RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMIZ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108175

Ensembl transcript IDs: ENST00000334512.10, ENST00000472035.5, ENST00000478357.1, ENST00000611351.1

Found 746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGTGGTGGGTGGTGGTGGGTGGGCTGGTCTCACTGCCACCAACTaGCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCGGGG +
Preference number: 1 (lower is better)
Translates to: SVVGGGGWAGLTATN*QCSSKARGPCWGPG
Trigger: CCCCGGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp GGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATaGGCCCAAGCCAAGGGTGTGGAGGTGGGACGTGGGCTCCAGACC +
Preference number: 1 (lower is better)
Translates to: GWFLSGGWSSGLRWA*AQAKGVEVGRGLQT
Trigger: GGTCTGGAGCCCACGTCCCACCTCCACACCCTTGGCTTGGGCCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp CGGAGGGACCGGGAAGCCGCATCAGCGTGTGCCCTCTTACCGGGCTaGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGG +
Preference number: 1 (lower is better)
Translates to: RRDREAASACALLPG*FLSGGWSSGLRWAW
Trigger: CCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTAAGAGGGCACACGCTGATGCGGCTTCCCGGTCCCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp ACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTaGGGCCCGGGGGCCTTCTCAGGCTCCACAGTCACTGGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: TATNCQCSSKARGPC*GPGAFSGSTVTGGR
Trigger: CCTCCCTCCAGTGACTGTGGAGCCTGAGAAGGCCCCCGGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp TTACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTaGGCATGGGCCCAAGCCAAGGGTGTGGAGGTGGGACGTGGGCTC +
Preference number: 1 (lower is better)
Translates to: LPGWFLSGGWSSGLR*AWAQAKGVEVGRGL
Trigger: GAGCCCACGTCCCACCTCCACACCCTTGGCTTGGGCCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 90 bp CTGGAATCGGCACACGCGGAGGGACCGGGAAGCCGCATCAGCGTGTaGCCTCTTACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGG +
Preference number: 1 (lower is better)
Translates to: LESAHAEGPGSRISV*PLTGLVPLGRVVFR
Trigger: CCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTAAGAGGGCACACGCTGATGCGGCTTCCCGGTCCCTCCGCGTGTGCCGATTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp AGCCGGAAGGGAAGCTCTGGGCCGAGCTTGCTGGTGGAGGCTTGCTaGAGAGGGGACCCAGGAAACCCGCCTCAGGTGCTGAGCCCAGAG +
Preference number: 1 (lower is better)
Translates to: SRKGSSGPSLLVEAC*RGDPGNPPQVLSPE
Trigger: CTCTGGGCTCAGCACCTGAGGCGGGTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp GGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGGCCGAGCTTGCTGGTaGAGGCTTGCTGGAGAGGGGACCCAGGAAACCCGCCTCAGGTGC +
Preference number: 1 (lower is better)
Translates to: GSEPAGREALGRACW*RLAGEGTQETRLRC
Trigger: GCACCTGAGGCGGGTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGGCTGGCTCTGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp TGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGTCCATCTTGCGGAGTaGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGGCATGG +
Preference number: 1 (lower is better)
Translates to: WPFPPACWLPVHLAE*RQKHACGPGGCLAW
Trigger: CCATGCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp CGTGGCCACTTGCCAGGCCACAGACACTGGGCAAGGGTGGCCACATaGTACCTGGCGTTGGCTTGTCCCTGCCAGCTGACTGAGGGATGG +
Preference number: 1 (lower is better)
Translates to: RGHLPGHRHWARVAT*YLALACPCQLTEGW
Trigger: CCATCCCTCAGTCAGCTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCTGTGGCCTGGCAAGTGGCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp CTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGTCCATCTTaGGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTT +
Preference number: 1 (lower is better)
Translates to: LYLALPACLLAPCPS*GVAAETCLWAGWML
Trigger: AAGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp CTGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTaGTCCCGCCCCGGATGCCTCTGCACCTCCCTCACACCCTGGCCT +
Preference number: 1 (lower is better)
Translates to: LFMGVVYLHLSQPGA*SRPGCLCTSLTPWP
Trigger: AGGCCAGGGTGTGAGGGAGGTGCAGAGGCATCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp AGATGGTCTGACACAGGGCGTGGCCACTTGCCAGGCCACAGACACTaGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGC +
Preference number: 1 (lower is better)
Translates to: RWSDTGRGHLPGHRH*ARVATCYLALACPC
Trigger: GCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTGTGTCAGACCATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR TCA 90 bp GGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGCTGACTaGGGGATGGCTCTAAATAGCGGGCTGCCCGGTCTTCCAACTCCC +
Preference number: 1 (lower is better)
Translates to: GGHMLPGVGLSLPAD*GMALNSGLPGLPTP
Trigger: GGGAGTTGGAAGACCGGGCAGCCCGCTATTTAGAGCCATCCCTCAGTCAGCTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp TTTGTGCTTTTCTGTGGTGGGTGGTGGTGGGTGGGCTGGTCTCACTaGCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTG +
Preference number: 1 (lower is better)
Translates to: FVLFCGGWWWVGWSH*HQLPVLLQGSGPML
Trigger: CAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGAAAAGCACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp TCCCAGAGGTTTGTGCTTTTCTGTGGTGGGTGGTGGTGGGTGGGCTaGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGG +
Preference number: 1 (lower is better)
Translates to: SQRFVLFCGGWWWVG*SHCHQLPVLLQGSG
Trigger: CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGAAAAGCACAAACCTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp CTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTaGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCC +
Preference number: 1 (lower is better)
Translates to: LAPCPSCGVAAETCL*AGWMLGMEKWLAEA
Trigger: GGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp TGCCTGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATaGCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCA +
Preference number: 1 (lower is better)
Translates to: CLLAPCPSCGVAAET*LWAGWMLGMEKWLA
Trigger: TGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp AAGAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTaGTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCC +
Preference number: 1 (lower is better)
Translates to: KKMGVIACTWPFPPA*WLPVHLAEWRQKHA
Trigger: GGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTaGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGT +
Preference number: 1 (lower is better)
Translates to: KMGVIACTWPFPPAC*LPVHLAEWRQKHAC
Trigger: ACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp AACCAAGAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTaGCTGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACA +
Preference number: 1 (lower is better)
Translates to: NQEDGGDCLYLALPA*LLAPCPSCGVAAET
Trigger: TGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTCTTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp AGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGGGACAACCTaGCATCACCCTAGGCCATGTGGCTCACGGGGCACAGACCAGCCT +
Preference number: 1 (lower is better)
Translates to: RAQRIYRWDPSDGTT*HHPRPCGSRGTDQP
Trigger: AGGCTGGTCTGTGCCCCGTGAGCCACATGGCCTAGGGTGATGCCAGGTTGTCCCGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 90 bp CTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTaGACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGATGCCTCT +
Preference number: 1 (lower is better)
Translates to: LSRVQDHLCLWALST*TCHNLGLAPAPDAS
Trigger: AGAGGCATCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp GTCTTTCCCAGAGGTTTGTGCTTTTCTGTGGTGGGTGGTGGTGGGTaGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCT +
Preference number: 1 (lower is better)
Translates to: VFPRGLCFSVVGGGG*AGLTATNCQCSSKA
Trigger: AGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGAAAAGCACAAACCTCTGGGAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp GACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTaGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTTCT +
Preference number: 1 (lower is better)
Translates to: DGSGPRPVGSRPVAL*GIRASIREKVLAVS
Trigger: AGAAACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 90 bp GGGCTCTGGTTTCTGCACCTCCCCGGCCTTTCCACGCACTGCCCTTaGCATCTGATTGGACAAAGAGAACTAGGACAGAGGGAAGTGGGT +
Preference number: 1 (lower is better)
Translates to: GLWFLHLPGLSTHCP*HLIGQRELGQREVG
Trigger: ACCCACTTCCCTCTGTCCTAGTTCTCTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGAAAGGCCGGGGAGGTGCAGAAACCAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 90 bp TGCCCTGGGCTCTGGTTTCTGCACCTCCCCGGCCTTTCCACGCACTaGCCTTGCCATCTGATTGGACAAAGAGAACTAGGACAGAGGGAA +
Preference number: 1 (lower is better)
Translates to: CPGLWFLHLPGLSTH*PCHLIGQRELGQRE
Trigger: TTCCCTCTGTCCTAGTTCTCTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGAAAGGCCGGGGAGGTGCAGAAACCAGAGCCCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp CGTTGTCTTTCCCAGAGGTTTGTGCTTTTCTGTGGTGGGTGGTGGTaGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAA +
Preference number: 1 (lower is better)
Translates to: RCLSQRFVLFCGGWW*VGWSHCHQLPVLLQ
Trigger: TTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGAAAAGCACAAACCTCTGGGAAAGACAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp TGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTaGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTTTTTG +
Preference number: 1 (lower is better)
Translates to: CPSCGVAAETCLWAG*MLGMEKWLAEASFL
Trigger: CAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR TCA 90 bp GGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTaGGCAGAGTGTGGACACACCCTGATAAGAACCAGAATGAATCCC +
Preference number: 1 (lower is better)
Translates to: GSISTLRTGKPWIHL*AECGHTLIRTRMNP
Trigger: GGGATTCATTCTGGTTCTTATCAGGGTGTGTCCACACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp GGCTCTGGACCAGGAAGCAGGGAGGCAGGGTTACAGTCTAGAAGATaGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACA +
Preference number: 1 (lower is better)
Translates to: GSGPGSREAGLQSRR*KNLGDTGRSSGIGT
Trigger: TGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTCTAGACTGTAACCCTGCCTCCCTGCTTCCTGGTCCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 90 bp CCTAAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATaGTCTGACACAGGGCGTGGCCACTTGCCAGGCCACAGACACTGG +
Preference number: 1 (lower is better)
Translates to: PKEGICKSVWSLIPR*SDTGRGHLPGHRHW
Trigger: CCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp GGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATaGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCC +
Preference number: 1 (lower is better)
Translates to: GSGKDLSRVQDHLCL*ALSTCTCHNLGLAP
Trigger: GGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp GACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGTaGACACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTG +
Preference number: 1 (lower is better)
Translates to: DSPHWKAVDPPVSRV*THPDKNQNESQAFL
Trigger: CAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTGTCCACACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp GCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTaGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCA +
Preference number: 1 (lower is better)
Translates to: AETCLWAGWMLGMEK*LAEASFLLRLLMAP
Trigger: TGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR TCA 90 bp GTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTaGGTCGCTGCTGTTGACACGGCCCTGTGTGGACGGGTCAGGCCC +
Preference number: 1 (lower is better)
Translates to: VDTSLFLIYICTHVP*VAAVDTALCGRVRP
Trigger: GGGCCTGACCCGTCCACACAGGGCCGTGTCAACAGCAGCGACTCAAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR TCA 90 bp GGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTaGGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGA +
Preference number: 1 (lower is better)
Translates to: GCLAWKSGLQRPRFC*GYLWLQVVVRKDQG
Trigger: TCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp ACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCTaGAGCTTAATTCCCAGATGGTCTGACACAGGGCGTGGCCACTTG +
Preference number: 1 (lower is better)
Translates to: TQEARTPKEGICKSV*SLIPRWSDTGRGHL
Trigger: CAAGTGGCCACGCCCTGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp TGTGGACACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTaGGGCAAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGC +
Preference number: 1 (lower is better)
Translates to: CGHTLIRTRMNPRPF*GKVSTQEARTPKEG
Trigger: GCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTGTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 90 bp TCCACTCAGGGTCAGAGTATATTACATGAGCGAGAGAGACAGACGTaGAGAACTCACAAATGCTATAACCAACAGGATCTAGTTTTTCCA +
Preference number: 1 (lower is better)
Translates to: STQGQSILHERERQT*RTHKCYNQQDLVFP
Trigger: TGGAAAAACTAGATCCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTAATATACTCTGACCCTGAGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 90 bp AGTATATTACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATaGTATAACCAACAGGATCTAGTTTTTCCACGTGATGGAGTTCCA +
Preference number: 1 (lower is better)
Translates to: SILHERERQTWRTHK*YNQQDLVFPRDGVP
Trigger: TGGAACTCCATCACGTGGAAAAACTAGATCCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTAATATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGGAGGTGCCCGGGGCCTaGGCTGCAGGGAGCATCTCG +
Preference number: 2 (lower is better)
Translates to: RVRPEARREQTCSSLGDQEVPGA*AAGSIS
Trigger: CGAGATGCTCCCTGCAGCCCAGGCCCCGGGCACCTC...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCCAAGGGTGTGGAGGTaGGACGTGGGCTCCAGACCC +
Preference number: 2 (lower is better)
Translates to: GRVRPEARREQTCSSLGDPRVWR*DVGSRP
Trigger: GGGTCTGGAGCCCACGTCCCACCTCCACACCCTTGG...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGGTGGCGGCAGAAACATaGCTGTGGGCCGGGTGGATG +
Preference number: 2 (lower is better)
Translates to: RVRPEARREQTCSSLGDQVAAET*LWAGWM
Trigger: CATCCACCCGGCCCACAGGCATGTTTCTGCCGCCAC...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATGCCTTCCTGGTGCACTaGTGCACCCTCCCTACCCCT +
Preference number: 2 (lower is better)
Translates to: GRVRPEARREQTCSSLGDAFLVH*CTLPTP
Trigger: AGGGGTAGGGAGGGTGCACCAGTGCACCAGGAAGGC...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGTTCCTCTCGGGAGGGTaGTCTTCAGGCCTGCGCTGG +
Preference number: 2 (lower is better)
Translates to: RVRPEARREQTCSSLGDQFLSGG*SSGLRW
Trigger: CCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAA...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CAA 90 bp CCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGTCCATCTaGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCT +
Preference number: 2 (lower is better)
Translates to: PVLGPSRLPAGSLSI*RSGGRNMPVGRVDA
Trigger: AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR GCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGCAGGGCGTGGCCACTTaGCAGGCCACAGACACTGGG +
Preference number: 2 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPQGVAT*QATDTG
Trigger: CCCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTG...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTGGCCTGCGCTGGGCATaGGCCCAAGCCAAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAGLRWA*AQAKGV
Trigger: CACACCCTTGGCTTGGGCCCATGCCCAGCGCAGGCC...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR TCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCCTACCCCTCTGTTCTaGGAGGGCTGCAGCGGGGGA +
Preference number: 2 (lower is better)
Translates to: KMGVIACTWPFPPACWLPPTPLF*EGCSGG
Trigger: TCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGCCACCAACTGCCAGTaGTCCTCCAAGGCTCGGGGC +
Preference number: 2 (lower is better)
Translates to: KMGVIACTWPFPPACWLPATNCQ*SSKARG
Trigger: GCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGC...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCCCCACACAGCCTTCCTaGTGCACTGGTGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: EDGGDCLYLALPACLLAPPTQPS*CTGAPS
Trigger: GGAGGGTGCACCAGTGCACCAGGAAGGCTGTGTGGG...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGGCCCTCTTACCGGGCTaGTTCCTCTCGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: RHWARVATCYLALACPCQALLPG*FLSGGW
Trigger: CCACCCTCCCGAGAGGAACCAGCCCGGTAAGAGGGC...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGCGTTGGCTTGTCCCTaGCAGCTGACTGAGGGATGG +
Preference number: 2 (lower is better)
Translates to: LQAVGTTHGSEPAGREALALACP*QLTEGW
Trigger: CCATCCCTCAGTCAGCTGGCAGGGACAAGCCAACGC...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTGTAGGATGCAGAGTGTaGAGGGATGGCCCCGACCGG +
Preference number: 2 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAVGCRV*RDGPDR
Trigger: CCGGTCGGGGCCATCCCTCCACACTCTGCATCCTAC...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGTGGAGGTGGGACGTaGGCTCCAGACCCACACAGC +
Preference number: 2 (lower is better)
Translates to: LSILRSGGRNMPVGRVDACGGGT*APDPHS
Trigger: GCTGTGTGGGTCTGGAGCCCACGTCCCACCTCCACA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCGCCTCAGGGACGTCCTaGCTCAGAAGATGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: EDGGDCLYLALPACLLAPASGTS*LRRCPG
Trigger: GCCAGGACATCTTCTGAGCCAGGACGTCCCTGAGGC...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGACACTGGGCAAGGGTaGCCACATGCTACCTGGCGT +
Preference number: 2 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPDTGQG*PHATWR
Trigger: ACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTC...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCCACTGGAAGGTCATCTaGAATCGGCACACGCGGAGG +
Preference number: 2 (lower is better)
Translates to: EDGGDCLYLALPACLLAPHWKVI*NRHTRR
Trigger: CCTCCGCGTGTGCCGATTCCAGATGACCTTCCAGTG...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR TCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGAGCTCCTGTTTGCTTCTaGCAGGTTATATGCCCGCGC +
Preference number: 2 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGAPVCF*QVICPR
Trigger: GCGCGGGCATATAACCTGTCAGAAGCAAACAGGAGC...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCCAAACCGATGACCCCTaGCCCCCGAGAGACGTTGTC +
Preference number: 2 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSQTDDP*PPRDVV
Trigger: GACAACGTCTCTCGGGGGCCAGGGGTCATCGGTTTG...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CAA 90 bp GTCTGGAGCTTAATTCCCAGATGGTCTGACACAGGGCGTGGCCACTaGCCAGGCCACAGACACTGGGCAAGGGTGGCCACATGCTACCTG +
Preference number: 2 (lower is better)
Translates to: VWSLIPRWSDTGRGH*PGHRHWARVATCYL
Trigger: CAGGTAGCATGTGGCCACCCTTGCCCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTGTGTCAGACCATCTGGGAATTAAGCTCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR TCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCTGCCGTCTGGGACAGTaGCTGGAAGTCAACAGCTGG +
Preference number: 2 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPCRLGQ*LEVNSW
Trigger: CCAGCTGTTGACTTCCAGTCACTGTCCCAGACGGCA...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR GCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCTCACTGCCACCAACTaGCAGTGCTCCTCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: RACLQTAGCRHHARFRASLTATN*QCSSKA
Trigger: AGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAG...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGAACCTTGGGGACACTaGAAGGTCATCTGGAATCGG +
Preference number: 2 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAEPWGH*KVIWNR
Trigger: CCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTC...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CAA 90 bp GGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTaGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCG +
Preference number: 2 (lower is better)
Translates to: GKDLSRVQDHLCLWA*STCTCHNLGLAPAP
Trigger: CGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR TCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCTTGTCCCTGCCAGCTaGCTGAGGGATGGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: RACLQTAGCRHHARFRASLVPAS*LRDGSK
Trigger: TTTAGAGCCATCCCTCAGTCAGCTGGCAGGGACAAG...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR GCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGACACAGCCTTCCTGGTaGACTGGTGCACCCTCCCTA +
Preference number: 2 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVTQPSW*TGAPSL
Trigger: TAGGGAGGGTGCACCAGTGCACCAGGAAGGCTGTGT...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGTTGGGTGTACACCTaGTCTCTCTGTTCCCCAAGC +
Preference number: 2 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPGWVYT*SLCSPS
Trigger: GCTTGGGGAACAGAGAGAGCAGGTGTACACCCAACC...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCGCACAGGCTCCCAGGTaGAAAAGTGTGTTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSAQAPR*KSVLGR
Trigger: CCTACCCAACACACTTTTCCACCTGGGAGCCTGTGC...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATTTACAGTCTAGAAGATaGAAGAACCTTGGGGACACT +
Preference number: 2 (lower is better)
Translates to: GRVRPEARREQTCSSLGDLQSRR*KNLGDT
Trigger: AGTGTCCCCAAGGTTCTTCCATCTTCTAGACTGTAA...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGCTCGGGGCCCATGCTaGGGCCCGGGGGCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SERIREGSLQSSGPSLFMARGPC*GPGAFS
Trigger: TGAGAAGGCCCCCGGGCCCCAGCATGGGCCCCGAGC...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGGTCCCCAAGCAGGAATaGCAGACCCCCTCTCAAACA +
Preference number: 2 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTVPKQE*QTPSQT
Trigger: TGTTTGAGAGGGGGTCTGCCATTCCTGCTTGGGGAC...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CAA 90 bp TGGGCTCTGGTTTCTGCACCTCCCCGGCCTTTCCACGCACTGCCCTaGCCATCTGATTGGACAAAGAGAACTAGGACAGAGGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: WALVSAPPRPFHALP*PSDWTKRTRTEGSG
Trigger: CCCACTTCCCTCTGTCCTAGTTCTCTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGAAAGGCCGGGGAGGTGCAGAAACCAGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR TCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCAGGCCTCGTTTTTGCTaGGGTTACTTATGGCTCCAA +
Preference number: 2 (lower is better)
Translates to: EDGGDCLYLALPACLLAPRPRFC*GYLWLQ
Trigger: TTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCT...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CAA 90 bp CAGGAAGCAGGGAGGCAGGGTTACAGTCTAGAAGATGGAAGAACCTaGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGGAGGGA +
Preference number: 2 (lower is better)
Translates to: QEAGRQGYSLEDGRT*GTLEGHLESAHAEG
Trigger: TCCCTCCGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTCTAGACTGTAACCCTGCCTCCCTGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCGGAGAGAAATGGTTTaGTTGCTGTCCAAGAGCAAC +
Preference number: 2 (lower is better)
Translates to: KMGVIACTWPFPPACWLPRREMV*LLSKSN
Trigger: GTTGCTCTTGGACAGCAAGCAAACCATTTCTCTCCG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGCCAGAGGCTGCTTTTaGTTGAGTGAGCAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPARGCF*LSEQEF
Trigger: AAACTCCTGCTCACTCAAGCAAAAGCAGCCTCTGGC...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCTGTGGTGGGTGGTGGTaGGTGGGCTGGTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTCGGWW*VGWSHC
Trigger: GCAGTGAGACCAGCCCACCCACCACCACCCACCACA...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGTTTATGGGGTATCTTaGCTTATAGGTCAGGGGTCA +
Preference number: 2 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPVYGVS*LIGQGS
Trigger: TGACCCCTGACCTATAAGCCAAGATACCCCATAAAC...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCCTGTGAGCAGAGTGTaGACACACCCTGATAAGAAC +
Preference number: 2 (lower is better)
Translates to: RACLQTAGCRHHARFRASPVSRV*THPDKN
Trigger: GTTCTTATCAGGGTGTGTCCACACTCTGCTCACAGG...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CAA 90 bp ATGGATAAAGCTTCAAACCAAGAAGATGGGGGTGATTGCCTGTACTaGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGTCCATCTTGCGGA +
Preference number: 2 (lower is better)
Translates to: MDKASNQEDGGDCLY*ALPACLLAPCPSCG
Trigger: TCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTCTTGGTTTGAAGCTTTATCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR GCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCAGCCGCATCAGCGTGTaGCCTCTTACCGGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTSRISV*PLTGLV
Trigger: AACCAGCCCGGTAAGAGGGCACACGCTGATGCGGCT...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTTCTTCAGGCCTGCGCTaGGCATGGGCCCAAGCCAAG +
Preference number: 2 (lower is better)
Translates to: PVALWGIRASIREKVLAVSSGLR*AWAQAK
Trigger: CTTGGCTTGGGCCCATGCCCAGCGCAGGCCTGAAGA...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTACAGACGGAGAGAAATaGTTTGCTTGCTGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: LSILRSGGRNMPVGRVDATDGEK*FACCPR
Trigger: TCTTGGACAGCAAGCAAACCATTTCTCTCCGTCTGT...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCCCTTGCCATCTGATTaGACAAAGAGAACTAGGACA +
Preference number: 2 (lower is better)
Translates to: KMGVIACTWPFPPACWLPPLPSD*TKRTRT
Trigger: TGTCCTAGTTCTCTTTGTCCAATCAGATGGCAAGGG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR TCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGTTTTTCTCTGCTTTCTaGGTGTGTTTATGGGGTATC +
Preference number: 2 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPFFSAF*VCLWGI
Trigger: GATACCCCATAAACACACTCAGAAAGCAGAGAAAAA...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTTGGCCACATGCTACCTaGCGTTGGCTTGTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: PVALWGIRASIREKVLAVWPHAT*RWLVPA
Trigger: GGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCA...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCATTCTGTGGTGGGTGGTaGTGGGTGGGCTGGTCTCAC +
Preference number: 2 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSFCGGW*WVGWSH
Trigger: GTGAGACCAGCCCACCCACCACCACCCACCACAGAA...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGTGGGCTGGTCTCACTaGCACCAACTGCCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQVGWSH*HQLPVL
Trigger: GAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCAC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACATGGCCACATGCTACCTaGCGTTGGCTTGTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTWPHAT*RWLVPA
Trigger: GGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCA...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CAA 90 bp GGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTTTTaGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCA +
Preference number: 2 (lower is better)
Translates to: GWMLGMEKWLAEASF*LRLLMAPSSRPKGS
Trigger: TGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR TCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCTTCCTTTTCTCCAGGTaGCTTCATAGCTTTAAATTG +
Preference number: 2 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPFLFSR*LHSFKL
Trigger: CAATTTAAAGCTATGAAGTCACCTGGAGAAAAGGAA...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR TCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTGAGCAGGAGTTTGGGTaGGATTGTGATGGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: PVALWGIRASIREKVLAVEQEFG*DCDGGG
Trigger: TCCTCCACCATCACAATCTCACCCAAACTCCTGCTC...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACAGTAGGTGGGGTAGGATaGAGAGTGTGGAGGGATGGC +
Preference number: 2 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTVGGVG*RVWRDG
Trigger: GCCATCCCTCCACACTCTGCATCCTACCCCACCTAC...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGGCTCCCTGTCCATCTTaGGGAGTGGCGGCAGAAACA +
Preference number: 2 (lower is better)
Translates to: YMSERDRRGELTNAITNRAPCPS*GVAAET
Trigger: TGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGC...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTGGTGGAAAAGTGTGTTaGGTAGGTGGGGTAGGATGC +
Preference number: 2 (lower is better)
Translates to: PVALWGIRASIREKVLAVGGKVC*VGGVGC
Trigger: GCATCCTACCCCACCTACCCAACACACTTTTCCACC...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTCCTGCAGGTACATACTaGTGCACATGTCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: PVALWGIRASIREKVLAVPAGTY*CTCPWP
Trigger: AGGCCATGGACATGTGCACCAGTATGTACCTGCAGG...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCGACACTGGGCAAGGGTaGCCACATGCTACCTGGCGT +
Preference number: 2 (lower is better)
Translates to: KVSTQEARTPKEGICKSVDTGQG*PHATWR
Trigger: ACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTC...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR TCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCGAACAACACGCTATTTaGAAAAACCTCGACAACGGG +
Preference number: 2 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLEQHAI*KNLDNG
Trigger: CCCGTTGTCGAGGTTTTTTCAAATAGCGTGTTGTTC...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR GCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCATCCACGCACTGCCCTTaGCATCTGATTGGACAAAGA +
Preference number: 2 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSSTHCP*HLIGQR
Trigger: TCTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGA...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTAAGATGGAAGAACCTTaGGGACACTGGAAGGTCATC +
Preference number: 2 (lower is better)
Translates to: PVALWGIRASIREKVLAVKMEEP*GHWKVI
Trigger: GATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTT...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGCCAAGGGCAGTGTCTaGGGCAGGCCCAGAAACACG +
Preference number: 2 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLAKGSV*GRPRNT
Trigger: CGTGTTTCTGGGCCTGCCCCAGACACTGCCCTTGGC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGGGTGGATGCTTGGCATaGAAAAGTGGCTTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: YMSERDRRGELTNAITNRGGCLA*KSGLQR
Trigger: CCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACC...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGCCTGTGAGCAGAGTGTaGACACACCCTGATAAGAAC +
Preference number: 2 (lower is better)
Translates to: YMSERDRRGELTNAITNRPVSRV*THPDKN
Trigger: GTTCTTATCAGGGTGTGTCCACACTCTGCTCACAGG...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR GCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGTTTCCCAGAGGTTTGTaGTTTTCTGTGGTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKFPRGL*FSVVGG
Trigger: ACCACCCACCACAGAAAAGCACAAACCTCTGGGAAA...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGTCCATCTTGCGGAGTaGCGGCAGAAACATGCCTGT +
Preference number: 2 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLVHLAE*RQKHAC
Trigger: ACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGAC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTAAGGGGCCGGGGCAATaGCAGCTTTCCTACAGAAAA +
Preference number: 2 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLKGPGQ*QLSYRK
Trigger: TTTTCTGTAGGAAAGCTGCCATTGCCCCGGCCCCTT...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 72 bp GGTGGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTaGTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCG +
Preference number: 3 (lower is better)
Translates to: GGWAGLTATNCQ*SSKARGPCWGP
Trigger: CGGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 72 bp GCACACGCGGAGGGACCGGGAAGCCGCATCAGCGTGTaGCCTCTTACCGGGCTGGTTCCTCTCGGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: AHAEGPGSRISV*PLTGLVPLGRV
Trigger: CACCCTCCCGAGAGGAACCAGCCCGGTAAGAGGGCACACGCTGATGCGGCTTCCCGGTCCCTCCGCGTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp TGTGCCCTCTTACCGGGCTGGTTCCTCTCGGGAGGGTaGTCTTCAGGCCTGCGCTGGGCATGGGCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: CALLPGWFLSGG*SSGLRWAWAQA
Trigger: GGCTTGGGCCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTAAGAGGGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp CCAGCCGGAAGGGAAGCTCTGGGCCGAGCTTGCTGGTaGAGGCTTGCTGGAGAGGGGACCCAGGAAACCCGC +
Preference number: 3 (lower is better)
Translates to: PAGREALGRACW*RLAGEGTQETR
Trigger: GCGGGTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp CCGCCTGCCTGCTGGCTCCCTGTCCATCTTGCGGAGTaGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGC +
Preference number: 3 (lower is better)
Translates to: PPACWLPVHLAE*RQKHACGPGGC
Trigger: GCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 72 bp GGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTaGTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAG +
Preference number: 3 (lower is better)
Translates to: GVIACTWPFPPA*WLPVHLAEWRQ
Trigger: CTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp GGAAGCTCTGGGCCGAGCTTGCTGGTGGAGGCTTGCTaGAGAGGGGACCCAGGAAACCCGCCTCAGGTGCTG +
Preference number: 3 (lower is better)
Translates to: GSSGPSLLVEAC*RGDPGNPPQVL
Trigger: CAGCACCTGAGGCGGGTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp CCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTaGGCCGAGCTTGCTGGTGGAGGCTTGCTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PRTVQSQPEGKL*AELAGGGLLER
Trigger: CCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 72 bp TTCTGTGGTGGGTGGTGGTGGGTGGGCTGGTCTCACTaGCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGG +
Preference number: 3 (lower is better)
Translates to: FCGGWWWVGWSH*HQLPVLLQGSG
Trigger: CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 72 bp GATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTaGCTGCTGGCTCCCTGTCCATCTTGCGGAGTGGCG +
Preference number: 3 (lower is better)
Translates to: DGGDCLYLALPA*LLAPCPSCGVA
Trigger: CGCCACTCCGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp GCCTGCAGGTACATACTGGTGCACATGTCCATGGCCTaGGCTGCAGCCGGGGGCAGCTTGGAGCACAGGGAC +
Preference number: 3 (lower is better)
Translates to: ACRYILVHMSMA*AAAGGSLEHRD
Trigger: GTCCCTGTGCTCCAAGCTGCCCCCGGCTGCAGCCCAGGCCATGGACATGTGCACCAGTATGTACCTGCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp GTGGCCACTTGCCAGGCCACAGACACTGGGCAAGGGTaGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCC +
Preference number: 3 (lower is better)
Translates to: VATCQATDTGQG*PHATWRWLVPA
Trigger: GGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCTGTGGCCTGGCAAGTGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp GACACAGGGCGTGGCCACTTGCCAGGCCACAGACACTaGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCT +
Preference number: 3 (lower is better)
Translates to: DTGRGHLPGHRH*ARVATCYLALA
Trigger: AGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTGTGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CAA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCACAGGGCGTGGCCACTaGCCAGGCCACAGACACTGG +
Preference number: 3 (lower is better)
Translates to: RACLQTAGCRHHARFRASTGRGH*PGHRHW
Trigger: CCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTGT...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CAA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCGGCCCCCGAGAGACGTaGTCTTTCCCAGAGGTTTGT +
Preference number: 3 (lower is better)
Translates to: EDGGDCLYLALPACLLAPGPRET*SFPEVC
Trigger: ACAAACCTCTGGGAAAGACAACGTCTCTCGGGGGCC...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 72 bp GCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATaGCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAG +
Preference number: 3 (lower is better)
Translates to: APCPSCGVAAET*LWAGWMLGMEK
Trigger: CTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CAA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCAGGTGGAAAAGTGTGTaGGGTAGGTGGGGTAGGATG +
Preference number: 3 (lower is better)
Translates to: PGLQGASRLSALESRGSTRWKSV*GRWGRM
Trigger: CATCCTACCCCACCTACCCAACACACTTTTCCACCT...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR TCA 72 bp ATGCTACCTGGCGTTGGCTTGTCCCTGCCAGCTGACTaGGGGATGGCTCTAAATAGCGGGCTGCCCGGTCTT +
Preference number: 3 (lower is better)
Translates to: MLPGVGLSLPAD*GMALNSGLPGL
Trigger: AAGACCGGGCAGCCCGCTATTTAGAGCCATCCCTCAGTCAGCTGGCAGGGACAAGCCAACGCCAGGTAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR TCA 72 bp TTACATATGTACACACGTCCCTTGAGTCGCTGCTGTTaGCACGGCCCTGTGTGGACGGGTCAGGCCCGAGGC +
Preference number: 3 (lower is better)
Translates to: LHMYTRPLSRCC*HGPVWTGQARG
Trigger: GCCTCGGGCCTGACCCGTCCACACAGGGCCGTGTCAACAGCAGCGACTCAAGGGACGTGTGTACATATGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 72 bp TGGCCCCCGAGAGACGTTGTCTTTCCCAGAGGTTTGTaGTTTTCTGTGGTGGGTGGTGGTGGGTGGGCTGGT +
Preference number: 3 (lower is better)
Translates to: WPPRDVVFPRGL*FSVVGGGGWAG
Trigger: ACCAGCCCACCCACCACCACCCACCACAGAAAAGCACAAACCTCTGGGAAAGACAACGTCTCTCGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 72 bp GTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTaGACCTGTCACAACCTGGGGCTTGCTCCCGCCCCG +
Preference number: 3 (lower is better)
Translates to: VQDHLCLWALST*TCHNLGLAPAP
Trigger: CGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp AAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTaGAATCGGCACACGCGGAGGGACCGGGAAGCCGCA +
Preference number: 3 (lower is better)
Translates to: KMEEPWGHWKVI*NRHTRRDREAA
Trigger: TGCGGCTTCCCGGTCCCTCCGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp TCCCAGAGGTTTGTGCTTTTCTGTGGTGGGTGGTGGTaGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTG +
Preference number: 3 (lower is better)
Translates to: SQRFVLFCGGWW*VGWSHCHQLPV
Trigger: CACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGAAAAGCACAAACCTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp AGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATaGGACCCCAGTGACGGGACAACCTGGCATCACCCT +
Preference number: 3 (lower is better)
Translates to: RQQPGRAQRIYR*DPSDGTTWHHP
Trigger: AGGGTGATGCCAGGTTGTCCCGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp GGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTaGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTA +
Preference number: 3 (lower is better)
Translates to: GPRPVGSRPVAL*GIRASIREKVL
Trigger: TAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp TTTGTGCTTTTCTGTGGTGGGTGGTGGTGGGTGGGCTaGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: FVLFCGGWWWVG*SHCHQLPVLLQ
Trigger: TTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCACCCACCACAGAAAAGCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp TGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTaGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTT +
Preference number: 3 (lower is better)
Translates to: CPSCGVAAETCL*AGWMLGMEKWL
Trigger: AAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp CCCCGGCCTTTCCACGCACTGCCCTTGCCATCTGATTaGACAAAGAGAACTAGGACAGAGGGAAGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: PRPFHALPLPSD*TKRTRTEGSGC
Trigger: ACACCCACTTCCCTCTGTCCTAGTTCTCTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGAAAGGCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp GGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATaGTCTGACACAGGGCGTGGCCACTTGCCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: GICKSVWSLIPR*SDTGRGHLPGH
Trigger: GTGGCCTGGCAAGTGGCCACGCCCTGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CAA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGAGAGAAATGGTTTGCTaGCTGTCCAAGAGCAACGTT +
Preference number: 3 (lower is better)
Translates to: RHWARVATCYLALACPCQREMVC*LSKSNV
Trigger: AACGTTGCTCTTGGACAGCAAGCAAACCATTTCTCT...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CAA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTGGTGATTGCCTGTACTaGGCCCTTCCCGCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PVALWGIRASIREKVLAVGDCLY*ALPACL
Trigger: CAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACC...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR TCA 72 bp TCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTaGGCAGAGTGTGGACACACCCTGATAAGAACCAGA +
Preference number: 3 (lower is better)
Translates to: STLRTGKPWIHL*AECGHTLIRTR
Trigger: TCTGGTTCTTATCAGGGTGTGTCCACACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTaGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTT +
Preference number: 3 (lower is better)
Translates to: CLWAGWMLGMEK*LAEASFLLRLL
Trigger: AAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR GCA 72 bp ATGGATAAAGCTTCAAACCAAGAAGATGGGGGTGATTaGCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCT +
Preference number: 3 (lower is better)
Translates to: MDKASNQEDGGD*LYLALPACLLA
Trigger: AGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTCTTGGTTTGAAGCTTTATCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp AAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATaGGCGTTGTCTACCTGCACCTGTCACAACCTGGGG +
Preference number: 3 (lower is better)
Translates to: KDLSRVQDHLCL*ALSTCTCHNLG
Trigger: CCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CAA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCGTCTTTCCCAGAGGTTaGTGCTTTTCTGTGGTGGGT +
Preference number: 3 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTVFPRG*CFSVVG
Trigger: ACCCACCACAGAAAAGCACAAACCTCTGGGAAAGAC...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR TCA 72 bp GCATGGAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTaGGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAG +
Preference number: 3 (lower is better)
Translates to: AWKSGLQRPRFC*GYLWLQVVVRK
Trigger: CTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR TCA 72 bp TCTCTATTTCTCATTTACATATGTACACACGTCCCTTaGGTCGCTGCTGTTGACACGGCCCTGTGTGGACGG +
Preference number: 3 (lower is better)
Translates to: SLFLIYICTHVP*VAAVDTALCGR
Trigger: CCGTCCACACAGGGCCGTGTCAACAGCAGCGACTCAAGGGACGTGTGTACATATGTAAATGAGAAATAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CAA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTAGTTGCCGCTCCTGTTaGCTTCTGACAGGTTATATG +
Preference number: 3 (lower is better)
Translates to: PVALWGIRASIREKVLAVSCRSC*LLTGYM
Trigger: CATATAACCTGTCAGAAGCAAACAGGAGCGGCAACT...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CAA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCTTCCACGCACTGCCCTaGCCATCTGATTGGACAAAG +
Preference number: 3 (lower is better)
Translates to: KVSTQEARTPKEGICKSVFHALP*PSDWTK
Trigger: CTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGAA...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CAA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTAAGAAGACTCGGTCTTaGTCATTGAGTCCAGGTATT +
Preference number: 3 (lower is better)
Translates to: PVALWGIRASIREKVLAVKKTRS*SLSPGI
Trigger: AATACCTGGACTCAATGACAAAGACCGAGTCTTCTT...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CCA 72 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTaGGGCAAAGTATCAACGCAAGAAGCAAGAACTCCT +
Preference number: 3 (lower is better)
Translates to: TLIRTRMNPRPF*GKVSTQEARTP
Trigger: AGGAGTTCTTGCTTCTTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR TCA 72 bp AAAACCCCTTTCCACTCAGGGTCAGAGTATATTACATaGGCGAGAGAGACAGACGTGGAGAACTCACAAATG +
Preference number: 3 (lower is better)
Translates to: KTPFHSGSEYIT*ARETDVENSQM
Trigger: CATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTAATATACTCTGACCCTGAGTGGAAAGGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR-3UTR CAA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTACTCGGTCTTTGTCATaGAGTCCAGGTATTTTAAAA +
Preference number: 3 (lower is better)
Translates to: PVALWGIRASIREKVLAVTRSLS*SPGILK
Trigger: TTTTAAAATACCTGGACTCAATGACAAAGACCGAGT...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR-3UTR CAA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTCTCTGTTTATGGGCGTaGTCTACCTGCACCTGTCAC +
Preference number: 3 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLLCLWA*STCTCH
Trigger: GTGACAGGTGCAGGTAGACAACGCCCATAAACAGAG...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR GCA 72 bp CATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATaGTATAACCAACAGGATCTAGTTTTTCCACGTGAT +
Preference number: 3 (lower is better)
Translates to: HERERQTWRTHK*YNQQDLVFPRD
Trigger: ATCACGTGGAAAAACTAGATCCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CCA 72 bp GGTCAGAGTATATTACATGAGCGAGAGAGACAGACGTaGAGAACTCACAAATGCTATAACCAACAGGATCTA +
Preference number: 3 (lower is better)
Translates to: GQSILHERERQT*RTHKCYNQQDL
Trigger: TAGATCCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTAATATACTCTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCGCTCGGGGCCCATGCTaGGGCCCGGGGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPARGPC*GPGAFS
Trigger: TGAGAAGGCCCCCGGGCCCCAGCATGGGCCCCGAGC...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCCAGGGCGTGGCCACTTaGCAGGCCACAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPQGVAT*QATDTG
Trigger: CCCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTG...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCTCACAACCTGGGGCTTaGTCCCGCCCCGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPSQPGA*SRPGCL
Trigger: GAGGCATCCGGGGCGGGAGCAAGCCCCAGGTTGTGA...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCTGTGTGGATGGCTGCTaGGAGCGGCCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPCVDGC*ERPVAA
Trigger: AGCCGCCACAGGCCGCTCCCAGCAGCCATCCACACA...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGCCCACAGAGGAGAGCTaGGGACCACCCACAGCGGAC +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQPTEES*GPPTAD
Trigger: GTCCGCTGTGGGTGGTCCCCAGCTCTCCTCTGTGGG...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTCTGCCGCGGGCTGAGTaGAGTCAGCAGGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHALPRAE*SQQAAW
Trigger: CCAGGCCGCCTGCTGACTTCACTCAGCCCGCGGCAG...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGGCGTTCACGCTGACCTaGACCGAGGCGGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: YRAGSSREGGLQACAGHGAFTLT*TEAGQL
Trigger: CAACTGGCCCGCCTCGGTGCAGGTCAGCGTGAACGC...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATGCTGGGGGACAGGTATaGAGGGATGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDAGGQV*RDAAPR
Trigger: CCTGGGAGCAGCATCCCTCCATACCTGTCCCCCAGC...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCGCAGCTCGTCATTGTaGTTGGCTGGGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDRSSSL*LAGGGG
Trigger: GCCACCACCCCCAGCCAACCACAATGACGAGCTGCG...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGCTCCACATCAGCGTCTaGTGGACCGTGGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: YRAGSSREGGLQACAGHGLHISV*WTVGRR
Trigger: CCTGCGGCCCACGGTCCACCAGACGCTGATGTGGAG...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGTTCCCGCCTGCCTGCTaGCTCCCTGTCCATCTTGCG +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQFPPAC*LPVHLA
Trigger: CGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAA...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCCCTGCATGGGGTGGCTaGGGGGTTTCTCGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: PGLQGASRLSALESRGSTPAWGG*GVSRGR
Trigger: CCGCCCTCGAGAAACCCCTCAGCCACCCCATGCAGG...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCCCCTGCGCTCCGGCCTaGCCCTCTAAGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPPCAPA*PSKAEE
Trigger: CTCCTCAGCCTTAGAGGGTCAGGCCGGAGCGCAGGG...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TGGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCTACCCCTCTGTTCTaGGAGGGCTGCAGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: WVGWSHCHQLPVLLQGSGPTPLF*EGCSGG
Trigger: TCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGG...CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGCAGATGGGACCCCAGTaGCGGGACAACCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQQMGPQ*RDNLAS
Trigger: TGATGCCAGGTTGTCCCGTCACTGGGGTCCCATCTG...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATTCCAGGTCAAAGCCTTaGTGGGCTGCCACCCGACTG +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDSRSKP*WAATRL
Trigger: CAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGA...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGGTGTGCGGAGGGATaGCCATGCCTGCGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: PGLQGASRLSALESRGSTWCAEG*PCLRGR
Trigger: ACGCCCCCGCAGGCATGGGCATCCCTCCGCACACCA...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGGGCTGTAGCTGTGGCTaGTGCTGCTGCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: CTGAPSLPLCSERAAAGEGCSCG*CCCHCR
Trigger: GCGGCAGTGGCAGCAGCAGCAGCCACAGCTACAGCC...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATAGCCGCATCAGCGTGTaGCCTCTTACCGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDSRISV*PLTGLV
Trigger: AACCAGCCCGGTAAGAGGGCACACGCTGATGCGGCT...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCGCCCGGGGCCTGGGCTaGAGGGAGCATCTCGACTCT +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPARGLG*REHLDS
Trigger: AGAGTCGAGATGCTCCCTGCAGCCCAGGCCCCGGGC...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCGATGGTTGCAGGAGGTaGCCGGGGCCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGLQGASRLSALESRGSTDGCRR*PGPGLQ
Trigger: CTGCAGCCCAGGCCCCGGGCACCTCCTGCAACCATC...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGCCCTTCCCGCCTGCCTaGTGGCTCCCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: YRAGSSREGGLQACAGHGPFPPA*WLPVHL
Trigger: AAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGG...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGTTGGCCCTTCCCGCCTaGCTGCTGGCTCCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CTGAPSLPLCSERAAAGELALPA*LLAPCP
Trigger: TGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAA...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCCCGGGCGGCCGGGGCTaGTTCATGCCCATGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPPGGRG*FMPMGG
Trigger: CCCTCCCATGGGCATGAACCAGCCCCGGCCGCCCGG...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCCCTCGAGCAGGCAGCTaGATGCGCCGGAATGTGATG +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPPRAGS*MRRNVM
Trigger: CATCACATTCCGGCGCATCCAGCTGCCTGCTCGAGG...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGGGCTGCTGTAGTCGTTaGAGTTGGTGCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YRAGSSREGGLQACAGHGGCCSR*SWCPLG
Trigger: CCCCAGGGGGCACCAACTCCAACGACTACAGCAGCC...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTCAGAGTGTGGAGGGATaGCCCCGACCGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAQSVEG*PRPGGP
Trigger: AGGGCCACCCGGTCGGGGCCATCCCTCCACACTCTG...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGCAAACCGATGACCCCTaGCCCCCGAGAGACGTTGTC +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQQTDDP*PPRDVV
Trigger: GACAACGTCTCTCGGGGGCCAGGGGTCATCGGTTTG...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGACACATGTCCATGGCCTaGGCTGCAGCCGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGHMSMA*AAAGGS
Trigger: GCTGCCCCCGGCTGCAGCCCAGGCCATGGACATGTG...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGGTGTGCCAAAGGGGCTaGTGCCGGGCGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVVCQRG*CRAAGA
Trigger: AGCCCCGGCCGCCCGGCATCAGCCCCTTTGGCACAC...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGCGCCGCGCTCAATGGTaGGGGGCGTGGCGTTCACGC +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTRRAQW*GAWRSR
Trigger: GCGTGAACGCCACGCCCCTCACCATTGAGCGCGGCG...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGTGCCGTCTGGGACAGTaGCTGGAAGTCAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQCRLGQ*LEVNSW
Trigger: CCAGCTGTTGACTTCCAGTCACTGTCCCAGACGGCA...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTCGCCGGTCAGCAGCTTaGGGCCCCTCCACCTCACTC +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPRRSAA*GPSTSL
Trigger: GAGTGAGGTGGAGGGGCCGCAAGCTGCTGACCGGCG...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATGTAGGTGGGGTAGGATaGAGAGTGTGGAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDVGGVG*RVWRDG
Trigger: GCCATCCCTCCACACTCTGCATCCTACCCCACCTAC...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGCCCGGGGCCTGGGCTaGAGGGAGCATCTCGACTCT +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPARGLG*REHLDS
Trigger: AGAGTCGAGATGCTCCCTGCAGCCCAGGCCCCGGGC...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGATGGTTGCAGGAGGTaGCCGGGGCCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPDGCRR*PGPGLQ
Trigger: CTGCAGCCCAGGCCCCGGGCACCTCCTGCAACCATC...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGAGCCCAGAGATGGTTaGAGGAGGTGCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPEPRDG*RRCPGP
Trigger: AGGCCCCGGGCACCTCCTGCAACCATCTCTGGGCTC...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATGCTCCCTGTCCATCTTaGGGAGTGGCGGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDAPCPS*GVAAET
Trigger: TGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGC...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGCTCGAAGGGCCGCTaGAAGGCCCGTGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDACSKGR*KARGSP
Trigger: CGGAGACCCACGGGCCTTCCAGCGGCCCTTCGAGCA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGCCAAGGGTGTGGAGGTaGGACGTGGGCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALPRVWR*DVGSRP
Trigger: GGGTCTGGAGCCCACGTCCCACCTCCACACCCTTGG...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGCCCAAGCCAAGGGTGTaGAGGTGGGACGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPPKPRV*RWDVGS
Trigger: GGAGCCCACGTCCCACCTCCACACCCTTGGCTTGGG...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCGTCTGGGACAGTGACTaGAAGTCAACAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPVWDSD*KSTAGA
Trigger: GGCCCCAGCTGTTGACTTCCAGTCACTGTCCCAGAC...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGCCGAGCTTGCTGGTaGAGGCTTGCTGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPGRACW*RLAGEG
Trigger: CCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCC...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGGCACCTGTCACAACCTaGGGCTTGCTCCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RHWARVATCYLALACPCQAPVTT*GLLPPR
Trigger: CCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGC...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGGTGATTGCCTGTACTTaGCCCTTCCCGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: YRAGSSREGGLQACAGHGVIACT*PFPPAC
Trigger: GCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCAC...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGGAGCTCATGGAGCTaGGAGGGGGCTGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPWSSWS*EGAAWG
Trigger: TCCCCATGCAGCCCCCTCTCAGCTCCATGAGCTCCA...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGCTTGTCCCTGCCAGCTaGCTGAGGGATGGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQLVPAS*LRDGSK
Trigger: TTTAGAGCCATCCCTCAGTCAGCTGGCAGGGACAAG...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATTCCTGCTCAGGCCTCTaGAGAAGGACCAGGACTCAA +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDSCSGL*RRTRTQ
Trigger: TTGAGTCCTGGTCCTTCTGCAGAGGCCTGAGCAGGA...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGCAGCCCATCAGGCTCTaGTCGAAGGGCCGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPQPIRL*SKGRWK
Trigger: CTTCCAGCGGCCCTTCGAGCAGAGCCTGATGGGCTG...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TGGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGAAAGCCTTGCTGGGCTaGCACCCGACTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: WVGWSHCHQLPVLLQGSGKALLG*HPTDHR
Trigger: ACGGTGGTCAGTCGGGTGGCAGCCCAGCAAGGCTTT...CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGTCGCGGGGTTCATGCTaGCCCCCATGGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTSRGSC*PPWRQA
Trigger: GGCCTGCCTCCATGGGGGGCAGCATGAACCCCGCGA...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCCCGGCTGGCACACGTaGTTCAGGTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPPGWHT*FRCRGL
Trigger: CAAGCCCCTGCACCTGAAGCACGTGTGCCAGCCGGG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGACCTTGATGGCCGTCTaGTCCACCCCATCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALTLMAV*STPSSP
Trigger: CGGGGAGGATGGGGTGGAGCAGACGGCCATCAAGGT...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGGTGGGCTGGTCTCACTaGCACCAACTGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: CTGAPSLPLCSERAAAGEVGWSH*HQLPVL
Trigger: GAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCAC...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGCGCCCCGGATGCCTCTaGACCTCCCTCACACCCTGG +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTRPGCL*TSLTPW
Trigger: CCAGGGTGTGAGGGAGGTGCAGAGGCATCCGGGGCG...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTCACAACCTGGGGCTTaGTCCCGCCCCGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDASQPGA*SRPGCL
Trigger: GAGGCATCCGGGGCGGGAGCAAGCCCCAGGTTGTGA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGAGGGAGCCGGGAGGCTaGTTGGTGTTCTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: CTGAPSLPLCSERAAAGEREPGG*LVFCCQ
Trigger: TTGGCAGCAGAACACCAACCAGCCTCCCGGCTCCCT...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTAGTCAGCAGGCGGCCTaGTGTGCGGAGGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPSQQAA*CAEGCP
Trigger: TGGGCATCCCTCCGCACACCAGGCCGCCTGCTGACT...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGGCTGGGTACTGGCCTaGCTGGGTGGGGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPGWVLA*LGGELA
Trigger: AGCCAGTTCCCCACCCAGCCAGGCCAGTACCCAGCC...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCGGAGCTCGGCTGGCTaGGCATCCTCTGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPRSSAG*ASSVLG
Trigger: ACCCAGGACAGAGGATGCCCAGCCAGCCGAGCTCCG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGGGCCTGCGCTGGGCATaGGCCCAAGCCAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTGLRWA*AQAKGV
Trigger: CACACCCTTGGCTTGGGCCCATGCCCAGCGCAGGCC...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGGTGCACATGTCCATaGCCTGGGCTGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAWCTCP*PGLQPG
Trigger: CCCCGGCTGCAGCCCAGGCCATGGACATGTGCACCA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGTTCCCGCCTGCCTGCTaGCTCCCTGTCCATCTTGCG +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALFPPAC*LPVHLA
Trigger: CGCAAGATGGACAGGGAGCCAGCAGGCAGGCGGGAA...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGCGGCAGACTTCGGGGTaGACTTGTCTCGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CTGAPSLPLCSERAAAGERQTSG*TCLGLQ
Trigger: CTGCAAACCGAGACAAGTTCACCCCGAAGTCTGCCG...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGGAGCTCATGGAGCTaGGAGGGGGCTGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAWSSWS*EGAAWG
Trigger: TCCCCATGCAGCCCCCTCTCAGCTCCATGAGCTCCA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TGGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGGCCTGGGAGGCCTGTTaGCATTCCCTTGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: WVGWSHCHQLPVLLQGSGAWEAC*HSLGCS
Trigger: ACTACAGCCAAGGGAATGTCAACAGGCCTCCCAGGC...CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGGCGGGAAGGGTGGTTTaGCGTCTTGGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RHWARVATCYLALACPCQAGRVV*RLGWGT
Trigger: TGTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGC...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGTGTAAGTCCGACTTaGTGGGCACCGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDACVSPT*WAPAAS
Trigger: GCTGGCGGCCGGTGCCCATCAAGTCGGACTTACACA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGTTGAGTCGCTGCTGTTaGCACGGCCCTGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPLSRCC*HGPVWT
Trigger: CGTCCACACAGGGCCGTGTCAACAGCAGCGACTCAA...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGTGGGCCGGCCATACATaGTCTGCTGGATGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: WVGWSHCHQLPVLLQGSGWAGHT*SAGCRA
Trigger: AGCCCTACATCCAGCAGAGCATGTATGGCCGGCCCA...CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCCCTTCCCGCCTGCCTaGTGGCTCCCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPPFPPA*WLPVHL
Trigger: AAGATGGACAGGGAGCCAGCAGGCAGGCGGGAAGGG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGTCTGCTGAGAGCGTCTaGAGGAGGAGGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RHWARVATCYLALACPCQSAESV*RRRWQP
Trigger: GGGCTGCCACCTCCTCCTCCAGACGCTCTCAGCAGA...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCACCCCTTGCAGCATTaGTCCGACGCCAACGGGCCT +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPHPLQH*SDANGP
Trigger: AGGCCCGTTGGCGTCGGACCAATGCTGCAAGGGGTG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGAAGCCGGGAGGCTGGTTaGTGTTCTGCTGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGSREAG*CSAAKG
Trigger: TCCCTTGGCAGCAGAACACCAACCAGCCTCCCGGCT...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGGGGTTCCCAAGGACCTaGCTCTGGGATGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: YRAGSSREGGLQACAGHGGFPRT*LWDVLV
Trigger: AACCAACACATCCCAGAGCCAGGTCCTTGGGAACCC...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGCTGCCCCGCAAACTGTaGGGAGTTGAGGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALLPRKL*GVEAWV
Trigger: AACCCAGGCCTCAACTCCCCACAGTTTGCGGGGCAG...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGAGCGGGGCCAGCCTTaGCTGAGAACTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPERGQP*LRTAAA
Trigger: AGCAGCAGCAGTTCTCAGCCAAGGCTGGCCCCGCTC...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGTGCCCGGAGCTCGGCTaGCTGGGCATCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTCPELG*LGILCP
Trigger: AGGACAGAGGATGCCCAGCCAGCCGAGCTCCGGGCA...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGCAGCACGAAGAGGTaGGAGCAGCAGCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDACSTKR*EQQQAV
Trigger: CACGGCCTGCTGCTGCTCCCACCTCTTCGTGCTGCA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTATGGAGGGGTGGGGCTaGTCAGAGCTGCCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPMEGWG*SELPAC
Trigger: ACACGCTGGCAGCTCTGACCAGCCCCACCCCTCCAT...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCGGTGGAAAAGTGTGTTaGGTAGGTGGGGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPGGKVC*VGGVGC
Trigger: GCATCCTACCCCACCTACCCAACACACTTTTCCACC...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGCCAAGGGCAGTGTCTaGGGCAGGCCCAGAAACACG +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPAKGSV*GRPRNT
Trigger: CGTGTTTCTGGGCCTGCCCCAGACACTGCCCTTGGC...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCCAGGCCACAGACACTaGGCAAGGGTGGCCACATGC +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPPGHRH*ARVATC
Trigger: GCATGTGGCCACCCTTGCCCAGTGTCTGTGGCCTGG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTCTGGGCCGAGCTTGCTaGTGGAGGCTTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDALGRAC*WRLAGE
Trigger: CTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAG...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTCCGGAAGGGAAGCTCTaGGCCGAGCTTGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAPEGKL*AELAGG
Trigger: TCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGG...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCGTGATTGCCTGTACTTaGCCCTTCCCGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPVIACT*PFPPAC
Trigger: GCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCAC...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGACGGCAGACTTCGGGGTaGACTTGTCTCGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGRQTSG*TCLGLQ
Trigger: CTGCAAACCGAGACAAGTTCACCCCGAAGTCTGCCG...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTCAAACTGTGGGGAGTTaGGGCCTGGGTTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAQTVGS*GLGCWW
Trigger: CCACCAGCAACCCAGGCCTCAACTCCCCACAGTTTG...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTAAATCAGAACACAGCTaGCGTGAGTCCGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAKSEHS*RESGRC
Trigger: GCAGCGCCCGGACTCACGGCAGCTGTGTTCTGATTT...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGTCTCCTCACACCCCTTaGAGCATTGGTCCGACGCCA +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPSPHTP*SIGPTP
Trigger: TGGCGTCGGACCAATGCTGCAAGGGGTGTGAGGAGA...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGCCTTGGCTGAGAACTaGTGCTGCTGCCCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPALAEN*CCCPAN
Trigger: GTTTGCGGGGCAGCAGCAGCAGTTCTCAGCCAAGGC...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCACACAGCCTTCCTGGTaGACTGGTGCACCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PGLQGASRLSALESRGSTTQPSW*TGAPSL
Trigger: TAGGGAGGGTGCACCAGTGCACCAGGAAGGCTGTGT...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCGCAAGGGTGGCCACATaGTACCTGGCGTTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PGLQGASRLSALESRGSTARVAT*YLALAC
Trigger: ACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGC...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGCAGGGCGTGGCCACTTaGCAGGCCACAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVQGVAT*QATDTG
Trigger: CCCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTG...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTTGGGCGTTGTCTACCTaGACCTGTCACAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAWALST*TCHNLG
Trigger: CCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCA...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCGTGGCGGCAGAAACATaGCTGTGGGCCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: RACLQTAGCRHHARFRASVAAET*LWAGWM
Trigger: CATCCACCCGGCCCACAGGCATGTTTCTGCCGCCAC...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCGGCCTGGGTTGCTGGTaGTCATGCCCGACGCCATGG +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPAGLGCW*SCPTPW
Trigger: CCATGGCGTCGGGCATGACCACCAGCAACCCAGGCC...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCCGCTGCCGGGGTAGTTaGGCCGGCCATACATGCTCT +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPRCRGS*AGHTCS
Trigger: AGAGCATGTATGGCCGGCCCAACTACCCCGGCAGCG...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGGCGTCTGGTGGACCGTaGGCCGCAGGTGGAACACAT +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTASGGP*AAGGTH
Trigger: ATGTGTTCCACCTGCGGCCCACGGTCCACCAGACGC...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGCCCTGACTGGCTGCTaGGGTGTGGTACGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPALTGC*GVVRAN
Trigger: GTTTGCACGTACCACACCCCAGCAGCCAGTCAGGGC...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGAATGGAGGCCCTGACTaGCTGCTGGGGTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASNGGPD*LLGCGT
Trigger: CGTACCACACCCCAGCAGCCAGTCAGGGCCTCCATT...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTGGTGGTGGGTGGGCTaGTCTCACTGCCACCAACTG +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAWWWVG*SHCHQL
Trigger: CAGTTGGTGGCAGTGAGACCAGCCCACCCACCACCA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGACACTGGGCAAGGGTaGCCACATGCTACCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPDTGQG*PHATWR
Trigger: ACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTC...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTCTGGTGGAGGCTTGCTaGAGAGGGGACCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDALVEAC*RGDPGN
Trigger: GTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAG...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTGCAGAAACATGCCTGTaGGCCGGGTGGATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAAETCL*AGWMLG
Trigger: GCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGC...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGGCAGAAACATGCCTGTaGGCCGGGTGGATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RHWARVATCYLALACPCQAETCL*AGWMLG
Trigger: GCCAAGCATCCACCCGGCCCACAGGCATGTTTCTGC...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CAA 72 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTaGGCTTGTCCCTGCCAGCTGACTGAGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: RHWARVATCYLA*ACPCQLTEGWL
Trigger: GAGCCATCCCTCAGTCAGCTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGGGCCTCTTTATGTTCTaGATAGGAAGGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: CTGAPSLPLCSERAAAGEGLFMF*IGRDWG
Trigger: GCCCCAGTCCCTTCCTATTCAGAACATAAAGAGGCC...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGCTCCTGTTTGCTTCTaGCAGGTTATATGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALAPVCF*QVICPR
Trigger: GCGCGGGCATATAACCTGTCAGAAGCAAACAGGAGC...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp GGACGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATAGGCCTCGTTTTTGCTaGGGTTACTTATGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GRVRPEARREQTCSSLGDRPRFC*GYLWLQ
Trigger: TTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCT...ATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCCCAAGAAGATGGGGGTaGTTGCCTGTACTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPPRRWG*LPVLGP
Trigger: AGGGCCAAGTACAGGCAATCACCCCCATCTTCTTGG...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGAAAGCCTTGCTGGGCTaGCACCCGACTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTKALLG*HPTDHR
Trigger: ACGGTGGTCAGTCGGGTGGCAGCCCAGCAAGGCTTT...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGTCCAGGTCAAAGCCTTaGTGGGCTGCCACCCGACTG +
Preference number: 4 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTSRSKP*WAATRL
Trigger: CAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGA...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCTGTCTCCTGCAGGGCTaGCACAGTGGCCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPACLLQG*HSGRGC
Trigger: ACAGCCACGGCCACTGTGGCAGCCCTGCAGGAGACA...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGATTTTCGTGATACAGTaGTCTGCGGGCAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALIFVIQ*SAGRRR
Trigger: GCGCCTCCTGCCCGCAGAGCACTGTATCACGAAAAT...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTTGTGGCATAGTTTCCTaGATGGGGTGGCTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHACGIVS*MGWLRG
Trigger: ACCCCTCAGCCACCCCATGCAGGAAACTATGCCACA...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTGTGGGCCGGGTGGATaGTTGGCATGGAAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASCGPGG*LAWKSG
Trigger: GCCACTTTTCCATGCCAAGCATCCACCCGGCCCACA...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGGCTCCCTGTCCATCTTaGGGAGTGGCGGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASAPCPS*GVAAET
Trigger: TGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGC...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGGTCAAAGCCTTGCTaGGCTGCCACCCGACTGACC +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSRSKPC*AATRLT
Trigger: GGTCAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCT...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGGTAGGATGCAGAGTGTaGAGGGATGGCCCCGACCGG +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVVGCRV*RDGPDR
Trigger: CCGGTCGGGGCCATCCCTCCACACTCTGCATCCTAC...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCGCACAGGCTCCCAGGTaGAAAAGTGTGTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PGLQGASRLSALESRGSTAQAPR*KSVLGR
Trigger: CCTACCCAACACACTTTTCCACCTGGGAGCCTGTGC...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCGCCTTCCTGGTGCACTaGTGCACCCTCCCTACCCCT +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPAAFLVH*CTLPTP
Trigger: AGGGGTAGGGAGGGTGCACCAGTGCACCAGGAAGGC...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCTCTTCAGGCCTGCGCTaGGCATGGGCCCAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPASSGLR*AWAQAK
Trigger: CTTGGCTTGGGCCCATGCCCAGCGCAGGCCTGAAGA...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGACAGACACCATTGCCCTaGGCTCTGGTTTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGQTPLP*ALVSAP
Trigger: AGGTGCAGAAACCAGAGCCCAGGGCAATGGTGTCTG...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTAGTGACGGGACAACCTaGCATCACCCTAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHASDGTT*HHPRPC
Trigger: ACATGGCCTAGGGTGATGCCAGGTTGTCCCGTCACT...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGAAGTGACGGGACAACCTaGCATCACCCTAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGSDGTT*HHPRPC
Trigger: ACATGGCCTAGGGTGATGCCAGGTTGTCCCGTCACT...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCTGGCCACATGCTACCTaGCGTTGGCTTGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPWPHAT*RWLVPA
Trigger: GGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCA...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGTGGCCACATGCTACCTaGCGTTGGCTTGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTWPHAT*RWLVPA
Trigger: GGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCA...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCGACACTGGGCAAGGGTaGCCACATGCTACCTGGCGT +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSDTGQG*PHATWR
Trigger: ACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTC...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCCTGGTGGAGGCTTGCTaGAGAGGGGACCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPLVEAC*RGDPGN
Trigger: GTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAG...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGTTCAGGCTGCACTGGTaGGTGTGTTTATGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQFRLHW*VCLCVY
Trigger: GTACACACATAAACACACCCACCAGTGCAGCCTGAA...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
3UTR CAA 72 bp CCCTGGCCCCCGAGAGACGTTGTCTTTCCCAGAGGTTaGTGCTTTTCTGTGGTGGGTGGTGGTGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PWPPRDVVFPRG*CFSVVGGGGWA
Trigger: AGCCCACCCACCACCACCCACCACAGAAAAGCACAAACCTCTGGGAAAGACAACGTCTCTCGGGGGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGTTGTCCAGCCTCAGTaGTCTGCAAACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAVVQPQ*SANHQC
Trigger: ACACTGGTGGTTTGCAGATCACTGAGGCTGGACAAC...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCTGCCGTCTGGGACAGTaGCTGGAAGTCAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RACLQTAGCRHHARFRASCRLGQ*LEVNSW
Trigger: CCAGCTGTTGACTTCCAGTCACTGTCCCAGACGGCA...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGCCAGCCTCAGTGATCTaGAAACCACCAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALPASVI*KPPVFH
Trigger: GTGGAACACTGGTGGTTTGCAGATCACTGAGGCTGG...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGTGCTGCTTGATGCACTaGAGTCGGTCATTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPCCLMH*SRSLVC
Trigger: GCAGACCAATGACCGACTGCAGTGCATCAAGCAGCA...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGAACTTGTCTCGGTTTaGAGCACACACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAELVSV*STHSQQ
Trigger: CTGCTGGCTGTGTGTGCTGCAAACCGAGACAAGTTC...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGGGCTGGTTGGTGTTCTaGTGCCAAGGGACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RHWARVATCYLALACPCQGWLVF*CQGTES
Trigger: TGACTCTGTCCCTTGGCAGCAGAACACCAACCAGCC...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCGAGAACTGCTGCTGCTaGCCCGCAAACTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPAENCCC*PANCGE
Trigger: CTCCCCACAGTTTGCGGGGCAGCAGCAGCAGTTCTC...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCTTGTTCTGTGTCTCCTaGAGGGCTGCCACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSLFCVS*RAATVA
Trigger: GGCCACTGTGGCAGCCCTGCAGGAGACACAGAACAA...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCAACAGGTATGGAGGGATaGTGCTCCCAGGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: PEHSGRACLQTAGCRHHATGMEG*CSQGSW
Trigger: CCATGACCCCTGGGAGCAGCATCCCTCCATACCTGT...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCGCGTTGGCTTGTCCCTaGCAGCTGACTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPAALACP*QLTEGW
Trigger: CCATCCCTCAGTCAGCTGGCAGGGACAAGCCAACGC...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCGCAAGGGTGGCCACATaGTACCTGGCGTTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSARVAT*YLALAC
Trigger: ACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGC...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGTGCTCCCGCCCCGGATaGCTCTGCACCTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHACSRPG*LCTSLT
Trigger: TGTGAGGGAGGTGCAGAGGCATCCGGGGCGGGAGCA...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGTGTGGGCCGGGTGGATaGTTGGCATGGAAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTCGPGG*LAWKSG
Trigger: GCCACTTTTCCATGCCAAGCATCCACCCGGCCCACA...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTGAAGATGGGGGTGATTaGCTGTACTTGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPEDGGD*LYLALP
Trigger: GGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGAACTGCAGTCGGTCATTaGTCTGCTGGATGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGTAVGH*SAGCAC
Trigger: ACAGGCACATCCAGCAGACCAATGACCGACTGCAGT...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTGCCGCCTGGATTCATaGGGTTGTTGGCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASCRLDS*GCWHWP
Trigger: TGGCCAATGCCAACAACCCCATGAATCCAGGCGGCA...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCTGGCTGTTATACGCCTaGGTGGGACCCATCGGTCCA +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPWLLYA*VGPIGP
Trigger: TGGACCGATGGGTCCCACCCAGGCGTATAACAGCCA...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCAGAGCGCTCATATTTaGCTTGATGTCAGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: WVGWSHCHQLPVLLQGSGQSAHI*LDVRRE
Trigger: TTCCCGCCTGACATCAAGCCAAATATGAGCGCTCTG...CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCGCTCGTCATTGTGGTTaGCTGGGGGTGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPAARHCG*LGVVAE
Trigger: CTCTGCCACCACCCCCAGCCAACCACAATGACGAGC...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCTGGCTGCTGGGGTGTaGTACGTGCAAACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPLAAGV*YVQTLL
Trigger: CAACAAGGTTTGCACGTACCACACCCCAGCAGCCAG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCACAGACGGAGAGAAATaGTTTGCTTGCTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPTDGEK*FACCPR
Trigger: TCTTGGACAGCAAGCAAACCATTTCTCTCCGTCTGT...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGCTCCCCAGGAGGCCCTaGAGAGTGGTAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVLPRRP*RVVSQM
Trigger: CATCTGGCTTACCACTCTCCAGGGCCTCCTGGGGAG...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGAAAGGGGCCGGGGCAATaGCAGCTTTCCTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGKGPGQ*QLSYRK
Trigger: TTTTCTGTAGGAAAGCTGCCATTGCCCCGGCCCCTT...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCAGCTTAATTCCCAGATaGTCTGACACAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PGLQGASRLSALESRGSTSLIPR*SDTGRG
Trigger: GCCACGCCCTGTGTCAGACCATCTGGGAATTAAGCT...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCAGCTTAATTCCCAGATaGTCTGACACAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPSLIPR*SDTGRG
Trigger: GCCACGCCCTGTGTCAGACCATCTGGGAATTAAGCT...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCTGCCTGTGGGCCGGGTaGATGCTTGGCATGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RACLQTAGCRHHARFRASCLWAG*MLGMEK
Trigger: CTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTGTCCATCTTGCGGAGTaGCGGCAGAAACATGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAVHLAE*RQKHAC
Trigger: ACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGAC...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGGTCCATCTTGCGGAGTaGCGGCAGAAACATGCCTGT +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASVHLAE*RQKHAC
Trigger: ACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGAC...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGAGACCTGTAGCTCTCTaGGGGATCAGGGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALRPVAL*GIRASI
Trigger: AATGGAAGCCCTGATCCCCCAGAGAGCTACAGGTCT...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGCGAGAGAGACAGACGTaGAGAACTCACAAATGCTAT +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQRERQT*RTHKCY
Trigger: ATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCG...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGCGGCTGCCGCGGGCTaGGTGAAGTCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMAAAAG*VKSAGG
Trigger: GCCGCCTGCTGACTTCACTCAGCCCGCGGCAGCCGC...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCGTTCCCTGGAACAGGTaGGTGGGGGTAATTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RACLQTAGCRHHARFRASVPWNR*VGVICH
Trigger: GTGGCAAATTACCCCCACTCACCTGTTCCAGGGAAC...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGTGCTGCCACTGCCGCTaGTGCAGCGGCTGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMCCHCR*CSGCRG
Trigger: CCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCA...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTAGTTGTTGCCTTGGCTaGTGTAGTCGTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHASCCLG*CSRWSW
Trigger: CCAACTCCAACGACTACAGCAGCCAAGGCAACAACT...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCGCTGTGTGGATGGCTaGTGGGAGCGGCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLRCVDG*WERPVA
Trigger: CGCCACAGGCCGCTCCCAGCAGCCATCCACACAGCG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCGTCCATGGCCTGGGCTaGAGCCGGGGGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTVHGLG*SRGQLG
Trigger: TCCAAGCTGCCCCCGGCTGCAGCCCAGGCCATGGAC...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCGCCCCGGATGCCTCTaGACCTCCCTCACACCCTGG +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLRPGCL*TSLTPW
Trigger: CCAGGGTGTGAGGGAGGTGCAGAGGCATCCGGGGCG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCGAAGATGGGGGTGATTaGCTGTACTTGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RACLQTAGCRHHARFRASEDGGD*LYLALP
Trigger: GGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGCGGTCATTGGTCTGCTaGATGTGCCTGTCCATAGAA +
Preference number: 4 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPRSLVC*MCLSIE
Trigger: TTCTATGGACAGGCACATCCAGCAGACCAATGACCG...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCCGCTGGAAGGCCCGTaGGTCTCCGCACCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLPLEGP*VSAPVQ
Trigger: CTGGACTGGTGCGGAGACCCACGGGCCTTCCAGCGG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGAAGATGGAAGAACCTTaGGGACACTGGAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: CTGAPSLPLCSERAAAGEKMEEP*GHWKVI
Trigger: GATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTT...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGCTGGGCCGAGCTTGCTaGTGGAGGCTTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHALGRAC*WRLAGE
Trigger: CTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAG...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTAGACCTGTAGCTCTCTaGGGGATCAGGGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDARPVAL*GIRASI
Trigger: AATGGAAGCCCTGATCCCCCAGAGAGCTACAGGTCT...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGTCTACCCGAGAGCCATaGACGTTGTCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVSTREP*TLSSLS
Trigger: ACTGAGGCTGGACAACGTTCATGGCTCTCGGGTAGA...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGACGTGGGATCGATGGTaGCCTCTTCAAACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTTWDRW*PLQTRS
Trigger: ACTCCGAGTTTGAAGAGGTCACCATCGATCCCACGT...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCAGCTCGTCAGGATTTGTaGGTTCGGGAAGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: PEHSGRACLQTAGCRHHAARQDL*VREGDP
Trigger: TGGATCTCCTTCCCGAACTCACAAATCCTGACGAGC...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCAGAGGCTGCTTTTGCTTaGGTGAGCAGGAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PEHSGRACLQTAGCRHHAEAAFA*VSRSLG
Trigger: ACCCAAACTCCTGCTCACTCAAGCAAAAGCAGCCTC...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTAGTCGGTCATTGGTCTaGTGGATGTGCCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPSRSLV*WMCLSI
Trigger: TATGGACAGGCACATCCAGCAGACCAATGACCGACT...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCATGCTGCTTGATGCACTaGAGTCGGTCATTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PEHSGRACLQTAGCRHHACCLMH*SRSLVC
Trigger: GCAGACCAATGACCGACTGCAGTGCATCAAGCAGCA...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTAACGACCCATCACTGTaGGACAGAGTGGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPNDPSL*DRVGFM
Trigger: CATGAAACCCACTCTGTCGCACAGTGATGGGTCGTT...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTTCCCCGAGGGCGTCATaGCAGCCGCCATGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSSPRAS*QPPCSR
Trigger: CCGCGAGCATGGCGGCTGGCATGACGCCCTCGGGGA...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGGCGGCCTGTGGCGGCTaGCGGGGAGGCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKAACGG*RGGWEG
Trigger: TCCTTCCCAGCCTCCCCGGCAGCCGCCACAGGCCGC...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTCCACGCACTGCCCTTaGCATCTGATTGGACAAAGA +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASSTHCP*HLIGQR
Trigger: TCTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGA...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGGGGAAGGCCAGAGGCTaGTTTTGCTTGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVGKARG*FCLSEQ
Trigger: CTGCTCACTCAAGCAAAAGCAGCCTCTGGCCTTCCC...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGCACTGTGCGACAGAGTaGGTTTCATGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTHCATE*VSWSSW
Trigger: CCATGAGCTCCATGAAACCCACTCTGTCGCACAGTG...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGGGCTCTGGGATGTGTTaGTTACTCCCCAAACCGTGG +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVGSGMC*LLPKPW
Trigger: CCACGGTTTGGGGAGTAACCAACACATCCCAGAGCC...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGGCTGGTTTCCATAGTTaGGCTCTCCAGGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVAGFHS*ALQGMA
Trigger: GGCCATACCCTGGAGAGCCCAACTATGGAAACCAGC...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCACATCAGCGTCTGGTaGACCGTGGGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLHISVW*TVGRRW
Trigger: CCACCTGCGGCCCACGGTCCACCAGACGCTGATGTG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCAAACTCGGAGTGTTaGATGGCATTCAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPSNSEC*MAFRIP
Trigger: GGGAATCCTGAATGCCATCCAACACTCCGAGTTTGA...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTTGGGCATGATCATCTaGCTGGGACTCATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASLGMII*LGLMVL
Trigger: CAAGACCATGAGTCCCAGCCAGATGATCATGCCCAA...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCCCACAGAGGAGAGCTaGGGACCACCCACAGCGGAC +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLPTEES*GPPTAD
Trigger: GTCCGCTGTGGGTGGTCCCCAGCTCTCCTCTGTGGG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCTTGGCATGGAAAAGTaGCTTGCAGAGGCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPLGMEK*LAEASF
Trigger: AAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CAA 72 bp TTTACATATGTACACACGTCCCTTGAGTCGCTGCTGTaGACACGGCCCTGTGTGGACGGGTCAGGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: FTYVHTSLESLL*TRPCVDGSGPR
Trigger: CCTCGGGCCTGACCCGTCCACACAGGGCCGTGTCAACAGCAGCGACTCAAGGGACGTGTGTACATATGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGTTCCTTTTCTCCAGGTaGCTTCATAGCTTTAAATTG +
Preference number: 4 (lower is better)
Translates to: RVRPEARREQTCSSLGDQFLFSR*LHSFKL
Trigger: CAATTTAAAGCTATGAAGTCACCTGGAGAAAAGGAA...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCCTGCTTTTGCTTGAGTaGGCAGGAGTTTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSLLLLE*AGVWVR
Trigger: TCTCACCCAAACTCCTGCTCACTCAAGCAAAAGCAG...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCGAACAACACGCTATTTaGAAAAACCTCGACAACGGG +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPEQHAI*KNLDNG
Trigger: CCCGTTGTCGAGGTTTTTTCAAATAGCGTGTTGTTC...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCAGCCCATCAGGCTCTaGTCGAAGGGCCGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLQPIRL*SKGRWK
Trigger: CTTCCAGCGGCCCTTCGAGCAGAGCCTGATGGGCTG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGAACGACCCATCACTGTaGGACAGAGTGGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTNDPSL*DRVGFM
Trigger: CATGAAACCCACTCTGTCGCACAGTGATGGGTCGTT...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCGGTTGCTGGTGGTCATaGCCGACGCCATGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLGCWWS*PTPWGC
Trigger: GCAACCCCATGGCGTCGGGCATGACCACCAGCAACC...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGTTTCCCAGAGGTTTGTaGTTTTCTGTGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RHWARVATCYLALACPCQFPRGL*FSVVGG
Trigger: ACCACCCACCACAGAAAAGCACAAACCTCTGGGAAA...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCGCCAGAGGCTGCTTTTaGTTGAGTGAGCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSARGCF*LSEQEF
Trigger: AAACTCCTGCTCACTCAAGCAAAAGCAGCCTCTGGC...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCCGGTCATTGGTCTGCTaGATGTGCCTGTCCATAGAA +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSRSLVC*MCLSIE
Trigger: TTCTATGGACAGGCACATCCAGCAGACCAATGACCG...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCATGCTCGAAGGGCCGCTaGAAGGCCCGTGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSCSKGR*KARGSP
Trigger: CGGAGACCCACGGGCCTTCCAGCGGCCCTTCGAGCA...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCAGGCTGGTTCATGAATTaGCTGTTATACGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PEHSGRACLQTAGCRHHAGWFMN*LLYAWV
Trigger: CACCCAGGCGTATAACAGCCAATTCATGAACCAGCC...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTGCTGGTTCATGCCCATaGGAGGGCCGCTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: PVALWGIRASIREKVLAVAGSCP*EGRSSP
Trigger: CGGGGATGAGCGGCCCTCCCATGGGCATGAACCAGC...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGATGGCCCCGACCGGGTaGCCCTCAGTTGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHAMAPTG*PSVVLK
Trigger: TTTGAGAACAACTGAGGGCCACCCGGTCGGGGCCAT...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCTTCCTCTCGGGAGGGTaGTCTTCAGGCCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTFLSGG*SSGLRW
Trigger: CCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAA...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCCATTGCCCTGGGCTCTaGTTTCTGCACCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GKDLSRVQDHLCLWALSTHCPGL*FLHLPG
Trigger: GCCGGGGAGGTGCAGAAACCAGAGCCCAGGGCAATG...GGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGCCTGCAGGTACATACTaGTGCACATGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVPAGTY*CTCPWP
Trigger: AGGCCATGGACATGTGCACCAGTATGTACCTGCAGG...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTCAAAGAATTTACAGATaGGACCCCAGTGACGGGACA +
Preference number: 4 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPQRIYR*DPSDGT
Trigger: TGTCCCGTCACTGGGGTCCCATCTGTAAATTCTTTG...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCCCAGGCCACAGACACTaGGCAAGGGTGGCCACATGC +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTPGHRH*ARVATC
Trigger: GCATGTGGCCACCCTTGCCCAGTGTCTGTGGCCTGG...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGAATCCCAGGCCTTTCTaGGGCAAAGTATCAACGCAA +
Preference number: 4 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASNPRPF*GKVSTQ
Trigger: TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATT...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGGCACCTGTCACAACCTaGGGCTTGCTCCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTAPVTT*GLLPPR
Trigger: CCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGC...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCCTTGGCATGGAAAAGTaGCTTGCAGAGGCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSLGMEK*LAEASF
Trigger: AAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAG...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGCTCCCCAAACCGTGGTaGCCACGGAAAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMLPKPW*PRKGSR
Trigger: CCGGCTCCCTTTCCGTGGTCACCACGGTTTGGGGAG...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTTCAGAGTATATTACATaGGCGAGAGAGACAGACGTG +
Preference number: 4 (lower is better)
Translates to: LSILRSGGRNMPVGRVDASEYIT*ARETDV
Trigger: CACGTCTGTCTCTCTCGCTCATGTAATATACTCTGA...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTTGGTCTGCTGGATGTaGCTGTCCATAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPLVCWM*LSIEFI
Trigger: AATGAATTCTATGGACAGGCACATCCAGCAGACCAA...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCAGTCGGTCATTGGTCTaGTGGATGTGCCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPASRSLV*WMCLSI
Trigger: TATGGACAGGCACATCCAGCAGACCAATGACCGACT...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGGGATTCTGTAAGTGCTaGTTGATGCACTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVGFCKC*LMHCSR
Trigger: CCGACTGCAGTGCATCAAGCAGCACTTACAGAATCC...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCGGATTCTGTAAGTGCTaGTTGATGCACTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPAGFCKC*LMHCSR
Trigger: CCGACTGCAGTGCATCAAGCAGCACTTACAGAATCC...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGAGCTGTGGCTGCTGCTaGTGCCACTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTSCGCC*CHCRCC
Trigger: GCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCT...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGATGTAGTTACTGTAGCTaGTTCCCGAGAACGTGTTAT +
Preference number: 4 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGCSYCS*FPRTCY
Trigger: ATAACACGTTCTCGGGAAGCAGCTACAGTAACTACA...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCTCTCGCAATTCAGCTaGAGGTATGACTCCAGATCA +
Preference number: 4 (lower is better)
Translates to: RACLQTAGCRHHARFRASLSQFS*RYDSRS
Trigger: TGATCTGGAGTCATACCTGCAGCTGAATTGCGAGAG...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAAGTCGTTGGAGTTGGTaGCCCCTGGGGGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSSRWSW*PLGEAG
Trigger: TCCCGCCTCCCCCAGGGGGCACCAACTCCAACGACT...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCGCGTTGGCTTGTCCCTaGCAGCTGACTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTALACP*QLTEGW
Trigger: CCATCCCTCAGTCAGCTGGCAGGGACAAGCCAACGC...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCATGCTCCCGCCCCGGATaGCTCTGCACCTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSCSRPG*LCTSLT
Trigger: TGTGAGGGAGGTGCAGAGGCATCCGGGGCGGGAGCA...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCCATGGAAAAGTGGCTTaGAGAGGCCTCGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPHGKVA*RGLVFA
Trigger: AGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATG...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGCCTGCTTTCGGGGTATaGCAGCTCAGTGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVPAFGV*QLSEKQ
Trigger: CTGTTTTTCACTGAGCTGCCATACCCCGAAAGCAGG...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCCGGCATTGTGGAAGTTaGCAGGATTCTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPRHCGS*QDSVSA
Trigger: AGCACTTACAGAATCCTGCCAACTTCCACAATGCCG...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCCGGCATTGTGGAAGTTaGCAGGATTCTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSRHCGS*QDSVSA
Trigger: AGCACTTACAGAATCCTGCCAACTTCCACAATGCCG...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGCCAAGGACCTGGCTCTaGGATGTGTTGGTTACTCCC +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHAPRTWL*DVLVTP
Trigger: GGGAGTAACCAACACATCCCAGAGCCAGGTCCTTGG...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTTTGGGGGCTGGGTACTaGCCTGGCTGGGTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSLGAGY*PGWVGN
Trigger: GTTCCCCACCCAGCCAGGCCAGTACCCAGCCCCCAA...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGCCCTCTTACCGGGCTaGTTCCTCTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMALLPG*FLSGGW
Trigger: CCACCCTCCCGAGAGGAACCAGCCCGGTAAGAGGGC...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCGCCTCAGGGACGTCCTaGCTCAGAAGATGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLASGTS*LRRCPG
Trigger: GCCAGGACATCTTCTGAGCCAGGACGTCCCTGAGGC...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCCTCCCCAGGAGGCCCTaGAGAGTGGTAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: GKDLSRVQDHLCLWALSTLPRRP*RVVSQM
Trigger: CATCTGGCTTACCACTCTCCAGGGCCTCCTGGGGAG...GGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCCAAAGAATTTACAGATaGGACCCCAGTGACGGGACA +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPQRIYR*DPSDGT
Trigger: TGTCCCGTCACTGGGGTCCCATCTGTAAATTCTTTG...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACCCGCCTCAGGTGCTaGGCCCAGAGATGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSTRLRC*AQRWLQ
Trigger: CTGCAACCATCTCTGGGCTCAGCACCTGAGGCGGGT...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTTATGTGTGTACGTGTaGATCACCTGTGATCATGAT +
Preference number: 4 (lower is better)
Translates to: EDGGDCLYLALPACLLAPLCVYV*ITCDHD
Trigger: ATCATGATCACAGGTGATTCACACGTACACACATAA...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCTCACTGCCACCAACTaGCAGTGCTCCTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLLTATN*QCSSKA
Trigger: AGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGGAGCCCAGAGATGGTTaGAGGAGGTGCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKEPRDG*RRCPGP
Trigger: AGGCCCCGGGCACCTCCTGCAACCATCTCTGGGCTC...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACATTGGCCCTTCCCGCCTaGCTGCTGGCTCCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTLALPA*LLAPCP
Trigger: TGGACAGGGAGCCAGCAGGCAGGCGGGAAGGGCCAA...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCAGTCCAGCAGCTCCGTaGCGGCATTGTGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLSPAAP*RHCGSW
Trigger: CCAACTTCCACAATGCCGCCACGGAGCTGCTGGACT...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGTGTTATACGCCTGGGTaGGACCCATCGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHACYTPG*DPSVHT
Trigger: AGTATGGACCGATGGGTCCCACCCAGGCGTATAACA...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCCCTCCAGGGTTCCCGTaGGGGAAGTCAAAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTPPGFP*GKSKLP
Trigger: TGGCAACTTTGACTTCCCCCACGGGAACCCTGGAGG...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGTGTGGTGGGTGGTGGTaGGTGGGCTGGTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTCGGWW*VGWSHC
Trigger: GCAGTGAGACCAGCCCACCCACCACCACCCACCACA...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCAGTTTATGGGGTATCTTaGCTTATAGGTCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PEHSGRACLQTAGCRHHAVYGVS*LIGQGS
Trigger: TGACCCCTGACCTATAAGCCAAGATACCCCATAAAC...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTCTGTTCCCCAAGCCTaGGCCCTGTCTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GKDLSRVQDHLCLWALSTSVPQA*ALSELG
Trigger: TCCAAGCTCAGACAGGGCCCAGGCTTGGGGAACAGA...GGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGCTGGAAGTCAACAGCTaGGGCCACCTTTCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHALEVNS*GHLSGK
Trigger: TTTACCGGAAAGGTGGCCCCAGCTGTTGACTTCCAG...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCGAGGTGCCCGGGGCCTaGGCTGCAGGGAGCATCTCG +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVEVPGA*AAGSIS
Trigger: CGAGATGCTCCCTGCAGCCCAGGCCCCGGGCACCTC...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTCCGGAAGGGAAGCTCTaGGCCGAGCTTGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSPEGKL*AELAGG
Trigger: TCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGG...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CAA 72 bp CTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTaGTCTACCTGCACCTGTCACAACCTGGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LSRVQDHLCLWA*STCTCHNLGLA
Trigger: AGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTTGGGACTCATGGTCTTaGACCGCTTGGAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PVALWGIRASIREKVLAVWDSWS*TAWRGC
Trigger: GCATCCCCTCCAAGCGGTTCAAGACCATGAGTCCCA...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp GGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTCCCTGCCAGCTGACTaGGGGATGGCTCTAAATAGC +
Preference number: 4 (lower is better)
Translates to: GKDLSRVQDHLCLWALSTSLPAD*GMALNS
Trigger: GCTATTTAGAGCCATCCCTCAGTCAGCTGGCAGGGA...GGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAACCCGCCTCAGGTGCTaGGCCCAGAGATGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQTRLRC*AQRWLQ
Trigger: CTGCAACCATCTCTGGGCTCAGCACCTGAGGCGGGT...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp GGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGTACACACGTCCCTTaGGTCGCTGCTGTTGACACG +
Preference number: 4 (lower is better)
Translates to: GKDLSRVQDHLCLWALSTCTHVP*VAAVDT
Trigger: CGTGTCAACAGCAGCGACTCAAGGGACGTGTGTACA...GGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTAATGAATGCATCTGTTaGCACGTCTCTATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LVSLPPTASAPPRLGAHANECIC*HVSISH
Trigger: ATGAGAAATAGAGACGTGTCAACAGATGCATTCATT...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGCCGACGCCATGGGGTTaGCGCCTGGATTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKPTPWG*RLDSWG
Trigger: ACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGG...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGTCATGCCAGCCGCCATaGTCGCGGGGTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: YMSERDRRGELTNAITNRSCQPP*SRGSCC
Trigger: GCAGCATGAACCCCGCGAGCATGGCGGCTGGCATGA...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGGGGGGAAGTCAAAGTTaGCATGGCCTTGGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHAGGSQS*HGLGSC
Trigger: ACAACTACCAAGGCCATGGCAACTTTGACTTCCCCC...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGAGGCCCTGACTGGCTaGTGGGGTGTGGTACGTGCA +
Preference number: 4 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQEALTG*WGVVRA
Trigger: TGCACGTACCACACCCCAGCAGCCAGTCAGGGCCTC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGGCTCTGGGCCGAGCTTaGTGGTGGAGGCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKALGRA*WWRLAG
Trigger: TCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGC...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGGTGGCGGCAGAAACATaGCTGTGGGCCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: YMSERDRRGELTNAITNRVAAET*LWAGWM
Trigger: CATCCACCCGGCCCACAGGCATGTTTCTGCCGCCAC...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCCCGCTGGAAGGCCCGTaGGTCTCCGCACCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVPLEGP*VSAPVQ
Trigger: CTGGACTGGTGCGGAGACCCACGGGCCTTCCAGCGG...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGGTCAGGCGGGAAGGGTaGTTTGACGTCTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTVRREG*FDVLAG
Trigger: CCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGAC...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTGTTGGCTGGGGGTGGTaGCAGAGCGCTCATATTTGG +
Preference number: 4 (lower is better)
Translates to: PVALWGIRASIREKVLAVVGWGW*QSAHIW
Trigger: CCAAATATGAGCGCTCTGCCACCACCCCCAGCCAAC...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAATGTAGTCGTTGGAGTTaGTGCCCCCTGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQCSRWS*CPLGEA
Trigger: CGCCTCCCCCAGGGGGCACCAACTCCAACGACTACA...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGAGGTCGCTGTGTGGATaGCTGCTGGGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKRSLCG*LLGAAC
Trigger: ACAGGCCGCTCCCAGCAGCCATCCACACAGCGACCT...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGTTCTGTGGTGGGTGGTaGTGGGTGGGCTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTFCGGW*WVGWSH
Trigger: GTGAGACCAGCCCACCCACCACCACCCACCACAGAA...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGACGGAACATGATACATaGATAAAGCTTCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: LQAVGTTHGSEPAGREALTEHDT*IKLQTK
Trigger: CTTGGTTTGAAGCTTTATCCATGTATCATGTTCCGT...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGAGGACTCAAGTCTGCTaGGAGCGTCTGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMRTQVC*ERLEEE
Trigger: CTCCTCCTCCAGACGCTCTCAGCAGACTTGAGTCCT...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGCAGATGGGACCCCAGTaGCGGGACAACCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKQMGPQ*RDNLAS
Trigger: TGATGCCAGGTTGTCCCGTCACTGGGGTCCCATCTG...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTATTAACATGGGCAAATaGGATACCTCAGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: KMGVIACTWPFPPACWLPINMGK*DTSVLQ
Trigger: TTGTAACACTGAGGTATCTCATTTGCCCATGTTAAT...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTTGGGCGTTGTCTACCTaGACCTGTCACAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSWALST*TCHNLG
Trigger: CCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCA...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGAGTCCAGCAGCTCCGTaGCGGCATTGTGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTSPAAP*RHCGSW
Trigger: CCAACTTCCACAATGCCGCCACGGAGCTGCTGGACT...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGAGGTCAAAGCCTTGCTaGGCTGCCACCCGACTGACC +
Preference number: 4 (lower is better)
Translates to: YMSERDRRGELTNAITNRRSKPC*AATRLT
Trigger: GGTCAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCT...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGCATGGGGTTGCCGCCTaGATTCATGGGGTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMHGVAA*IHGVVG
Trigger: GCCAACAACCCCATGAATCCAGGCGGCAACCCCATG...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACATCATGCCCGACGCCATaGGGTTGCCGCCTGGATTCA +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTSCPTP*GCRLDS
Trigger: TGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGA...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGTCATTGTGGTTGGCTaGGGGTGGTGGCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQVIVVG*GWWQSA
Trigger: AGCGCTCTGCCACCACCCCCAGCCAACCACAATGAC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCGCAGGTGGAACACATaGTTGCTGACCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTRRWNT*LLTARL
Trigger: CAACCTGGCGGTCAGCAACCATGTGTTCCACCTGCG...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGGACAGAGGGAGGGGCTaGACAGACACCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: YMSERDRRGELTNAITNRDRGRG*TDTIAL
Trigger: CAGGGCAATGGTGTCTGTCCAGCCCCTCCCTCTGTC...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTCTCGACTCTCCGCACTaGAAAGCCGTGGATCCACCT +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSLDSPH*KAVDPP
Trigger: AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAG...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCGGCCGAGCTTGCTGGTaGAGGCTTGCTGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVGRACW*RLAGEG
Trigger: CCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCC...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCATGCCTGTGGGCCGGGTaGATGCTTGGCATGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSCLWAG*MLGMEK
Trigger: CTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACAGGATGCGCCGGAATGTaGTGGGGCACTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTGCAGM*WGTSET
Trigger: TGTCTCTGAAGTGCCCCATCACATTCCGGCGCATCC...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTCTTGTCCCTGCCAGCTaGCTGAGGGATGGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSLVPAS*LRDGSK
Trigger: TTTAGAGCCATCCCTCAGTCAGCTGGCAGGGACAAG...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCTCTAGTTTTTCCACGTaGTGGAGTTCCAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: CLWALSTCTCHNLGLAPASSFST*WSSKLF
Trigger: AAAAAGCTTGGAACTCCATCACGTGGAAAAACTAGA...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCATTGGCTGAGAACTGCTaGTGCTGCCCCGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSLAENC*CCPANC
Trigger: ACAGTTTGCGGGGCAGCAGCAGCAGTTCTCAGCCAA...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCCTGGGGTGTGGTACGTaGAAACCTTGTTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLLGCGT*KPCCME
Trigger: CTCCATACAACAAGGTTTGCACGTACCACACCCCAG...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGCTGGACAGACACCATTaGCCTGGGCTCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMLDRHH*PGLWFL
Trigger: CAGAAACCAGAGCCCAGGGCAATGGTGTCTGTCCAG...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTGCAGGTACATACTGGTaGACATGTCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSAGTYW*TCPWPG
Trigger: CCCAGGCCATGGACATGTGCACCAGTATGTACCTGC...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCTGGAGAACTCACAAATaGTATAACCAACAGGATCTA +
Preference number: 4 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPWRTHK*YNQQDL
Trigger: TAGATCCTGTTGGTTATAGCATTTGTGAGTTCTCCA...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGGGCTGGGTGGGGAACTaGCTGTTTGGTCCATATTGC +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTGWVGN*LFGPYC
Trigger: GCAATATGGACCAAACAGCCAGTTCCCCACCCAGCC...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAGGTGGTTTGACGTCTTaGCTGGGGGACAGGTATGGA +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSGGLTS*LGDRYG
Trigger: TCCATACCTGTCCCCCAGCCAAGACGTCAAACCACC...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGTTTCCTGCATGGGGTaGCTGAGGGGTTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQVSCMG*LRGFSR
Trigger: CCTCGAGAAACCCCTCAGCCACCCCATGCAGGAAAC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACAGTCTGGGACAGTGACTaGAAGTCAACAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTVWDSD*KSTAGA
Trigger: GGCCCCAGCTGTTGACTTCCAGTCACTGTCCCAGAC...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGCTCGACTCTCCGCACTaGAAAGCCGTGGATCCACCT +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKLDSPH*KAVDPP
Trigger: AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAG...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCGACCATCTCTGTTTATaGGCGTTGTCTACCTGCACC +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTDHLCL*ALSTCT
Trigger: GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTC...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGACGGAACATGATACATaGATAAAGCTTCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTTEHDT*IKLQTK
Trigger: CTTGGTTTGAAGCTTTATCCATGTATCATGTTCCGT...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
3UTR CAA 72 bp CTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGTTTTaGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: LGMEKWLAEASF*LRLLMAPSSRP
Trigger: CGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGGGTATGGCAGCTCAGTaGAAAACAGCGGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: YMSERDRRGELTNAITNRGMAAQ*KTAAPL
Trigger: GAGAGGAGCCGCTGTTTTTCACTGAGCTGCCATACC...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGAGGCTGCTTTTGCTTaGGTGAGCAGGAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMEAAFA*VSRSLG
Trigger: ACCCAAACTCCTGCTCACTCAAGCAAAAGCAGCCTC...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACACCAAGAAGATGGGGGTaGTTGCCTGTACTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTPRRWG*LPVLGP
Trigger: AGGGCCAAGTACAGGCAATCACCCCCATCTTCTTGG...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCGCAGGATTCTGTAAGTaGTGCTTGATGCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLAGFCK*CLMHCS
Trigger: ACTGCAGTGCATCAAGCAGCACTTACAGAATCCTGC...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTGAACTTGTCTCGGTTTaGAGCACACACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSELVSV*STHSQQ
Trigger: CTGCTGGCTGTGTGTGCTGCAAACCGAGACAAGTTC...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGCCACCAACTGCCAGTaGTCCTCCAAGGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLATNCQ*SSKARG
Trigger: GCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGGGGAAGGCCAGAGGCTaGTTTTGCTTGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKGKARG*FCLSEQ
Trigger: CTGCTCACTCAAGCAAAAGCAGCCTCTGGCCTTCCC...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGACTGCAGTCGGTCATTaGTCTGCTGGATGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTTAVGH*SAGCAC
Trigger: ACAGGCACATCCAGCAGACCAATGACCGACTGCAGT...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCACACTGTGCGACAGAGTaGGTTTCATGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSHCATE*VSWSSW
Trigger: CCATGAGCTCCATGAAACCCACTCTGTCGCACAGTG...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGCCCATCGGTCCATACTaGTTTATATCCTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: EDGRTLGTLEGHLESAHAPIGPY*FISLFC
Trigger: ACAGAACAAGGATATAAACCAGTATGGACCGATGGG...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCGGGCTCTCCAGGGTATaGCCTCTTTATGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLGLSRV*PLYVLN
Trigger: ATTCAGAACATAAAGAGGCCATACCCTGGAGAGCCC...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTGGGGAACTGGCTGTTTaGTCCATATTGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PVALWGIRASIREKVLAVGELAV*SILLVS
Trigger: GGAAACCAGCAATATGGACCAAACAGCCAGTTCCCC...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGAACCTTGGGGACACTaGAAGGTCATCTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMEPWGH*KVIWNR
Trigger: CCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTC...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGTCCCCAAGCAGGAATaGCAGACCCCCTCTCAAACA +
Preference number: 4 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQVPKQE*QTPSQT
Trigger: TGTTTGAGAGGGGGTCTGCCATTCCTGCTTGGGGAC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCTGGAAGTCAACAGCTaGGGCCACCTTTCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTLEVNS*GHLSGK
Trigger: TTTACCGGAAAGGTGGCCCCAGCTGTTGACTTCCAG...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGAAGGGGCCGGGGCAATaGCAGCTTTCCTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMKGPGQ*QLSYRK
Trigger: TTTTCTGTAGGAAAGCTGCCATTGCCCCGGCCCCTT...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACAGAGCAGGAGTTTGGGTaGGATTGTGATGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTEQEFG*DCDGGG
Trigger: TCCTCCACCATCACAATCTCACCCAAACTCCTGCTC...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCACTGCTTTTGCTTGAGTaGGCAGGAGTTTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSLLLLE*AGVWVR
Trigger: TCTCACCCAAACTCCTGCTCACTCAAGCAAAAGCAG...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTTGTAGCTGTGGCTGCTaGTGCTGCCACTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLCSCGC*CCHCRC
Trigger: GCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACA...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TACATGAGCGAGAGAGACAGACGTGGAGAACTCACAAATGCTATAACCAACAGGAGCACTGCACATGCTTaGAATCGTGTCCTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: YMSERDRRGELTNAITNRSTAHA*NRVLEQ
Trigger: CTGCTCGAGGACACGATTGCAAGCATGTGCAGTGCT...CCTGTTGGTTATAGCATTTGTGAGTTCTCCACGTCTGTCTCTCTCGCTCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCTCCAGATCAAAGCACTaGACATGCTTGCAATCGTGT +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTSRSKH*TCLQSC
Trigger: ACACGATTGCAAGCATGTGCAGTGCTTTGATCTGGA...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTGCCAGAGGCTGCTTTTaGTTGAGTGAGCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSARGCF*LSEQEF
Trigger: AAACTCCTGCTCACTCAAGCAAAAGCAGCCTCTGGC...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCCCCTTGCCATCTGATTaGACAAAGAGAACTAGGACA +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTPLPSD*TKRTRT
Trigger: TGTCCTAGTTCTCTTTGTCCAATCAGATGGCAAGGG...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTCCTGTGAGCAGAGTGTaGACACACCCTGATAAGAAC +
Preference number: 4 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSPVSRV*THPDKN
Trigger: GTTCTTATCAGGGTGTGTCCACACTCTGCTCACAGG...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CACACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAGACCATCTCTGTTTATaGGCGTTGTCTACCTGCACC +
Preference number: 4 (lower is better)
Translates to: HTLIRTRMNPRPFWGKVSDHLCL*ALSTCT
Trigger: GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTC...TGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CCA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGGTGGATGCTTGGCATaGAAAAGTGGCTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQGGCLA*KSGLQR
Trigger: CCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGTCTGTAAGTGCTGCTTaGTGCACTGCAGTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKSVSAA*CTAVGH
Trigger: ATGACCGACTGCAGTGCATCAAGCAGCACTTACAGA...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCGCCCGGGCTGGTTCATaGATTGGCTGTTATACGCCT +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVARAGS*IGCYTP
Trigger: AGGCGTATAACAGCCAATTCATGAACCAGCCCGGGC...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCCGCTCATATTTGGCTTaGTGTCAGGCGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVRSYLA*CQAGRV
Trigger: CACCCTTCCCGCCTGACATCAAGCCAAATATGAGCG...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp GATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCTGCACCTTGGTCTGCTGGATGTaGCTGTCCATAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: DLSRVQDHLCLWALSTCTLVCWM*LSIEFI
Trigger: AATGAATTCTATGGACAGGCACATCCAGCAGACCAA...GGTGCAGGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGCTGAGAACTGCTGCTaGTGCCCCGCAAACTGTGGG +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLAENCC*CPANCG
Trigger: CCCACAGTTTGCGGGGCAGCAGCAGCAGTTCTCAGC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGCATGGAAAAGTGGCTTaGAGAGGCCTCGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMHGKVA*RGLVFA
Trigger: AGCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATG...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR GCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACACGGAGAGAAATGGTTTaGTTGCTGTCCAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTRREMV*LLSKSN
Trigger: GTTGCTCTTGGACAGCAAGCAAACCATTTCTCTCCG...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCGGTGGATGCTTGGCATaGAAAAGTGGCTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVGGCLA*KSGLQR
Trigger: CCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACC...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTTCCCTGCCAGCTGACTaGGGGATGGCTCTAAATAGC +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLSLPAD*GMALNS
Trigger: GCTATTTAGAGCCATCCCTCAGTCAGCTGGCAGGGA...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGGTTGGGTGTACACCTaGTCTCTCTGTTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLGWVYT*SLCSPS
Trigger: GCTTGGGGAACAGAGAGAGCAGGTGTACACCCAACC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGAGCAGGAGTTTGGGTaGGATTGTGATGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLEQEFG*DCDGGG
Trigger: TCCTCCACCATCACAATCTCACCCAAACTCCTGCTC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGTGGCTACACGGAACATaGTACATGGATAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKWLHGT*YMDKAS
Trigger: TGAAGCTTTATCCATGTATCATGTTCCGTGTAGCCA...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACATGGCTACACGGAACATaGTACATGGATAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTWLHGT*YMDKAS
Trigger: TGAAGCTTTATCCATGTATCATGTTCCGTGTAGCCA...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGACATTCCAAGAGAAATaGATGCATCTGTTGACACGT +
Preference number: 4 (lower is better)
Translates to: SERIREGSLQSSGPSLFMTFQEK*MHLLTR
Trigger: ACGTGTCAACAGATGCATTCATTTCTCTTGGAATGT...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCAATCCCAGGCCTTTCTaGGGCAAAGTATCAACGCAA +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVNPRPF*GKVSTQ
Trigger: TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATT...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR TCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTAGGCCTCGTTTTTGCTaGGGTTACTTATGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLRPRFC*GYLWLQ
Trigger: TTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCT...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGCAGGATTCTGTAAGTaGTGCTTGATGCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLAGFCK*CLMHCS
Trigger: ACTGCAGTGCATCAAGCAGCACTTACAGAATCCTGC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR GCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTTCAAAGCACTGCACATaGTTGCAATCGTGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLSKHCT*LQSCPR
Trigger: TCGAGGACACGATTGCAAGCATGTGCAGTGCTTTGA...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCTTTTTCTCTGCTTTCTaGGTGTGTTTATGGGGTATC +
Preference number: 4 (lower is better)
Translates to: KVSTQEARTPKEGICKSVFFSAF*VCLWGI
Trigger: GATACCCCATAAACACACTCAGAAAGCAGAGAAAAA...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR TCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTGAACAACACGCTATTTaGAAAAACCTCGACAACGGG +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLEQHAI*KNLDNG
Trigger: CCCGTTGTCGAGGTTTTTTCAAATAGCGTGTTGTTC...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CCA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTTTACAGTCTAGAAGATaGAAGAACCTTGGGGACACT +
Preference number: 4 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLLQSRR*KNLGDT
Trigger: AGTGTCCCCAAGGTTCTTCCATCTTCTAGACTGTAA...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 90 bp GGAGGAGCGCAGCGAGGGCGCCGAGATCCGCTCGGCTCCGGCTCCTaGTCCGCGCCGGCTGGGGCTGGGGTCACCGCGCTGCGCCGGCGT +
Preference number: 5 (lower is better)
Translates to: GGAQRGRRDPLGSGS*SAPAGAGVTALRRR
Trigger: ACGCCGGCGCAGCGCGGTGACCCCAGCCCCAGCCGGCGCGGAGCAGGAGCCGGAGCCGAGCGGATCTCGGCGCCCTCGCTGCGCTCCTCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 90 bp AGGGCGCCGAGATCCGCTCGGCTCCGGCTCCTGCTCCGCGCCGGCTaGGGCTGGGGTCACCGCGCTGCGCCGGCGTTGCTCGCTCGCTCG +
Preference number: 5 (lower is better)
Translates to: RAPRSARLRLLLRAG*GWGHRAAPALLARS
Trigger: CGAGCGAGCGAGCAACGCCGGCGCAGCGCGGTGACCCCAGCCCCAGCCGGCGCGGAGCAGGAGCCGGAGCCGAGCGGATCTCGGCGCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 90 bp GCTGCTGCTGCTGCCACTGCCGCTGCTGCAGCGGCTGCCGCGGGCTaGGTGAAGTCAGCAGGCGGCCTGGTGTGCGGAGGGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: AAAAATAAAAAAAAG*VKSAGGLVCGGMPM
Trigger: CATGGGCATCCCTCCGCACACCAGGCCGCCTGCTGACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 90 bp TGTAGCTGTGGCTGCTGCTGCTGCCACTGCCGCTGCTGCAGCGGCTaGCGCGGGCTGAGTGAAGTCAGCAGGCGGCCTGGTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: CSCGCCCCHCRCCSG*RGLSEVSRRPGVRR
Trigger: CCTCCGCACACCAGGCCGCCTGCTGACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 90 bp GGCTGTGGCTGTAGCTGTGGCTGCTGCTGCTGCCACTGCCGCTGCTaGAGCGGCTGCCGCGGGCTGAGTGAAGTCAGCAGGCGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GCGCSCGCCCCHCRC*SGCRGLSEVSRRPG
Trigger: ACCAGGCCGCCTGCTGACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACAGCCACAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 90 bp CGTGGCTGTGGCTGTAGCTGTGGCTGCTGCTGCTGCCACTGCCGCTaGTGCAGCGGCTGCCGCGGGCTGAGTGAAGTCAGCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: RGCGCSCGCCCCHCR*CSGCRGLSEVSRRP
Trigger: AGGCCGCCTGCTGACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACAGCCACAGCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 90 bp GGAGGAGGTGGCAGCCCCAGCAGTAGTACGAAATCAGAACACAGCTaGCGTGAGTCCGGGCGCTGCGAGCGCCGCTGCCGCCGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GGGGSPSSSTKSEHS*RESGRCERRCRRWR
Trigger: CCTCCAGCGGCGGCAGCGGCGCTCGCAGCGCCCGGACTCACGGCAGCTGTGTTCTGATTTCGTACTACTGCTGGGGCTGCCACCTCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 90 bp AGTGGCCGTGGCTGTGGCTGTAGCTGTGGCTGCTGCTGCTGCCACTaGCGCTGCTGCAGCGGCTGCCGCGGGCTGAGTGAAGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGRGCGCSCGCCCCH*RCCSGCRGLSEVSR
Trigger: CCTGCTGACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACAGCCACAGCCACGGCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 90 bp TGCCACAGTGGCCGTGGCTGTGGCTGTAGCTGTGGCTGCTGCTGCTaGCACTGCCGCTGCTGCAGCGGCTGCCGCGGGCTGAGTGAAGTC +
Preference number: 5 (lower is better)
Translates to: CHSGRGCGCSCGCCC*HCRCCSGCRGLSEV
Trigger: GACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACAGCCACAGCCACGGCCACTGTGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 90 bp TGGGCTGCCACCCGACTGACCACCGTCAAACAGCCCATCAGGCTCTaGTCGAAGGGCCGCTGGAAGGCCCGTGGGTCTCCGCACCAGTCC +
Preference number: 5 (lower is better)
Translates to: WAATRLTTVKQPIRL*SKGRWKARGSPHQS
Trigger: GGACTGGTGCGGAGACCCACGGGCCTTCCAGCGGCCCTTCGAGCAGAGCCTGATGGGCTGTTTGACGGTGGTCAGTCGGGTGGCAGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 90 bp CTGACCACCGTCAAACAGCCCATCAGGCTCTGCTCGAAGGGCCGCTaGAAGGCCCGTGGGTCTCCGCACCAGTCCAGCAGCTCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: LTTVKQPIRLCSKGR*KARGSPHQSSSSVA
Trigger: CGCCACGGAGCTGCTGGACTGGTGCGGAGACCCACGGGCCTTCCAGCGGCCCTTCGAGCAGAGCCTGATGGGCTGTTTGACGGTGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS TCA 90 bp GGCTGCATGGGGAGTTTCCCAGGGGGATCGCTCTGGCGGCTCTTCTaGTGTCGGAGCAGCAGCAGGCGGCCGAGCTCTTCGCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: GCMGSFPGGSLWRLF*CRSSSRRPSSSHQE
Trigger: CTCCTGGTGCGAAGAGCTCGGCCGCCTGCTGCTGCTCCGACATCAGAAGAGCCGCCAGAGCGATCCCCCTGGGAAACTCCCCATGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
ENST00000611351.1
CDS CCA 90 bp CCCTCTAAGGCTGAGGAGGGGTTAAAGGTCAGGTCGCTGTGTGGATaGCTGCTGGGAGCGGCCTGTGGCGGCTGCCGGGGAGGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: PSKAEEGLKVRSLCG*LLGAACGGCRGGWE
Trigger: TTCCCAGCCTCCCCGGCAGCCGCCACAGGCCGCTCCCAGCAGCCATCCACACAGCGACCTGACCTTTAACCCCTCCTCAGCCTTAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCAGCTCGTCATTGTGGTaGGCTGGGGGTGGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPSSSLW*AGGGGR
Trigger: TCTGCCACCACCCCCAGCCAACCACAATGACGAGCT...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCGGCTTGTGGGAGGTCTaGTTGTCGCCGCGCTCAATG +
Preference number: 5 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPGLWEV*LSPRSM
Trigger: CATTGAGCGCGGCGACAACAAGACCTCCCACAAGCC...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGGGCCCATGTGTAAGTCCGACTaGATGGGCACCGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: HCHQLPVLLQGSGPMLGPMCKSD*MGTGRQ
Trigger: CTGGCGGCCGGTGCCCATCAAGTCGGACTTACACAT...GGGCCCCAGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTACGCCGGTCAGCAGCTaGCGGCCCCTCCACCTCACT +
Preference number: 5 (lower is better)
Translates to: LSILRSGGRNMPVGRVDATPVSS*RPLHLT
Trigger: AGTGAGGTGGAGGGGCCGCAAGCTGCTGACCGGCGT...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGGCGGGAAGGGTGGTTaGACGTCTTGGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAGGKGG*TSWLGD
Trigger: GTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGCC...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp AGACACTGGGCAAGGGTGGCCACATGCTACCTGGCGTTGGCTTGTCCCTGCCAGCCGTTGAGGGTCGTGTaGCCCGAGGAGGCAGCCACG +
Preference number: 5 (lower is better)
Translates to: RHWARVATCYLALACPCQPLRVV*PEEAAT
Trigger: CGTGGCTGCCTCCTCGGGCAACACGACCCTCAACGG...CTGGCAGGGACAAGCCAACGCCAGGTAGCATGTGGCCACCCTTGCCCAGTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGACAGGGCGTGGCCACTaGCCAGGCCACAGACACTGG +
Preference number: 5 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPTGRGH*PGHRHW
Trigger: CCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTGT...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS TCA 90 bp TCCAGCGAAGGCTCCGGCATGTCGGACGCTCCCTGCGCTCCGGCCTaGCCCTCTAAGGCTGAGGAGGGGTTAAAGGTCAGGTCGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSEGSGMSDAPCAPA*PSKAEEGLKVRSLC
Trigger: ACACAGCGACCTGACCTTTAACCCCTCCTCAGCCTTAGAGGGTCAGGCCGGAGCGCAGGGAGCGTCCGACATGCCGGAGCCTTCGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGCCCGACGCCATGGGGTaGCCGCCTGGATTCATGGGG +
Preference number: 5 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTPDAMG*PPGFMG
Trigger: CCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGG...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCAGCCGCAGCTCGTCATaGTGGTTGGCTGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: PGLQGASRLSALESRGSTSRSSS*WLAGGG
Trigger: ACCACCCCCAGCCAACCACAATGACGAGCTGCGGCT...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTACAGGGCGTGGCCACTaGCCAGGCCACAGACACTGG +
Preference number: 5 (lower is better)
Translates to: LSILRSGGRNMPVGRVDATGRGH*PGHRHW
Trigger: CCAGTGTCTGTGGCCTGGCAAGTGGCCACGCCCTGT...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGGTCACAACCTGGGGCTaGCTCCCGCCCCGGATGCCT +
Preference number: 5 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTVTTWG*LPPRMP
Trigger: AGGCATCCGGGGCGGGAGCAAGCCCCAGGTTGTGAC...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCAGTCACAACCTGGGGCTaGCTCCCGCCCCGGATGCCT +
Preference number: 5 (lower is better)
Translates to: PEHSGRACLQTAGCRHHAVTTWG*LPPRMP
Trigger: AGGCATCCGGGGCGGGAGCAAGCCCCAGGTTGTGAC...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGGTGATTGCCTGTACTaGGCCCTTCCCGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LQAVGTTHGSEPAGREALGDCLY*ALPACL
Trigger: CAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACC...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGCCGGGTGGCCCTCAGTaGTTCTCAAATAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: YRAGSSREGGLQACAGHGPGGPQ*FSNRDR
Trigger: CCTGTCTCTATTTGAGAACAACTGAGGGCCACCCGG...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTGCACTCCGGAAGAGCTaGTCTCCAGACTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAALRKS*SPDCRL
Trigger: CAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGC...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGCTCTGTTTATGGGCGTaGTCTACCTGCACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: RVRPEARREQTCSSLGDQLCLWA*STCTCH
Trigger: GTGACAGGTGCAGGTAGACAACGCCCATAAACAGAG...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCGGGCCGGGTGGATGCTaGGCATGGAAAAGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: EDGGDCLYLALPACLLAPGPGGC*AWKSGL
Trigger: CAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCC...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGGTGATTGCCTGTACTaGGCCCTTCCCGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPGDCLY*ALPACL
Trigger: CAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACC...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 90 bp GCCTGGGTTGCTGGTGGTCATGCCCGACGCCATGGGGTTGCCGCCTaGATTCATGGGGTTGTTGGCATTGGCCATAGGGTTCCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: AWVAGGHARRHGVAA*IHGVVGIGHRVPKD
Trigger: GTCCTTGGGAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCACCAGCAACCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CCA 90 bp GGCCCCCGCGGCCCGGGCTGGTTCATGAATTGGCTGTTATACGCCTaGGTGGGACCCATCTGGAAAGAGGAACAGACCGGTCCATACTGG +
Preference number: 5 (lower is better)
Translates to: GPRGPGWFMNWLLYA*VGPIWKEEQTGPYW
Trigger: CCAGTATGGACCGGTCTGTTCCTCTTTCCAGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGCGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp TGGGTGGGCTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGTGGCTCTGGGATGTGTaGGTTACTCCCCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: WVGWSHCHQLPVLLQGSGWLWDV*VTPQTV
Trigger: CACGGTTTGGGGAGTAACCAACACATCCCAGAGCCA...CCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAGCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGGTGGATGCTGCAAACTGTGGGGAGTaGAGGCCTGGGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LSILRSGGRNMPVGRVDAANCGE*RPGLLV
Trigger: CACCAGCAACCCAGGCCTCAACTCCCCACAGTTTGC...AGCATCCACCCGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGGGGTGGTTTGACGTCTaGGCTGGGGGACAGGTATGG +
Preference number: 5 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASGWFDV*AGGQVW
Trigger: CCATACCTGTCCCCCAGCCAAGACGTCAAACCACCC...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGGCCCCCGAGAGACGTaGTCTTTCCCAGAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: LQAVGTTHGSEPAGREALGPRET*SFPEVC
Trigger: ACAAACCTCTGGGAAAGACAACGTCTCTCGGGGGCC...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CGGGTCAGGCCCGAGGCCCGTCGGGAGCAGACCTGTAGCTCTCTGGGGGATCAGGCAGAGGCCTCGTTTTaGCTGAGGTTACTTATGGCT +
Preference number: 5 (lower is better)
Translates to: RVRPEARREQTCSSLGDQAEASF*LRLLMA
Trigger: AGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGC...CTGATCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGGCCTGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGCTCCCTGTCCATCTaGCGGAGTGGCGGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPGSLSI*RSGGRN
Trigger: GTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCC...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCGGCTCCCTGTCCATCTaGCGGAGTGGCGGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: RACLQTAGCRHHARFRASGSLSI*RSGGRN
Trigger: GTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCC...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTCTTGAGTCGCTGCTGTaGACACGGCCCTGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: KMGVIACTWPFPPACWLPLESLL*TRPCVD
Trigger: GTCCACACAGGGCCGTGTCAACAGCAGCGACTCAAG...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGCTGGCTCCCTGTCCATCTTGCGGAGTGGCGGCAGAAACATGCCTGTGGGCCGGACTTCGGGGTGAACTaGTCTCGGTTTGCAGCACAC +
Preference number: 5 (lower is better)
Translates to: CWLPVHLAEWRQKHACGPDFGVN*SRFAAH
Trigger: GTGTGCTGCAAACCGAGACAAGTTCACCCCGAAGTC...CGGCCCACAGGCATGTTTCTGCCGCCACTCCGCAAGATGGACAGGGAGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGACTTCGGGGTGAACTaGTCTCGGTTTGCAGCACAC +
Preference number: 5 (lower is better)
Translates to: LQAVGTTHGSEPAGREALDFGVN*SRFAAH
Trigger: GTGTGCTGCAAACCGAGACAAGTTCACCCCGAAGTC...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp TGCACTGGTGCACCCTCCCTACCCCTCTGTTCTGAGAGGGCTGCAGCGGGGGAGGGGCTGGTTCATGAATaGGCTGTTATACGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: CTGAPSLPLCSERAAAGEGLVHE*AVIRLG
Trigger: ACCCAGGCGTATAACAGCCAATTCATGAACCAGCCC...CTCCCCCGCTGCAGCCCTCTCAGAACAGAGGGGTAGGGAGGGTGCACCAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCGTGAGTGGGGGTAATTaGCCACAGGAACCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSVSGGN*PQEPAW
Trigger: CCAGGCCGGTTCCTGTGGCAAATTACCCCCACTCAC...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCACATGCTACCTGGCGTaGGCTTGTCCCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSTCYLA*ACPCQL
Trigger: CAGCTGGCAGGGACAAGCCAACGCCAGGTAGCATGT...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS GCA 90 bp TATGGCAGCTCAGTGAAAAACAGCGGCTCCTCTCCTCACACCCCTTaGAGCATTGGTCCGACGCCAACGGGCCTCCTCCTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: YGSSVKNSGSSPHTP*SIGPTPTGLLLFLL
Trigger: CAGGAGGAAGAGGAGGAGGCCCGTTGGCGTCGGACCAATGCTGCAAGGGGTGTGAGGAGAGGAGCCGCTGTTTTTCACTGAGCTGCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 90 bp GCCCGTGGGTCTCCGCACCAGTCCAGCAGCTCCGTGGCGGCATTGTaGAAGTTGGCAGGATTCTGTAAGTGCTGCTTGATGCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: ARGSPHQSSSSVAAL*KLAGFCKCCLMHCS
Trigger: ACTGCAGTGCATCAAGCAGCACTTACAGAATCCTGCCAACTTCCACAATGCCGCCACGGAGCTGCTGGACTGGTGCGGAGACCCACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCAAGCTCCGTGGCGGCATaGTGGAAGTTGGCAGGATTC +
Preference number: 5 (lower is better)
Translates to: PEHSGRACLQTAGCRHHASSVAA*WKLAGF
Trigger: GAATCCTGCCAACTTCCACAATGCCGCCACGGAGCT...TGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CTGGTCTCACTGCCACCAACTGCCAGTGCTCCTCCAAGGCTCGGGGCCCATGCTAAGCACTGCACATGCTaGCAATCGTGTCCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: LVSLPPTASAPPRLGAHAKHCTC*QSCPRA
Trigger: TGCTCGAGGACACGATTGCAAGCATGTGCAGTGCTT...AGCATGGGCCCCGAGCCTTGGAGGAGCACTGGCAGTTGGTGGCAGTGAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp GAAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCCCATCAGGGTCGTCCTaGATGTGTAAGTCCGACTTG +
Preference number: 5 (lower is better)
Translates to: EDGGDCLYLALPACLLAPPSGSS*MCKSDL
Trigger: CAAGTCGGACTTACACATCAAGGACGACCCTGATGG...GGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCCTGGGACTCATGGTCTaGAACCGCTTGGAGGGGATG +
Preference number: 5 (lower is better)
Translates to: CREHLDSPHWKAVDPPVSLGLMV*NRLEGM
Trigger: CATCCCCTCCAAGCGGTTCAAGACCATGAGTCCCAG...GCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGACATGCTACCTGGCGTaGGCTTGTCCCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVTCYLA*ACPCQL
Trigger: CAGCTGGCAGGGACAAGCCAACGCCAGGTAGCATGT...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS GCA 90 bp AGTCACTACAGTAAGAGGAACTGCTGCTTGCTGAGTGGCGGCACATaGCAGCCCAGGGCCAAGCACTTCACGGACACCTCCTCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: SHYSKRNCCLLSGGT*QPRAKHFTDTSSSP
Trigger: GGGACTTGAGGAGGTGTCCGTGAAGTGCTTGGCCCTGGGCTGGCATGTGCCGCCACTCAGCAAGCAGCAGTTCCTCTTACTGTAGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 90 bp CTCGTCATTGTGGTTGGCTGGGGGTGGTGGCAGAGCGCTCATATTTaGCTTGATGTCAGGCGGGAAGGGTGGTTTGACGTCTTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LVIVVGWGWWQSAHI*LDVRREGWFDVLAG
Trigger: CCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGACATCAAGCCAAATATGAGCGCTCTGCCACCACCCCCAGCCAACCACAATGACGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 90 bp TGGCTGCTGGGGTGTGGTACGTGCAAACCTTGTTGTATGGAGGGGTaGGGCTGGTCAGAGCTGCCAGCGTGTGGCATAGTTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: WLLGCGTCKPCCMEG*GWSELPACGIVSCM
Trigger: CATGCAGGAAACTATGCCACACGCTGGCAGCTCTGACCAGCCCCACCCCTCCATACAACAAGGTTTGCACGTACCACACCCCAGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGATTCTGTAAGTGCTGCTaGATGCACTGCAGTCGGTCA +
Preference number: 5 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGFCKCC*MHCSRS
Trigger: TGACCGACTGCAGTGCATCAAGCAGCACTTACAGAA...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp GAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGTGAGCAGAGTGAGCTCCGTGGCGGCATaGTGGAAGTTGGCAGGATTC +
Preference number: 5 (lower is better)
Translates to: EHLDSPHWKAVDPPVSRVSSVAA*WKLAGF
Trigger: GAATCCTGCCAACTTCCACAATGCCGCCACGGAGCT...CACTCTGCTCACAGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGGTCCAGGTCAAAGCCTaGCTGGGCTGCCACCCGACT +
Preference number: 5 (lower is better)
Translates to: EDGRTLGTLEGHLESAHAVQVKA*LGCHPT
Trigger: AGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGAC...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCATGGGGTTGTTGGCATaGGCCATAGGGTTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPMGLLA*AIGFPR
Trigger: CCTTGGGAACCCTATGGCCAATGCCAACAACCCCAT...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCTGGATTCATGGGGTTGTaGGCATTGGCCATAGGGTTC +
Preference number: 5 (lower is better)
Translates to: LGCREHLDSPHWKAVDPPGFMGL*ALAIGF
Trigger: GAACCCTATGGCCAATGCCAACAACCCCATGAATCC...AGGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCTACGTGCAAACCTTGTaGTATGGAGGGGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FMGVVYLHLSQPGACSRPYVQTL*YGGVGL
Trigger: CAGCCCCACCCCTCCATACAACAAGGTTTGCACGTA...GGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TACCGGGCTGGTTCCTCTCGGGAGGGTGGTCTTCAGGCCTGCGCTGGGCATGGGAGAGAAATGGTTTGCTaGCTGTCCAAGAGCAACGTT +
Preference number: 5 (lower is better)
Translates to: YRAGSSREGGLQACAGHGREMVC*LSKSNV
Trigger: AACGTTGCTCTTGGACAGCAAGCAAACCATTTCTCT...CCCATGCCCAGCGCAGGCCTGAAGACCACCCTCCCGAGAGGAACCAGCCCGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 90 bp GGCCACCTCCCCTTGAGGCCGTTCTTCCTGGAGCACATGTGCCCCTaGACTCCAGGGACACTTTCAGAGCCTCTTGCTCACACCATTATG +
Preference number: 5 (lower is better)
Translates to: GHLPLRPFFLEHMCP*TPGTLSEPLAHTIM
Trigger: CATAATGGTGTGAGCAAGAGGCTCTGAAAGTGTCCCTGGAGTTCAGGGGCACATGTGCTCCAGGAAGAACGGCCTCAAGGGGAGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 90 bp GGAGGACAACAAGGCGGCAGACTTCGGGGTGAACTTGTCTCGGTTTaGAGCACACACAGCCAGCAGTCTGTAGCCGAGGTCCAGGTCAAA +
Preference number: 5 (lower is better)
Translates to: GGQQGGRLRGELVSV*STHSQQSVAEVQVK
Trigger: TTTGACCTGGACCTCGGCTACAGACTGCTGGCTGTGTGTGCTGCAAACCGAGACAAGTTCACCCCGAAGTCTGCCGCCTTGTTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 90 bp CTCATATTTGGCTTGATGTCAGGCGGGAAGGGTGGTTTGACGTCTTaGCTGGGGGACAGGTATGGAGGGATGCTGCTCCCAGGGGTCATG +
Preference number: 5 (lower is better)
Translates to: LIFGLMSGGKGGLTS*LGDRYGGMLLPGVM
Trigger: CATGACCCCTGGGAGCAGCATCCCTCCATACCTGTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGACATCAAGCCAAATATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 90 bp TGGTGGCAGAGCGCTCATATTTGGCTTGATGTCAGGCGGGAAGGGTaGTTTGACGTCTTGGCTGGGGGACAGGTATGGAGGGATGCTGCT +
Preference number: 5 (lower is better)
Translates to: WWQSAHIWLDVRREG*FDVLAGGQVWRDAA
Trigger: AGCAGCATCCCTCCATACCTGTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGACATCAAGCCAAATATGAGCGCTCTGCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGGCGGCATTGTGGAAGTaGGCAGGATTCTGTAAGTGC +
Preference number: 5 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTAALWK*AGFCKC
Trigger: GCACTTACAGAATCCTGCCAACTTCCACAATGCCGC...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CCTGGGCTGCAGGGAGCATCTCGACTCTCCGCACTGGAAAGCCGTGGATCCACCGCTGTTTGGTCCATATaGCTGGTTTCCATAGTTGGG +
Preference number: 5 (lower is better)
Translates to: PGLQGASRLSALESRGSTAVWSI*LVSIVG
Trigger: CCCAACTATGGAAACCAGCAATATGGACCAAACAGC...GGTGGATCCACGGCTTTCCAGTGCGGAGAGTCGAGATGCTCCCTGCAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp AAGATGGGGGTGATTGCCTGTACTTGGCCCTTCCCGCCTGCCTGCTGGCTCCCTTTGGTAGTTGTTGCCTaGGCTGCTGTAGTCGTTGGA +
Preference number: 5 (lower is better)
Translates to: KMGVIACTWPFPPACWLPLVVVA*AAVVVG
Trigger: TCCAACGACTACAGCAGCCAAGGCAACAACTACCAA...AGGGAGCCAGCAGGCAGGCGGGAAGGGCCAAGTACAGGCAATCACCCCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGCCTGTGGGCCGGGTGGATGCTTGGCATGGAAAAGTGGCTTGCAGAGGCCTCGGTCTTTCCCAGAGGTTaGTGCTTTTCTGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: CLWAGWMLGMEKWLAEASVFPRG*CFSVVG
Trigger: ACCCACCACAGAAAAGCACAAACCTCTGGGAAAGAC...CGAGGCCTCTGCAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCCACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 90 bp GGGGAAACACGTTCAATGTTGCCAACGTCACATAGCCAGGTCACCTaGACAACGGGATGGGGCCCGCCTCTCCTCATTTGCTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GETRSMLPTSHSQVT*TTGWGPPLLICSCC
Trigger: ACAGCAGGAGCAAATGAGGAGAGGCGGGCCCCATCCCGTTGTTCAGGTGACCTGGCTATGTGACGTTGGCAACATTGAACGTGTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 90 bp AAAGCCACTCTGACATTCTGGCCACCGAACTTCGCCCTGAACACATaGGGACGTTCAGAAATCACCCACCCCTCGCTGTCCTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: KATLTFWPPNFALNT*GRSEITHPSLSLGQ
Trigger: TTGCCCCAAGGACAGCGAGGGGTGGGTGATTTCTGAACGTCCCCATGTGTTCAGGGCGAAGTTCGGTGGCCAGAATGTCAGAGTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp AGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCTGGGGAACTGGCTGTTaGGTCCATATTGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: RACLQTAGCRHHARFRASWGTGC*VHIAGF
Trigger: GAAACCAGCAATATGGACCAAACAGCCAGTTCCCCA...GCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGTTGTGGGAGGTCTTGTaGTCGCCGCGCTCAATGGTG +
Preference number: 5 (lower is better)
Translates to: EDGRTLGTLEGHLESAHALWEVL*SPRSMV
Trigger: CACCATTGAGCGCGGCGACAACAAGACCTCCCACAA...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGGCAGAGGCCTCGTTTTaGCTGAGGTTACTTATGGCT +
Preference number: 5 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTAEASF*LRLLMA
Trigger: AGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGC...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS TCA 90 bp TTCAGTTGGGAAACAGCAGAACCAGGTCTCAAACCCAGGAGCACCTaGCCCCTAAGCCCCTGCCTCTTTGTCCAAGTGTGCTGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: FSWETAEPGLKPRST*PLSPCLFVQVCWSP
Trigger: TGGACTCCAGCACACTTGGACAAAGAGGCAGGGGCTTAGGGGTCAGGTGCTCCTGGGTTTGAGACCTGGTTCTGCTGTTTCCCAACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS TCA 90 bp CACAGGTGCAGGTGCAGGGGTGACACCAATGACCAGGAATTCTGCTaGAGCCTCATCCGAGATTGCCTCCTTTGGCGTGGGCTAACAGAT +
Preference number: 5 (lower is better)
Translates to: HRCRCRGDTNDQEFC*SLIRDCLLWRGLTD
Trigger: ATCTGTTAGCCCACGCCAAAGGAGGCAATCTCGGATGAGGCTTCAGCAGAATTCCTGGTCATTGGTGTCACCCCTGCACCTGCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 90 bp CATTCATGGATGTCCCTCCAGGGTTCCCGTGGGGGAAGTCAAAGTTaGCATGGCCTTGGTAGTTGTTGCCTTGGCTGCTGTAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: HSWMSLQGSRGGSQS*HGLGSCCLGCCSRW
Trigger: CCAACGACTACAGCAGCCAAGGCAACAACTACCAAGGCCATGGCAACTTTGACTTCCCCCACGGGAACCCTGGAGGGACATCCATGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGACACCCCTTGCAGCATaGGTCCGACGCCAACGGGCC +
Preference number: 5 (lower is better)
Translates to: SERIREGSLQSSGPSLFMTPLAA*VRRQRA
Trigger: GGCCCGTTGGCGTCGGACCAATGCTGCAAGGGGTGT...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp GAAGATGGAAGAACCTTGGGGACACTGGAAGGTCATCTGGAATCGGCACACGCGCCTGGATTCATGGGGTaGTTGGCATTGGCCATAGGG +
Preference number: 5 (lower is better)
Translates to: EDGRTLGTLEGHLESAHAPGFMG*LALAIG
Trigger: CCCTATGGCCAATGCCAACAACCCCATGAATCCAGG...CGCGTGTGCCGATTCCAGATGACCTTCCAGTGTCCCCAAGGTTCTTCCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CCAGGCAGCAGCCGGGAAGGGCGCAAAGAATTTACAGATGGGACCCCAGTGACGCCTGTTGACATTCCCTaGGCTGTAGTTACTGTAGCT +
Preference number: 5 (lower is better)
Translates to: PGSSREGRKEFTDGTPVTPVDIP*AVVTVA
Trigger: AGCTACAGTAACTACAGCCAAGGGAATGTCAACAGG...CGTCACTGGGGTCCCATCTGTAAATTCTTTGCGCCCTTCCCGGCTGCTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGAAGAAGACTCGGTCTTaGTCATTGAGTCCAGGTATT +
Preference number: 5 (lower is better)
Translates to: LQAVGTTHGSEPAGREALKKTRS*SLSPGI
Trigger: AATACCTGGACTCAATGACAAAGACCGAGTCTTCTT...CAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp GGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGGCGTTGTCTACCGCACTCCGGAAGAGCTaGTCTCCAGACTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GKDLSRVQDHLCLWALSTALRKS*SPDCRL
Trigger: CAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGC...GGTAGACAACGCCCATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCGGGCCGGGTGGATGCTaGGCATGGAAAAGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLGPGGC*AWKSGL
Trigger: CAAGCCACTTTTCCATGCCAAGCATCCACCCGGCCC...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS TCA 90 bp CTGGTGCCTGGGTTAGGGCTGTGCTCCCCAATGTGTACCCCAATGTaGCAGAGGAACACAGTCAACAGGATGCAATTCCAGAAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LVPGLGLCSPMCTPM*QRNTVNRMQFQKGA
Trigger: GGCTCCTTTCTGGAATTGCATCCTGTTGACTGTGTTCCTCTGTCACATTGGGGTACACATTGGGGAGCACAGCCCTAACCCAGGCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 90 bp TTCCCCAACACCTTGGCTGAGCTGGCTGTGCAGCCCAAGAGGCAGTaGCACTTCCTATACAGTGACCAAGTGTGGATGGAAACAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FPNTLAELAVQPKRQ*HFLYSDQVWMETRA
Trigger: AGCTCTTGTTTCCATCCACACTTGGTCACTGTATAGGAAGTGGCACTGCCTCTTGGGCTGCACAGCCAGCTCAGCCAAGGTGTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 90 bp ACACACCTAGTGTTCAGTTCTGGGCCATCGACAACCTGCCACCTGTaGAGGAGGTGGGAGAGCCAGGTTGGTGAAGGAACAAGACAACTT +
Preference number: 5 (lower is better)
Translates to: THLVFSSGPSTTCHL*RRWESQVGEGTRQL
Trigger: AAGTTGTCTTGTTCCTTCACCAACCTGGCTCTCCCACCTCCTGCACAGGTGGCAGGTTGTCGATGGCCCAGAACTGAACACTAGGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 90 bp GAGGAACACAGTCAACAGGATGCAATTCCAGAAAGGAGCCCCCTGTaGCCCTGCATTCCAAGGCTGAACTTGGGTGGCATTGTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: EEHSQQDAIPERSPL*PCIPRLNLGGIVLV
Trigger: TACGAGGACAATGCCACCCAAGTTCAGCCTTGGAATGCAGGGGCACAGGGGGCTCCTTTCTGGAATTGCATCCTGTTGACTGTGTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGGTCCAGGTCAAAGCCTaGCTGGGCTGCCACCCGACT +
Preference number: 5 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTVQVKA*LGCHPT
Trigger: AGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGAC...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGGAGCCGGGAGGCTGGTaGGTGTTCTGCTGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKEPGGW*VFCCQG
Trigger: CCCTTGGCAGCAGAACACCAACCAGCCTCCCGGCTC...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGGAGTTGAGGCCTGGGTaGCTGGTGGTCATGCCCGAC +
Preference number: 5 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTELRPG*LVVMPD
Trigger: GTCGGGCATGACCACCAGCAACCCAGGCCTCAACTC...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp ATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCCCGGACGAGAACGTGTTATTTaGTCCATTAAACTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: MGVVYLHLSQPGACSRPGRERVI*SIKLFW
Trigger: CCAGAACAGTTTAATGGACAAAATAACACGTTCTCG...TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCATGGTCTTGAACCGCTaGGAGGGGATGCCATCAGGG +
Preference number: 5 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLMVLNR*EGMPSG
Trigger: CCCTGATGGCATCCCCTCCAAGCGGTTCAAGACCAT...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TGTTTATGGGCGTTGTCTACCTGCACCTGTCACAACCTGGGGCTTGCTCCCGCCACGGAGAGAAATGGTTaGCTTGCTGTCCAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: CLWALSTCTCHNLGLAPATERNG*LAVQEQ
Trigger: TTGCTCTTGGACAGCAAGCAAACCATTTCTCTCCGT...GGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGTAGACAACGCCCATAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 90 bp TTACCTGGGTACCCAGATGGGCCAGCTGCTGCCAGCATCATTTTCTaGGGATTTACTTGTGACACACCCTCCAGGAAGCCTGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LPGYPDGPAAASIIF*GFTCDTPSRKPAFS
Trigger: AGAGAAGGCAGGCTTCCTGGAGGGTGTGTCACAAGTAAATCCTCAGAAAATGATGCTGGCAGCAGCTGGCCCATCTGGGTACCCAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS TCA 90 bp AGCCACCTTCCCTGTCTGGAAAATCAGGTGACCCTCACGGCCACATaGCATCCTGTGAGTCAGTGGTTTCTTCTTCCCCATCTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: SHLPCLENQVTLTAT*HPVSQWFLLPHLSV
Trigger: GACACTCAGATGGGGAAGAAGAAACCACTGACTCACAGGATGTCATGTGGCCGTGAGGGTCACCTGATTTTCCAGACAGGGAAGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS TCA 90 bp ATCGACAACCTGCCACCTGTGCAGGAGGTGGGAGAGCCAGGTTGGTaGAGGAACAAGACAACTTCTCCCGGGACAGACAATTTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: IDNLPPVQEVGEPGW*RNKTTSPGTDNLEK
Trigger: CTTCTCTAAATTGTCTGTCCCGGGAGAAGTTGTCTTGTTCCTTCACCAACCTGGCTCTCCCACCTCCTGCACAGGTGGCAGGTTGTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 90 bp CCCCATCTGAGTGTCTCTCTTGCCCAGAGGTCCTGTTGGTGGCTGTaGCCCAGTGCCTGGGAAAATACCCTTAATACTTGCTCAACAAAC +
Preference number: 5 (lower is better)
Translates to: PHLSVSLAQRSCWWL*PSAWENTLNTCSTN
Trigger: GTTTGTTGAGCAAGTATTAAGGGTATTTTCCCAGGCACTGGGGCACAGCCACCAACAGGACCTCTGGGCAAGAGAGACACTCAGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGCTCTCCTCACACCCCTaGCAGCATTGGTCCGACGCC +
Preference number: 5 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKLSSHP*QHWSDA
Trigger: GGCGTCGGACCAATGCTGCAAGGGGTGTGAGGAGAG...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 90 bp TCATGTGGGCAGGAGGAACTAAACCCAGGTCACCCAGTTAGTGGCTaGGCCAAGACAAGAGTCACTACAGTAAGAGGAACTGCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SCGQEELNPGHPVSG*AKTRVTTVRGTAAC
Trigger: GCAAGCAGCAGTTCCTCTTACTGTAGTGACTCTTGTCTTGGCTCAGCCACTAACTGGGTGACCTGGGTTTAGTTCCTCCTGCCCACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 90 bp GTGCAGCCCAAGAGGCAGTGCCACTTCCTATACAGTGACCAAGTGTaGATGGAAACAAGAGCTAAGAAACACGCTGTCTGCCTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: VQPKRQCHFLYSDQV*METRAKKHAVCLPV
Trigger: GACTGGAAGGCAGACAGCGTGTTTCTTAGCTCTTGTTTCCATCCACACTTGGTCACTGTATAGGAAGTGGCACTGCCTCTTGGGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 90 bp GAAAGTGTCAGTGTGGAAGAATCTACAACTCACGTTGTTGCAACATaGTGGCTGCTCTGGGTGACAGTGAGGCACCCACCACAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: ESVSVEESTTHVVAT*WLLWVTVRHPPQEV
Trigger: TACCTCCTGTGGTGGGTGCCTCACTGTCACCCAGAGCAGCCACCATGTTGCAACAACGTGAGTTGTAGATTCTTCCACACTGACACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp ACCCTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCACTGCAGTCGGTCATaGGTCTGCTGGATGTGCCTG +
Preference number: 5 (lower is better)
Translates to: TLIRTRMNPRPFWGKVSTHCSRS*VCWMCL
Trigger: CAGGCACATCCAGCAGACCAATGACCGACTGCAGTG...CGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 90 bp CAGAATACCTCCACTTGTTGCCAAGCCTCCCCGCCCATCCTAAGGTaGATACTGAGGGGAAATGTGCAGATCTTCAAGGAACTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: QNTSTCCQASPPILR*ILRGNVQIFKELKV
Trigger: GACCTTAAGTTCCTTGAAGATCTGCACATTTCCCCTCAGTATCCACCTTAGGATGGGCGGGGAGGCTTGGCAACAAGTGGAGGTATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGCACTGCAGTCGGTCATaGGTCTGCTGGATGTGCCTG +
Preference number: 5 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKHCSRS*VCWMCL
Trigger: CAGGCACATCCAGCAGACCAATGACCGACTGCAGTG...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTAGGTGGAAAAGTGTGTaGGGTAGGTGGGGTAGGATG +
Preference number: 5 (lower is better)
Translates to: PVALWGIRASIREKVLAVRWKSV*GRWGRM
Trigger: CATCCTACCCCACCTACCCAACACACTTTTCCACCT...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGCTGGACAGACACCATaGCCCTGGGCTCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQAGQTP*PWALVS
Trigger: AGAAACCAGAGCCCAGGGCAATGGTGTCTGTCCAGC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGACTCGGTCTTTGTCATaGAGTCCAGGTATTTTAAAA +
Preference number: 5 (lower is better)
Translates to: SQSTPEELVSRLQAVGTTTRSLS*SPGILK
Trigger: TTTTAAAATACCTGGACTCAATGACAAAGACCGAGT...CGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS GCA 90 bp AAGTGCTGCTTGATGCACTGCAGTCGGTCATTGGTCTGCTGGATGTaGCTGTCCATAGAATTCATTCTGGCCGTTTCACTAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: KCCLMHCSRSLVCWM*LSIEFILAVSLGST
Trigger: GGTAGAACCTAGTGAAACGGCCAGAATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGACTGCAGTGCATCAAGCAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTGCGGCATTGTGGAAGTaGGCAGGATTCTGTAAGTGC +
Preference number: 5 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSAALWK*AGFCKC
Trigger: GCACTTACAGAATCCTGCCAACTTCCACAATGCCGC...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAGCGCTCATATTTGGCTaGATGTCAGGCGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQALIFG*MSGGKG
Trigger: ACCCTTCCCGCCTGACATCAAGCCAAATATGAGCGC...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGAGCAGAGCGGTTTTATaGCACACAGGACACCTCCAG +
Preference number: 5 (lower is better)
Translates to: SERIREGSLQSSGPSLFMSRAVL*HTGHLQ
Trigger: CTGGAGGTGTCCTGTGTGCAATAAAACCGCTCTGCT...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTTTCCACGCACTGCCCTaGCCATCTGATTGGACAAAG +
Preference number: 5 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSFHALP*PSDWTK
Trigger: CTTTGTCCAATCAGATGGCAAGGGCAGTGCGTGGAA...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGGCATGGAAAAGTGGCTaGCAGAGGCCTCGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: SERIREGSLQSSGPSLFMAWKSG*QRPRFC
Trigger: GCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGC...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS TCA 90 bp TACCTGCCCACCAAGCTAGAGAAGAGAGTCCTCTGTGGGACCAGATaGCCCAACCCCTGTCCTAAGGCTCCAACAATTCAAATATTGTAT +
Preference number: 5 (lower is better)
Translates to: YLPTKLEKRVLCGTR*PNPCPKAPTIQILY
Trigger: ATACAATATTTGAATTGTTGGAGCCTTAGGACAGGGGTTGGGTCATCTGGTCCCACAGAGGACTCTCTTCTCTAGCTTGGTGGGCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 90 bp GGATTCTGTAAGTGCTGCTTGATGCACTGCAGTCGGTCATTGGTCTaGTGGATGTGCCTGTCCATAGAATTCATTCTGGCCGTTTCACTA +
Preference number: 5 (lower is better)
Translates to: GFCKCCLMHCSRSLV*WMCLSIEFILAVSL
Trigger: TAGTGAAACGGCCAGAATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGACTGCAGTGCATCAAGCAGCACTTACAGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 90 bp TTCTGTAAGTGCTGCTTGATGCACTGCAGTCGGTCATTGGTCTGCTaGATGTGCCTGTCCATAGAATTCATTCTGGCCGTTTCACTAGGT +
Preference number: 5 (lower is better)
Translates to: FCKCCLMHCSRSLVC*MCLSIEFILAVSLG
Trigger: ACCTAGTGAAACGGCCAGAATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGACTGCAGTGCATCAAGCAGCACTTACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 90 bp GTCAGCCCTTATAGACTGGAAGCATTTTGTCTCAGCTCTCTTTCTTaGAGAGGAGTTGGGGAAGCTCTCATGTGGGCAGGAGGAACTAAA +
Preference number: 5 (lower is better)
Translates to: VSPYRLEAFCLSSLS*RGVGEALMWAGGTK
Trigger: TTTAGTTCCTCCTGCCCACATGAGAGCTTCCCCAACTCCTCTCCAAGAAAGAGAGCTGAGACAAAATGCTTCCAGTCTATAAGGGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp TCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTGTTTATGTTCTGTAAGTGCTGCTaGATGCACTGCAGTCGGTCA +
Preference number: 5 (lower is better)
Translates to: SERIREGSLQSSGPSLFMFCKCC*MHCSRS
Trigger: TGACCGACTGCAGTGCATCAAGCAGCACTTACAGAA...CATAAACAGAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp AGTAGTCGTCCGAAAGGATCAGGGAAGGATCTCTCCAGAGTTCAGGACCATCTCTACTGGTTTATATCCTaGTTCTGTGTCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SSRPKGSGKDLSRVQDHLYWFIS*FCVSCR
Trigger: CCTGCAGGAGACACAGAACAAGGATATAAACCAGTA...GAGATGGTCCTGAACTCTGGAGAGATCCTTCCCTGATCCTTTCGGACGACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp TTTTTGCTGAGGTTACTTATGGCTCCAAGTAGTCGTCCGAAAGGATCAGGGAAGCTCTGTTTATGGGCGTaGTCTACCTGCACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: FLLRLLMAPSSRPKGSGKLCLWA*STCTCH
Trigger: GTGACAGGTGCAGGTAGACAACGCCCATAAACAGAG...CTTCCCTGATCCTTTCGGACGACTACTTGGAGCCATAAGTAACCTCAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS-3UTR CAA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTATCATCTCCATGACATaGGGCATGATCATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSIISMT*GMIIWL
Trigger: CAGCCAGATGATCATGCCCAATGTCATGGAGATGAT...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAAAAAGTTGCCATGGCCTaGGTAGTTGTTGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQKVAMA*VVVALA
Trigger: AGCCAAGGCAACAACTACCAAGGCCATGGCAACTTT...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CTGATAAGAACCAGAATGAATCCCAGGCCTTTCTGGGGCAAAGTATCAACGCAATTCAAACTCGGAGTGTaGGATGGCATTCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: LIRTRMNPRPFWGKVSTQFKLGV*DGIQDS
Trigger: GGAATCCTGAATGCCATCCAACACTCCGAGTTTGAA...TTGCGTTGATACTTTGCCCCAGAAAGGCCTGGGATTCATTCTGGTTCTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp CCTGTAGCTCTCTGGGGGATCAGGGCTTCCATTAGGGAGAAAGTATTAGCAGTTCTCAAACACAGACTCTaGTCCTTTTTCTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: PVALWGIRASIREKVLAVLKHRL*SFFSAF
Trigger: GAAAGCAGAGAAAAAGGACAAGAGTCTGTGTTTGAG...AACTGCTAATACTTTCTCCCTAATGGAAGCCCTGATCCCCCAGAGAGCTACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp AAAGTATCAACGCAAGAAGCAAGAACTCCTAAGGAAGGCATCTGTAAGTCTGTCGCATGGAAAAGTGGCTaGCAGAGGCCTCGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: KVSTQEARTPKEGICKSVAWKSG*QRPRFC
Trigger: GCAAAAACGAGGCCTCTGCAAGCCACTTTTCCATGC...GACAGACTTACAGATGCCTTCCTTAGGAGTTCTTGCTTCTTGCGTTGATACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS GCA 90 bp CCAGGAAGCCTGCCTTCTCTGACTCATATTGAGTTCTGTGCAGTCTaGTATGCTTCATTCCCTGGTGAGTCTCTGCTAAAAACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: PGSLPSLTHIEFCAV*YASFPGESLLKTFL
Trigger: AAGAAAAGTTTTTAGCAGAGACTCACCAGGGAATGAAGCATAGCAGACTGCACAGAACTCAATATGAGTCAGAGAAGGCAGGCTTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTTGGTACGTGCAAACCTaGTTGTATGGAGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLWYVQT*LYGGVG
Trigger: CCCCACCCCTCCATACAACAAGGTTTGCACGTACCA...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp GAAAAGTGGCTTGCAGAGGCCTCGTTTTTGCTGAGGTTACTTATGGCTCCAAGTAAGAAGACTCGGTCTTaGTCATTGAGTCCAGGTATT +
Preference number: 5 (lower is better)
Translates to: EKWLAEASFLLRLLMAPSKKTRS*SLSPGI
Trigger: AATACCTGGACTCAATGACAAAGACCGAGTCTTCTT...ACTTGGAGCCATAAGTAACCTCAGCAAAAACGAGGCCTCTGCAAGCCACTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 90 bp CAAACGAATGATGGACTTAGGGATAAATGTCAGAAAGTGTCAGTGTaGAAGAATCTACAACTCACGTTGTTGCAACATGGTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: QTNDGLRDKCQKVSV*KNLQLTLLQHGGCS
Trigger: AGAGCAGCCACCATGTTGCAACAACGTGAGTTGTAGATTCTTCCACACTGACACTTTCTGACATTTATCCCTAAGTCCATCATTCGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS-3UTR CAA 90 bp ATGCATCTGTTGACACGTCTCTATTTCTCATTTACATATGTACACACGTCCCTTAGTTGCCGCTCCTGTTaGCTTCTGACAGGTTATATG +
Preference number: 5 (lower is better)
Translates to: MHLLTRLYFSFTYVHTSLSCRSC*LLTGYM
Trigger: CATATAACCTGTCAGAAGCAAACAGGAGCGGCAACT...AAGGGACGTGTGTACATATGTAAATGAGAAATAGAGACGTGTCAACAGATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS-3UTR CAA 90 bp AAGGAAGGCATCTGTAAGTCTGTCTGGAGCTTAATTCCCAGATGGTCTGACACAACTCGGTCTTTGTCATaGAGTCCAGGTATTTTAAAA +
Preference number: 5 (lower is better)
Translates to: KEGICKSVWSLIPRWSDTTRSLS*SPGILK
Trigger: TTTTAAAATACCTGGACTCAATGACAAAGACCGAGT...TGTGTCAGACCATCTGGGAATTAAGCTCCAGACAGACTTACAGATGCCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS GCA 72 bp CAGCGAGGGCGCCGAGATCCGCTCGGCTCCGGCTCCTaGTCCGCGCCGGCTGGGGCTGGGGTCACCGCGCTG +
Preference number: 6 (lower is better)
Translates to: QRGRRDPLGSGS*SAPAGAGVTAL
Trigger: CAGCGCGGTGACCCCAGCCCCAGCCGGCGCGGAGCAGGAGCCGGAGCCGAGCGGATCTCGGCGCCCTCGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp GGCTGCTGCTGCTGCCACTGCCGCTGCTGCAGCGGCTaGCGCGGGCTGAGTGAAGTCAGCAGGCGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: GCCCCHCRCCSG*RGLSEVSRRPG
Trigger: ACCAGGCCGCCTGCTGACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 72 bp TGCCCATGGGAGGGCCGCTCATCCCCGAGGGCGTCATaGCAGCCGCCATGCTCGCGGGGTTCATGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: CPWEGRSSPRAS*QPPCSRGSCCP
Trigger: GGGGCAGCATGAACCCCGCGAGCATGGCGGCTGGCATGACGCCCTCGGGGATGAGCGGCCCTCCCATGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 72 bp TGCCACAGTGGCCGTGGCTGTGGCTGTAGCTGTGGCTaGTGCTGCTGCCACTGCCGCTGCTGCAGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: CHSGRGCGCSCG*CCCHCRCCSGC
Trigger: GCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACAGCCACAGCCACGGCCACTGTGGCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS GCA 72 bp GGCAGCCCCAGCAGTAGTACGAAATCAGAACACAGCTaGCGTGAGTCCGGGCGCTGCGAGCGCCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GSPSSSTKSEHS*RESGRCERRCR
Trigger: GCGGCAGCGGCGCTCGCAGCGCCCGGACTCACGGCAGCTGTGTTCTGATTTCGTACTACTGCTGGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp TGTAGCTGTGGCTGCTGCTGCTGCCACTGCCGCTGCTaGAGCGGCTGCCGCGGGCTGAGTGAAGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CSCGCCCCHCRC*SGCRGLSEVSR
Trigger: CCTGCTGACTTCACTCAGCCCGCGGCAGCCGCTGCAGCAGCGGCAGTGGCAGCAGCAGCAGCCACAGCTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000478357.1
CDS CCA 72 bp GCTGAGGAGGGGTTAAAGGTCAGGTCGCTGTGTGGATaGCTGCTGGGAGCGGCCTGTGGCGGCTGCCGGGGA +
Preference number: 6 (lower is better)
Translates to: AEEGLKVRSLCG*LLGAACGGCRG
Trigger: TCCCCGGCAGCCGCCACAGGCCGCTCCCAGCAGCCATCCACACAGCGACCTGACCTTTAACCCCTCCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp GGAGGCAGGCCCCCGCGGCCCGGGCTGGTTCATGAATaGGCTGTTATACGCCTGGGTGGGACCCATCGGTCC +
Preference number: 6 (lower is better)
Translates to: GGRPPRPGLVHE*AVIRLGGTHRS
Trigger: GGACCGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGCGGGGGCCTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 72 bp GGGAGTTTCCCAGGGGGATCGCTCTGGCGGCTCTTCTaGTGTCGGAGCAGCAGCAGGCGGCCGAGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: GSFPGGSLWRLF*CRSSSRRPSSS
Trigger: CGAAGAGCTCGGCCGCCTGCTGCTGCTCCGACATCAGAAGAGCCGCCAGAGCGATCCCCCTGGGAAACTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
ENST00000611351.1
CDS TCA 72 bp CCATGGAGGCAGGCCCCCGCGGCCCGGGCTGGTTCATaGATTGGCTGTTATACGCCTGGGTGGGACCCATCG +
Preference number: 6 (lower is better)
Translates to: PWRQAPAARAGS*IGCYTPGWDPS
Trigger: CGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGCGGGGGCCTGCCTCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 72 bp GGCTCCGGCATGTCGGACGCTCCCTGCGCTCCGGCCTaGCCCTCTAAGGCTGAGGAGGGGTTAAAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GSGMSDAPCAPA*PSKAEEGLKVR
Trigger: CCTGACCTTTAACCCCTCCTCAGCCTTAGAGGGTCAGGCCGGAGCGCAGGGAGCGTCCGACATGCCGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp ACCCGACTGACCACCGTCAAACAGCCCATCAGGCTCTaGTCGAAGGGCCGCTGGAAGGCCCGTGGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: TRLTTVKQPIRL*SKGRWKARGSP
Trigger: CGGAGACCCACGGGCCTTCCAGCGGCCCTTCGAGCAGAGCCTGATGGGCTGTTTGACGGTGGTCAGTCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 72 bp GAGGCAGGCCCCCGCGGCCCGGGCTGGTTCATGAATTaGCTGTTATACGCCTGGGTGGGACCCATCGGTCCA +
Preference number: 6 (lower is better)
Translates to: EAGPRGPGWFMN*LLYAWVGPIGP
Trigger: TGGACCGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGCGGGGGCCTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 72 bp CCATGGAGGCAGGCCCCCGCGGCCCGGGCTGGTTCATaGATTGGCTGTTATACGCCTGGGTGGGACCCATCT +
Preference number: 6 (lower is better)
Translates to: PWRQAPAARAGS*IGCYTPGWDPS
Trigger: AGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGCGGGGGCCTGCCTCCATGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp CACACGTGCTTCAGGTGCAGGGGCTTGTGGGAGGTCTaGTTGTCGCCGCGCTCAATGGTGAGGGGCGTGGCG +
Preference number: 6 (lower is better)
Translates to: HTCFRCRGLWEV*LSPRSMVRGVA
Trigger: CGCCACGCCCCTCACCATTGAGCGCGGCGACAACAAGACCTCCCACAAGCCCCTGCACCTGAAGCACGTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp GGAGGCAGGCCCCCGCGGCCCGGGCTGGTTCATGAATaGGCTGTTATACGCCTGGGTGGGACCCATCTGGAA +
Preference number: 6 (lower is better)
Translates to: GGRPPRPGLVHE*AVIRLGGTHLE
Trigger: TTCCAGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGCGGGGGCCTGCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp GAGGCAGGCCCCCGCGGCCCGGGCTGGTTCATGAATTaGCTGTTATACGCCTGGGTGGGACCCATCTGGAAA +
Preference number: 6 (lower is better)
Translates to: EAGPRGPGWFMN*LLYAWVGPIWK
Trigger: TTTCCAGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGCGGGGGCCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp TGCAAACCACCAGTGTTCCACACGCCGGTCAGCAGCTaGCGGCCCCTCCACCTCACTCCAGCTCCATCCTGC +
Preference number: 6 (lower is better)
Translates to: CKPPVFHTPVSS*RPLHLTPAPSC
Trigger: GCAGGATGGAGCTGGAGTGAGGTGGAGGGGCCGCAAGCTGCTGACCGGCGTGTGGAACACTGGTGGTTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp CCTGGGTTGCTGGTGGTCATGCCCGACGCCATGGGGTaGCCGCCTGGATTCATGGGGTTGTTGGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: PGLLVVMPDAMG*PPGFMGLLALA
Trigger: GGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCACCAGCAACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CAA 72 bp ACGTGCTTCAGGTGCAGGGGCTTGTGGGAGGTCTTGTaGTCGCCGCGCTCAATGGTGAGGGGCGTGGCGTTC +
Preference number: 6 (lower is better)
Translates to: TCFRCRGLWEVL*SPRSMVRGVAF
Trigger: GAACGCCACGCCCCTCACCATTGAGCGCGGCGACAACAAGACCTCCCACAAGCCCCTGCACCTGAAGCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp CTGGGTTGCTGGTGGTCATGCCCGACGCCATGGGGTTaGCGCCTGGATTCATGGGGTTGTTGGCATTGGCCA +
Preference number: 6 (lower is better)
Translates to: LGCWWSCPTPWG*RLDSWGCWHWP
Trigger: TGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCACCAGCAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CCA 72 bp AAACAGCGGCTCCTCTCCTCACACCCCTTGCAGCATTaGTCCGACGCCAACGGGCCTCCTCCTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: KQRLLSSHPLQH*SDANGPPPLPP
Trigger: AGGAGGAAGAGGAGGAGGCCCGTTGGCGTCGGACCAATGCTGCAAGGGGTGTGAGGAGAGGAGCCGCTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp AAAACAGCGGCTCCTCTCCTCACACCCCTTGCAGCATaGGTCCGACGCCAACGGGCCTCCTCCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: KTAAPLLTPLAA*VRRQRASSSSS
Trigger: GGAGGAAGAGGAGGAGGCCCGTTGGCGTCGGACCAATGCTGCAAGGGGTGTGAGGAGAGGAGCCGCTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp CCCGACGCCATGGGGTTGCCGCCTGGATTCATGGGGTaGTTGGCATTGGCCATAGGGTTCCCAAGGACCTGG +
Preference number: 6 (lower is better)
Translates to: PDAMGLPPGFMG*LALAIGFPRTW
Trigger: CCAGGTCCTTGGGAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CAA 90 bp TCAGTGATCTGCAAACCACCAGTGTTCCACACGCCGGTCAGCAGCTaGCGGCCCCTCCACCTCACTCCAGCTCCATCCTGCTTTCGGGGT +
Preference number: 6 (lower is better)
Translates to: SVICKPPVFHTPVSS*RPLHLTPAPSCFRG
Trigger: ACCCCGAAAGCAGGATGGAGCTGGAGTGAGGTGGAGGGGCCGCAAGCTGCTGACCGGCGTGTGGAACACTGGTGGTTTGCAGATCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp AGCACACACAGCCAGCAGTCTGTAGCCGAGGTCCAGGTCAAAGCCTaGCTGGGCTGCCACCCGACTGACCACCGTCAAACAGCCCATCAG +
Preference number: 6 (lower is better)
Translates to: STHSQQSVAEVQVKA*LGCHPTDHRQTAHQ
Trigger: CTGATGGGCTGTTTGACGGTGGTCAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGACCTCGGCTACAGACTGCTGGCTGTGTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 90 bp GTCATGCCCGACGCCATGGGGTTGCCGCCTGGATTCATGGGGTTGTaGGCATTGGCCATAGGGTTCCCAAGGACCTGGCTCTGGGATGTG +
Preference number: 6 (lower is better)
Translates to: VMPDAMGLPPGFMGL*ALAIGFPRTWLWDV
Trigger: CACATCCCAGAGCCAGGTCCTTGGGAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CAA 90 bp GTGGTCATGCCCGACGCCATGGGGTTGCCGCCTGGATTCATGGGGTaGTTGGCATTGGCCATAGGGTTCCCAAGGACCTGGCTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: VVMPDAMGLPPGFMG*LALAIGFPRTWLWD
Trigger: ATCCCAGAGCCAGGTCCTTGGGAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CAA 90 bp GAGTTGAGGCCTGGGTTGCTGGTGGTCATGCCCGACGCCATGGGGTaGCCGCCTGGATTCATGGGGTTGTTGGCATTGGCCATAGGGTTC +
Preference number: 6 (lower is better)
Translates to: ELRPGLLVVMPDAMG*PPGFMGLLALAIGF
Trigger: GAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCACCAGCAACCCAGGCCTCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS TCA 72 bp GGCTCTGGGATGTGTTGGTTACTCCCCAAACCGTGGTaGCCACGGAAAGGGAGCCGGGAGGCTGGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: GSGMCWLLPKPW*PRKGSREAGWC
Trigger: ACACCAACCAGCCTCCCGGCTCCCTTTCCGTGGTCACCACGGTTTGGGGAGTAACCAACACATCCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS GCA 72 bp TCTGTAGCCGAGGTCCAGGTCAAAGCCTTGCTGGGCTaGCACCCGACTGACCACCGTCAAACAGCCCATCAG +
Preference number: 6 (lower is better)
Translates to: SVAEVQVKALLG*HPTDHRQTAHQ
Trigger: CTGATGGGCTGTTTGACGGTGGTCAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGACCTCGGCTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS GCA 72 bp GTCGTGGGGAGCAACCAGGGCTTCACGAGGGGCATCTaGAGAGCCACGTCCCTACGTCTTCTGCAGGTAAAC +
Preference number: 6 (lower is better)
Translates to: VVGSNQGFTRGI*RATSLRLLQVN
Trigger: GTTTACCTGCAGAAGACGTAGGGACGTGGCTCTGCAGATGCCCCTCGTGAAGCCCTGGTTGCTCCCCACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp GCTGGTGGTCATGCCCGACGCCATGGGGTTGCCGCCTaGATTCATGGGGTTGTTGGCATTGGCCATAGGGTT +
Preference number: 6 (lower is better)
Translates to: AGGHARRHGVAA*IHGVVGIGHRV
Trigger: AACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CCA 72 bp GGCTTGATGTCAGGCGGGAAGGGTGGTTTGACGTCTTaGCTGGGGGACAGGTATGGAGGGATGCTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: GLMSGGKGGLTS*LGDRYGGMLLP
Trigger: TGGGAGCAGCATCCCTCCATACCTGTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGACATCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp AACTGCAGCTCCAGGTCAGACCTCCACATCAGCGTCTaGTGGACCGTGGGCCGCAGGTGGAACACATGGTTG +
Preference number: 6 (lower is better)
Translates to: NCSSRSDLHISV*WTVGRRWNTWL
Trigger: CAACCATGTGTTCCACCTGCGGCCCACGGTCCACCAGACGCTGATGTGGAGGTCTGACCTGGAGCTGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp GAGCTGCCAGCGTGTGGCATAGTTTCCTGCATGGGGTaGCTGAGGGGTTTCTCGAGGGCGGCCATGTTGTTG +
Preference number: 6 (lower is better)
Translates to: ELPACGIVSCMG*LRGFSRAAMLL
Trigger: CAACAACATGGCCGCCCTCGAGAAACCCCTCAGCCACCCCATGCAGGAAACTATGCCACACGCTGGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp GGGGACGTTCAGAAATCACCCACCCCTCGCTGTCCTTaGGGCAAACACACGCAGGGTCAGAGTGATCCCGGT +
Preference number: 6 (lower is better)
Translates to: GDVQKSPTPRCP*GKHTQGQSDPG
Trigger: ACCGGGATCACTCTGACCCTGCGTGTGTTTGCCCCAAGGACAGCGAGGGGTGGGTGATTTCTGAACGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp CTCAGTGAAAAACAGCGGCTCCTCTCCTCACACCCCTaGCAGCATTGGTCCGACGCCAACGGGCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LSEKQRLLSSHP*QHWSDANGPPP
Trigger: AGGAGGAGGCCCGTTGGCGTCGGACCAATGCTGCAAGGGGTGTGAGGAGAGGAGCCGCTGTTTTTCACTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp AGCCAGCAGTCTGTAGCCGAGGTCCAGGTCAAAGCCTaGCTGGGCTGCCACCCGACTGACCACCGTCAAACA +
Preference number: 6 (lower is better)
Translates to: SQQSVAEVQVKA*LGCHPTDHRQT
Trigger: TGTTTGACGGTGGTCAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGACCTCGGCTACAGACTGCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 72 bp GACGCCATGGGGTTGCCGCCTGGATTCATGGGGTTGTaGGCATTGGCCATAGGGTTCCCAAGGACCTGGCTC +
Preference number: 6 (lower is better)
Translates to: DAMGLPPGFMGL*ALAIGFPRTWL
Trigger: GAGCCAGGTCCTTGGGAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CAA 90 bp GTATGGCAGCTCAGTGAAAAACAGCGGCTCCTCTCCTCACACCCCTaGCAGCATTGGTCCGACGCCAACGGGCCTCCTCCTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: VWQLSEKQRLLSSHP*QHWSDANGPPPLPP
Trigger: AGGAGGAAGAGGAGGAGGCCCGTTGGCGTCGGACCAATGCTGCAAGGGGTGTGAGGAGAGGAGCCGCTGTTTTTCACTGAGCTGCCATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp AAGGCCCGTGGGTCTCCGCACCAGTCCAGCAGCTCCGTGGCGGCATaGTGGAAGTTGGCAGGATTCTGTAAGTGCTGCTTGATGCACTGC +
Preference number: 6 (lower is better)
Translates to: KARGSPHQSSSSVAA*WKLAGFCKCCLMHC
Trigger: GCAGTGCATCAAGCAGCACTTACAGAATCCTGCCAACTTCCACAATGCCGCCACGGAGCTGCTGGACTGGTGCGGAGACCCACGGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 90 bp CTCATGGTCTTGAACCGCTTGGAGGGGATGCCATCAGGGTCGTCCTaGATGTGTAAGTCCGACTTGATGGGCACCGGCCGCCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: LMVLNRLEGMPSGSS*MCKSDLMGTGRQLH
Trigger: GTGCAGCTGGCGGCCGGTGCCCATCAAGTCGGACTTACACATCAAGGACGACCCTGATGGCATCCCCTCCAAGCGGTTCAAGACCATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp GTGGTTGGCTGGGGGTGGTGGCAGAGCGCTCATATTTaGCTTGATGTCAGGCGGGAAGGGTGGTTTGACGTC +
Preference number: 6 (lower is better)
Translates to: VVGWGWWQSAHI*LDVRREGWFDV
Trigger: GACGTCAAACCACCCTTCCCGCCTGACATCAAGCCAAATATGAGCGCTCTGCCACCACCCCCAGCCAACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp TTGAACCGCTTGGAGGGGATGCCATCAGGGTCGTCCTaGATGTGTAAGTCCGACTTGATGGGCACCGGCCGC +
Preference number: 6 (lower is better)
Translates to: LNRLEGMPSGSS*MCKSDLMGTGR
Trigger: GCGGCCGGTGCCCATCAAGTCGGACTTACACATCAAGGACGACCCTGATGGCATCCCCTCCAAGCGGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp GGCAGAGCGCTCATATTTGGCTTGATGTCAGGCGGGAAGGGTGGTTaGACGTCTTGGCTGGGGGACAGGTATGGAGGGATGCTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: GRALIFGLMSGGKGG*TSWLGDRYGGMLLP
Trigger: TGGGAGCAGCATCCCTCCATACCTGTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGACATCAAGCCAAATATGAGCGCTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp TCATTGTGGTTGGCTGGGGGTGGTGGCAGAGCGCTCATATTTGGCTaGATGTCAGGCGGGAAGGGTGGTTTGACGTCTTGGCTGGGGGAC +
Preference number: 6 (lower is better)
Translates to: SLWLAGGGGRALIFG*MSGGKGGLTSWLGD
Trigger: GTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGACATCAAGCCAAATATGAGCGCTCTGCCACCACCCCCAGCCAACCACAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp TCAAGCAGCCCTAGGAGGCAGGGTGACTGGCTCGAGGTCTTTCAGTaGGGAAACAGCAGAACCAGGTCTCAAACCCAGGAGCACCTGACC +
Preference number: 6 (lower is better)
Translates to: SSSPRRQGDWLEVFQ*GNSRTRSQTQEHLT
Trigger: GGTCAGGTGCTCCTGGGTTTGAGACCTGGTTCTGCTGTTTCCCAACTGAAAGACCTCGAGCCAGTCACCCTGCCTCCTAGGGCTGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp AGCCAAGACAAGAGTCACTACAGTAAGAGGAACTGCTaGTTGCTGAGTGGCGGCACATGCCAGCCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SQDKSHYSKRNC*LLSGGTCQPRA
Trigger: GGCCCTGGGCTGGCATGTGCCGCCACTCAGCAAGCAGCAGTTCCTCTTACTGTAGTGACTCTTGTCTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp CATCCGAGATTGCCTCCTTTGGCGTGGGCTAACAGATaGACCCCCAGCACAGCCAGTGGGACACTGGGATTT +
Preference number: 6 (lower is better)
Translates to: HPRLPPLAWANR*TPSTASGTLGF
Trigger: AAATCCCAGTGTCCCACTGGCTGTGCTGGGGGTGCATCTGTTAGCCCACGCCAAAGGAGGCAATCTCGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp GTGTTCAGTTCTGGGCCATCGACAACCTGCCACCTGTaGAGGAGGTGGGAGAGCCAGGTTGGTGAAGGAACA +
Preference number: 6 (lower is better)
Translates to: VFSSGPSTTCHL*RRWESQVGEGT
Trigger: TGTTCCTTCACCAACCTGGCTCTCCCACCTCCTGCACAGGTGGCAGGTTGTCGATGGCCCAGAACTGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp GGCCCGGGCTGGTTCATGAATTGGCTGTTATACGCCTaGGTGGGACCCATCTGGAAAGAGGAACAGACCGGT +
Preference number: 6 (lower is better)
Translates to: GPGWFMNWLLYA*VGPIWKEEQTG
Trigger: ACCGGTCTGTTCCTCTTTCCAGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp CTGACATTCTGGCCACCGAACTTCGCCCTGAACACATaGGGACGTTCAGAAATCACCCACCCCTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LTFWPPNFALNT*GRSEITHPSLS
Trigger: GGACAGCGAGGGGTGGGTGATTTCTGAACGTCCCCATGTGTTCAGGGCGAAGTTCGGTGGCCAGAATGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp CAGGAGGACAACAAGGCGGCAGACTTCGGGGTGAACTaGTCTCGGTTTGCAGCACACACAGCCAGCAGTCTG +
Preference number: 6 (lower is better)
Translates to: QEDNKAADFGVN*SRFAAHTASSL
Trigger: CAGACTGCTGGCTGTGTGTGCTGCAAACCGAGACAAGTTCACCCCGAAGTCTGCCGCCTTGTTGTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 72 bp ATGGGGTTGCCGCCTGGATTCATGGGGTTGTTGGCATaGGCCATAGGGTTCCCAAGGACCTGGCTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: MGLPPGFMGLLA*AIGFPRTWLWD
Trigger: ATCCCAGAGCCAGGTCCTTGGGAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334512.10
ENST00000472035.5
ENST00000478357.1
CDS CAA 72 bp GGAATTCTGCTGAAGCCTCATCCGAGATTGCCTCCTTaGGCGTGGGCTAACAGATGCACCCCCAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: GILLKPHPRLPP*AWANRCTPSTA
Trigger: GGCTGTGCTGGGGGTGCATCTGTTAGCCCACGCCAAAGGAGGCAATCTCGGATGAGGCTTCAGCAGAATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 90 bp TTATACGCCTGGGTGGGACCCATCGGTCCATACTGGTTTATATCCTaGTTCTGTGTCTCCTGCAGGGCTGCCACAGTGGCCGTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LYAWVGPIGPYWFIS*FCVSCRAATVAVAV
Trigger: CACAGCCACGGCCACTGTGGCAGCCCTGCAGGAGACACAGAACAAGGATATAAACCAGTATGGACCGATGGGTCCCACCCAGGCGTATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp AGGATGCAGAGTGTGGAGGGATGGCCCCGACCGGGTGGCCCTCAGTaGTTCTCAAATAGAGACAGGAGGTCATCGTTACTATTGCTCGGC +
Preference number: 6 (lower is better)
Translates to: RMQSVEGWPRPGGPQ*FSNRDRRSSLLLLG
Trigger: GCCGAGCAATAGTAACGATGACCTCCTGTCTCTATTTGAGAACAACTGAGGGCCACCCGGTCGGGGCCATCCCTCCACACTCTGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 72 bp AGGTGCAGGGGTGACACCAATGACCAGGAATTCTGCTaGAGCCTCATCCGAGATTGCCTCCTTTGGCGTGGG +
Preference number: 6 (lower is better)
Translates to: RCRGDTNDQEFC*SLIRDCLLWRG
Trigger: CCCACGCCAAAGGAGGCAATCTCGGATGAGGCTTCAGCAGAATTCCTGGTCATTGGTGTCACCCCTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS TCA 72 bp CGTTCAATGTTGCCAACGTCACATAGCCAGGTCACCTaGACAACGGGATGGGGCCCGCCTCTCCTCATTTGC +
Preference number: 6 (lower is better)
Translates to: RSMLPTSHSQVT*TTGWGPPLLIC
Trigger: GCAAATGAGGAGAGGCGGGCCCCATCCCGTTGTTCAGGTGACCTGGCTATGTGACGTTGGCAACATTGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp ATGTCCCTCCAGGGTTCCCGTGGGGGAAGTCAAAGTTaGCATGGCCTTGGTAGTTGTTGCCTTGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: MSLQGSRGGSQS*HGLGSCCLGCC
Trigger: ACAGCAGCCAAGGCAACAACTACCAAGGCCATGGCAACTTTGACTTCCCCCACGGGAACCCTGGAGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp GAGCCCCACTGTGATGTAATGGAGGCCCTGACTGGCTaGTGGGGTGTGGTACGTGCAAACCTTGTTGTATGG +
Preference number: 6 (lower is better)
Translates to: EPHCDVMEALTG*WGVVRANLVVW
Trigger: CCATACAACAAGGTTTGCACGTACCACACCCCAGCAGCCAGTCAGGGCCTCCATTACATCACAGTGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp CTGAGCCAAGACAAGAGTCACTACAGTAAGAGGAACTaGTGCTTGCTGAGTGGCGGCACATGCCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LSQDKSHYSKRN*CLLSGGTCQPR
Trigger: CCTGGGCTGGCATGTGCCGCCACTCAGCAAGCAGCAGTTCCTCTTACTGTAGTGACTCTTGTCTTGGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp CCCAAATCTTCCCCAACACCTTGGCTGAGCTGGCTGTaGAGCCCAAGAGGCAGTGCCACTTCCTATACAGTG +
Preference number: 6 (lower is better)
Translates to: PKSSPTPWLSWL*SPRGSATSYTV
Trigger: CACTGTATAGGAAGTGGCACTGCCTCTTGGGCTGCACAGCCAGCTCAGCCAAGGTGTTGGGGAAGATTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp GGCACCCACCACAGGAGGTATAGAAGACGTAGCTGGTaGCTACCTGCCCACCAAGCTAGAGAAGAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: GTHHRRYRRRSW*LPAHQAREESP
Trigger: AGGACTCTCTTCTCTAGCTTGGTGGGCAGGTAGGCACCAGCTACGTCTTCTATACCTCCTGTGGTGGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp TGGGTACTGGCCTGGCTGGGTGGGGAACTGGCTGTTTaGTCCATATTGCTGGTTTCCATAGTTGGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: WVLAWLGGELAV*SILLVSIVGLS
Trigger: GGAGAGCCCAACTATGGAAACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGCCAGGCCAGTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp AGCGCTCATATTTGGCTTGATGTCAGGCGGGAAGGGTaGTTTGACGTCTTGGCTGGGGGACAGGTATGGAGG +
Preference number: 6 (lower is better)
Translates to: SAHIWLDVRREG*FDVLAGGQVWR
Trigger: CCTCCATACCTGTCCCCCAGCCAAGACGTCAAACCACCCTTCCCGCCTGACATCAAGCCAAATATGAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp CCCCACTGTGATGTAATGGAGGCCCTGACTGGCTGCTaGGGTGTGGTACGTGCAAACCTTGTTGTATGGAGG +
Preference number: 6 (lower is better)
Translates to: PHCDVMEALTGC*GVVRANLVVWR
Trigger: CCTCCATACAACAAGGTTTGCACGTACCACACCCCAGCAGCCAGTCAGGGCCTCCATTACATCACAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp CTAGGAGGCAGGGTGACTGGCTCGAGGTCTTTCAGTTaGGAAACAGCAGAACCAGGTCTCAAACCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LGGRVTGSRSFS*ETAEPGLKPRS
Trigger: GCTCCTGGGTTTGAGACCTGGTTCTGCTGTTTCCCAACTGAAAGACCTCGAGCCAGTCACCCTGCCTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp TCAAGTCCCTCAAGCAGCCCTAGGAGGCAGGGTGACTaGCTCGAGGTCTTTCAGTTGGGAAACAGCAGAACC +
Preference number: 6 (lower is better)
Translates to: SSPSSSPRRQGD*LEVFQLGNSRT
Trigger: GGTTCTGCTGTTTCCCAACTGAAAGACCTCGAGCCAGTCACCCTGCCTCCTAGGGCTGCTTGAGGGACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp TGGGTACTGGCCTGGCTGGGTGGGGAACTGGCTGTTTaGTCCATATTGCTGGTTTCCATAGTTGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: WVLAWLGGELAV*SILLVSIVGLW
Trigger: CCACAGCCCAACTATGGAAACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGCCAGGCCAGTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp CACCAGTCCAGCAGCTCCGTGGCGGCATTGTGGAAGTaGGCAGGATTCTGTAAGTGCTGCTTGATGCACTGC +
Preference number: 6 (lower is better)
Translates to: HQSSSSVAALWK*AGFCKCCLMHC
Trigger: GCAGTGCATCAAGCAGCACTTACAGAATCCTGCCAACTTCCACAATGCCGCCACGGAGCTGCTGGACTGGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 72 bp TGGGTGGGACCCATCGGTCCATACTGGTTTATATCCTaGTTCTGTGTCTCCTGCAGGGCTGCCACAGTGGCC +
Preference number: 6 (lower is better)
Translates to: WVGPIGPYWFIS*FCVSCRAATVA
Trigger: GGCCACTGTGGCAGCCCTGCAGGAGACACAGAACAAGGATATAAACCAGTATGGACCGATGGGTCCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp CACAGGAACCGGCCTGGGAGGCCTGTTGACATTCCCTaGGCTGTAGTTACTGTAGCTGCTTCCCGAGAACGT +
Preference number: 6 (lower is better)
Translates to: HRNRPGRPVDIP*AVVTVAASRER
Trigger: ACGTTCTCGGGAAGCAGCTACAGTAACTACAGCCAAGGGAATGTCAACAGGCCTCCCAGGCCGGTTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp CAAGACAAGAGTCACTACAGTAAGAGGAACTGCTGCTaGCTGAGTGGCGGCACATGCCAGCCCAGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: QDKSHYSKRNCC*LSGGTCQPRAK
Trigger: CTTGGCCCTGGGCTGGCATGTGCCGCCACTCAGCAAGCAGCAGTTCCTCTTACTGTAGTGACTCTTGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp CCTCTCTCTCCCCTCCTGAACTCAGAATACCTCCACTaGTTGCCAAGCCTCCCCGCCCATCCTAAGGTGGAT +
Preference number: 6 (lower is better)
Translates to: PLSPLLNSEYLH*LPSLPAHPKVD
Trigger: ATCCACCTTAGGATGGGCGGGGAGGCTTGGCAACAAGTGGAGGTATTCTGAGTTCAGGAGGGGAGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 90 bp CCCATCTGGAAAGAGGAACAGACCGGTCCATACTGGTTTATATCCTaGTTCTGTGTCTCCTGCAGGGCTGCCACAGTGGCCGTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PIWKEEQTGPYWFIS*FCVSCRAATVAVAV
Trigger: CACAGCCACGGCCACTGTGGCAGCCCTGCAGGAGACACAGAACAAGGATATAAACCAGTATGGACCGGTCTGTTCCTCTTTCCAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 90 bp GGCCATCGACAACCTGCCACCTGTGCAGGAGGTGGGAGAGCCAGGTaGGTGAAGGAACAAGACAACTTCTCCCGGGACAGACAATTTAGA +
Preference number: 6 (lower is better)
Translates to: GHRQPATCAGGGRAR*VKEQDNFSRDRQFR
Trigger: TCTAAATTGTCTGTCCCGGGAGAAGTTGTCTTGTTCCTTCACCAACCTGGCTCTCCCACCTCCTGCACAGGTGGCAGGTTGTCGATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp ACCTTGGCTGAGCTGGCTGTGCAGCCCAAGAGGCAGTaGCACTTCCTATACAGTGACCAAGTGTGGATGGAA +
Preference number: 6 (lower is better)
Translates to: TLAELAVQPKRQ*HFLYSDQVWME
Trigger: TTCCATCCACACTTGGTCACTGTATAGGAAGTGGCACTGCCTCTTGGGCTGCACAGCCAGCTCAGCCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp AGGGTTCCCGTGGGGGAAGTCAAAGTTGCCATGGCCTaGGTAGTTGTTGCCTTGGCTGCTGTAGTCGTTGGA +
Preference number: 6 (lower is better)
Translates to: RVPVGEVKVAMA*VVVALAAVVVG
Trigger: TCCAACGACTACAGCAGCCAAGGCAACAACTACCAAGGCCATGGCAACTTTGACTTCCCCCACGGGAACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 72 bp AGTGTGGAGGGATGGCCCCGACCGGGTGGCCCTCAGTaGTTCTCAAATAGAGACAGGAGGTCATCGTTACTA +
Preference number: 6 (lower is better)
Translates to: SVEGWPRPGGPQ*FSNRDRRSSLL
Trigger: TAGTAACGATGACCTCCTGTCTCTATTTGAGAACAACTGAGGGCCACCCGGTCGGGGCCATCCCTCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp TGGGTACTGGCCTGGCTGGGTGGGGAACTGGCTGTTTGGTCCATATaGCTGGTTTCCATAGTTGGGCTCTCCAGGGTATGGCCTCTTTAT +
Preference number: 6 (lower is better)
Translates to: WVLAWLGGELAVWSI*LVSIVGLSRVWPLY
Trigger: ATAAAGAGGCCATACCCTGGAGAGCCCAACTATGGAAACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGCCAGGCCAGTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CAA 90 bp ACATTGGGCATGATCATCTGGCTGGGACTCATGGTCTTGAACCGCTaGGAGGGGATGCCATCAGGGTCGTCCTTGATGTGTAAGTCCGAC +
Preference number: 6 (lower is better)
Translates to: TLGMIIWLGLMVLNR*EGMPSGSSLMCKSD
Trigger: GTCGGACTTACACATCAAGGACGACCCTGATGGCATCCCCTCCAAGCGGTTCAAGACCATGAGTCCCAGCCAGATGATCATGCCCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp AGTGTCTCTCTTGCCCAGAGGTCCTGTTGGTGGCTGTaGCCCAGTGCCTGGGAAAATACCCTTAATACTTGC +
Preference number: 6 (lower is better)
Translates to: SVSLAQRSCWWL*PSAWENTLNTC
Trigger: GCAAGTATTAAGGGTATTTTCCCAGGCACTGGGGCACAGCCACCAACAGGACCTCTGGGCAAGAGAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp CATCTGAGTGTCTCTCTTGCCCAGAGGTCCTGTTGGTaGCTGTGCCCCAGTGCCTGGGAAAATACCCTTAAT +
Preference number: 6 (lower is better)
Translates to: HLSVSLAQRSCW*LCPSAWENTLN
Trigger: ATTAAGGGTATTTTCCCAGGCACTGGGGCACAGCCACCAACAGGACCTCTGGGCAAGAGAGACACTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp ATGATCATCTGGCTGGGACTCATGGTCTTGAACCGCTaGGAGGGGATGCCATCAGGGTCGTCCTTGATGTGT +
Preference number: 6 (lower is better)
Translates to: MIIWLGLMVLNR*EGMPSGSSLMC
Trigger: ACACATCAAGGACGACCCTGATGGCATCCCCTCCAAGCGGTTCAAGACCATGAGTCCCAGCCAGATGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 72 bp ATTCTGGCCGTTTCACTAGGTTCTACCCGAGAGCCATaGACGTTGTCCAGCCTCAGTGATCTGCAAACCACC +
Preference number: 6 (lower is better)
Translates to: ILAVSLGSTREP*TLSSLSDLQTT
Trigger: GGTGGTTTGCAGATCACTGAGGCTGGACAACGTTCATGGCTCTCGGGTAGAACCTAGTGAAACGGCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS TCA 72 bp TACCCAGATGGGCCAGCTGCTGCCAGCATCATTTTCTaGGGATTTACTTGTGACACACCCTCCAGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: YPDGPAAASIIF*GFTCDTPSRKP
Trigger: AGGCTTCCTGGAGGGTGTGTCACAAGTAAATCCTCAGAAAATGATGCTGGCAGCAGCTGGCCCATCTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS TCA 72 bp CCCTGTCTGGAAAATCAGGTGACCCTCACGGCCACATaGCATCCTGTGAGTCAGTGGTTTCTTCTTCCCCAT +
Preference number: 6 (lower is better)
Translates to: PCLENQVTLTAT*HPVSQWFLLPH
Trigger: ATGGGGAAGAAGAAACCACTGACTCACAGGATGTCATGTGGCCGTGAGGGTCACCTGATTTTCCAGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp TCCACTTGTTGCCAAGCCTCCCCGCCCATCCTAAGGTaGATACTGAGGGGAAATGTGCAGATCTTCAAGGAA +
Preference number: 6 (lower is better)
Translates to: STCCQASPPILR*ILRGNVQIFKE
Trigger: TTCCTTGAAGATCTGCACATTTCCCCTCAGTATCCACCTTAGGATGGGCGGGGAGGCTTGGCAACAAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp GCCCAGAGGTCCTGTTGGTGGCTGTGCCCCAGTGCCTaGGAAAATACCCTTAATACTTGCTCAACAAACGAA +
Preference number: 6 (lower is better)
Translates to: AQRSCWWLCPSA*ENTLNTCSTNE
Trigger: TTCGTTTGTTGAGCAAGTATTAAGGGTATTTTCCCAGGCACTGGGGCACAGCCACCAACAGGACCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp AAAGAGGAACAGACCGGTCCATACTGGTTTATATCCTaGTTCTGTGTCTCCTGCAGGGCTGCCACAGTGGCC +
Preference number: 6 (lower is better)
Translates to: KEEQTGPYWFIS*FCVSCRAATVA
Trigger: GGCCACTGTGGCAGCCCTGCAGGAGACACAGAACAAGGATATAAACCAGTATGGACCGGTCTGTTCCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp AAGTGCTGCTTGATGCACTGCAGTCGGTCATTGGTCTaGTGGATGTGCCTGTCCATAGAATTCATTCTGGCC +
Preference number: 6 (lower is better)
Translates to: KCCLMHCSRSLV*WMCLSIEFILA
Trigger: GGCCAGAATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGACTGCAGTGCATCAAGCAGCACTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 90 bp TTGGCAGGATTCTGTAAGTGCTGCTTGATGCACTGCAGTCGGTCATaGGTCTGCTGGATGTGCCTGTCCATAGAATTCATTCTGGCCGTT +
Preference number: 6 (lower is better)
Translates to: LAGFCKCCLMHCSRS*VCWMCLSIEFILAV
Trigger: AACGGCCAGAATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGACTGCAGTGCATCAAGCAGCACTTACAGAATCCTGCCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 90 bp ATAGACTGGAAGCATTTTGTCTCAGCTCTCTTTCTTGGAGAGGAGTaGGGGAAGCTCTCATGTGGGCAGGAGGAACTAAACCCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: IDWKHFVSALFLGEE*GKLSCGQEELNPGH
Trigger: GTGACCTGGGTTTAGTTCCTCCTGCCCACATGAGAGCTTCCCCAACTCCTCTCCAAGAAAGAGAGCTGAGACAAAATGCTTCCAGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp AAGTGTCAGTGTGGAAGAATCTACAACTCACGTTGTTaGAACATGGTGGCTGCTCTGGGTGACAGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: KCQCGRIYNSRC*NMVAALGDSEA
Trigger: TGCCTCACTGTCACCCAGAGCAGCCACCATGTTGCAACAACGTGAGTTGTAGATTCTTCCACACTGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp GGCAGTGCCACTTCCTATACAGTGACCAAGTGTGGATaGAAACAAGAGCTAAGAAACACGCTGTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: GSATSYTVTKCG*KQELRNTLSAF
Trigger: GAAGGCAGACAGCGTGTTTCTTAGCTCTTGTTTCCATCCACACTTGGTCACTGTATAGGAAGTGGCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp CCCAACCCCTGTCCTAAGGCTCCAACAATTCAAATATaGTATGAACAAGCCATGGCAAGGGGAAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: PNPCPKAPTIQI*YEQAMARGRKA
Trigger: GGCCTTCCTTCCCCTTGCCATGGCTTGTTCATACAATATTTGAATTGTTGGAGCCTTAGGACAGGGGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS GCA 72 bp TTGATGCACTGCAGTCGGTCATTGGTCTGCTGGATGTaGCTGTCCATAGAATTCATTCTGGCCGTTTCACTA +
Preference number: 6 (lower is better)
Translates to: LMHCSRSLVCWM*LSIEFILAVSL
Trigger: TAGTGAAACGGCCAGAATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGACTGCAGTGCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CCA 72 bp ATGAATTGGCTGTTATACGCCTGGGTGGGACCCATCTaGAAAGAGGAACAGACCGGTCCATACTGGTTTATA +
Preference number: 6 (lower is better)
Translates to: MNWLLYAWVGPI*KEEQTGPYWFI
Trigger: TATAAACCAGTATGGACCGGTCTGTTCCTCTTTCCAGATGGGTCCCACCCAGGCGTATAACAGCCAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp TATAGACTGGAAGCATTTTGTCTCAGCTCTCTTTCTTaGAGAGGAGTTGGGGAAGCTCTCATGTGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: YRLEAFCLSSLS*RGVGEALMWAG
Trigger: TCCTGCCCACATGAGAGCTTCCCCAACTCCTCTCCAAGAAAGAGAGCTGAGACAAAATGCTTCCAGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp AAGAGGCAGTGCCACTTCCTATACAGTGACCAAGTGTaGATGGAAACAAGAGCTAAGAAACACGCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: KRQCHFLYSDQV*METRAKKHAVC
Trigger: GCAGACAGCGTGTTTCTTAGCTCTTGTTTCCATCCACACTTGGTCACTGTATAGGAAGTGGCACTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp AAGCATTTTGTCTCAGCTCTCTTTCTTGGAGAGGAGTaGGGGAAGCTCTCATGTGGGCAGGAGGAACTAAAC +
Preference number: 6 (lower is better)
Translates to: KHFVSALFLGEE*GKLSCGQEELN
Trigger: GTTTAGTTCCTCCTGCCCACATGAGAGCTTCCCCAACTCCTCTCCAAGAAAGAGAGCTGAGACAAAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CCA 72 bp AGGCTCCAACAATTCAAATATTGTATGAACAAGCCATaGCAAGGGGAAGGAAGGCCAGTCTTCCAGACAGGA +
Preference number: 6 (lower is better)
Translates to: RLQQFKYCMNKP*QGEGRPVFQTG
Trigger: TCCTGTCTGGAAGACTGGCCTTCCTTCCCCTTGCCATGGCTTGTTCATACAATATTTGAATTGTTGGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp TTCTGTAAGTGCTGCTTGATGCACTGCAGTCGGTCATaGGTCTGCTGGATGTGCCTGTCCATAGAATTCATT +
Preference number: 6 (lower is better)
Translates to: FCKCCLMHCSRS*VCWMCLSIEFI
Trigger: AATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGACTGCAGTGCATCAAGCAGCACTTACAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334512.10
ENST00000611351.1
CDS CAA 90 bp CCCTTGGCTGTAGTTACTGTAGCTGCTTCCCGAGAACGTGTTATTTaGTCCATTAAACTGTTCTGGCTTGTAATACTGCCCCATGTTGAC +
Preference number: 6 (lower is better)
Translates to: PLAVVTVAASRERVI*SIKLFWLVILPHVD
Trigger: GTCAACATGGGGCAGTATTACAAGCCAGAACAGTTTAATGGACAAAATAACACGTTCTCGGGAAGCAGCTACAGTAACTACAGCCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS GCA 72 bp CTGCCTTCTCTGACTCATATTGAGTTCTGTGCAGTCTaGTATGCTTCATTCCCTGGTGAGTCTCTGCTAAAA +
Preference number: 6 (lower is better)
Translates to: LPSLTHIEFCAV*YASFPGESLLK
Trigger: TTTTAGCAGAGACTCACCAGGGAATGAAGCATAGCAGACTGCACAGAACTCAATATGAGTCAGAGAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1
CDS CAA 72 bp GTAGTTACTGTAGCTGCTTCCCGAGAACGTGTTATTTaGTCCATTAAACTGTTCTGGCTTGTAATACTGCCC +
Preference number: 6 (lower is better)
Translates to: VVTVAASRERVI*SIKLFWLVILP
Trigger: GGGCAGTATTACAAGCCAGAACAGTTTAATGGACAAAATAACACGTTCTCGGGAAGCAGCTACAGTAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334512.10
CDS CCA 72 bp GATGGACTTAGGGATAAATGTCAGAAAGTGTCAGTGTaGAAGAATCTACAACTCACGTTGTTGCAACATGGT +
Preference number: 6 (lower is better)
Translates to: DGLRDKCQKVSV*KNLQLTLLQHG
Trigger: ACCATGTTGCAACAACGTGAGTTGTAGATTCTTCCACACTGACACTTTCTGACATTTATCCCTAAGTCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478357.1