACCAGTACATGCTGGGCATCCTGATTTACATTC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACATCGAGCACAGGGCTaGTTCCAATTCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEHRAQG*FQFRGR
Trigger: CCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAAAACAGAAGGATCAATaGTGGACAAGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPKQKDQ*WTRSRL
Trigger: CAGCCTGCTTCTTGTCCAGCATTGATCCTTCTGTTT...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACCAGATGCCCAGCTCTaGCCAGTGGAGGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEPDAQL*PVEELL
Trigger: CAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACCAGATGCCCAGCTCTaGCCAGTGGAGGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQPDAQL*PVEELL
Trigger: CAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACAGGCCCCCAAGAGGCTaGCATTCAGCGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDRPPRG*HSARFQ
Trigger: TTGGAACCTCGCTGAATGGCAGCCTCTTGGGGGCCT...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACATATCTGGAACTCAGCTaGTCTGGCTCCGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATYLELS*SGSARP
Trigger: AGGCCGGGCGGAGCCAGAGCAGCTGAGTTCCAGATA...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309315.9
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATTGAAGCTGGCGCCCTaGCCGTTGAACTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAELKLAP*PLNCSV
Trigger: CACAGAGCAGTTCAACGGGCAGGGCGCCAGCTTCAA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAATGGCTGGGCTGGGGCTaGCAAACAACTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQWLGWG*QTTVSV
Trigger: CACTGAGACAGTTGTTTGGCAGCCCCAGCCCAGCCA...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGCTCCCACAGACAGATaGCCTCCTCTAGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPAPTDR*PPLVPP
Trigger: TGGAGGCACTAGAGGAGGGCATCTGTCTGTGGGAGC...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGTATCTGGAACTCAGCTaGTCTGGCTTTCTGAACGCG +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGYLELS*SGFLNA
Trigger: CGCGTTCAGAAAGCCAGAGCAGCTGAGTTCCAGATA...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413916.5
CDS-3UTR GCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCCTTCAGCAAACGCCTaGTGTCCCAGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESPSANA*CPRHWL
Trigger: GAGCCAGTGCCTGGGACAGCAGGCGTTTGCTGAAGG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413916.5
ENST00000433667.5
CDS-3UTR CCA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGTTTCATGGGGTTCATaGAGTTCATTGGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAVSWGS*SSLAME
Trigger: CTCCATTGCCAATGAACTCCATGAACCCCATGAAAC...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGTTTCATGGGGTTCATaGAGTTCATTGGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREVSWGS*SSLAME
Trigger: CTCCATTGCCAATGAACTCCATGAACCCCATGAAAC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRAGQVS*GSWSSL
Trigger: CAATGAACTCCATGAACCCCATGAAACCTGCCCTGC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAATCCAGCCGGCTGAGTaGCGCTTTGTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEIQPAE*RFVAKA
Trigger: TGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGAT...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACATCCAGCCGGCTGAGTaGCGCTTTGTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDIQPAE*RFVAKA
Trigger: TGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGAT...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACGGGTTCCCCAAAACCTaGCTCTGTGTCGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDGFPKT*LCVALP
Trigger: TGGCAACGCGACACAGAGCCAGGTTTTGGGGAACCC...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCCCATCGCTCCATACTaGCTCAGCTCCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESPIAPY*LSSWLC
Trigger: GCAGAGCCAGGAGCTGAGCCAGTATGGAGCGATGGG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGGATACCCATGTTaGGGCAGACGCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKPGYPC*GRRCPA
Trigger: TGCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGG...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGCAGATACTGCTGCCCTaGATACACCTCAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRQILLP*IHLRVG
Trigger: ACCTACTCTGAGGTGTATCCAGGGCAGCAGTATCTG...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACAAACTGGGCGGTGCTaGGTGCATACTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEQTGRC*VHTGLL
Trigger: AAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACCAAACTGGGCGGTGCTaGGTGCATACTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDQTGRC*VHTGLL
Trigger: AAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTG...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGTATAATGCAGTCCCGTaGGGCCAGGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKYNAVP*GQARTG
Trigger: CCCTGTCCGTGCCTGGCCCCACGGGACTGCATTATA...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCTGGCAGTGGGGAACTaGGATAGCCCGGGATGGAAC +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKLAVGN*DSPGWN
Trigger: GTTCCATCCCGGGCTATCCCAGTTCCCCACTGCCAG...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTACTGAGTCTCGCAGCTaGAAGACATGGTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEATESRS*KTWLLT
Trigger: TGTAAGCAACCATGTCTTCCAGCTGCGAGACTCAGT...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATGGTGCCATCTGGCTTaGGAGGCAGGCGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEWCHLA*EAGGRL
Trigger: AAGTCTACCGCCTGCCTCCCAAGCCAGATGGCACCA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGGCGGCAGAAGGCTCTaGCTCCAGGTGTGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATGGRRL*LQVCFG
Trigger: CCCAAAACACACCTGGAGCCAGAGCCTTCTGCCGCC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGCGTGAGATGTGTGTGTaGACAAGGCTGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGREMCV*TRLDRA
Trigger: AGCCCTGTCCAGCCTTGTCCACACACACATCTCACG...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACAGAAGGATCAATGCTaGACAAGAAGCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLHRAESESPPTHLGQAEQKDQC*TRSRLG
Trigger: ACCCAGCCTGCTTCTTGTCCAGCATTGATCCTTCTG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACTGTCCCCCACCCATTaGAGGTTCCTCCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPLSPTH*RFLPDL
Trigger: CAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACCTGTCCCCCACCCATTaGAGGTTCCTCCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDLSPTH*RFLPDL
Trigger: CAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAG...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGGAATAGCCGAGCCTTaGCTTGAAACATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRGIAEP*LETSRA
Trigger: AGCTCTGGATGTTTCAAGCCAAGGCTCGGCTATTCC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGAAAGGAAATTTACTATaGGGCGGGAATAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVKGNLL*GGNSRA
Trigger: GGCTCGGCTATTCCCGCCCCATAGTAAATTTCCTTT...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCAGCTGAAGCCAACTTaGAAAATTCCAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TELNLRAHPPTSARPKLTQLKPT*KIPGKR
Trigger: CCTTTTCCCTGGAATTTTCCAAGTTGGCTTCAGCTG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACAGGCCATGGCTGAGTaGGACTTTGCCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQQAMAE*DFARLS
Trigger: AGACAGCCTGGCAAAGTCCCACTCAGCCATGGCCTG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCAAGAAAGGAGGGCCTaGGGCCTGCATCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESQERRA*GLHQAM
Trigger: CATGGCCTGATGCAGGCCCCAGGCCCTCCTTTCTTG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCAACAGGCAGGGCAGGTaGTGCATCAGATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGNRQGR*CIRCPG
Trigger: TCCTGGACATCTGATGCACCACCTGCCCTGCCTGTT...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACAGACTCATATGCGAATaGACCATCACCGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHRLICE*TITVWR
Trigger: GCGCCACACGGTGATGGTTCATTCGCATATGAGTCT...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCAGACTCATATGCGAATaGACCATCACCGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGRLICE*TITVWR
Trigger: GCGCCACACGGTGATGGTTCATTCGCATATGAGTCT...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACAGGGTCTTGTAGACTaGGTCTCGCAGCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPQGLVD*VSQLED
Trigger: GTCTTCCAGCTGCGAGACTCAGTCTACAAGACCCTG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACAGGGTCTTGTAGACTaGGTCTCGCAGCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQQGLVD*VSQLED
Trigger: GTCTTCCAGCTGCGAGACTCAGTCTACAAGACCCTG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCGCTGGGGGAGGGTTTaGATGGTGCAGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALRWGRV*MVQLGT
Trigger: GGTCCCCAGCTGCACCATTCAAACCCTCCCCCAGCG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAAAACAGCTCTTCAGCTaGAGCCAACTTGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: RGCHSARFQELDCWAQGPKQLFS*SQLGKF
Trigger: GAATTTTCCAAGTTGGCTTCAGCTGAAGAGCTGTTT...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGAGGTCAAGGCGGAGCTaGCCCCTGCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALRSRRS*PLPHQA
Trigger: TGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCT...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCCCGGGGACCTCCATaGTGCAGAAACTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKPRGPP*CRNWLL
Trigger: TAACAGCCAGTTTCTGCAGCATGGAGGTCCCCGGGG...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACACAAGGGTGTCATTCCTaGTGCCCGGGTGGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATQGCHS*CPGGVH
Trigger: ATGAACCCCACCCGGGCAGCAGGAATGACACCCTTG...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCCTTGCAGATACTGCTaGCCTGGATACACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGPCRYC*PGYTSE
Trigger: CTCTGAGGTGTATCCAGGGCAGCAGTATCTGCAAGG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGAATGTAAATCAGGATaGCCAGCATGTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAECKSG*PACTGP
Trigger: TGGACCAGTACATGCTGGGCATCCTGATTTACATTC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCCAGATGCCCAGCTCTaGCCAGTGGAGGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESPDAQL*PVEELL
Trigger: CAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGCCAGCCCTGCCAGATaGCCAGCTCTGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALASPAR*PALPSG
Trigger: TCCACTGGGCAGAGCTGGGCATCTGGCAGGGCTGGC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGTCCTGCACAAGCTTTaGAGGCACAGCCCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGVLHKL*RHSPSF
Trigger: AAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGAC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGGCAGGACACACCTCTaGAATCTCTGGGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGGRTHL*NLWEVT
Trigger: TGTCACTTCCCAGAGATTGCAGAGGTGTGTCCTGCC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGGCAGGACACACCTCTaGAATCTCTGGGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGGRTHL*NLWEVT
Trigger: TGTCACTTCCCAGAGATTGCAGAGGTGTGTCCTGCC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGGCCACGGTGCCCATaGATTCCTCAATCATTTCTC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHGPRCP*IPQSFL
Trigger: GAGAAATGATTGAGGAATGCATGGGCACCGTGGCCC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGTTTCATGGGGTTCATaGAGTTCATTGGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: LHRAESESPPTHLGQAEAVSWGS*SSLAME
Trigger: CTCCATTGCCAATGAACTCCATGAACCCCATGAAAC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGTGCTGGGTGCATACTaGCCTCCTTGCAGATACTGC +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEVLGAY*PPCRYC
Trigger: GCAGTATCTGCAAGGAGGCCAGTATGCACCCAGCAC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGAAGTCAGGAGGCTGCTaGGAATGTCAGACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGKSGGC*ECQTGR
Trigger: CCTACCAGTCTGACATTCCCAGCAGCCTCCTGACTT...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTCCCAGGATTGTGAGTaGGGTCCAGGTGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESSQDCE*GPGDLL
Trigger: CAGCAGGTCACCTGGACCCCACTCACAATCCTGGGA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGTAGCTCATCAGGGTTaGTCAGTTCCGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEVAHQG*SVPGAG
Trigger: ACCTGCTCCCGGAACTGACCAACCCTGATGAGCTAC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACGTAGCTCATCAGGGTTaGTCAGTTCCGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDVAHQG*SVPGAG
Trigger: ACCTGCTCCCGGAACTGACCAACCCTGATGAGCTAC...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTTGTCCCCGCCGGGCTTaGGGTAAACACAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESCPRRA*GKHRIS
Trigger: ACTGATCCTGTGTTTACCCCAAGCCCGGCGGGGACA...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCAAGGCTGGACAGGGCTaGGCAGGGGCACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSKAGQG*AGAPQQ
Trigger: TTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCTT...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACGTGAGATGTGTGTGTaGACAAGGCTGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQREMCV*TRLDRA
Trigger: AGCCCTGTCCAGCCTTGTCCACACACACATCTCACG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTAGCCAACAGATGCAGTaGCTTCCTCCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESSQQMQ*LPPPPP
Trigger: AGGTGGGGGAGGAGGAAGCCACTGCATCTGTTGGCT...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAATCCAGAGCTCAACCTaGGGCCCCAAAAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQIQSST*GPKSHL
Trigger: CAAGTGGCTTTTGGGGCCCCAGGTTGAGCTCTGGAT...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGCCTCTCCTGCTGGCTaGCTGGGAAGGCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALASPAG*LGRPSR
Trigger: CCTTGAGGGCCTTCCCAGCCAGCCAGCAGGAGAGGC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGACCTCTTGGTTTGGTaGCATGTAAGGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPDLLVW*HVRDAA
Trigger: AGCAGCGTCCCTTACATGTCACCAAACCAAGAGGTC...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGCTTCCAGAGGGCGATaGGTGCAAGGAGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATASRGR*VQGVEV
Trigger: AACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCAGTGGAGGAGTTGTTaGAACAGAAGGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGQWRSC*NRRINA
Trigger: AGCATTGATCCTTCTGTTTCAACAACTCCTCCACTG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCATTGGAGGTTCCTCCCTaGTCTGTCTGCACATGGGAA +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPLEVPP*SVCTWE
Trigger: TTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAA...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHPTGRV*QFLSGT
Trigger: AGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACCTCCTTGCAGATACTaGTGCCCTGGATACACCTCA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEPPCRY*CPGYTS
Trigger: TGAGGTGTATCCAGGGCAGCAGTATCTGCAAGGAGG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGCGCAAACTGGGCGGTaGTGGGTGCATACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALAQTGR*WVHTGL
Trigger: GAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGCGTTGGGCCCAGGGGTaGCAGGGATGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSERWAQG*QGWCRC
Trigger: GCAGCGGCACCATCCCTGGCACCCCTGGGCCCAACG...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACAGCAAAAACCGTTCTaGAGCAGCAGGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQQQKPF*SSRLGR
Trigger: TCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCTGGGCAAGCCTGGGATaGTTCACAAAACAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGWASLG*FTKQLF
Trigger: GAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCA...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGACTGTGCGTGCTGCTaGTTCTTTTGTTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHDCACC*FFCFLH
Trigger: GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCTGTATGAACTGTCTTaGTTTTTCATCCCACGTTGT +
Preference number: 4 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRELYELS*FFIPRC
Trigger: ACAACGTGGGATGAAAAAGCAAGACAGTTCATACAG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACGCAGCTGGAAGACATaGTTGCTTACAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQRSWKT*LLTARL
Trigger: CAACCTGGCTGTAAGCAACCATGTCTTCCAGCTGCG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGCAGCGCTTCAGTGCTaGCCCATCCGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALAALQC*PIRLLL
Trigger: AAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCAGGCCCCAGGAAGCTaGAACCCTGGCCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALQAPGS*NPGQGS
Trigger: ACTACCCTGGCCAGGGTTCCAGCTTCCTGGGGCCTG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCAGAAGGATCAATGCTaGACAAGAAGCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHQKDQC*TRSRLG
Trigger: ACCCAGCCTGCTTCTTGTCCAGCATTGATCCTTCTG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGAAGGATCAATGCTaGACAAGAAGCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGQKDQC*TRSRLG
Trigger: ACCCAGCCTGCTTCTTGTCCAGCATTGATCCTTCTG...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCAAGAGCTGGACTGCTaGGCACAGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALQELDC*AQGPLE
Trigger: CTCCAGTGGCCCCTGTGCCCAGCAGTCCAGCTCTTG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCCAGGAACATGCTGGCTaGACAGCTGGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSQEHAG*TAGSPL
Trigger: GAGAGGGGAGCCAGCTGTCCAGCCAGCATGTTCCTG...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCTGGGTGTGGGCCCATaGGGTGGAGACAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALLGVGP*GGDREV
Trigger: CACCTCTCTGTCTCCACCCCATGGGCCCACACCCAG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAATCTCCTGGGCAAGCCTaGGATGCTTCACAAAACAGC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQSPGQA*DASQNS
Trigger: GCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGA...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCTCCTGCTGGCTGGCTaGGAAGGCCCTCAAGGATGG +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALLLLAG*EGPQGW
Trigger: CCATCCTTGAGGGCCTTCCCAGCCAGCCAGCAGGAG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAAACAGGCAGGGCAGGTaGTGCATCAGATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATNRQGR*CIRCPG
Trigger: TCCTGGACATCTGATGCACCACCTGCCCTGCCTGTT...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
3UTR CAA 72 bp CTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCACCCCGAGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPAVSVSTLCTL*CFVAPPPRGLC
Trigger: GCAGAGGCCTCGGGGTGGGGGAGCTACAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
3UTR CAA 72 bp CCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATaGTTGTGCTTTGTAGCTCCCCCACCCCGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLPAVSVSTLCT*LCFVAPPPRGL
Trigger: GAGGCCTCGGGGTGGGGGAGCTACAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGCAAGAAGGGAGACTTaGCCTCTTGGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEARRET*PLGLVT
Trigger: TGTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGTCCCCCGCTCACAGTTaGGCTGCAGGTACGACTCCA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALSPAHS*AAGTTP
Trigger: TGGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGA...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCAAGCCCAGATAAGGTaGCATAGTGGCAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHQAQIR*HSGKCL
Trigger: GAGACATTTGCCACTATGTCACCTTATCTGGGCTTG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAATGGGCAAGCCTGGGATaGTTCACAAAACAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQWASLG*FTKQLF
Trigger: GAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCA...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGGCTTCTGGGTTGTTTaGAGCCTTTTGCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPGFWVV*SLLLVP
Trigger: TGGGACAAGCAAAAGGCTGCAAACAACCCAGAAGCC...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGTTCATGGAGTTCATTaGCAATGGAGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: WERSPLENLYTELNLRAHVHGVH*QWSSLQ
Trigger: CTGTAGGCTGCTCCATTGCCAATGAACTCCATGAAC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGTTCATGGAGTTCATTaGCAATGGAGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGVHGVH*QWSSLQ
Trigger: CTGTAGGCTGCTCCATTGCCAATGAACTCCATGAAC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDAGQVS*GSWSSL
Trigger: CAATGAACTCCATGAACCCCATGAAACCTGCCCTGC...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGCCATGCTGCAGAAACTaGCTGTTAAAAGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGPCCRN*LLKDCP
Trigger: CGGACAGTCTTTTAACAGCCAGTTTCTGCAGCATGG...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACAGATACTGCTGCCCTaGATACACCTCAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEQILLP*IHLRVG
Trigger: ACCTACTCTGAGGTGTATCCAGGGCAGCAGTATCTG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGTGGCGTGGGGTTCCCTaGCAGTGGGGAACTGGGATA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALWRGVP*QWGTGI
Trigger: TATCCCAGTTCCCCACTGCCAGGGAACCCCACGCCA...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGTCCAGGTGACCTGCTaGTGCCATCTGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALVQVTC*CHLAWE
Trigger: CTCCCAAGCCAGATGGCACCAGCAGGTCACCTGGAC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGGGGGAGGGTTTGAATaGTGCAGCTGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALGGGFE*CSWGPG
Trigger: TCCAGGTCCCCAGCTGCACCATTCAAACCCTCCCCC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSQSPSFSTPSGSITFATAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGCTCCAGGTGTGTTTTaGGGGAGGTTTGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESAPGVF*GRFGKD
Trigger: GTCTTTCCCAAACCTCCCCCAAAACACACCTGGAGC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACAAAGGAAATTTACTATaGGGCGGGAATAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHKGNLL*GGNSRA
Trigger: GGCTCGGCTATTCCCGCCCCATAGTAAATTTCCTTT...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACTGAGGATGGGCTTCTaGGTTGTTTGCAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPLRMGF*VVCSLL
Trigger: CAAAAGGCTGCAAACAACCCAGAAGCCCATCCTCAG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTATTTCTCCAGTCTTCTaGGGATGGGCTTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESISPVF*GWASGL
Trigger: CAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAAT...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGGACTGGGTCATGCCCTaGTGCAGGGGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEDWVMP*CRGSLC
Trigger: GCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTC...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCCAGAGGGCGATGAGTaGAAGGAGTTGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALPEGDE*KELRLG
Trigger: GCCCAACCTCAACTCCTTGCACTCATCGCCCTCTGG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGATCTTGGTGATGCAGTaGTCAGCAGGCAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALILVMQ*SAGRRR
Trigger: GCGCCTCCTGCCTGCTGAGCACTGCATCACCAAGAT...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGAATGTAAATCAGGATaGCCAGCATGTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGECKSG*PACTGP
Trigger: TGGACCAGTACATGCTGGGCATCCTGATTTACATTC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGTTTCATGGGGTTCATaGAGTTCATTGGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: ARESLHRAESESPPTHLGVSWGS*SSLAME
Trigger: CTCCATTGCCAATGAACTCCATGAACCCCATGAAAC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESAGQVS*GSWSSL
Trigger: CAATGAACTCCATGAACCCCATGAAACCTGCCCTGC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACCATGCTGCAGAAACTaGCTGTTAAAAGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: EKGNLGAQPARESLHRAEPCCRN*LLKDCP
Trigger: CGGACAGTCTTTTAACAGCCAGTTTCTGCAGCATGG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCAAACTGGGCGGTGCTaGGTGCATACTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALQTGRC*VHTGLL
Trigger: AAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGGGCACGGACAGGGACTaGGTCATGCCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEGTDRD*VMPCCR
Trigger: CCTGCAGCAGGGCATGACCCAGTCCCTGTCCGTGCC...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGAGCCAACAGATGCAGTaGCTTCCTCCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALSQQMQ*LPPPPP
Trigger: AGGTGGGGGAGGAGGAAGCCACTGCATCTGTTGGCT...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGCTTCCAGAGGGCGATaGGTGCAAGGAGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALASRGR*VQGVEV
Trigger: AACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCATCCGGCTCCTCCTTaGTGTGCATGTCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALHPAPP*CACQAS
Trigger: TGAAGCCTGACATGCACATCAAGGAGGAGCCGGATG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTGGCATCATACTGTATaGACTGTCTTGCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRWHHTV*TVLLFH
Trigger: ATGAAAAAGCAAGACAGTTCATACAGTATGATGCCA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAAAACAGAAGGATCAATaGTGGACAAGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQKQKDQ*WTRSRL
Trigger: CAGCCTGCTTCTTGTCCAGCATTGATCCTTCTGTTT...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGTTCATGGAGTTCATTaGCAATGGAGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESVHGVH*QWSSLQ
Trigger: CTGTAGGCTGCTCCATTGCCAATGAACTCCATGAAC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGTTTTGGGGGAGGTTTaGGAAAGACCACCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALVLGEV*ERPPGV
Trigger: GACACCCGGTGGTCTTTCCCAAACCTCCCCCAAAAC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACAGCTGAAGCCAACTTaGAAAATTCCAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQQLKPT*KIPGKR
Trigger: CCTTTTCCCTGGAATTTTCCAAGTTGGCTTCAGCTG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSESDPAG*VALCCQ
Trigger: TTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCT...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGCAGAGTAGGTTCTCTTaGCCCCCTGTCGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEQSRFS*PPVGAV
Trigger: CACTGCCCCGACAGGGGGTCAAGAGAACCTACTCTG...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGGCATCAGGCCATGGCTaGGTGGGACTTTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEASGHG*VGLCQA
Trigger: AGCCTGGCAAAGTCCCACTCAGCCATGGCCTGATGC...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCCTCCTTGCAGATACTaGTGCCCTGGATACACCTCA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALPPCRY*CPGYTS
Trigger: TGAGGTGTATCCAGGGCAGCAGTATCTGCAAGGAGG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGCAGGTGACCTGCTGGTaGCATCTGGCTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEQVTCW*HLAWEA
Trigger: TGCCTCCCAAGCCAGATGGCACCAGCAGGTCACCTG...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTAAACAGAAGGATCAATaGTGGACAAGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KGNLGAQPARESLHRAESKQKDQ*WTRSRL
Trigger: CAGCCTGCTTCTTGTCCAGCATTGATCCTTCTGTTT...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR GCA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACCTGTATGAACTGTCTTaGTTTTTCATCCCACGTTGT +
Preference number: 4 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHLYELS*FFIPRC
Trigger: ACAACGTGGGATGAAAAAGCAAGACAGTTCATACAG...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGCAAGAAGGGAGACTTaGCCTCTTGGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALARRET*PLGLVT
Trigger: TGTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR TCA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGTGGCATCATACTGTATaGACTGTCTTGCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGWHHTV*TVLLFH
Trigger: ATGAAAAAGCAAGACAGTTCATACAGTATGATGCCA...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR GCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCGGGGACCTCCATGCTaGAGAAACTGGCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALRGPPC*RNWLLK
Trigger: TTTTAACAGCCAGTTTCTGCAGCATGGAGGTCCCCG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALAGQVS*GSWSSL
Trigger: CAATGAACTCCATGAACCCCATGAAACCTGCCCTGC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCCATGCTGCAGAAACTaGCTGTTAAAAGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: APLSQLLVFLHYVHCCALPCCRN*LLKDCP
Trigger: CGGACAGTCTTTTAACAGCCAGTTTCTGCAGCATGG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGGTGCTGGGTGCATACTaGCCTCCTTGCAGATACTGC +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEVLGAY*PPCRYC
Trigger: GCAGTATCTGCAAGGAGGCCAGTATGCACCCAGCAC...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR TCA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGAGACTCATATGCGAATaGACCATCACCGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: MASYCMNCLAFSSHVVSERLICE*TITVWR
Trigger: GCGCCACACGGTGATGGTTCATTCGCATATGAGTCT...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS GCA 90 bp AAGCTGCACCACCCGGCGCACCCAGGCTCCCAGGGAGGTAGGCTCTaGCCATGCACCCAGAAAGGGTACATGGCCAGCAGCGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: KLHHPAHPGSQGGRL*PCTQKGYMASSEGL
Trigger: CAGGCCCTCGCTGCTGGCCATGTACCCTTTCTGGGTGCATGGGCAGAGCCTACCTCCCTGGGAGCCTGGGTGCGCCGGGTGGTGCAGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478045.5
CDS GCA 90 bp GGCAGGGGGCTGCCCAGGGCTGGGCGCAAACTGGGCGGTGCTGGGTaGATACTGGCCTCCTTGCAGATACTGCTGCCCTGGATACACCTC +
Preference number: 5 (lower is better)
Translates to: GRGLPRAGRKLGGAG*ILASLQILLPWIHL
Trigger: GAGGTGTATCCAGGGCAGCAGTATCTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000615423.1
CDS CCA 90 bp AGGGGGCAGGGGGCTGCCCAGGGCTGGGCGCAAACTGGGCGGTGCTaGGTGCATACTGGCCTCCTTGCAGATACTGCTGCCCTGGATACA +
Preference number: 5 (lower is better)
Translates to: RGQGAAQGWAQTGRC*VHTGLLADTAALDT
Trigger: TGTATCCAGGGCAGCAGTATCTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCCCTGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000615423.1
CDS CCA 90 bp CATGAGCACGTGGGCGGGGCTCACGGTGCGGCAGCGCTTCAGTGCTaGCCCATCCGGCTCCTCCTTGATGTGCATGTCAGGCTTCACGGG +
Preference number: 5 (lower is better)
Translates to: HEHVGGAHGAAALQC*PIRLLLDVHVRLHG
Trigger: CCCGTGAAGCCTGACATGCACATCAAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCCACGTGCTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000480964.5
ENST00000492558.1
ENST00000615423.1
CDS CCA 90 bp GGTAGCCCCCGCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTaGCGCCGCCTTCAGCAAACGCCTGCTGTCCCAGGCACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GSPRGCTRLAARSPC*RRLQQTPAVPGTGS
Trigger: AGAGCCAGTGCCTGGGACAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413916.5
ENST00000433667.5
CDS-3UTR CAA 90 bp GTAGCCCCCGCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCCGGCTGAGTGGCGCTTaGTTGCCAAGGCACAGACTC +
Preference number: 5 (lower is better)
Translates to: VAPAAVHALLHVALVGAARLSGA*LPRHRL
Trigger: GAGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCG...GGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CAA 90 bp GGCCCCAGGGTAGCCCCCGCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTTGCAGCAGCTGCCGCTaGCGTGAAGTCAGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GPRVAPAAVHALLHVALVCSSCR*REVSGG
Trigger: CCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCA...AACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTACCCTGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CAA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACCCAGGATACCCATGTaGGGGCAGACGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRPRIPM*GQTLPC
Trigger: GCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGGG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS GCA 90 bp CTGGGAACCATGATAACAGAGGTGGACAGGAGGCGGCCCCAGGGGTaGCTGCCCGGTCGCCCTCTCTCCATATGCCCACCCTGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: LGTMITEVDRRRPQG*LPGRPLSICPPCEP
Trigger: AGGCTCACAGGGTGGGCATATGGAGAGAGGGCGACCGGGCAGGCACCCCTGGGGCCGCCTCCTGTCCACCTCTGTTATCATGGTTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463056.5
ENST00000478045.5
CDS CCA 90 bp CTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGTCCCAGGCACTGTaGGGAGGTCAAGGCGGAGCTGCCCCCTGCCACACCAGGCATCAT +
Preference number: 5 (lower is better)
Translates to: LVGAAFSKRLLSQAL*GGQGGAAPCHTRHH
Trigger: ATGATGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCTCCCCACAGTGCCTGGGACAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000416856.5
ENST00000441627.5
ENST00000615423.1
CDS-3UTR CAA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGATGCAGCAGCTGCCGCTaGCGTGAAGTCAGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRCSSCR*REVSGG
Trigger: CCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCA...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTAGTCAGTGGAGGGTCTaGCAGCATGTGAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPSQWRV*QHVRGG
Trigger: GCCTCCCCTCACATGCTGCAAGACCCTCCACTGACT...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCCCAGGATACCCATGTaGGGGCAGACGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGPRIPM*GQTLPC
Trigger: GCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGGG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCACCCAGGATACCCATGTaGGGGCAGACGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAPRIPM*GQTLPC
Trigger: GCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGGG...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGGCTTGTGCGAGGTCTaGTTGTCGCCACGCTCGATG +
Preference number: 5 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGGLCEV*LSPRSM
Trigger: CATCGAGCGTGGCGACAACAAGACCTCGCACAAGCC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACGGAGGGGCCCCAAGGTaGGAGGTGTGTAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: HRAESESPPTHLGQAEAHGGAPR*EVCSPG
Trigger: ACCAGGACTACACACCTCCAACCTTGGGGCCCCTCC...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACCCACTCAGGCCAGGTaGGCTGTAGCTGACGCTGCC +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPPTQAR*AVADAA
Trigger: GGCAGCGTCAGCTACAGCCAACCTGGCCTGAGTGGG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS TCA 90 bp TCAGGCCTGCTCAGGAAGATGGGTGGACACCCAGAAAACGGGCCCTaGGAGTGTGGGAGGAGGAACAGAGCCTCGTGGGGGTCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SGLLRKMGGHPENGP*ECGRRNRASWGSGG
Trigger: CCCACCTGACCCCCACGAGGCTCTGTTCCTCCTCCCACACTCTCAGGGCCCGTTTTCTGGGTGTCCACCCATCTTCCTGAGCAGGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478045.5
CDS GCA 90 bp AAGGCCAGTTCACCCGTAGGTCCTAAGCTCGCTTGGCCCAAGGACTaGCGGGACGCTGGGGGAGGGTTTGAATGGTGCAGCTGGGGACCT +
Preference number: 5 (lower is better)
Translates to: KASSPVGPKLAWPKD*RDAGGGFEWCSWGP
Trigger: AGGTCCCCAGCTGCACCATTCAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACCTACGGGTGAACTGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000463931.1
ENST00000478045.5
ENST00000615423.1
CDS GCA 90 bp CTCTTCGTCTCTCAGAGCTCTGAGGAGGCACTAAGCACTGCCAAGTaGTGGGAGGCTCTGTCTGCTCGGGGGTGGGGCACCAGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: LFVSQSSEEALSTAK*WEALSARGWGTSGC
Trigger: GCACCCACTGGTGCCCCACCCCCGAGCAGACAGAGCCTCCCAGCACTTGGCAGTGCTTAGTGCCTCCTCAGAGCTCTGAGAGACGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS CCA 90 bp GTGGCAGGACTGAAGGCCAGTTCACCCGTAGGTCCTAAGCTCGCTTaGCCCAAGGACTGCCGGGACGCTGGGGGAGGGTTTGAATGGTGC +
Preference number: 5 (lower is better)
Translates to: VAGLKASSPVGPKLA*PKDCRDAGGGFEWC
Trigger: GCACCATTCAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACCTACGGGTGAACTGGCCTTCAGTCCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000463931.1
ENST00000478045.5
ENST00000615423.1
CDS CCA 90 bp GCACTAAGCACTGCCAAGTGCTGGGAGGCTCTGTCTGCTCGGGGGTaGGGCACCAGTGGGTGCTTACCTGGCTCTGTGTCGCGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: ALSTAKCWEALSARG*GTSGCLPGSVSRCQ
Trigger: TTGGCAACGCGACACAGAGCCAGGTAAGCACCCACTGGTGCCCCACCCCCGAGCAGACAGAGCCTCCCAGCACTTGGCAGTGCTTAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS-3UTR CAA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACAGTCAGTGGAGGGTCTaGCAGCATGTGAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HRAESESPPTHLGQAEAHSQWRV*QHVRGG
Trigger: GCCTCCCCTCACATGCTGCAAGACCCTCCACTGACT...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCATGCAGCAGCTGCCGCTaGCGTGAAGTCAGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPCSSCR*REVSGG
Trigger: CCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCA...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCCCAGGATACCCATGTaGGGGCAGACGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LHRAESESPPTHLGQAEAPRIPM*GQTLPC
Trigger: GCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGGG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGTCCCCCGCTCACAGTaGAGCTGCAGGTACGACTCC +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGVPRSQ*SCRYDS
Trigger: GGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGAC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGTCCCCCGCTCACAGTaGAGCTGCAGGTACGACTCC +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPVPRSQ*SCRYDS
Trigger: GGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGAC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCCATCCGGCTCCTCCTaGATGTGCATGTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPPSGSS*MCMSGF
Trigger: GAAGCCTGACATGCACATCAAGGAGGAGCCGGATGG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGAGGGGCCCCAAGGTaGGAGGTGTGTAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGGAPR*EVCSPG
Trigger: ACCAGGACTACACACCTCCAACCTTGGGGCCCCTCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCTGGCGCCCTGCCCGTaGAACTGCTCTGTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRELAPCP*NCSVGL
Trigger: TAAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCAG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCTGGCGCCCTGCCCGTaGAACTGCTCTGTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGLAPCP*NCSVGL
Trigger: TAAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCAG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCTGGCGCCCTGCCCGTaGAACTGCTCTGTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: TELNLRAHPPTSARPKLTLAPCP*NCSVGL
Trigger: TAAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCAG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGCTGACGCTGCCCCCGTaGAAGCTGGCGCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGLTLPP*KLAPCP
Trigger: CGGGCAGGGCGCCAGCTTCAACGGGGGCAGCGTCAG...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGTGTTCCCCCAGTTCTaGCCTCTCCTGCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPVFPQF*PLLLAG
Trigger: GCCAGCCAGCAGGAGAGGCAAGAACTGGGGGAACAC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGTGTTCCCCCAGTTCTaGCCTCTCCTGCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAAVFPQF*PLLLAG
Trigger: GCCAGCCAGCAGGAGAGGCAAGAACTGGGGGAACAC...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCCCGGGAGCATCACGTTaGCAACAGGCAGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGPGASR*QQAGQV
Trigger: CACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGG...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS TCA 90 bp GAAGGAAGGGTGGAGGCCCCACTGTCTGTTTCCTGGGACCATAGCTaGGACTGTGCCTTCACCGCCACGTCCCTGAGATGGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: EGRVEAPLSVSWDHS*DCAFTATSLRWEGL
Trigger: CAGCCCCTCCCATCTCAGGGACGTGGCGGTGAAGGCACAGTCTCAGCTATGGTCCCAGGAAACAGACAGTGGGGCCTCCACCCTTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463931.1
CDS-3UTR CAA 90 bp GTAGCCCCCGCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCGGTTCATGGAGTTCATaGGCAATGGAGCAGCCTACA +
Preference number: 5 (lower is better)
Translates to: VAPAAVHALLHVALVGAAGSWSS*AMEQPT
Trigger: TGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC...GGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CAA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGCGGCTGAGTGGCGCTTaGTTGCCAAGGCACAGACTC +
Preference number: 5 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRERLSGA*LPRHRL
Trigger: GAGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCG...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAACGCCTGCTGTCCCAGCGGCTGTACACGCCTaGCTGCACGTAGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: LAARSPCWRRLQQTPAVPAAVHA*LHVALV
Trigger: AACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC...TGGGACAGCAGGCGTTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CAA 90 bp GCGGCTGTACACGCCTTGCTGCACGTAGCCCTTGTTGGCGCCGCCTTCAGCAAAAGTCAGTGGAGGGTCTaGCAGCATGTGAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AAVHALLHVALVGAAFSKSQWRV*QHVRGG
Trigger: GCCTCCCCTCACATGCTGCAAGACCCTCCACTGACT...TTTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTGTCCCCCGCTCACAGTaGAGCTGCAGGTACGACTCC +
Preference number: 5 (lower is better)
Translates to: LHRAESESPPTHLGQAEAVPRSQ*SCRYDS
Trigger: GGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGAC...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTAGCAGGTCGTCATTGTaGTTCGTAGGGAGGTCGGGT +
Preference number: 5 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPSRSSL*FVGRSG
Trigger: ACCCGACCTCCCTACGAACAACAATGACGACCTGCT...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACCTGACGCTGCCCCCGTaGAAGCTGGCGCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDLTLPP*KLAPCP
Trigger: CGGGCAGGGCGCCAGCTTCAACGGGGGCAGCGTCAG...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCCCACTCAGGCCAGGTaGGCTGTAGCTGACGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGPTQAR*AVADAA
Trigger: GGCAGCGTCAGCTACAGCCAACCTGGCCTGAGTGGG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS CCA 90 bp GCTCCCAGGGAGGTAGGCTCTGCCCATGCACCCAGAAAGGGTACATaGCCAGCAGCGAGGGCCTGTCCTCTCAATGGATTTCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: APREVGSAHAPRKGT*PAARACPLNGFLCS
Trigger: GCTGCAGAGAAATCCATTGAGAGGACAGGCCCTCGCTGCTGGCCATGTACCCTTTCTGGGTGCATGGGCAGAGCCTACCTCCCTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478045.5
CDS CCA 90 bp TTCGTCTCTCAGAGCTCTGAGGAGGCACTAAGCACTGCCAAGTGCTaGGAGGCTCTGTCTGCTCGGGGGTGGGGCACCAGTGGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: FVSQSSEEALSTAKC*EALSARGWGTSGCL
Trigger: TAAGCACCCACTGGTGCCCCACCCCCGAGCAGACAGAGCCTCCCAGCACTTGGCAGTGCTTAGTGCCTCCTCAGAGCTCTGAGAGACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS-3UTR CAA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGACTGAGTGGCGCTTTGTaGCCAAGGCACAGACTCATA +
Preference number: 5 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRLSGAL*PRHRLI
Trigger: TATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAG...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTCTGAGTGGCGCTTTGTaGCCAAGGCACAGACTCATA +
Preference number: 5 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPLSGAL*PRHRLI
Trigger: TATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAG...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCGGCTGAGTGGCGCTTaGTTGCCAAGGCACAGACTC +
Preference number: 5 (lower is better)
Translates to: LHRAESESPPTHLGQAEARLSGA*LPRHRL
Trigger: GAGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTGGGGCTGCCAAACAACTGTCTCAGTGCCCCAGGGCAAGCCCAGATAAGGTGAGTCAGTGGAGGGTCTaGCAGCATGTGAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AGAAKQLSQCPRASPDKVSQWRV*QHVRGG
Trigger: GCCTCCCCTCACATGCTGCAAGACCCTCCACTGACT...CACCTTATCTGGGCTTGCCCTGGGGCACTGAGACAGTTGTTTGGCAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGTGCAGCAGCTGCCGCTaGCGTGAAGTCAGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGCSSCR*REVSGG
Trigger: CCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCA...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTGCAGCAGCTGCCGCTaGCGTGAAGTCAGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRCSSCR*REVSGG
Trigger: CCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCACCTCGGCCAGGCCGAAGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTTGCAAGGAGTTGAGGTaGGGCTTGAGATCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: PPRPGRSSLSPTHWRFLPCKELR*GLRSGK
Trigger: CTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCA...AGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCTTCGGCCTGGCCGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTTTGTGCGAGGTCTTGTaGTCGCCACGCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: TELNLRAHPPTSARPKLTLCEVL*SPRSMV
Trigger: CACCATCGAGCGTGGCGACAACAAGACCTCGCACAA...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCTTGTGCGAGGTCTTGTaGTCGCCACGCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGLCEVL*SPRSMV
Trigger: CACCATCGAGCGTGGCGACAACAAGACCTCGCACAA...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTCCATCCGGCTCCTCCTaGATGTGCATGTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TELNLRAHPPTSARPKLTPSGSS*MCMSGF
Trigger: GAAGCCTGACATGCACATCAAGGAGGAGCCGGATGG...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGGAGGGGCCCCAAGGTaGGAGGTGTGTAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SLHRAESESPPTHLGQAEGGAPR*EVCSPG
Trigger: ACCAGGACTACACACCTCCAACCTTGGGGCCCCTCC...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAAGTAGCTCATCAGGGTaGGTCAGTTCCGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAASSSSG*VSSGSR
Trigger: CCTGCTCCCGGAACTGACCAACCCTGATGAGCTACT...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTAGTAGCTCATCAGGGTaGGTCAGTTCCGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TELNLRAHPPTSARPKLTSSSSG*VSSGSR
Trigger: CCTGCTCCCGGAACTGACCAACCCTGATGAGCTACT...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCGAAAGCAGGTCGTCATaGTTGTTCGTAGGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGESRSS*LFVGRS
Trigger: CGACCTCCCTACGAACAACAATGACGACCTGCTTTC...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCTGACGCTGCCCCCGTaGAAGCTGGCGCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: KGNLGAQPARESLHRAESLTLPP*KLAPCP
Trigger: CGGGCAGGGCGCCAGCTTCAACGGGGGCAGCGTCAG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGGGTCCTGCACAAGCTTaGCAGGCACAGCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQGPAQA*QAQPKL
Trigger: AAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACC...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS CCA 90 bp CGAATGAACCATCACCGTGTGGCGCAGGGGGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTGGCAATGGAGCAGCCTACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: RMNHHRVAQGAGQVS*GSWSSLAMEQPTGR
Trigger: CCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCCATGAACCCCATGAAACCTGCCCTGCCCCCTGCGCCACACGGTGATGGTTCATTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000416856.5
ENST00000433667.5
ENST00000441627.5
ENST00000457123.5
ENST00000492001.1
CDS-3UTR CAA 90 bp GCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTGAGGGGAGGCCCAGGCCCCTGAGTGGCGCTTTGTaGCCAAGGCACAGACTCATA +
Preference number: 5 (lower is better)
Translates to: ACVKSVEGLAACEGRPRPLSGAL*PRHRLI
Trigger: TATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAG...GGGCCTGGGCCTCCCCTCACATGCTGCAAGACCCTCCACTGACTTCACGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTTTGTGCGAGGTCTTGTaGTCGCCACGCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: LHRAESESPPTHLGQAEALCEVL*SPRSMV
Trigger: CACCATCGAGCGTGGCGACAACAAGACCTCGCACAA...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACGGCTTGTGCGAGGTCTaGTTGTCGCCACGCTCGATG +
Preference number: 5 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHGLCEV*LSPRSM
Trigger: CATCGAGCGTGGCGACAACAAGACCTCGCACAAGCC...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGCAAAGCTGTCTTGTaGCACACAGGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRSKAVL*HTGHLQ
Trigger: TTGGAGGTGTCCTGTGTGCAACAAGACAGCTTTGCT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCAGCAAAGCTGTCTTGTaGCACACAGGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGSKAVL*HTGHLQ
Trigger: TTGGAGGTGTCCTGTGTGCAACAAGACAGCTTTGCT...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGGCTGGACAGGGCTGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAAGCAGGTCGTCATTGTaGTTCGTAGGGAGGTCGGGT +
Preference number: 5 (lower is better)
Translates to: RLDRAGQGHLSKNRSAAASRSSL*FVGRSG
Trigger: ACCCGACCTCCCTACGAACAACAATGACGACCTGCT...TGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCAGCCCTGTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTAGCAGGTCGTCATTGTaGTTCGTAGGGAGGTCGGGT +
Preference number: 5 (lower is better)
Translates to: TELNLRAHPPTSARPKLTSRSSL*FVGRSG
Trigger: ACCCGACCTCCCTACGAACAACAATGACGACCTGCT...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGCTGAGTGGCGCTTTGTaGCCAAGGCACAGACTCATA +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGLSGAL*PRHRLI
Trigger: TATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAG...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGTGGCTCTGTGTCGCGTaGCCAACTCCCCACACAGTA +
Preference number: 5 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRWLCVA*PTPHTV
Trigger: TACTGTGTGGGGAGTTGGCAACGCGACACAGAGCCA...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGATGGCTCTGTGTCGCGTaGCCAACTCCCCACACAGTA +
Preference number: 5 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRWLCVA*PTPHTV
Trigger: TACTGTGTGGGGAGTTGGCAACGCGACACAGAGCCA...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGCTGCAGCAGCTGCCGCTTGCGTGAAGTCAGTGGAGGGTCTTGCAGCATGTTGGCTCTGTGTCGCGTaGCCAACTCCCCACACAGTA +
Preference number: 5 (lower is better)
Translates to: TAAAAAACVKSVEGLAACWLCVA*PTPHTV
Trigger: TACTGTGTGGGGAGTTGGCAACGCGACACAGAGCCA...ACATGCTGCAAGACCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416856.5
CDS-3UTR CAA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAATGGCTCTGTGTCGCGTaGCCAACTCCCCACACAGTA +
Preference number: 5 (lower is better)
Translates to: SLHRAESESPPTHLGQAEWLCVA*PTPHTV
Trigger: TACTGTGTGGGGAGTTGGCAACGCGACACAGAGCCA...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGGCAAGAAGGGAGACTaGACCTCTTGGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGGKKGD*TSWFGD
Trigger: GTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGCC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGGCAAGAAGGGAGACTaGACCTCTTGGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPGKKGD*TSWFGD
Trigger: GTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGCC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCATGCAAGGAGTTGAGGTaGGGCTTGAGATCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPCKELR*GLRSGK
Trigger: CTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCA...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTTGCAAGGAGTTGAGGTaGGGCTTGAGATCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: TELNLRAHPPTSARPKLTCKELR*GLRSGK
Trigger: CTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCA...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAGGCAAGTTCCGCTTTATCTaGGTGATGCAGTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PIEHRAASNSGAGLAAEGKFRFI*VMQCSA
Trigger: TGCTGAGCACTGCATCACCAAGATAAAGCGGAACTT...GCCTTCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCCTCCCATCGAGCACAGGGCTGCTTCCAATTCAGGGGCAGGGCTGGCGGCAGAAAGTTCCGCTTTATCTaGGTGATGCAGTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PSHRAQGCFQFRGRAGGRKFRFI*VMQCSA
Trigger: TGCTGAGCACTGCATCACCAAGATAAAGCGGAACTT...TCTGCCGCCAGCCCTGCCCCTGAATTGGAAGCAGCCCTGTGCTCGATGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGCCCAAGCTTTAGGCAGGTCGCTGGCTTACGAGGAGAAAATAGTCCCTGGGGTCCCCCGCTCACAGTaGAGCTGCAGGTACGACTCC +
Preference number: 5 (lower is better)
Translates to: TAQALGRSLAYEEKIVPGVPRSQ*SCRYDS
Trigger: GGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGAC...CCCAGGGACTATTTTCTCCTCGTAAGCCAGCGACCTGCCTAAAGCTTGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp TCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAACCATCCGGCTCCTCCTaGATGTGCATGTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SLHRAESESPPTHLGQAEPSGSS*MCMSGF
Trigger: GAAGCCTGACATGCACATCAAGGAGGAGCCGGATGG...TTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTAGCAGGTCGTCATTGTaGTTCGTAGGGAGGTCGGGT +
Preference number: 5 (lower is better)
Translates to: LHRAESESPPTHLGQAEASRSSL*FVGRSG
Trigger: ACCCGACCTCCCTACGAACAACAATGACGACCTGCT...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACCCACTCAGGCCAGGTaGGCTGTAGCTGACGCTGCC +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAEPTQAR*AVADAA
Trigger: GGCAGCGTCAGCTACAGCCAACCTGGCCTGAGTGGG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCGGATGGGCTTCTGGGTaGTTTGCAGCCTTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGGWASG*FAAFCL
Trigger: CAAGCAAAAGGCTGCAAACAACCCAGAAGCCCATCC...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS TCA 90 bp GGTTCATGGAGTTCATTGGCAATGGAGCAGCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACTCAGCTGCTCTGGCTCCGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: GSWSSLAMEQPTGRV*QFLSGTQLLWLRPA
Trigger: GGCCGGGCGGAGCCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000416856.5
CDS GCA 90 bp TCTGGAACTCAGCTGCTCTGGTCTTCACTGCACAGGGGGATTTCCTaGCGACCCGAACTCATGCCTCTGGTCTCCTCTCTGAGGACAGTC +
Preference number: 5 (lower is better)
Translates to: SGTQLLWSSLHRGIS*RPELMPLVSSLRTV
Trigger: GACTGTCCTCAGAGAGGAGACCAGAGGCATGAGTTCGGGTCGGCAGGAAATCCCCCTGTGCAGTGAAGACCAGAGCAGCTGAGTTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS GCA 90 bp AGGAGCCAGGAGGGAGGCTGGCTGTGGCATGGGTGGGACTTGCAGTaGTCACCCACAAACAACAGCGGGTTTTGCAGAAGTCGCTATTTG +
Preference number: 5 (lower is better)
Translates to: RSQEGGWLWHGWDLQ*SPTNNSGFCRSRYL
Trigger: CAAATAGCGACTTCTGCAAAACCCGCTGTTGTTTGTGGGTGAGCACTGCAAGTCCCACCCATGCCACAGCCAGCCTCCCTCCTGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482322.1
CDS-3UTR CAA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGGGTTCATGGAGTTCATaGGCAATGGAGCAGCCTACA +
Preference number: 5 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREGSWSS*AMEQPT
Trigger: TGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACTGGTTCATGGAGTTCATaGGCAATGGAGCAGCCTACA +
Preference number: 5 (lower is better)
Translates to: TELNLRAHPPTSARPKLTGSWSS*AMEQPT
Trigger: TGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC...AGTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCGGCTGAGTGGCGCTTaGTTGCCAAGGCACAGACTC +
Preference number: 5 (lower is better)
Translates to: WERSPLENLYTELNLRAHRLSGA*LPRHRL
Trigger: GAGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGCGGCTGTACACGCCTaGCTGCACGTAGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: ARESLHRAESESPPTHLGAAVHA*LHVALV
Trigger: AACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGCGGCTGTACACGCCTaGCTGCACGTAGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHAAVHA*LHVALV
Trigger: AACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACAGTCAGTGGAGGGTCTaGCAGCATGTGAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: WERSPLENLYTELNLRAHSQWRV*QHVRGG
Trigger: GCCTCCCCTCACATGCTGCAAGACCCTCCACTGACT...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATGCAGCAGCTGCCGCTaGCGTGAAGTCAGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAECSSCR*REVSGG
Trigger: CCCTCCACTGACTTCACGCAAGCGGCAGCTGCTGCA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCCCAGGATACCCATGTaGGGGCAGACGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: KGNLGAQPARESLHRAESPRIPM*GQTLPC
Trigger: GCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGGG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCAGATGAGTGCAAGGAGTaGAGGTTGGGCTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPDECKE*RLGLRS
Trigger: TGATCTCAAGCCCAACCTCAACTCCTTGCACTCATC...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGGATGAGTGCAAGGAGTaGAGGTTGGGCTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGDECKE*RLGLRS
Trigger: TGATCTCAAGCCCAACCTCAACTCCTTGCACTCATC...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGCTTGTGCGAGGTCTaGTTGTCGCCACGCTCGATG +
Preference number: 5 (lower is better)
Translates to: WERSPLENLYTELNLRAHGLCEV*LSPRSM
Trigger: CATCGAGCGTGGCGACAACAAGACCTCGCACAAGCC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGTCCCCCGCTCACAGTaGAGCTGCAGGTACGACTCC +
Preference number: 5 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQVPRSQ*SCRYDS
Trigger: GGAGTCGTACCTGCAGCTCAACTGTGAGCGGGGGAC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCACCCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 5 (lower is better)
Translates to: HRAESESPPTHLGQAEAHPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...GTGAGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGGCCCCAAAAGCCACTaGAAGGTCGACCTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LSQSPSFSTPSGSITFATGPKSH*KVDLAP
Trigger: GGGGGCCAGGTCGACCTTCAAGTGGCTTTTGGGGCC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp TTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCCAGGCCGAAGCTCCAGGACACAGTCATTaGACACCCAAGAAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LHRAESESPPTHLGQAEAPGHSH*TPKKGG
Trigger: CCCTCCTTTCTTGGGTGTCAAATGACTGTGTCCTGG...AGCTTCGGCCTGGCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGGCTTCTGGGTTGTTaGCAGCCTTTTGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGLLGC*QPFACP
Trigger: GGGACAAGCAAAAGGCTGCAAACAACCCAGAAGCCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAACGGCTGAGTGGCGCTTaGTTGCCAAGGCACAGACTC +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAERLSGA*LPRHRL
Trigger: GAGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCG...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTGGCTCTGTGTCGCGTaGCCAACTCCCCACACAGTA +
Preference number: 5 (lower is better)
Translates to: WERSPLENLYTELNLRAHWLCVA*PTPHTV
Trigger: TACTGTGTGGGGAGTTGGCAACGCGACACAGAGCCA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGCGGCTGTACACGCCTaGCTGCACGTAGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAEAAVHA*LHVALV
Trigger: AACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAGCGGCTGTACACGCCTaGCTGCACGTAGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQAAVHA*LHVALV
Trigger: AACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACAGTCAGTGGAGGGTCTaGCAGCATGTGAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDSQWRV*QHVRGG
Trigger: GCCTCCCCTCACATGCTGCAAGACCCTCCACTGACT...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp CACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGGGCAAGAAGGGAGACTaGACCTCTTGGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: HCPPPIGGSSLICLHMGRGKKGD*TSWFGD
Trigger: GTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGCC...CCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGTGCAAGGAGTTGAGGTaGGGCTTGAGATCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGCKELR*GLRSGK
Trigger: CTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCA...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGAAGTTCCGCTTTATCTaGGTGATGCAGTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREKFRFI*VMQCSA
Trigger: TGCTGAGCACTGCATCACCAAGATAAAGCGGAACTT...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGGAGGGGCCCCAAGGTaGGAGGTGTGTAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: KGNLGAQPARESLHRAESGGAPR*EVCSPG
Trigger: ACCAGGACTACACACCTCCAACCTTGGGGCCCCTCC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCAGTAGCTCATCAGGGTaGGTCAGTTCCGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ARESLHRAESESPPTHLGSSSSG*VSSGSR
Trigger: CCTGCTCCCGGAACTGACCAACCCTGATGAGCTACT...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp AGAGGCTGCCATTCAGCGAGGTTCCAAGAGCTGGACTGCTGGGCACAGGGGCCACCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 5 (lower is better)
Translates to: RGCHSARFQELDCWAQGPPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...TGGCCCCTGTGCCCAGCAGTCCAGCTCTTGGAACCTCGCTGAATGGCAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGTGCCCAGTGGAGGAGTaGTTGAAACAGAAGGATCAA +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGCPVEE*LKQKDQ
Trigger: TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCA...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGGTCCTGCACAAGCTTaGCAGGCACAGCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHGPAQA*QAQPKL
Trigger: AAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGTGGCTGAGTGGGACTTaGCCAGGCTGTCTCCGCACC +
Preference number: 5 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKWLSGT*PGCLRT
Trigger: GGTGCGGAGACAGCCTGGCAAAGTCCCACTCAGCCA...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGGAGGAAATGGTGACCCGGACCCCCACCAAGCTGGACAGGCAGATGGTAGGCTTTGCAGCCTTTTGCTaGTCCCAGTCTCCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: LEEMVTRTPTKLDRQMVGFAAFC*SQSPSF
Trigger: GAAACTAGGAGACTGGGACAAGCAAAAGGCTGCAAA...GCCTACCATCTGCCTGTCCAGCTTGGTGGGGGTCCGGGTCACCATTTCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGTTTGCAGCCTTTTGCTaGTCCCAGTCTCCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: GRGTSAKTVLQQQAWQREFAAFC*SQSPSF
Trigger: GAAACTAGGAGACTGGGACAAGCAAAAGGCTGCAAA...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS TCA 90 bp CCAACTCCCCACACAGTAGTGACCACAGACAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAAGGCACAGACTCATATGCGAATGAA +
Preference number: 5 (lower is better)
Translates to: PTPHTVVTTDSDPAG*VALCCQGTDSYANE
Trigger: TTCATTCGCATATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCTGTCTGTGGTCACTACTGTGTGGGGAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000416856.5
ENST00000433667.5
ENST00000441627.5
ENST00000457123.5
ENST00000492001.1
ENST00000615423.1
CDS GCA 90 bp GTCCAAAGACTTAGGGGACTCAGGAGGCCCCATCCTCATATGTCATaGCTCAGCCTCTCTGTCCTCACCTCTCAGCCTCTTCGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: VQRLRGLRRPHPHMS*LSLSVLTSQPLRLS
Trigger: TGAGAGACGAAGAGGCTGAGAGGTGAGGACAGAGAGGCTGAGGCATGACATATGAGGATGGGGCCTCCTGAGTCCCCTAAGTCTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS-3UTR CAA 90 bp CCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAAGGAGCAGAGATGAGTGCAAGGAGTaGAGGTTGGGCTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: PPPIGGSSLICLHMGRSRDECKE*RLGLRS
Trigger: TGATCTCAAGCCCAACCTCAACTCCTTGCACTCATC...TCTGCTCCTTCCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATTGTGCGAGGTCTTGTaGTCGCCACGCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAELCEVL*SPRSMV
Trigger: CACCATCGAGCGTGGCGACAACAAGACCTCGCACAA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTGTCCCAGTCTCCTAGTTTCTCCACTCCATCCGGGAGCATCACGTTTGCAACAGGCTTGTGCGAGGTCTaGTTGTCGCCACGCTCGATG +
Preference number: 5 (lower is better)
Translates to: LSQSPSFSTPSGSITFATGLCEV*LSPRSM
Trigger: CATCGAGCGTGGCGACAACAAGACCTCGCACAAGCC...TGTTGCAAACGTGATGCTCCCGGATGGAGTGGAGAAACTAGGAGACTGGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGAGCAAAGCTGTCTTGTaGCACACAGGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGSKAVL*HTGHLQ
Trigger: TTGGAGGTGTCCTGTGTGCAACAAGACAGCTTTGCT...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAACCATCCGGCTCCTCCTaGATGTGCATGTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQPSGSS*MCMSGF
Trigger: GAAGCCTGACATGCACATCAAGGAGGAGCCGGATGG...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAAAGTAGCTCATCAGGGTaGGTCAGTTCCGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQSSSSG*VSSGSR
Trigger: CCTGCTCCCGGAACTGACCAACCCTGATGAGCTACT...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGAGACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: GRGTSAKTVLQQQAWQRETLCTL*CFVAPP
Trigger: TGGGGGAGCTACAAAGCACAACAATGTACATAGTGT...CTCCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGCAGGGGCACCTCAGCAAAAACCGTTCTGCAGCAGCAGGCTTGGCAGAGGGACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: WAGAPQQKPFCSSRLGRGTLCTL*CFVAPP
Trigger: TGGGGGAGCTACAAAGCACAACAATGTACATAGTGT...CCCTCTGCCAAGCCTGCTGCTGCAGAACGGTTTTTGCTGAGGTGCCCCTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCTGGCCCCCAGGTCCTGCACAAGCTTTGCAGGCACAGCCCAAGCTTTAGGCAGTCAGCTGAAGCCAACTaGGAAAATTCCAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: PGPQVLHKLCRHSPSFRQSAEAN*ENSREK
Trigger: CTTTTCCCTGGAATTTTCCAAGTTGGCTTCAGCTGA...CTGCCTAAAGCTTGGGCTGTGCCTGCAAAGCTTGTGCAGGACCTGGGGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS CCA 90 bp TGTGTGACCTGCATAGCCACATTCTTGCAGGTGAGGAGACTGATCTaGGGAGAGGAGCCATATGCCCAGGGTCATCTGAGGTTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: CVTCIATFLQVRRLI*GEEPYAQGHLRFKA
Trigger: AGCCTTGAACCTCAGATGACCCTGGGCATATGGCTCCTCTCCCCAGATCAGTCTCCTCACCTGCAAGAATGTGGCTATGCAGGTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480964.5
CDS-3UTR CAA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCTGAGTGGCGCTTTGTaGCCAAGGCACAGACTCATA +
Preference number: 5 (lower is better)
Translates to: WERSPLENLYTELNLRAHLSGAL*PRHRLI
Trigger: TATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAG...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCTGCAAGGAGTTGAGGTaGGGCTTGAGATCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: ARESLHRAESESPPTHLGCKELR*GLRSGK
Trigger: CTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCA...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACAAGTTCCGCTTTATCTaGGTGATGCAGTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHKFRFI*VMQCSA
Trigger: TGCTGAGCACTGCATCACCAAGATAAAGCGGAACTT...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp AGCTCACTGTCCCCCACCCATTGGAGGTTCCTCCCTGATCTGTCTGCACATGGGCCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 5 (lower is better)
Translates to: SSLSPTHWRFLPDLSAHGPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...CCCATGTGCAGACAGATCAGGGAGGAACCTCCAATGGGTGGGGGACAGTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGGATGGGCTTCTGGGTaGTTTGCAGCCTTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: ARESLHRAESESPPTHLGGWASG*FAAFCL
Trigger: CAAGCAAAAGGCTGCAAACAACCCAGAAGCCCATCC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS GCA 90 bp GGAAGCAGGAATCACCAAAGGGAACCAGCCAAACAACGTGCTTCATaGAGCAGCTCCAAAGTGCTAGAAACCAACAGGCCTGGCAAGTGG +
Preference number: 5 (lower is better)
Translates to: GSRNHQREPAKQRAS*SSSKVLETNRPGKW
Trigger: CCACTTGCCAGGCCTGTTGGTTTCTAGCACTTTGGAGCTGCTGCATGAAGCACGTTGTTTGGCTGGTTCCCTTTGGTGATTCCTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS-3UTR CAA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACGGTTCATGGAGTTCATaGGCAATGGAGCAGCCTACA +
Preference number: 5 (lower is better)
Translates to: WERSPLENLYTELNLRAHGSWSS*AMEQPT
Trigger: TGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACCCACCCACCTCGGCGGTTCATGGAGTTCATaGGCAATGGAGCAGCCTACA +
Preference number: 5 (lower is better)
Translates to: ARESLHRAESESPPTHLGGSWSS*AMEQPT
Trigger: TGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC...GCCGAGGTGGGTGGGTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCGCGGCTGTACACGCCTaGCTGCACGTAGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSAAVHA*LHVALV
Trigger: AACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGC...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGGCAAGAAGGGAGACTaGACCTCTTGGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAEGKKGD*TSWFGD
Trigger: GTCACCAAACCAAGAGGTCAAGTCTCCCTTCTTGCC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGGAGGGGCCCCAAGGTaGGAGGTGTGTAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: APLSQLLVFLHYVHCCALGGAPR*EVCSPG
Trigger: ACCAGGACTACACACCTCCAACCTTGGGGCCCCTCC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAAGAAAGCAGGTCGTCATaGTTGTTCGTAGGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAEESRSS*LFVGRS
Trigger: CGACCTCCCTACGAACAACAATGACGACCTGCTTTC...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTCCGCACCCAGCGACAGGACTGTGCGTGCTGCTGCTTCTTTTGTTTCCTCCACACACTATGTACATTGTaGTGCTTTGTAGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: LRTQRQDCACCCFFCFLHTLCTL*CFVAPP
Trigger: TGGGGGAGCTACAAAGCACAACAATGTACATAGTGT...GTGGAGGAAACAAAAGAAGCAGCAGCACGCACAGTCCTGTCGCTGGGTGCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGTGGCTGAGTGGGACTTaGCCAGGCTGTCTCCGCACC +
Preference number: 5 (lower is better)
Translates to: APLSQLLVFLHYVHCCALWLSGT*PGCLRT
Trigger: GGTGCGGAGACAGCCTGGCAAAGTCCCACTCAGCCA...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp TCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCACCAGGACACAGTCATTaGACACCCAAGAAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: SLLGKPGMLHKTALQLKPPGHSH*TPKKGG
Trigger: CCCTCCTTTCTTGGGTGTCAAATGACTGTGTCCTGG...TGGCTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGGGCTTCTGGGTTGTTaGCAGCCTTTTGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: KGNLGAQPARESLHRAESGLLGC*QPFACP
Trigger: GGGACAAGCAAAAGGCTGCAAACAACCCAGAAGCCC...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS TCA 90 bp GGTTCATGGAGTTCATTGGCAATGGAGCAGCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACTCAGCTGCTCTGGCTTTCTGAACGC +
Preference number: 5 (lower is better)
Translates to: GSWSSLAMEQPTGRV*QFLSGTQLLWLSER
Trigger: GCGTTCAGAAAGCCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413916.5
CDS TCA 90 bp GGTTCATGGAGTTCATTGGCAATGGAGCAGCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACTCAGCTGCTCTGGTCTTCACTGCAC +
Preference number: 5 (lower is better)
Translates to: GSWSSLAMEQPTGRV*QFLSGTQLLWSSLH
Trigger: GTGCAGTGAAGACCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCCATGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS GCA 90 bp CCTATGAGGAAGCAGGAATCACCAAAGGGAACCAGCCAAACAACGTaGTTCATGCAGCAGCTCCAAAGTGCTAGAAACCAACAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PMRKQESPKGTSQTT*FMQQLQSARNQQAW
Trigger: CCAGGCCTGTTGGTTTCTAGCACTTTGGAGCTGCTGCATGAAGCACGTTGTTTGGCTGGTTCCCTTTGGTGATTCCTGCTTCCTCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS-3UTR CAA 90 bp AAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTCTGAGTGGCGCTTTGTaGCCAAGGCACAGACTCATA +
Preference number: 5 (lower is better)
Translates to: KGNLGAQPARESLHRAESLSGAL*PRHRLI
Trigger: TATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAG...AGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTCCTCAATCATTTCTCCAGTCTTCTGAGGATGGGCTTCTGGGTTGTTTGCAGCTGGCTCTGTGTCGCGTaGCCAACTCCCCACACAGTA +
Preference number: 5 (lower is better)
Translates to: FLNHFSSLLRMGFWVVCSWLCVA*PTPHTV
Trigger: TACTGTGTGGGGAGTTGGCAACGCGACACAGAGCCA...GCTGCAAACAACCCAGAAGCCCATCCTCAGAAGACTGGAGAAATGATTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGGGCTTGTGCGAGGTCTaGTTGTCGCCACGCTCGATG +
Preference number: 5 (lower is better)
Translates to: APLSQLLVFLHYVHCCALGLCEV*LSPRSM
Trigger: CATCGAGCGTGGCGACAACAAGACCTCGCACAAGCC...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGAAAGCAGGTCGTCATaGTTGTTCGTAGGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKESRSS*LFVGRS
Trigger: CGACCTCCCTACGAACAACAATGACGACCTGCTTTC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp TGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCTGAGAGCCCACTGCCCAGTGGAGGAGTaGTTGAAACAGAAGGATCAA +
Preference number: 5 (lower is better)
Translates to: WERSPLENLYTELNLRAHCPVEE*LKQKDQ
Trigger: TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCA...GTGGGCTCTCAGATTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CCAGGCCCACCAAGAGGGAGTCCTTTAATAGAGATCGGCACAGACAGGAGACACGTGCTGCTGCTTCTTTaGTTTCCTCCACTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PGPPRGSPLIEIGTDRRHVLLLL*FPPLLF
Trigger: GAACAGAAGTGGAGGAAACAAAAGAAGCAGCAGCAC...GTGTCTCCTGTCTGTGCCGATCTCTATTAAAGGACTCCCTCTTGGTGGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGGATGAGTGCAAGGAGTaGAGGTTGGGCTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKDECKE*RLGLRS
Trigger: TGATCTCAAGCCCAACCTCAACTCCTTGCACTCATC...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGAGCAAAGCTGTCTTGTaGCACACAGGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKSKAVL*HTGHLQ
Trigger: TTGGAGGTGTCCTGTGTGCAACAAGACAGCTTTGCT...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGCCATCCGGCTCCTCCTaGATGTGCATGTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: APLSQLLVFLHYVHCCALPSGSS*MCMSGF
Trigger: GAAGCCTGACATGCACATCAAGGAGGAGCCGGATGG...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGAGTAGCTCATCAGGGTaGGTCAGTTCCGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: APLSQLLVFLHYVHCCALSSSSG*VSSGSR
Trigger: CCTGCTCCCGGAACTGACCAACCCTGATGAGCTACT...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATGCCCAGTGGAGGAGTaGTTGAAACAGAAGGATCAA +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAECPVEE*LKQKDQ
Trigger: TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp CTGCCAGATGCCCAGCTCTGCCCAGTGGAGGAGTTGTTGAAACAGAAGGATCAATGCCCAGTGGAGGAGTaGTTGAAACAGAAGGATCAA +
Preference number: 5 (lower is better)
Translates to: LPDAQLCPVEELLKQKDQCPVEE*LKQKDQ
Trigger: TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCA...TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCAGAGCTGGGCATCTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS-3UTR CAA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACTGCCCAGTGGAGGAGTaGTTGAAACAGAAGGATCAA +
Preference number: 5 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDCPVEE*LKQKDQ
Trigger: TTGATCCTTCTGTTTCAACAACTCCTCCACTGGGCA...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp TTGCAACAGGCAGGGCAGGTGGTGCATCAGATGTCCAGGACACAGTCATTTGACGTGCTGCTGCTTCTTTaGTTTCCTCCACTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: LQQAGQVVHQMSRTQSFDVLLLL*FPPLLF
Trigger: GAACAGAAGTGGAGGAAACAAAAGAAGCAGCAGCAC...GTCAAATGACTGTGTCCTGGACATCTGATGCACCACCTGCCCTGCCTGTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp ATGTCTCTCCTGGGCAAGCCTGGGATGCTTCACAAAACAGCTCTTCAGCTGAAGCCAGTGGAGGAGTTGTaGAAACAGAAGGATCAATGC +
Preference number: 5 (lower is better)
Translates to: MSLLGKPGMLHKTALQLKPVEEL*KQKDQC
Trigger: GCATTGATCCTTCTGTTTCAACAACTCCTCCACTGG...CTTCAGCTGAAGAGCTGTTTTGTGAAGCATCCCAGGCTTGCCCAGGAGAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp GAGAAGGGGAACTTGGGAGCGCAGCCCGCTAGAGAATCTTTACACAGAGCTGAATCAGCTGAAGCCAACTaGGAAAATTCCAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: EKGNLGAQPARESLHRAESAEAN*ENSREK
Trigger: CTTTTCCCTGGAATTTTCCAAGTTGGCTTCAGCTGA...TTCAGCTCTGTGTAAAGATTCTCTAGCGGGCTGCGCTCCCAAGTTCCCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS-3UTR CAA 90 bp ATGGCATCATACTGTATGAACTGTCTTGCTTTTTCATCCCACGTTGTTTCTGAGCCGGGAGCATCACGTTaGCAACAGGCAGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: MASYCMNCLAFSSHVVSEPGASR*QQAGQV
Trigger: CACCTGCCCTGCCTGTTGCAAACGTGATGCTCCCGG...CTCAGAAACAACGTGGGATGAAAAAGCAAGACAGTTCATACAGTATGATGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000441627.5
CDS GCA 90 bp GGGTTTTGCAGAAGTCGCTATTTGGAAAAGGGCATTTCTTCTCATTaGTGCCAAGGGAATTGGCCTTGGGACATTCCTAGGAGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GFCRSRYLEKGISSH*CQGNWPWDIPRSEG
Trigger: ACCTTCACTCCTAGGAATGTCCCAAGGCCAATTCCCTTGGCAGCAATGAGAAGAAATGCCCTTTTCCAAATAGCGACTTCTGCAAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463931.1
ENST00000482322.1
CDS-3UTR CAA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGAGCAAAGCTGTCTTGTaGCACACAGGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: APLSQLLVFLHYVHCCALSKAVL*HTGHLQ
Trigger: TTGGAGGTGTCCTGTGTGCAACAAGACAGCTTTGCT...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS GCA 90 bp TTTTGCAGAAGTCGCTATTTGGAAAAGGGCATTTCTTCTCATTGCTaGCAAGGGAATTGGCCTTGGGACATTCCTAGGAGTGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: FCRSRYLEKGISSHC*QGNWPWDIPRSEGL
Trigger: GAGACCTTCACTCCTAGGAATGTCCCAAGGCCAATTCCCTTGGCAGCAATGAGAAGAAATGCCCTTTTCCAAATAGCGACTTCTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463931.1
ENST00000482322.1
CDS-3UTR CAA 90 bp GCTCCCCTCTCCCAGCTGTTAGTGTTTCTACACTATGTACATTGTTGTGCTTTGAAGTTCCGCTTTATCTaGGTGATGCAGTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: APLSQLLVFLHYVHCCALKFRFI*VMQCSA
Trigger: TGCTGAGCACTGCATCACCAAGATAAAGCGGAACTT...CAAAGCACAACAATGTACATAGTGTAGAAACACTAACAGCTGGGAGAGGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
CDS GCA 72 bp GTCCCGTGGGGCCAGGCACGGACAGGGACTGGGTCATaGCCTGCTGCAGGGGCAGCCTGTGCCCAGGGTAGG +
Preference number: 6 (lower is better)
Translates to: VPWGQARTGTGS*PAAGAACAQGR
Trigger: CCTACCCTGGGCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTCCCTGTCCGTGCCTGGCCCCACGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000615423.1
CDS GCA 72 bp CACGTGGGCGGGGCTCACGGTGCGGCAGCGCTTCAGTaGTGGCCCATCCGGCTCCTCCTTGATGTGCATGTC +
Preference number: 6 (lower is better)
Translates to: HVGGAHGAAALQ*WPIRLLLDVHV
Trigger: GACATGCACATCAAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCCACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000480964.5
ENST00000492558.1
ENST00000615423.1
CDS GCA 72 bp CACCCGGCGCACCCAGGCTCCCAGGGAGGTAGGCTCTaGCCATGCACCCAGAAAGGGTACATGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: HPAHPGSQGGRL*PCTQKGYMASS
Trigger: GCTGCTGGCCATGTACCCTTTCTGGGTGCATGGGCAGAGCCTACCTCCCTGGGAGCCTGGGTGCGCCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478045.5
CDS CCA 72 bp GGGGCTGCCCAGGGCTGGGCGCAAACTGGGCGGTGCTaGGTGCATACTGGCCTCCTTGCAGATACTGCTGCC +
Preference number: 6 (lower is better)
Translates to: GAAQGWAQTGRC*VHTGLLADTAA
Trigger: GGCAGCAGTATCTGCAAGGAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000615423.1
CDS CCA 72 bp GTGGGCGGGGCTCACGGTGCGGCAGCGCTTCAGTGCTaGCCCATCCGGCTCCTCCTTGATGTGCATGTCAGG +
Preference number: 6 (lower is better)
Translates to: VGGAHGAAALQC*PIRLLLDVHVR
Trigger: CCTGACATGCACATCAAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGCACCGTGAGCCCCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000480964.5
ENST00000492558.1
ENST00000615423.1
CDS CAA 72 bp GCCCGGGATGGAACGGGTAGGCCCACTCAGGCCAGGTaGGCTGTAGCTGACGCTGCCCCCGTTGAAGCTGGC +
Preference number: 6 (lower is better)
Translates to: ARDGTGRPTQAR*AVADAAPVEAG
Trigger: GCCAGCTTCAACGGGGGCAGCGTCAGCTACAGCCAACCTGGCCTGAGTGGGCCTACCCGTTCCATCCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309315.9
ENST00000433667.5
ENST00000441627.5
ENST00000615423.1
CDS GCA 72 bp CAGGCACTGTGGGGAGGTCAAGGCGGAGCTGCCCCCTaGCACACCAGGCATCATGGAGCTGCCAGAGGGACT +
Preference number: 6 (lower is better)
Translates to: QALWGGQGGAAP*HTRHHGAARGT
Trigger: AGTCCCTCTGGCAGCTCCATGATGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCTCCCCACAGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000416856.5
ENST00000441627.5
ENST00000457123.5
ENST00000615423.1
CDS CCA 72 bp ACTGCCAAGTGCTGGGAGGCTCTGTCTGCTCGGGGGTaGGGCACCAGTGGGTGCTTACCTGGCTCTGTGTCG +
Preference number: 6 (lower is better)
Translates to: TAKCWEALSARG*GTSGCLPGSVS
Trigger: CGACACAGAGCCAGGTAAGCACCCACTGGTGCCCCACCCCCGAGCAGACAGAGCCTCCCAGCACTTGGCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS CAA 72 bp CTGACGCTGCCCCCGTTGAAGCTGGCGCCCTGCCCGTaGAACTGCTCTGTGGGCTGCGGGAGAGAAAACTGC +
Preference number: 6 (lower is better)
Translates to: LTLPPLKLAPCP*NCSVGCGRENC
Trigger: GCAGTTTTCTCTCCCGCAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCAGCTTCAACGGGGGCAGCGTCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463056.5
ENST00000478045.5
CDS CAA 90 bp CTCACGGTGCGGCAGCGCTTCAGTGCTGGCCCATCCGGCTCCTCCTaGATGTGCATGTCAGGCTTCACGGGCACTGGCTTCCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: LTVRQRFSAGPSGSS*MCMSGFTGTGFQLH
Trigger: GTGCAGCTGGAAGCCAGTGCCCGTGAAGCCTGACATGCACATCAAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGCACCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000480964.5
ENST00000492558.1
ENST00000615423.1
CDS TCA 72 bp GGCAGCGCTTCAGTGCTGGCCCATCCGGCTCCTCCTTaGTGTGCATGTCAGGCTTCACGGGCACTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: GSASVLAHPAPP*CACQASRALAS
Trigger: GGAAGCCAGTGCCCGTGAAGCCTGACATGCACATCAAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000480964.5
ENST00000492558.1
ENST00000615423.1
CDS GCA 72 bp GGGCAGACGCTGCCCTGCATACAAGGGTGTCATTCCTaGTGCCCGGGTGGGGTTCATAGCCAAGGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: GQTLPCIQGCHS*CPGGVHSQGGE
Trigger: CTCTCCCCCTTGGCTATGAACCCCACCCGGGCAGCAGGAATGACACCCTTGTATGCAGGGCAGCGTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000615423.1
CDS GCA 72 bp TCACCCGTAGGTCCTAAGCTCGCTTGGCCCAAGGACTaGCGGGACGCTGGGGGAGGGTTTGAATGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SPVGPKLAWPKD*RDAGGGFEWCS
Trigger: GCTGCACCATTCAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACCTACGGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000463931.1
ENST00000478045.5
ENST00000615423.1
CDS GCA 72 bp TCTCAGAGCTCTGAGGAGGCACTAAGCACTGCCAAGTaGTGGGAGGCTCTGTCTGCTCGGGGGTGGGGCACC +
Preference number: 6 (lower is better)
Translates to: SQSSEEALSTAK*WEALSARGWGT
Trigger: GGTGCCCCACCCCCGAGCAGACAGAGCCTCCCAGCACTTGGCAGTGCTTAGTGCCTCCTCAGAGCTCTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS CCA 72 bp GGAGCAGCCTACAGGCCGGGTCTGACAGTTTTTATCTaGAACTCAGCTGCTCTGGCTCCGCCCGGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: GAAYRPGLTVFI*NSAALAPPGLA
Trigger: GGCCAGGCCGGGCGGAGCCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000416856.5
CDS CAA 72 bp CGGCAGCGCTTCAGTGCTGGCCCATCCGGCTCCTCCTaGATGTGCATGTCAGGCTTCACGGGCACTGGCTTC +
Preference number: 6 (lower is better)
Translates to: RQRFSAGPSGSS*MCMSGFTGTGF
Trigger: GAAGCCAGTGCCCGTGAAGCCTGACATGCACATCAAGGAGGAGCCGGATGGGCCAGCACTGAAGCGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000480964.5
ENST00000492558.1
ENST00000615423.1
CDS TCA 72 bp CTCAGGAAGATGGGTGGACACCCAGAAAACGGGCCCTaGGAGTGTGGGAGGAGGAACAGAGCCTCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: LRKMGGHPENGP*ECGRRNRASWG
Trigger: CCCCCACGAGGCTCTGTTCCTCCTCCCACACTCTCAGGGCCCGTTTTCTGGGTGTCCACCCATCTTCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478045.5
CDS CCA 72 bp GTGGCGCAGGGGGCAGGGCAGGTTTCATGGGGTTCATaGAGTTCATTGGCAATGGAGCAGCCTACAGGCCGG +
Preference number: 6 (lower is better)
Translates to: VAQGAGQVSWGS*SSLAMEQPTGR
Trigger: CCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCCATGAACCCCATGAAACCTGCCCTGCCCCCTGCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000416856.5
ENST00000433667.5
ENST00000441627.5
ENST00000457123.5
ENST00000492001.1
CDS TCA 72 bp GTGGAGGCCCCACTGTCTGTTTCCTGGGACCATAGCTaGGACTGTGCCTTCACCGCCACGTCCCTGAGATGG +
Preference number: 6 (lower is better)
Translates to: VEAPLSVSWDHS*DCAFTATSLRW
Trigger: CCATCTCAGGGACGTGGCGGTGAAGGCACAGTCTCAGCTATGGTCCCAGGAAACAGACAGTGGGGCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463931.1
CDS CAA 72 bp AACGCCTGCTGTCCCAGGCACTGGCTCTGTGTCGCGTaGCCAACTCCCCACACAGTAGTGACCACAGACAGC +
Preference number: 6 (lower is better)
Translates to: NACCPRHWLCVA*PTPHTVVTTDS
Trigger: GCTGTCTGTGGTCACTACTGTGTGGGGAGTTGGCAACGCGACACAGAGCCAGTGCCTGGGACAGCAGGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413916.5
ENST00000433667.5
CDS GCA 72 bp CAGCTGCTCTGGTCTTCACTGCACAGGGGGATTTCCTaGCGACCCGAACTCATGCCTCTGGTCTCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: QLLWSSLHRGIS*RPELMPLVSSL
Trigger: CAGAGAGGAGACCAGAGGCATGAGTTCGGGTCGGCAGGAAATCCCCCTGTGCAGTGAAGACCAGAGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS CCA 72 bp CATCACCGTGTGGCGCAGGGGGCAGGGCAGGTTTCATaGGGTTCATGGAGTTCATTGGCAATGGAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: HHRVAQGAGQVS*GSWSSLAMEQP
Trigger: AGGCTGCTCCATTGCCAATGAACTCCATGAACCCCATGAAACCTGCCCTGCCCCCTGCGCCACACGGTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000416856.5
ENST00000433667.5
ENST00000441627.5
ENST00000457123.5
ENST00000492001.1
CDS CCA 72 bp TGGAGGTGTGTAGTCCTGGTGTCCCAGGATTGTGAGTaGGGTCCAGGTGACCTGCTGGTGCCATCTGGCTTG +
Preference number: 6 (lower is better)
Translates to: WRCVVLVSQDCE*GPGDLLVPSGL
Trigger: CAAGCCAGATGGCACCAGCAGGTCACCTGGACCCCACTCACAATCCTGGGACACCAGGACTACACACCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000463931.1
ENST00000478045.5
ENST00000482322.1
ENST00000615423.1
CDS CCA 72 bp GGGCAGGGCAGGTTTCATGGGGTTCATGGAGTTCATTaGCAATGGAGCAGCCTACAGGCCGGGTCTGACAGT +
Preference number: 6 (lower is better)
Translates to: GQGRFHGVHGVH*QWSSLQAGSDS
Trigger: ACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCCATGAACCCCATGAAACCTGCCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000416856.5
ENST00000433667.5
ENST00000441627.5
ENST00000457123.5
ENST00000492001.1
CDS CCA 72 bp CAAACAGTCAAGGCAGATTGCCAGGGTGGATGGGAGTaGAGTCTGTTCACGGCGCACCCACTGGGAACCATG +
Preference number: 6 (lower is better)
Translates to: QTVKADCQGGWE*SLFTAHPLGTM
Trigger: CATGGTTCCCAGTGGGTGCGCCGTGAACAGACTCCACTCCCATCCACCCTGGCAATCTGCCTTGACTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463056.5
ENST00000478045.5
CDS CCA 72 bp GGGTTGAGCACAAACAGTCAAGGCAGATTGCCAGGGTaGATGGGAGTGGAGTCTGTTCACGGCGCACCCACT +
Preference number: 6 (lower is better)
Translates to: GLSTNSQGRLPG*MGVESVHGAPT
Trigger: AGTGGGTGCGCCGTGAACAGACTCCACTCCCATCCACCCTGGCAATCTGCCTTGACTGTTTGTGCTCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463056.5
ENST00000478045.5
CDS GCA 72 bp AACTCGTCACAAGGCCCGCTTCCAGAGGGCGATGAGTaGAAGGAGTTGAGGTTGGGCTTGAGATCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: NSSQGPLPEGDE*KELRLGLRSGK
Trigger: CTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGCGGGCCTTGTGACGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000615423.1
CDS GCA 72 bp CTTAGGGGACTCAGGAGGCCCCATCCTCATATGTCATaGCTCAGCCTCTCTGTCCTCACCTCTCAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: LRGLRRPHPHMS*LSLSVLTSQPL
Trigger: AAGAGGCTGAGAGGTGAGGACAGAGAGGCTGAGGCATGACATATGAGGATGGGGCCTCCTGAGTCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS CCA 72 bp GGAGCAGCCTACAGGCCGGGTCTGACAGTTTTTATCTaGAACTCAGCTGCTCTGGTCTTCACTGCACAGGGG +
Preference number: 6 (lower is better)
Translates to: GAAYRPGLTVFI*NSAALVFTAQG
Trigger: CCCCTGTGCAGTGAAGACCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS TCA 72 bp CACACAGTAGTGACCACAGACAGCGATCCAGCCGGCTaGGTGGCGCTTTGTTGCCAAGGCACAGACTCATAT +
Preference number: 6 (lower is better)
Translates to: HTVVTTDSDPAG*VALCCQGTDSY
Trigger: ATATGAGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCTGTCTGTGGTCACTACTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000416856.5
ENST00000433667.5
ENST00000441627.5
ENST00000457123.5
ENST00000492001.1
ENST00000615423.1
CDS CCA 72 bp TGCATAGCCACATTCTTGCAGGTGAGGAGACTGATCTaGGGAGAGGAGCCATATGCCCAGGGTCATCTGAGG +
Preference number: 6 (lower is better)
Translates to: CIATFLQVRRLI*GEEPYAQGHLR
Trigger: CCTCAGATGACCCTGGGCATATGGCTCCTCTCCCCAGATCAGTCTCCTCACCTGCAAGAATGTGGCTATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480964.5
CDS CAA 90 bp TCACAAGGCCCGCTTCCAGAGGGCGATGAGTGCAAGGAGTTGAGGTaGGGCTTGAGATCAGGCAAGAAGGGAGACTTGACCTCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: SQGPLPEGDECKELR*GLRSGKKGDLTSWF
Trigger: AAACCAAGAGGTCAAGTCTCCCTTCTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGCGGGCCTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000433667.5
ENST00000441627.5
ENST00000463056.5
ENST00000478045.5
ENST00000615423.1
CDS TCA 72 bp AGTTCATTGGCAATGGAGCAGCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACTCAGCTGCTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SSLAMEQPTGRV*QFLSGTQLLWL
Trigger: GAGCCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309315.9
ENST00000416856.5
CDS TCA 72 bp AGTTCATTGGCAATGGAGCAGCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACTCAGCTGCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SSLAMEQPTGRV*QFLSGTQLLWL
Trigger: CAGCCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441627.5
CDS TCA 72 bp AGTTCATTGGCAATGGAGCAGCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACTCAGCTGCTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: SSLAMEQPTGRV*QFLSGTQLLWL
Trigger: AAGCCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413916.5
CDS TCA 72 bp AGTTCATTGGCAATGGAGCAGCCTACAGGCCGGGTCTaGCAGTTTTTATCTGGAACTCAGCTGCTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: SSLAMEQPTGRV*QFLSGTQLLWS
Trigger: AGACCAGAGCAGCTGAGTTCCAGATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS CCA 72 bp GGCAGGTTTCATGGGGTTCATGGAGTTCATTGGCAATaGAGCAGCCTACAGGCCGGGTCTGACAGTTTTTAT +
Preference number: 6 (lower is better)
Translates to: GRFHGVHGVHWQ*SSLQAGSDSFY
Trigger: ATAAAAACTGTCAGACCCGGCCTGTAGGCTGCTCCATTGCCAATGAACTCCATGAACCCCATGAAACCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265346.11
ENST00000309315.9
ENST00000413916.5
ENST00000416856.5
ENST00000433667.5
ENST00000441627.5
ENST00000457123.5
ENST00000492001.1
CDS CAA 72 bp CACACTAAGCATCAAGGGATGCCCTCTGGTTCTAGCTaGCCAGAACTTGGTGGTGAGTCTGTGTCCATCCTA +
Preference number: 6 (lower is better)
Translates to: HTKHQGMPSGSS*PELGGESVSIL
Trigger: TAGGATGGACACAGACTCACCACCAAGTTCTGGCAAGCTAGAACCAGAGGGCATCCCTTGATGCTTAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS CAA 90 bp TCCTGTTTCCACACTAAGCATCAAGGGATGCCCTCTGGTTCTAGCTaGCCAGAACTTGGTGGTGAGTCTGTGTCCATCCTATCCGTAATC +
Preference number: 6 (lower is better)
Translates to: SCFHTKHQGMPSGSS*PELGGESVSILSVI
Trigger: GATTACGGATAGGATGGACACAGACTCACCACCAAGTTCTGGCAAGCTAGAACCAGAGGGCATCCCTTGATGCTTAGTGTGGAAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS GCA 72 bp ACACTAAGCATCAAGGGATGCCCTCTGGTTCTAGCTTaGCAGAACTTGGTGGTGAGTCTGTGTCCATCCTAT +
Preference number: 6 (lower is better)
Translates to: TLSIKGCPLVLA*QNLVVSLCPSY
Trigger: ATAGGATGGACACAGACTCACCACCAAGTTCTGGCAAGCTAGAACCAGAGGGCATCCCTTGATGCTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS GCA 72 bp TTCACTTCTCCTGTTTCCACACTAAGCATCAAGGGATaGCCTCTGGTTCTAGCTTGCCAGAACTTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: FTSPVSTLSIKG*PLVLACQNLVV
Trigger: CACCACCAAGTTCTGGCAAGCTAGAACCAGAGGGCATCCCTTGATGCTTAGTGTGGAAACAGGAGAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457123.5
CDS GCA 72 bp AATCACCAAAGGGAACCAGCCAAACAACGTGCTTCATaGAGCAGCTCCAAAGTGCTAGAAACCAACAGGCCT +
Preference number: 6 (lower is better)
Translates to: NHQREPAKQRAS*SSSKVLETNRP
Trigger: AGGCCTGTTGGTTTCTAGCACTTTGGAGCTGCTGCATGAAGCACGTTGTTTGGCTGGTTCCCTTTGGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS CAA 72 bp CCCCAGGAAGCTGGAACCCACAAACAACAGCGGGTTTaGCAGAAGTCGCTATTTGGAAAAGGGCATTTCTTC +
Preference number: 6 (lower is better)
Translates to: PQEAGTHKQQRV*QKSLFGKGHFF
Trigger: GAAGAAATGCCCTTTTCCAAATAGCGACTTCTGCAAAACCCGCTGTTGTTTGTGGGTTCCAGCTTCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463931.1
CDS GCA 72 bp CCCAGGAAGCTGGAACCCACAAACAACAGCGGGTTTTaGAGAAGTCGCTATTTGGAAAAGGGCATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PRKLEPTNNSGF*RSRYLEKGISS
Trigger: AGAAGAAATGCCCTTTTCCAAATAGCGACTTCTGCAAAACCCGCTGTTGTTTGTGGGTTCCAGCTTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463931.1
CDS GCA 72 bp AAGCAGGAATCACCAAAGGGAACCAGCCAAACAACGTaGTTCATGCAGCAGCTCCAAAGTGCTAGAAACCAA +
Preference number: 6 (lower is better)
Translates to: KQESPKGTSQTT*FMQQLQSARNQ
Trigger: TTGGTTTCTAGCACTTTGGAGCTGCTGCATGAAGCACGTTGTTTGGCTGGTTCCCTTTGGTGATTCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492001.1
CDS CAA 72 bp GGACTTGCAGTGCTCACCCACAAACAACAGCGGGTTTaGCAGAAGTCGCTATTTGGAAAAGGGCATTTCTTC +
Preference number: 6 (lower is better)
Translates to: GLAVLTHKQQRV*QKSLFGKGHFF
Trigger: GAAGAAATGCCCTTTTCCAAATAGCGACTTCTGCAAAACCCGCTGTTGTTTGTGGGTGAGCACTGCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482322.1
CDS GCA 72 bp AGTCGCTATTTGGAAAAGGGCATTTCTTCTCATTGCTaGCAAGGGAATTGGCCTTGGGACATTCCTAGGAGT +
Preference number: 6 (lower is better)
Translates to: SRYLEKGISSHC*QGNWPWDIPRS
Trigger: ACTCCTAGGAATGTCCCAAGGCCAATTCCCTTGGCAGCAATGAGAAGAAATGCCCTTTTCCAAATAGCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463931.1
ENST00000482322.1
CDS GCA 72 bp AGAAGTCGCTATTTGGAAAAGGGCATTTCTTCTCATTaGTGCCAAGGGAATTGGCCTTGGGACATTCCTAGG +
Preference number: 6 (lower is better)
Translates to: RSRYLEKGISSH*CQGNWPWDIPR
Trigger: CCTAGGAATGTCCCAAGGCCAATTCCCTTGGCAGCAATGAGAAGAAATGCCCTTTTCCAAATAGCGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463931.1
ENST00000482322.1
CDS GCA 72 bp GACTTGCAGTGCTCACCCACAAACAACAGCGGGTTTTaGAGAAGTCGCTATTTGGAAAAGGGCATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: DLQCSPTNNSGF*RSRYLEKGISS
Trigger: AGAAGAAATGCCCTTTTCCAAATAGCGACTTCTGCAAAACCCGCTGTTGTTTGTGGGTGAGCACTGCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482322.1