RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMAT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000165061

Ensembl transcript IDs: ENST00000297737.11, ENST00000315769.11, ENST00000518242.5, ENST00000519406.5, ENST00000519806.1, ENST00000522623.1, ENST00000523188.5, ENST00000523542.5, ENST00000523823.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAACTGGCAGACCTaGTCCCTCCTGAGCGGGCCCTGCTCAAGGGAATGGTGCCAGATT +
Preference number: 1 (lower is better)
Translates to: ARGASSLCRHRNWQT*SLLSGPCSREWCQI
Trigger: AATCTGGCACCATTCCCTTGAGCAGGGCCCGCTCAGGAGGGACCAGGTCTGCCAGTTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 90 bp CCTATGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTaGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTC +
Preference number: 1 (lower is better)
Translates to: PMVVRDTGQPQPDPS*SMQGIVSRSSTSHF
Trigger: GAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 90 bp TTCCCATCCAACCCCCTTTCCTCTTGTAGAGTAGGGTGTGGCTCGTaGGGCTTCGTCTCTCTGCAGGCACAGAAACTGGCAGACCTGGTC +
Preference number: 1 (lower is better)
Translates to: FPSNPLSSCRVGCGS*GFVSLQAQKLADLV
Trigger: GACCAGGTCTGCCAGTTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGAGGAAAGGGGGTTGGATGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR GCA 90 bp TGCAGGCACAGAAACTGGCAGACCTGGTCCCTCCTGAGCGGGCCCTaGTCAAGGGAATGGTGCCAGATTTTGAACACAGGTAAACAGGCT +
Preference number: 1 (lower is better)
Translates to: CRHRNWQTWSLLSGP*SREWCQILNTGKQA
Trigger: AGCCTGTTTACCTGTGTTCAAAATCTGGCACCATTCCCTTGAGCAGGGCCCGCTCAGGAGGGACCAGGTCTGCCAGTTTCTGTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 90 bp TTCCATTTTCTGACCGGAGCCTCTTGGCAGGACACCCTCCATCCCTaGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTC +
Preference number: 1 (lower is better)
Translates to: FHFLTGASWQDTLHP*GEACNTVGLCLHVF
Trigger: GAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAGAAAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
3UTR TCA 90 bp CGTGGATTTTGCCTTGATAATGGGAATCGGCCACCACCGCTGAAGTaGATGACATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCACCA +
Preference number: 1 (lower is better)
Translates to: RGFCLDNGNRPPPLK*MTCCRVCSTCSYPP
Trigger: TGGTGGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGTGGCCGATTCCCATTATCAAGGCAAAATCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
3UTR TCA 90 bp CATAACAACACTGTGCATTTCTGTGTCATTTTGTTTATTGCTCACTaGGTTGTTGCCACCTCAGCTCTTGGTGGAAAACAGTGGGTGTCC +
Preference number: 1 (lower is better)
Translates to: HNNTVHFCVILFIAH*VVATSALGGKQWVS
Trigger: GGACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCAATAAACAAAATGACACAGAAATGCACAGTGTTGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 90 bp ACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTTaGCTCAGCAGTAGGACTTCAGTGAGAAACAGAAGAAATAGGGGA +
Preference number: 1 (lower is better)
Translates to: TVFFIGHALSRVTES*LSSRTSVRNRRNRG
Trigger: TCCCCTATTTCTTCTGTTTCTCACTGAAGTCCTACTGCTGAGCCAAGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 90 bp TCCCTTCGTCTTCATTGTTCAGATGGTAAACCTGGCTCCTGTGCTTaGAGAACGGAGAAAACGACTGGTATTTATTTGTCCATTTGGTAT +
Preference number: 1 (lower is better)
Translates to: SLRLHCSDGKPGSCA*RTEKTTGIYLSIWY
Trigger: ATACCAAATGGACAAATAAATACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACAATGAAGACGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR GCA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAACTCCTGAGCGGGCCCTaGTCAAGGGAATGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKLLSGP*SREWCQ
Trigger: CTGGCACCATTCCCTTGAGCAGGGCCCGCTCAGGAG...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR TCA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTAGAGAAAGAGCCTCATaGTCTGCACTCAGACGCTCC +
Preference number: 2 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRRERAS*SALRRS
Trigger: GGAGCGTCTGAGTGCAGATCATGAGGCTCTTTCTCT...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CAA 90 bp TGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGATaGCCTATGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCC +
Preference number: 2 (lower is better)
Translates to: WKTVGVQKLLTQEDG*PMVVRDTGQPQPDP
Trigger: GGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCATAGGCAATCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTCTTGCAAGGAGGACTTaGCTTAACCTTGAGAAACTG +
Preference number: 2 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRLARRT*LNLEKL
Trigger: CAGTTTCTCAAGGTTAAGCCAAGTCCTCCTTGCAAG...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp CCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGAGAAACTGGCAGACCTaGTCCCTCCTGAGCGGGCCC +
Preference number: 2 (lower is better)
Translates to: PYFTHPKKHHHRRFVGRLRNWQT*SLLSGP
Trigger: GGGCCCGCTCAGGAGGGACCAGGTCTGCCAGTTTCT...CAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTGAAAGAAGCCTCCTCTaGTGGTTGATAAGCAATTCT +
Preference number: 2 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRERSLL*WLISNS
Trigger: AGAATTGCTTATCAACCACCAGAGGAGGCTTCTTTC...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CAA 90 bp GCCACCACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTaGTTCTTATCCACCATGTCGGCATCACTTCCATTTTCTGACCGG +
Preference number: 2 (lower is better)
Translates to: ATTAEVNDMLQSVQH*FLSTMSASLPFSDR
Trigger: CCGGTCAGAAAATGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
3UTR-3UTR TCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACAGAGAAAGAGCCTCATaGTCTGCACTCAGACGCTCC +
Preference number: 2 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNRERAS*SALRRS
Trigger: GGAGCGTCTGAGTGCAGATCATGAGGCTCTTTCTCT...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR GCA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAATGCTCAAGGGAATGGTaGCAGATTTTGAACACAGGT +
Preference number: 2 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKCSREW*QILNTG
Trigger: ACCTGTGTTCAAAATCTGGCACCATTCCCTTGAGCA...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR GCA 90 bp ATGTCGGCATCACTTCCATTTTCTGACCGGAGCCTCTTGGCAGGACACCCTCCACAGTCGGACTTTGCTTaGATGTTTTCGACTCTTGAC +
Preference number: 2 (lower is better)
Translates to: MSASLPFSDRSLLAGHPPQSDFA*MFSTLD
Trigger: GTCAAGAGTCGAAAACATGCAAGCAAAGTCCGACTG...TGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAGAAAATGGAAGTGATGCCGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523542.5
3UTR-3UTR CCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACCCTGGCTCCTGTGCTTaGAGAACGGAGAAAACGACT +
Preference number: 2 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNPGSCA*RTEKTT
Trigger: AGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGG...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGAAGAAGCCTCCTCTGGTaGTTGATAAGCAATTCTCCA +
Preference number: 2 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRRSLLW*LISNSP
Trigger: TGGAGAATTGCTTATCAACCACCAGAGGAGGCTTCT...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CAA 90 bp TGTTGCCACCTCAGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATaGCTGACACAAGAAGATGGATTGCCTATGGTCGTTAGGGACACA +
Preference number: 2 (lower is better)
Translates to: CCHLSSWWKTVGVQK*LTQEDGLPMVVRDT
Trigger: TGTGTCCCTAACGACCATAGGCAATCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR TCA 90 bp AGGACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCAGAATTCTGGACCCTTaGCTTATTGACACAGCTAGT +
Preference number: 2 (lower is better)
Translates to: RTPSIPGVKHVIQSDFACRILDP*LIDTAS
Trigger: ACTAGCTGTGTCAATAAGTCAAGGGTCCAGAATTCT...GCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522623.1
3UTR-3UTR GCA 90 bp GAATCGGCCACCACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTTGAATACAGTCGGACTTTaGTTGCATGTTTTCGACTCT +
Preference number: 2 (lower is better)
Translates to: ESATTAEVNDMLQSVQHLNTVGL*LHVFDS
Trigger: AGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATT...CAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGTGGCCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523542.5
3UTR-3UTR GCA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAACTAAGAAGATCATCATaGAGGCAGACTAATTCTTTT +
Preference number: 2 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKLRRSS*RQTNSF
Trigger: AAAAGAATTAGTCTGCCTGCATGATGATCTTCTTAG...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR GCA 90 bp CAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACCTAAGAAGATCATCATaGAGGCAGACTAATTCTTTT +
Preference number: 2 (lower is better)
Translates to: QGIVSRSSTSHFVTRLQDLRRSS*RQTNSF
Trigger: AAAAGAATTAGTCTGCCTGCATGATGATCTTCTTAG...GTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp AGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGACTTGCAAGGAGGACTTaGCTTAACCTTGAGAAACTG +
Preference number: 2 (lower is better)
Translates to: SSWWKTVGVQKLLTQEDGLARRT*LNLEKL
Trigger: CAGTTTCTCAAGGTTAAGCCAAGTCCTCCTTGCAAG...TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CAA 90 bp ACAACACTGTGCATTTCTGTGTCATTTTGTTTATTGCTCACTGAGTaGTTGCCACCTCAGCTCTTGGTGGAAAACAGTGGGTGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: TTLCISVSFCLLLTE*LPPQLLVENSGCPE
Trigger: TTCTGGACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCAATAAACAAAATGACACAGAAATGCACAGTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR GCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTAAGAGCCTCATGATCTaGACTCAGACGCTCCCCATC +
Preference number: 2 (lower is better)
Translates to: LTNKALFYTSEETPSQEVKSLMI*TQTLPI
Trigger: GATGGGGAGCGTCTGAGTGCAGATCATGAGGCTCTT...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR GCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGCTCACTGAGTTGTTaGCACCTCAGCTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: LTNKALFYTSEETPSQEVCSLSC*HLSSWW
Trigger: CCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCA...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CAA 90 bp CCTGGCTCCTGTGCTTGGAGAACGGAGAAAACGACTGGTATTTATTaGTCCATTTGGTATTTTCCACTAATAGTGATCTGTTCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: PGSCAWRTEKTTGIY*SIWYFPLIVICSSS
Trigger: AGAACTGGAACAGATCACTATTAGTGGAAAATACCAAATGGACAAATAAATACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR TCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTATGCTCTTTCCAGAGTaGCTGAGTCTTGGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: LTNKALFYTSEETPSQEVMLFPE*LSLGSA
Trigger: TGCTGAGCCAAGACTCAGTCACTCTGGAAAGAGCAT...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTGAAAGAAGCCTCCTCTaGTGGTTGATAAGCAATTCT +
Preference number: 2 (lower is better)
Translates to: QKGTVFFIGHALSRVTESERSLL*WLISNS
Trigger: AGAATTGCTTATCAACCACCAGAGGAGGCTTCTTTC...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCAACGGAGAAAACGACTaGTATTTATTTGTCCATTTG +
Preference number: 2 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLNGEND*YLFVHL
Trigger: CAAATGGACAAATAAATACCAGTCGTTTTCTCCGTT...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CCA 90 bp CATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGGTCAGAATTCACACTTCCTCAAGAATTCTaGACCCTTGACTTATTGACA +
Preference number: 2 (lower is better)
Translates to: HVIQSDFACMFSTGSEFTLPQEF*TLDLLT
Trigger: TGTCAATAAGTCAAGGGTCCAGAATTCTTGAGGAAG...TGTGAATTCTGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522623.1
3UTR CAA 90 bp CTGTGCTTGGAGAACGGAGAAAACGACTGGTATTTATTTGTCCATTaGGTATTTTCCACTAATAGTGATCTGTTCCAGTTCTGTGCATGT +
Preference number: 2 (lower is better)
Translates to: LCLENGENDWYLFVH*VFSTNSDLFQFCAC
Trigger: ACATGCACAGAACTGGAACAGATCACTATTAGTGGAAAATACCAAATGGACAAATAAATACCAGTCGTTTTCTCCGTTCTCCAAGCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR GCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTCACAAGAAGATGGATTaGCTATGGTCGTTAGGGACA +
Preference number: 2 (lower is better)
Translates to: LTNKALFYTSEETPSQEVHKKMD*LWSLGT
Trigger: TGTCCCTAACGACCATAGGCAATCCATCTTCTTGTG...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 72 bp GCTTCGTCTCTCTGCAGGCACAGAAACTGGCAGACCTaGTCCCTCCTGAGCGGGCCCTGCTCAAGGGAATGG +
Preference number: 3 (lower is better)
Translates to: ASSLCRHRNWQT*SLLSGPCSREW
Trigger: CCATTCCCTTGAGCAGGGCCCGCTCAGGAGGGACCAGGTCTGCCAGTTTCTGTGCCTGCAGAGAGACGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR GCA 72 bp AGAAACTGGCAGACCTGGTCCCTCCTGAGCGGGCCCTaGTCAAGGGAATGGTGCCAGATTTTGAACACAGGT +
Preference number: 3 (lower is better)
Translates to: RNWQTWSLLSGP*SREWCQILNTG
Trigger: ACCTGTGTTCAAAATCTGGCACCATTCCCTTGAGCAGGGCCCGCTCAGGAGGGACCAGGTCTGCCAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 72 bp ACCTGGTCCCTCCTGAGCGGGCCCTGCTCAAGGGAATaGTGCCAGATTTTGAACACAGGTAAACAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: TWSLLSGPCSRE*CQILNTGKQAP
Trigger: AGGAGCCTGTTTACCTGTGTTCAAAATCTGGCACCATTCCCTTGAGCAGGGCCCGCTCAGGAGGGACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 72 bp AACCCCCTTTCCTCTTGTAGAGTAGGGTGTGGCTCGTaGGGCTTCGTCTCTCTGCAGGCACAGAAACTGGCA +
Preference number: 3 (lower is better)
Translates to: NPLSSCRVGCGS*GFVSLQAQKLA
Trigger: TGCCAGTTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGAGGAAAGGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 72 bp CTGACCGGAGCCTCTTGGCAGGACACCCTCCATCCCTaGGGTGAAGCATGTAATACAGTCGGACTTTGCTTG +
Preference number: 3 (lower is better)
Translates to: LTGASWQDTLHP*GEACNTVGLCL
Trigger: CAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
3UTR GCA 72 bp TGGTCCCTCCTGAGCGGGCCCTGCTCAAGGGAATGGTaGCAGATTTTGAACACAGGTAAACAGGCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: WSLLSGPCSREW*QILNTGKQAPS
Trigger: TGAAGGAGCCTGTTTACCTGTGTTCAAAATCTGGCACCATTCCCTTGAGCAGGGCCCGCTCAGGAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp CAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACAGCCTCCTCTGGTGGTaGATAAGCAATTCTCCACGG +
Preference number: 3 (lower is better)
Translates to: QGIVSRSSTSHFVTRLQDSLLWW*ISNSPR
Trigger: CCGTGGAGAATTGCTTATCAACCACCAGAGGAGGCT...GTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAAACACAAGAAGATGGATaGCCTATGGTCGTTAGGGAC +
Preference number: 3 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKTQEDG*PMVVRD
Trigger: GTCCCTAACGACCATAGGCAATCCATCTTCTTGTGT...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp TGTTCAGATGGTAAACCTGGCTCCTGTGCTTGGAGAACGGAGAAAACGACTGGTAGCCTCCTCTGGTGGTaGATAAGCAATTCTCCACGG +
Preference number: 3 (lower is better)
Translates to: CSDGKPGSCAWRTEKTTGSLLWW*ISNSPR
Trigger: CCGTGGAGAATTGCTTATCAACCACCAGAGGAGGCT...ACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCACCTGGCTCCTGTGCTaGGAGAACGGAGAAAACGAC +
Preference number: 3 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLTWLLC*ENGEND
Trigger: GTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGT...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACTTGCCACCTCAGCTCTaGGTGGAAAACAGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNLPPQL*VENSGC
Trigger: ACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAA...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAAGAATGGTGCCAGATTTaGAACACAGGTAAACAGGCT +
Preference number: 3 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKEWCQI*NTGKQA
Trigger: AGCCTGTTTACCTGTGTTCAAAATCTGGCACCATTC...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR TCA 72 bp TGCCTTGATAATGGGAATCGGCCACCACCGCTGAAGTaGATGACATGTTGCAGAGTGTGCAGCACTTGTTCT +
Preference number: 3 (lower is better)
Translates to: CLDNGNRPPPLK*MTCCRVCSTCS
Trigger: AGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGTGGCCGATTCCCATTATCAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
3UTR-3UTR CAA 90 bp CAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACCTATTATTTGGCAACTaGCAAGGAGGACTTGGCTTA +
Preference number: 3 (lower is better)
Translates to: QGIVSRSSTSHFVTRLQDLLFGN*QGGLGL
Trigger: TAAGCCAAGTCCTCCTTGCAAGTTGCCAAATAATAG...GTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACACACAAGAAGATGGATaGCCTATGGTCGTTAGGGAC +
Preference number: 3 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNTQEDG*PMVVRD
Trigger: GTCCCTAACGACCATAGGCAATCCATCTTCTTGTGT...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR GCA 72 bp CCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTaGATGTTTTCGACTGGGTCAGAATTCACACAGCCA +
Preference number: 3 (lower is better)
Translates to: PGVKHVIQSDFA*MFSTGSEFTQP
Trigger: TGGCTGTGTGAATTCTGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522623.1
3UTR-3UTR CAA 90 bp GTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACACCAAGTCCGCTGTGAAGACGTTTTaGCCTAAGAAGATCATCATG +
Preference number: 3 (lower is better)
Translates to: VSRSSTSHFVTRLQDTKSAVKTF*PKKIIM
Trigger: CATGATGATCTTCTTAGGCAAAAACGTCTTCACAGC...GGACTTGGTGTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp GCAAGAGTTTTAACCTCTTGGCGTGGATTTTGCCTTGATAATGGGAATCGGCCACAGAGTGTGCAGCACTaGTTCTTATCCACCATGTCG +
Preference number: 3 (lower is better)
Translates to: ARVLTSWRGFCLDNGNRPQSVQH*FLSTMS
Trigger: CGACATGGTGGATAAGAACAAGTGCTGCACACTCTG...TGGCCGATTCCCATTATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
3UTR GCA 72 bp CATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTaGTTGCATGTTTTCGACTGGGTCAGAATTCACACA +
Preference number: 3 (lower is better)
Translates to: HPWGEACNTVGL*LHVFDWVRIHT
Trigger: TGTGTGAATTCTGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522623.1
3UTR CCA 72 bp TATTGCTCACTGAGTTGTTGCCACCTCAGCTCTTGGTaGAAAACAGTGGGTGTCCAGAAATTGCTGACACAA +
Preference number: 3 (lower is better)
Translates to: YCSLSCCHLSSW*KTVGVQKLLTQ
Trigger: TTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 72 bp GTTTATTGCTCACTGAGTTGTTGCCACCTCAGCTCTTaGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACA +
Preference number: 3 (lower is better)
Translates to: VYCSLSCCHLSS*WKTVGVQKLLT
Trigger: TGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR GCA 72 bp GAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTaGTTTCCAAAACAGCAAAATAGATTCTTCCCATCC +
Preference number: 3 (lower is better)
Translates to: ETPSQEVCRSAV*FPKQQNRFFPS
Trigger: GGATGGGAAGAATCTATTTTGCTGTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CCA 72 bp TTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTTaGCTCAGCAGTAGGACTTCAGTGAGAAACAGAAGA +
Preference number: 3 (lower is better)
Translates to: FIGHALSRVTES*LSSRTSVRNRR
Trigger: TCTTCTGTTTCTCACTGAAGTCCTACTGCTGAGCCAAGACTCAGTCACTCTGGAAAGAGCATGACCGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTACCTGGCTCCTGTGCTaGGAGAACGGAGAAAACGAC +
Preference number: 3 (lower is better)
Translates to: LTNKALFYTSEETPSQEVTWLLC*ENGEND
Trigger: GTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGT...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR GCA 72 bp CCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTaGATGTTTTCGACTCTTGACTTATTGACACAGCTA +
Preference number: 3 (lower is better)
Translates to: PGVKHVIQSDFA*MFSTLDLLTQL
Trigger: TAGCTGTGTCAATAAGTCAAGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523542.5
3UTR CCA 72 bp CTTCATTGTTCAGATGGTAAACCTGGCTCCTGTGCTTaGAGAACGGAGAAAACGACTGGTATTTATTTGTCC +
Preference number: 3 (lower is better)
Translates to: LHCSDGKPGSCA*RTEKTTGIYLS
Trigger: GGACAAATAAATACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR-3UTR CAA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTTTCCTAAGCTATTATTaGGCAACTTGCAAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: QKGTVFFIGHALSRVTESFLSYY*ATCKED
Trigger: GTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAA...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGAGAGGCCAGCTGCCCTaGCGAGCAGTAGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRRGQLP*RAVERS
Trigger: GCTTCGCTCTACTGCTCGGCAGGGCAGCTGGCCTCT...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTAGACCTGGTCCCTCCTaGGCGGGCCCTGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRRPGPS*AGPAQG
Trigger: CCCTTGAGCAGGGCCCGCTCAGGAGGGACCAGGTCT...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGCCACCACCGCTGAAGTaGATGACATGTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRPPPLK*MTCCRV
Trigger: CACTCTGCAACATGTCATTCACTTCAGCGGTGGTGG...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGTGCCACCTCAGCTCTTaGTGGAAAACAGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRCHLSS*WKTVGV
Trigger: GACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCA...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGTTCGGAGATCAGCTGTaGACTGCACACCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRFGDQL*TAHLAV
Trigger: TACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAA...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGTGCGCCTCAGACCTGTaGTCTTTAATGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRCASDL*SLMGSS
Trigger: AGAAGACCCCATTAAAGACCACAGGTCTGAGGCGCA...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315769.11
CDS-3UTR CCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGAAGAAACTGGCAGACCTaGTCCCTCCTGAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRRNWQT*SLLSGP
Trigger: GGGCCCGCTCAGGAGGGACCAGGTCTGCCAGTTTCT...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGTCTTGGCGTGGATTTTaGCTTGATAATGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRSWRGF*LDNGNR
Trigger: CCGATTCCCATTATCAAGGCAAAATCCACGCCAAGA...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGTGCTCAAGGGAATGGTaGCAGATTTTGAACACAGGT +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRCSREW*QILNTG
Trigger: ACCTGTGTTCAAAATCTGGCACCATTCCCTTGAGCA...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp GACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATCTGACCGGAGCCTCTTaGCAGGACACCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: DTLHPWGEACNTVGLCLHLTGAS*QDTLHP
Trigger: GGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAG...ATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGCTTGCAAGGAGGACTTaGCTTAACCTTGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRLARRT*LNLEKL
Trigger: CAGTTTCTCAAGGTTAAGCCAAGTCCTCCTTGCAAG...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp AGGACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCTGGGCTGGAGCACGCTaGGGATTACACGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RTPSIPGVKHVIQSDFACWAGAR*GLHVPV
Trigger: GACAGGAACGTGTAATCCTCAGCGTGCTCCAGCCCA...GCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS-3UTR TCA 90 bp AGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGAAGACCTGGTCCCTCCTaGGCGGGCCCTGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SSWWKTVGVQKLLTQEDGRPGPS*AGPAQG
Trigger: CCCTTGAGCAGGGCCCGCTCAGGAGGGACCAGGTCT...TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGAAGCAGTGTCCATCCGTaGGGGCTTAAGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRSSVHP*GLKWAQ
Trigger: CTGAGCCCACTTAAGCCCCCACGGATGGACACTGCT...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR CCA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGGAAAGAAGCCTCCTCTaGTGGTTGATAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRERSLL*WLISNS
Trigger: AGAATTGCTTATCAACCACCAGAGGAGGCTTCTTTC...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAAAGAGAAAGAGCCTCATaGTCTGCACTCAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKRERAS*SALRRS
Trigger: GGAGCGTCTGAGTGCAGATCATGAGGCTCTTTCTCT...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CAGGACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGACACGTTCCTGTCTCTaGGACCAGACCTTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: QDTLHPWGEACNTVGLCLTRSCL*DQTFRQ
Trigger: CTGCCGAAAGGTCTGGTCGCAGAGACAGGAACGTGT...CAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523188.5
CDS-3UTR GCA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCAGAGGCCAGCTGCCCTaGCGAGCAGTAGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLRGQLP*RAVERS
Trigger: GCTTCGCTCTACTGCTCGGCAGGGCAGCTGGCCTCT...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp GTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACACCAAGTCCGGGGCTTCGTCTCTCTaGAGGCACAGAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: VSRSSTSHFVTRLQDTKSGASSL*RHRNWQ
Trigger: CTGCCAGTTTCTGTGCCTGCAGAGAGACGAAGCCCC...GGACTTGGTGTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGGACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCAGCGAAGCTGTGGGCTaGAGCACGCTGAGGATTACA +
Preference number: 4 (lower is better)
Translates to: RTPSIPGVKHVIQSDFACSEAVG*STLRIT
Trigger: TGTAATCCTCAGCGTGCTCCAGCCCACAGCTTCGCT...GCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CCA 90 bp CAGGACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGAGCGAAGCTGTGGGCTaGAGCACGCTGAGGATTACA +
Preference number: 4 (lower is better)
Translates to: QDTLHPWGEACNTVGLCLSEAVG*STLRIT
Trigger: TGTAATCCTCAGCGTGCTCCAGCCCACAGCTTCGCT...CAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CCA 90 bp ATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCACCATGTCGGCATCACTTCCACTGACCGGAGCCTCTTaGCAGGACACCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: MLQSVQHLFLSTMSASLPLTGAS*QDTLHP
Trigger: GGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAG...TGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCACACTCTGCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACGTAGGGTGTGGCTCGTaGGGCTTCGTCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNVGCGS*GFVSLQ
Trigger: CTGCAGAGAGACGAAGCCCCACGAGCCACACCCTAC...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CAA 72 bp GTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGATaGCCTATGGTCGTTAGGGACACAGGGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VGVQKLLTQEDG*PMVVRDTGQPQ
Trigger: CTGGGGCTGCCCTGTGTCCCTAACGACCATAGGCAATCCATCTTCTTGTGTCAGCAATTTCTGGACACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp ACCTCTTGGCGTGGATTTTGCCTTGATAATGGGAATCGGCCACCACCGCTGAAGCCACCACCGCTGAAGTaGATGACATGTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TSWRGFCLDNGNRPPPLKPPPLK*MTCCRV
Trigger: CACTCTGCAACATGTCATTCACTTCAGCGGTGGTGG...CTTCAGCGGTGGTGGCCGATTCCCATTATCAAGGCAAAATCCACGCCAAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR TCA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAAATGCTCTTTCCAGAGTaGCTGAGTCTTGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKMLFPE*LSLGSA
Trigger: TGCTGAGCCAAGACTCAGTCACTCTGGAAAGAGCAT...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp CAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACAGAGAAAGAGCCTCATaGTCTGCACTCAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: QGIVSRSSTSHFVTRLQDRERAS*SALRRS
Trigger: GGAGCGTCTGAGTGCAGATCATGAGGCTCTTTCTCT...GTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp ATGTCGGCATCACTTCCATTTTCTGACCGGAGCCTCTTGGCAGGACACCCTCCATTCGGAGATCAGCTGTaGACTGCACACCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: MSASLPFSDRSLLAGHPPFGDQL*TAHLAV
Trigger: TACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAA...TGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAGAAAATGGAAGTGATGCCGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CCA 90 bp GGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGGTCAGACTGACCGGAGCCTCTTaGCAGGACACCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: GEACNTVGLCLHVFDWVRLTGAS*QDTLHP
Trigger: GGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAG...TCTGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522623.1
ENST00000523188.5
CDS-3UTR CCA 90 bp CAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACCACCTCAGCTCTTGGTaGAAAACAGTGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QGIVSRSSTSHFVTRLQDHLSSW*KTVGVQ
Trigger: CTGGACACCCACTGTTTTCCACCAAGAGCTGAGGTG...GTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGACACCTCAGCTCTTGGTaGAAAACAGTGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRHLSSW*KTVGVQ
Trigger: CTGGACACCCACTGTTTTCCACCAAGAGCTGAGGTG...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACACACGTTCCTGTCTCTaGGACCAGACCTTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNTRSCL*DQTFRQ
Trigger: CTGCCGAAAGGTCTGGTCGCAGAGACAGGAACGTGT...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAAAGATCAGCTGTGCACTaGACACCTTGCAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKRSAVH*TPCSNC
Trigger: ACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCT...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGCATTCCCAGAGGAACTaGACCACACTCGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PWGEACNTVGLCLHVFDWHSQRN*TTLVVG
Trigger: GCCCACTACGAGTGTGGTGCAGTTCCTCTGGGAATG...CCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS-3UTR CCA 90 bp CCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGCCGTGGGGGCTTAAGTaGGCTCAGGGGTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PYFTHPKKHHHRRFVGRLPWGLK*AQGCCC
Trigger: ACAGCAACACCCCTGAGCCCACTTAAGCCCCCACGG...CAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR CCA 90 bp GACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATCTTCCTCAAGAATTCTaGACCCTCGTAGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: DTLHPWGEACNTVGLCLHLPQEF*TLVVGH
Trigger: GTGGCCCACTACGAGGGTCCAGAATTCTTGAGGAAG...ATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523188.5
CDS-3UTR TCA 90 bp GGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGGTCAGATGGGCTGGAGCACGCTaGGGATTACACGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GEACNTVGLCLHVFDWVRWAGAR*GLHVPV
Trigger: GACAGGAACGTGTAATCCTCAGCGTGCTCCAGCCCA...TCTGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522623.1
ENST00000523188.5
CDS-3UTR TCA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTCCTTTCAGATGGGCATaGTACTGTTCTATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRPFRWA*YCSIEF
Trigger: AAACTCAATAGAACAGTATCATGCCCATCTGAAAGG...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAAAATGGTGCCAGATTTTaGACACAGGTAAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKNGARF*TQVNRL
Trigger: GAGCCTGTTTACCTGTGTTCAAAATCTGGCACCATT...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp AGGACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCAGATCAGCTGTGCACTaGACACCTTGCAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: RTPSIPGVKHVIQSDFACRSAVH*TPCSNC
Trigger: ACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCT...GCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp ACCTCTTGGCGTGGATTTTGCCTTGATAATGGGAATCGGCCACCACCGCTGAAGAGATCAGCTGTGCACTaGACACCTTGCAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: TSWRGFCLDNGNRPPPLKRSAVH*TPCSNC
Trigger: ACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCT...CTTCAGCGGTGGTGGCCGATTCCCATTATCAAGGCAAAATCCACGCCAAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTAATACAGTCGGACTTTaGTTGCATGTTTTCGACTCT +
Preference number: 4 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRNTVGL*LHVFDS
Trigger: AGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATT...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp GGCAGGACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTCTTGGCGTGGATTTTaGCTTGATAATGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: GRTPSIPGVKHVIQSDFASWRGF*LDNGNR
Trigger: CCGATTCCCATTATCAAGGCAAAATCCACGCCAAGA...AGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACAAGAGCCTCATGATCTaGACTCAGACGCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNKSLMI*TQTLPI
Trigger: GATGGGGAGCGTCTGAGTGCAGATCATGAGGCTCTT...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGTTCAGATGGTAAACCTGGCTCCTGTGCTTGGAGAACGGAGAAAACGACTGGTATCCCAGCTGGTCCATaGAGGGCATCGTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: CSDGKPGSCAWRTEKTTGIPAGP*RASSVE
Trigger: TTCTACTGACGATGCCCTGCATGGACCAGCTGGGAT...ACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp ATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCACCATGTCGGCATCACTTCCACATTCCCAGAGGAACTaGACCACACTCGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: MLQSVQHLFLSTMSASLPHSQRN*TTLVVG
Trigger: GCCCACTACGAGTGTGGTGCAGTTCCTCTGGGAATG...TGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCACACTCTGCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523542.5
CDS-3UTR CCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTCTGACCGGAGCCTCTTaGCAGGACACCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESLTGAS*QDTLHP
Trigger: GGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAG...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp GTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACACCAAGTCCAAGATGGATTGCCTATaGTCGTTAGGGACACAGGGC +
Preference number: 4 (lower is better)
Translates to: VSRSSTSHFVTRLQDTKSKMDCL*SLGTQG
Trigger: GCCCTGTGTCCCTAACGACCATAGGCAATCCATCTT...GGACTTGGTGTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGATTGTTTATTGCTCACTaGGTTGTTGCCACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRLFIAH*VVATSA
Trigger: AGCTGAGGTGGCAACAACTCAGTGAGCAATAAACAA...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp AGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGAACACGTTCCTGTCTCTaGGACCAGACCTTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: SSWWKTVGVQKLLTQEDGTRSCL*DQTFRQ
Trigger: CTGCCGAAAGGTCTGGTCGCAGAGACAGGAACGTGT...TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACTTCGGAGATCAGCTGTaGACTGCACACCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNFGDQL*TAHLAV
Trigger: TACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAA...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCATCCCAGCTGGTCCATaGAGGGCATCGTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLIPAGP*RASSVE
Trigger: TTCTACTGACGATGCCCTGCATGGACCAGCTGGGAT...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp GACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATCAGTCGGACTTTGCTTaGATGTTTTCGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: DTLHPWGEACNTVGLCLHQSDFA*MFSTGS
Trigger: TGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTG...ATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522623.1
ENST00000523188.5
CDS-3UTR CCA 90 bp AGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGAAGCGAAGCTGTGGGCTaGAGCACGCTGAGGATTACA +
Preference number: 4 (lower is better)
Translates to: SSWWKTVGVQKLLTQEDGSEAVG*STLRIT
Trigger: TGTAATCCTCAGCGTGCTCCAGCCCACAGCTTCGCT...TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TTGCAGAGTGTGCAGCACTTGTTCTTATCCACCATGTCGGCATCACTTCCATTTCCACCACCGCTGAAGTaGATGACATGTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LQSVQHLFLSTMSASLPFPPPLK*MTCCRV
Trigger: CACTCTGCAACATGTCATTCACTTCAGCGGTGGTGG...AAATGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCACACTCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACAGATCAGCTGTGCACTaGACACCTTGCAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNRSAVH*TPCSNC
Trigger: ACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCT...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp ACTTGTTCTTATCCACCATGTCGGCATCACTTCCATTTTCTGACCGGAGCCTCTTTCGGAGATCAGCTGTaGACTGCACACCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: TCSYPPCRHHFHFLTGASFGDQL*TAHLAV
Trigger: TACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAA...AGAGGCTCCGGTCAGAAAATGGAAGTGATGCCGACATGGTGGATAAGAACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp AGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGATGCTCACTGAGTTGTTaGCACCTCAGCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSWWKTVGVQKLLTQEDGCSLSC*HLSSWW
Trigger: CCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCA...TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTACTGACCGGAGCCTCTTaGCAGGACACCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLLTGAS*QDTLHP
Trigger: GGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAG...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp GTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACACCAAGTCCCTTGCAAGGAGGACTTaGCTTAACCTTGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: VSRSSTSHFVTRLQDTKSLARRT*LNLEKL
Trigger: CAGTTTCTCAAGGTTAAGCCAAGTCCTCCTTGCAAG...GGACTTGGTGTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTAAGAAACTGGCAGACCTaGTCCCTCCTGAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLRNWQT*SLLSGP
Trigger: GGGCCCGCTCAGGAGGGACCAGGTCTGCCAGTTTCT...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp ATACAGTCGGACTTTGCTTGCATGTTTTCGACTCTTGACTTATTGACACAGCTATGGGCTGGAGCACGCTaGGGATTACACGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: IQSDFACMFSTLDLLTQLWAGAR*GLHVPV
Trigger: GACAGGAACGTGTAATCCTCAGCGTGCTCCAGCCCA...TAGCTGTGTCAATAAGTCAAGAGTCGAAAACATGCAAGCAAAGTCCGACTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523542.5
CDS-3UTR TCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGACCTTTCAGATGGGCATaGTACTGTTCTATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRPFRWA*YCSIEF
Trigger: AAACTCAATAGAACAGTATCATGCCCATCTGAAAGG...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TGTTCAGATGGTAAACCTGGCTCCTGTGCTTGGAGAACGGAGAAAACGACTGGTAATGGTGCCAGATTTTaGACACAGGTAAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: CSDGKPGSCAWRTEKTTGNGARF*TQVNRL
Trigger: GAGCCTGTTTACCTGTGTTCAAAATCTGGCACCATT...ACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp ACTTTGCTTGCATGTTTTCGACTGGGTCAGAATTCACACAGCCACCTTCTTCAGTTCGGAGATCAGCTGTaGACTGCACACCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: TLLACFRLGQNSHSHLLQFGDQL*TAHLAV
Trigger: TACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAA...CTGAAGAAGGTGGCTGTGTGAATTCTGACCCAGTCGAAAACATGCAAGCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS-3UTR GCA 90 bp GACACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATACATGTTGCAGAGTGTaGAGCACTTGTTCTTATCCA +
Preference number: 4 (lower is better)
Translates to: DTLHPWGEACNTVGLCLHTCCRV*STCSYP
Trigger: TGGATAAGAACAAGTGCTGCACACTCTGCAACATGT...ATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACTCTTGGCGTGGATTTTaGCTTGATAATGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNSWRGF*LDNGNR
Trigger: CCGATTCCCATTATCAAGGCAAAATCCACGCCAAGA...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACAGTTTAGGGAGACACTaGAGATGGTACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: QGIVSRSSTSHFVTRLQDSLGRH*RWYICN
Trigger: ATTACAGATGTACCATCTGCAGTGTCTCCCTAAACT...GTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGTTCAGATGGTAAACCTGGCTCCTGTGCTTGGAGAACGGAGAAAACGACTGGTCACAAGAAGATGGATTaGCTATGGTCGTTAGGGACA +
Preference number: 4 (lower is better)
Translates to: CSDGKPGSCAWRTEKTTGHKKMD*LWSLGT
Trigger: TGTCCCTAACGACCATAGGCAATCCATCTTCTTGTG...ACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATCTCCTGAGCGGGCCCTaGTCAAGGGAATGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDLLSGP*SREWCQ
Trigger: CTGGCACCATTCCCTTGAGCAGGGCCCGCTCAGGAG...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTAGCGAAGCTGTGGGCTaGAGCACGCTGAGGATTACA +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESSEAVG*STLRIT
Trigger: TGTAATCCTCAGCGTGCTCCAGCCCACAGCTTCGCT...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGATTCTTCAGGTTGGTCTaGTGTTTAGATCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRFFRLV*CLDPFR
Trigger: TCTGAAAGGATCTAAACACCAGACCAACCTGAAGAA...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGACAAGTCCGGTCACCATaGAAAAGAATTAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRQVRSP*KRIKPR
Trigger: TCTAGGTTTAATTCTTTTCCATGGTGACCGGACTTG...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTTGGGCTGGAGCACGCTaGGGATTACACGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLWAGAR*GLHVPV
Trigger: GACAGGAACGTGTAATCCTCAGCGTGCTCCAGCCCA...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCCCCACAGTATCTGTCTaGATCTCTTCTTTGATAGGG +
Preference number: 4 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLPTVSV*ISSLIG
Trigger: CCCTATCAAAGAAGAGATTCAGACAGATACTGTGGG...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR GCA 90 bp GCAAGAGTTTTAACCTCTTGGCGTGGATTTTGCCTTGATAATGGGAATCGGCCAAGATCAGCTGTGCACTaGACACCTTGCAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: ARVLTSWRGFCLDNGNRPRSAVH*TPCSNC
Trigger: ACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCT...TGGCCGATTCCCATTATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp ACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCACCTCTTGGCGTGGATTTTaGCTTGATAATGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: TAEVNDMLQSVQHLFLSTSWRGF*LDNGNR
Trigger: CCGATTCCCATTATCAAGGCAAAATCCACGCCAAGA...GGTGGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp ACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCACCCAGTCGGACTTTGCTTaGATGTTTTCGACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TAEVNDMLQSVQHLFLSTQSDFA*MFSTLD
Trigger: GTCAAGAGTCGAAAACATGCAAGCAAAGTCCGACTG...GGTGGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523542.5
CDS-3UTR CCA 90 bp CCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGCCCTGCTCAAGGGAATaGTGCCAGATTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: PYFTHPKKHHHRRFVGRLPCSRE*CQILNT
Trigger: TGTGTTCAAAATCTGGCACCATTCCCTTGAGCAGGG...CAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp ACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCACCTTGCATGTTTTCGACTaGGTCAGAATTCACACAGCC +
Preference number: 4 (lower is better)
Translates to: TAEVNDMLQSVQHLFLSTLHVFD*VRIHTA
Trigger: GGCTGTGTGAATTCTGACCCAGTCGAAAACATGCAA...GGTGGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523188.5
3UTR CAA 72 bp CTCAGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATaGCTGACACAAGAAGATGGATTGCCTATGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LSSWWKTVGVQK*LTQEDGLPMVV
Trigger: AACGACCATAGGCAATCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
3UTR CAA 72 bp TGTTTATTGCTCACTGAGTTGTTGCCACCTCAGCTCTaGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: CLLLTELLPPQL*VENSGCPEIAD
Trigger: GTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCAATAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGGGCTGGAGCACGCTaGGGATTACACGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LTNKALFYTSEETPSQEVWAGAR*GLHVPV
Trigger: GACAGGAACGTGTAATCCTCAGCGTGCTCCAGCCCA...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp CCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGGTCTGTGAATAAATCCTaGTCAATATCGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: PGVKHVIQSDFACMFSTGSVNKS*SISEDF
Trigger: GAAGTCCTCCGATATTGATCAGGATTTATTCACAGA...CCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522623.1
ENST00000523188.5
CDS-3UTR TCA 90 bp AGCACTTGTTCTTATCCACCATGTCGGCATCACTTCCATTTTCTGACCGGAGCCTCTGTGAATAAATCCTaGTCAATATCGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: STCSYPPCRHHFHFLTGASVNKS*SISEDF
Trigger: GAAGTCCTCCGATATTGATCAGGATTTATTCACAGA...GGCTCCGGTCAGAAAATGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR TCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTATGCTCTTTCCAGAGTaGCTGAGTCTTGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESMLFPE*LSLGSA
Trigger: TGCTGAGCCAAGACTCAGTCACTCTGGAAAGAGCAT...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp GTGCAGCACTTGTTCTTATCCACCATGTCGGCATCACTTCCATTTTCTGACCGGAATACAGTCGGACTTTaGTTGCATGTTTTCGACTCT +
Preference number: 4 (lower is better)
Translates to: VQHLFLSTMSASLPFSDRNTVGL*LHVFDS
Trigger: AGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATT...CCGGTCAGAAAATGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523542.5
CDS-3UTR GCA 90 bp CTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCACATGTTGCAGAGTGTaGAGCACTTGTTCTTATCCA +
Preference number: 4 (lower is better)
Translates to: LHPWGEACNTVGLCLHVFTCCRV*STCSYP
Trigger: TGGATAAGAACAAGTGCTGCACACTCTGCAACATGT...GAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp AGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGAGTTATTAAACCAGGCTaGACAGAGCCCACAGTATCT +
Preference number: 4 (lower is better)
Translates to: SSWWKTVGVQKLLTQEDGVIKPG*TEPTVS
Trigger: AGATACTGTGGGCTCTGTGCAGCCTGGTTTAATAAC...TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR GCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATGGGGCTTCGTCTCTCTaGAGGCACAGAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDGASSL*RHRNWQ
Trigger: CTGCCAGTTTCTGTGCCTGCAGAGAGACGAAGCCCC...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGTTCAGATGGTAAACCTGGCTCCTGTGCTTGGAGAACGGAGAAAACGACTGGTCAAGTCCGGTCACCATaGAAAAGAATTAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: CSDGKPGSCAWRTEKTTGQVRSP*KRIKPR
Trigger: TCTAGGTTTAATTCTTTTCCATGGTGACCGGACTTG...ACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp GTTTTCGACTGGGTCAGAATTCACACAGCCACCTTCTTCAGTGTGACATCTTCTTTGCATGTTTTCGACTaGGTCAGAATTCACACAGCC +
Preference number: 4 (lower is better)
Translates to: VFDWVRIHTATFFSVTSSLHVFD*VRIHTA
Trigger: GGCTGTGTGAATTCTGACCCAGTCGAAAACATGCAA...AGAAGATGTCACACTGAAGAAGGTGGCTGTGTGAATTCTGACCCAGTCGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522623.1
3UTR CAA 72 bp GCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTaGTTCTTATCCACCATGTCGGCATCACTTCCATTT +
Preference number: 4 (lower is better)
Translates to: AEVNDMLQSVQH*FLSTMSASLPF
Trigger: AAATGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR TCA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTCTGTGAATAAATCCTaGTCAATATCGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLSVNKS*SISEDF
Trigger: GAAGTCCTCCGATATTGATCAGGATTTATTCACAGA...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp GCAGAGTGTGCAGCACTTGTTCTTATCCACCATGTCGGCATCACTTCCATTTTCTCTGTGAATAAATCCTaGTCAATATCGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: AECAALVLIHHVGITSIFSVNKS*SISEDF
Trigger: GAAGTCCTCCGATATTGATCAGGATTTATTCACAGA...GAAAATGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCACACTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR GCA 90 bp GTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACACCAAGTCCCTAAGAAGATCATCATaGAGGCAGACTAATTCTTTT +
Preference number: 4 (lower is better)
Translates to: VSRSSTSHFVTRLQDTKSLRRSS*RQTNSF
Trigger: AAAAGAATTAGTCTGCCTGCATGATGATCTTCTTAG...GGACTTGGTGTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTAAGAGCCTCATGATCTaGACTCAGACGCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLKSLMI*TQTLPI
Trigger: GATGGGGAGCGTCTGAGTGCAGATCATGAGGCTCTT...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGGTCAGAATTCACACAGTCGGACTTTGCTTaGATGTTTTCGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: HVIQSDFACMFSTGSEFTQSDFA*MFSTGS
Trigger: TGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTG...TGTGAATTCTGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS-3UTR GCA 90 bp ACTTTGCTTGCATGTTTTCGACTGGGTCAGAATTCACACAGCCACCTTCTTCAGAATACAGTCGGACTTTaGTTGCATGTTTTCGACTGG +
Preference number: 4 (lower is better)
Translates to: TLLACFRLGQNSHSHLLQNTVGL*LHVFDW
Trigger: CCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATT...CTGAAGAAGGTGGCTGTGTGAATTCTGACCCAGTCGAAAACATGCAAGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS-3UTR GCA 90 bp GCAAGAGTTTTAACCTCTTGGCGTGGATTTTGCCTTGATAATGGGAATCGGCCAAATACAGTCGGACTTTaGTTGCATGTTTTCGACTGG +
Preference number: 4 (lower is better)
Translates to: ARVLTSWRGFCLDNGNRPNTVGL*LHVFDW
Trigger: CCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATT...TGGCCGATTCCCATTATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523188.5
CDS-3UTR GCA 90 bp ACCCTCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTAGTTTTAAGTTACATTaGTCATTCCCAGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: TLHPWGEACNTVGLCLHVSFKLH*SFPEEL
Trigger: CAGTTCCTCTGGGAATGAGCAATGTAACTTAAAACT...AACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522623.1
ENST00000523542.5
CDS-3UTR CCA 90 bp TCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGAGAGTTTTAACCTCTTaGCGTGGATTTTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SIPGVKHVIQSDFACMFSRVLTS*RGFCLD
Trigger: ATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCT...CGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CCA 90 bp CCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGGAAAGAAGCCTCCTCTaGTGGTTGATAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: PYFTHPKKHHHRRFVGRLERSLL*WLISNS
Trigger: AGAATTGCTTATCAACCACCAGAGGAGGCTTCTTTC...CAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTCCTGGCTCCTGTGCTTaGAGAACGGAGAAAACGACT +
Preference number: 4 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLPGSCA*RTEKTT
Trigger: AGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGG...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATCCACCACCGCTGAAGTaGATGACATGTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDPPPLK*MTCCRV
Trigger: CACTCTGCAACATGTCATTCACTTCAGCGGTGGTGG...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTCAGTCGGACTTTGCTTaGATGTTTTCGACTCTCGTA +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESQSDFA*MFSTLV
Trigger: TACGAGAGTCGAAAACATGCAAGCAAAGTCCGACTG...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATTCTTTGATAGGGAGATaGGACCACCGGAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDSLIGR*DHRSSV
Trigger: GACACTGCTCCGGTGGTCGCATCTCCCTATCAAAGA...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR GCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATTGCTCACTGAGTTGTTaGCACCTCAGCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDCSLSC*HLSSWW
Trigger: CCACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCA...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTTGCTCAAGGGAATGGTaGCAGATTTTGAACACAGGT +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESCSREW*QILNTG
Trigger: ACCTGTGTTCAAAATCTGGCACCATTCCCTTGAGCA...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp ACCACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCAGTTTTAAGTTACATTaGTCATTCCCAGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: TTAEVNDMLQSVQHLFLSSFKLH*SFPEEL
Trigger: CAGTTCCTCTGGGAATGAGCAATGTAACTTAAAACT...GGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523542.5
CDS-3UTR CCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTAGACACCCTCCATCCCTaGGGTGAAGCATGTAATACA +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLDTLHP*GEACNT
Trigger: TGTATTACATGCTTCACCCCAGGGATGGAGGGTGTC...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTAGGGAGACACTGCAGATaGTACATCTGTAATTGCGCC +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLGRHCR*YICNCA
Trigger: GGCGCAATTACAGATGTACCATCTGCAGTGTCTCCC...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACAACGGAGAAAACGACTaGTATTTATTTGTCCATTTG +
Preference number: 4 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNNGEND*YLFVHL
Trigger: CAAATGGACAAATAAATACCAGTCGTTTTCTCCGTT...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATCCTGGCTCCTGTGCTTaGAGAACGGAGAAAACGACT +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDPGSCA*RTEKTT
Trigger: AGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGG...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTAAAGATGGATTGCCTATaGTCGTTAGGGACACAGGGC +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLKMDCL*SLGTQG
Trigger: GCCCTGTGTCCCTAACGACCATAGGCAATCCATCTT...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATTGCCACCTCAGCTCTTaGTGGAAAACAGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDCHLSS*WKTVGV
Trigger: GACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCA...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp GACTTTGCTTGCATGTTTTCGACTGGGTCAGAATTCACACAGCCACCTTCTTCACTTCCTCAAGAATTCTaGACCCTTGACTTATTGACA +
Preference number: 4 (lower is better)
Translates to: DFACMFSTGSEFTQPPSSLPQEF*TLDLLT
Trigger: TGTCAATAAGTCAAGGGTCCAGAATTCTTGAGGAAG...TGAAGAAGGTGGCTGTGTGAATTCTGACCCAGTCGAAAACATGCAAGCAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS-3UTR TCA 90 bp GAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGGTCAGAATTAGAATTCTGGACCCTTaGCTTATTGACACAGCTAGT +
Preference number: 4 (lower is better)
Translates to: EACNTVGLCLHVFDWVRIRILDP*LIDTAS
Trigger: ACTAGCTGTGTCAATAAGTCAAGGGTCCAGAATTCT...AATTCTGACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS-3UTR GCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTTGTAGGTCGGCTGTGTaGTTTCCAAAACAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESCRSAV*FPKQQN
Trigger: ATTTTGCTGTTTTGGAAAGCACACAGCCGACCTACA...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTATGGTACATCTGTAATTaGGCCTCAGACCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLWYICN*ASDLWS
Trigger: AGACCACAGGTCTGAGGCGCAATTACAGATGTACCA...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315769.11
CDS-3UTR CCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATGGGAGACACTGCAGATaGTACATCTGTAATTGCGCC +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDGRHCR*YICNCA
Trigger: GGCGCAATTACAGATGTACCATCTGCAGTGTCTCCC...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTACCCTGCTCAAGGGAATaGTGCCAGATTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLPCSRE*CQILNT
Trigger: TGTGTTCAAAATCTGGCACCATTCCCTTGAGCAGGG...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTTCTGTGAATAAATCCTaGTCAATATCGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESSVNKS*SISEDF
Trigger: GAAGTCCTCCGATATTGATCAGGATTTATTCACAGA...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR TCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTATTGTTTATTGCTCACTaGGTTGTTGCCACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLLFIAH*VVATSA
Trigger: AGCTGAGGTGGCAACAACTCAGTGAGCAATAAACAA...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTAGAGTTTTAACCTCTTaGCGTGGATTTTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: QKGTVFFIGHALSRVTESRVLTS*RGFCLD
Trigger: ATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCT...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTCAGGGGTGTTGCTGTaGTCTTTAATGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTNKALFYTSEETPSQEVSGVLL*SLMGSS
Trigger: AGAAGACCCCATTAAAGACCACAGCAACACCCCTGA...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR CCA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTAAGAAGCCTCCTCTGGTaGTTGATAAGCAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: WWLISNSPRQRNANVLFLRSLLW*LISNSP
Trigger: TGGAGAATTGCTTATCAACCACCAGAGGAGGCTTCT...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTACATGTTGCAGAGTGTaGAGCACTTGTTCTTATCCA +
Preference number: 4 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLTCCRV*STCSYP
Trigger: TGGATAAGAACAAGTGCTGCACACTCTGCAACATGT...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGGTACATCTGTAATTaGGCCTCAGACCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LTNKALFYTSEETPSQEVWYICN*ASDLSV
Trigger: AACTGAGAGGTCTGAGGCGCAATTACAGATGTACCA...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR GCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATCACAAGAAGATGGATTaGCTATGGTCGTTAGGGACA +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDHKKMD*LWSLGT
Trigger: TGTCCCTAACGACCATAGGCAATCCATCTTCTTGTG...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp ATACAGTCGGACTTTGCTTGCATGTTTTCGACTCTTGACTTATTGACACAGCTAAGAGTTTTAACCTCTTaGCGTGGATTTTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: IQSDFACMFSTLDLLTQLRVLTS*RGFCLD
Trigger: ATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCT...TAGCTGTGTCAATAAGTCAAGAGTCGAAAACATGCAAGCAAAGTCCGACTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523542.5
CDS-3UTR CCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTAGAAGCCTCCTCTGGTaGTTGATAAGCAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTNKALFYTSEETPSQEVRSLLW*LISNSP
Trigger: TGGAGAATTGCTTATCAACCACCAGAGGAGGCTTCT...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTAATACAGTCGGACTTTaGTTGCATGTTTTCGACTCT +
Preference number: 4 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLNTVGL*LHVFDS
Trigger: AGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATT...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTACATGTTGCAGAGTGTaGAGCACTTGTTCTTATCCA +
Preference number: 4 (lower is better)
Translates to: LTNKALFYTSEETPSQEVTCCRV*STCSYP
Trigger: TGGATAAGAACAAGTGCTGCACACTCTGCAACATGT...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTaGTTTCCAAAACAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LTNKALFYTSEETPSQEVCRSAV*FPKQQN
Trigger: ATTTTGCTGTTTTGGAAAGCACACAGCCGACCTACA...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTAGAGTTTTAACCTCTTaGCGTGGATTTTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLRVLTS*RGFCLD
Trigger: ATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCT...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTTTCTTCAGGTTGGTCTaGTGTTTAGATCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLFFRLV*CLDPFR
Trigger: TCTGAAAGGATCTAAACACCAGACCAACCTGAAGAA...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR GCA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTAGTTTAGGGAGACACTaGAGATGGTACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LTNKALFYTSEETPSQEVSLGRH*RWYICN
Trigger: ATTACAGATGTACCATCTGCAGTGTCTCCCTAAACT...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CCA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATAACGGAGAAAACGACTaGTATTTATTTGTCCATTTG +
Preference number: 4 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDNGEND*YLFVHL
Trigger: CAAATGGACAAATAAATACCAGTCGTTTTCTCCGTT...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS TCA 90 bp GCTGCCCTGCCGAGCAGTAGAGCGAAGCTGTGGGCTGGAGCACGCTaGGGATTACACGTTCCTGTCTCTGCGACCAGACCTTTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: AALPSSRAKLWAGAR*GLHVPVSATRPFGS
Trigger: GCTGCCGAAAGGTCTGGTCGCAGAGACAGGAACGTGTAATCCTCAGCGTGCTCCAGCCCACAGCTTCGCTCTACTGCTCGGCAGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000523188.5
CDS-3UTR CAA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGGGCGTGGATTTTGCCTaGATAATGGGAATCGGCCAC +
Preference number: 5 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRGVDFA*IMGIGH
Trigger: GTGGCCGATTCCCATTATCAAGGCAAAATCCACGCC...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGCAGAGTGTGCAGCACTaGTTCTTATCCACCATGTCG +
Preference number: 5 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRQSVQH*FLSTMS
Trigger: CGACATGGTGGATAAGAACAAGTGCTGCACACTCTG...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TGGTCGTTAGGGACACAGGGCAGCCCCAGCCAGATCCCAGCTGGTCCATGCAGGACAGTCGGACTTTGCTaGCATGTTTTCGACTCTCGT +
Preference number: 5 (lower is better)
Translates to: WSLGTQGSPSQIPAGPCRTVGLC*HVFDSR
Trigger: ACGAGAGTCGAAAACATGCAAGCAAAGTCCGACTGT...CCTGCATGGACCAGCTGGGATCTGGCTGGGGCTGCCCTGTGTCCCTAACGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTGGCGTGGATTTTGCCTaGATAATGGGAATCGGCCAC +
Preference number: 5 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRGVDFA*IMGIGH
Trigger: GTGGCCGATTCCCATTATCAAGGCAAAATCCACGCC...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTTTGCCACCTCAGCTCTaGGTGGAAAACAGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRLPPQL*VENSGC
Trigger: ACACCCACTGTTTTCCACCAAGAGCTGAGGTGGCAA...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTTTGCTCACTGAGTTGTaGCCACCTCAGCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRLLTEL*PPQLLV
Trigger: CACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCAA...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTCAGAGTGTGCAGCACTaGTTCTTATCCACCATGTCG +
Preference number: 5 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRQSVQH*FLSTMS
Trigger: CGACATGGTGGATAAGAACAAGTGCTGCACACTCTG...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGAGTGGGCTCAGGGGTGTaGCTGTGGTCTTTAATGGGG +
Preference number: 5 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRVGSGV*LWSLMG
Trigger: CCCCATTAAAGACCACAGCAACACCCCTGAGCCCAC...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS TCA 90 bp GGACAGCCAGGTCTGCTGAGGTCAGCCACTCATCCCTTTAGGCTTTaGATGACGTCTACCATTAGGCTCTGGTTCTGGCAACTGCGTCTG +
Preference number: 5 (lower is better)
Translates to: GQPGLLRSATHPFRL*MTSTIRLWFWQLRL
Trigger: CAGACGCAGTTGCCAGAACCAGAGCCTAATGGTAGACGTCATTCAAAGCCTAAAGGGATGAGTGGCTGACCTCAGCAGACCTGGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518242.5
CDS-3UTR CAA 90 bp TTGTTCTTATCCACCATGTCGGCATCACTTCCATTTTCTGACCGGAGCCTCTTGTCTGACCGGAGCCTCTaGGCAGGACACCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: LFLSTMSASLPFSDRSLLSDRSL*AGHPPS
Trigger: GGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAGA...CAAGAGGCTCCGGTCAGAAAATGGAAGTGATGCCGACATGGTGGATAAGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CAA 90 bp AGCTCTTGGTGGAAAACAGTGGGTGTCCAGAAATTGCTGACACAAGAAGATGGATCTGACCGGAGCCTCTaGGCAGGACACCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: SSWWKTVGVQKLLTQEDGSDRSL*AGHPPS
Trigger: GGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAGA...TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCACTGTTTTCCACCAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TCCACCATGTCGGCATCACTTCCATTTTCTGACCGGAGCCTCTTGGCAGGACACCAGAGTGTGCAGCACTaGTTCTTATCCACCATGTCG +
Preference number: 5 (lower is better)
Translates to: STMSASLPFSDRSLLAGHQSVQH*FLSTMS
Trigger: CGACATGGTGGATAAGAACAAGTGCTGCACACTCTG...GTGTCCTGCCAAGAGGCTCCGGTCAGAAAATGGAAGTGATGCCGACATGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CAA 90 bp GAATCGGCCACCACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTTGCAGAGTGTGCAGCACTaGTTCTTATCCACCATGTCG +
Preference number: 5 (lower is better)
Translates to: ESATTAEVNDMLQSVQHLQSVQH*FLSTMS
Trigger: CGACATGGTGGATAAGAACAAGTGCTGCACACTCTG...CAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGTGGCCGATTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CAA 90 bp CCCAGCCAGATCCCAGCTGGTCCATGCAGGGCATCGTCAGTAGAAGCTCAACGTTTCCTAAGCTATTATTaGGCAACTTGCAAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PSQIPAGPCRASSVEAQRFLSYY*ATCKED
Trigger: GTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAA...ACGTTGAGCTTCTACTGACGATGCCCTGCATGGACCAGCTGGGATCTGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAAGTGGGTGTCCAGAAATaGCTGACACAAGAAGATGGA +
Preference number: 5 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKVGVQK*LTQEDG
Trigger: TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCAC...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TCTTGTAGAGTAGGGTGTGGCTCGTGGGGCTTCGTCTCTCTGCAGGCACAGAAATTATTGCTCACTGAGTaGTTGCCACCTCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SCRVGCGSWGFVSLQAQKLLLTE*LPPQLL
Trigger: CAAGAGCTGAGGTGGCAACAACTCAGTGAGCAATAA...TTTCTGTGCCTGCAGAGAGACGAAGCCCCACGAGCCACACCCTACTCTACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS TCA 90 bp CAGAGGGTTATTAAACCAGGCTGCACAGAGCCCACAGTATCTGTCTaGATCTCTTCTTTGATAGGGAGATGCGACCACCGGAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: QRVIKPGCTEPTVSV*ISSLIGRCDHRSSV
Trigger: GACACTGCTCCGGTGGTCGCATCTCCCTATCAAAGAAGAGATTCAGACAGATACTGTGGGCTCTGTGCAGCCTGGTTTAATAACCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297737.11
ENST00000519406.5
ENST00000519806.1
CDS-3UTR CAA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGAGTGGGTGTCCAGAAATaGCTGACACAAGAAGATGGA +
Preference number: 5 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRVGVQK*LTQEDG
Trigger: TCCATCTTCTTGTGTCAGCAATTTCTGGACACCCAC...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS GCA 90 bp CTGATCAATATCGGAGGACTTCATCAGGCTCATCCTCAACCAAAGTaGTTTCATCAGCTCATCCACGGCCTCTACACTGCTCACGTGCAA +
Preference number: 5 (lower is better)
Translates to: LINIGGLHQAHPQPK*FHQLIHGLYTAHVQ
Trigger: TTGCACGTGAGCAGTGTAGAGGCCGTGGATGAGCTGATGAAAGCACTTTGGTTGAGGATGAGCCTGATGAAGTCCTCCGATATTGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS-3UTR CAA 90 bp TCCATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGGGCGTGGATTTTGCCTaGATAATGGGAATCGGCCAC +
Preference number: 5 (lower is better)
Translates to: SIPGVKHVIQSDFACMFSGVDFA*IMGIGH
Trigger: GTGGCCGATTCCCATTATCAAGGCAAAATCCACGCC...CGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523188.5
ENST00000523542.5
CDS-3UTR CAA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCAGCCTCCTCTGGTGGTaGATAAGCAATTCTCCACGG +
Preference number: 5 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLSLLWW*ISNSPR
Trigger: CCGTGGAGAATTGCTTATCAACCACCAGAGGAGGCT...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTTCTGACCGGAGCCTCTaGGCAGGACACCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLSDRSL*AGHPPS
Trigger: GGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAGA...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CAGGGCATCGTCAGTAGAAGCTCAACGTCCCACTTCGTAACCAGGCTACAAGACCATGATACTGTTCTATaGAGTTTAGGGAGACACTGC +
Preference number: 5 (lower is better)
Translates to: QGIVSRSSTSHFVTRLQDHDTVL*SLGRHC
Trigger: GCAGTGTCTCCCTAAACTCAATAGAACAGTATCATG...GTCTTGTAGCCTGGTTACGAAGTGGGACGTTGAGCTTCTACTGACGATGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp ATGTTGCAGAGTGTGCAGCACTTGTTCTTATCCACCATGTCGGCATCACTTCCAACAGTCGGACTTTGCTaGCATGTTTTCGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: MLQSVQHLFLSTMSASLPTVGLC*HVFDWV
Trigger: GACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGT...TGGAAGTGATGCCGACATGGTGGATAAGAACAAGTGCTGCACACTCTGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523188.5
CDS-3UTR CAA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCACAGTCGGACTTTGCTaGCATGTTTTCGACTCTCGT +
Preference number: 5 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLTVGLC*HVFDSR
Trigger: ACGAGAGTCGAAAACATGCAAGCAAAGTCCGACTGT...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGACTAACAAAGCAACTCTaGCCGCATTCTTTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRLTKQL*PHSFCV
Trigger: AACACAAAAAGAATGCGGCAAGAGTTGCTTTGTTAG...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR CAA 90 bp AGAAACAGAAGAAATAGGGGACCCCGCCTAGCCCAAGGCCGCCATTTCTTCAGATACTTATTCTTCAGGTaGGTCTGGTGTTTAGATCCT +
Preference number: 5 (lower is better)
Translates to: RNRRNRGPRLAQGRHFFRYLFFR*VWCLDP
Trigger: AGGATCTAAACACCAGACCAACCTGAAGAATAAGTA...TCTGAAGAAATGGCGGCCTTGGGCTAGGCGGGGTCCCCTATTTCTTCTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCACACAAGAAGATGGATaGCCTATGGTCGTTAGGGAC +
Preference number: 5 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLTQEDG*PMVVRD
Trigger: GTCCCTAACGACCATAGGCAATCCATCTTCTTGTGT...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS TCA 90 bp ATTCGGAGATCAGCTGTGCACTGCACACCTTGCAGTAACTGTCTGTaGATAAATCCTGATCAATATCGGAGGACTTCATCAGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: IRRSAVHCTPCSNCL*INPDQYRRTSSGFR
Trigger: CCTGAAGCCTGATGAAGTCCTCCGATATTGATCAGGATTTATTCACAGACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519406.5
CDS TCA 90 bp GCAAGCTGCTGCATTACTTCATCGAAAGGAACTAGGGTGATAGAATaGGCACCTGAAATGGTATTTAGGGGTCTTAGGACAGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ASCCITSSKGTRVIE*APEMVFRGLRTARS
Trigger: AGACCTGGCTGTCCTAAGACCCCTAAATACCATTTCAGGTGCTCATTCTATCACCCTAGTTCCTTTCGATGAAGTAATGCAGCAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518242.5
CDS TCA 90 bp ATTCGGAGATCAGCTGTGCACTGCACACCTTGCAGTAACTGTCTGTaGATAAATCCTGATCAATATCGGAGGACTTCATCAGGCTCATCC +
Preference number: 5 (lower is better)
Translates to: IRRSAVHCTPCSNCL*INPDQYRRTSSGSS
Trigger: GGATGAGCCTGATGAAGTCCTCCGATATTGATCAGGATTTATTCACAGACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS GCA 90 bp CTTTCAGATGGGCATGATACTGTTCTATTGAGTTTAGGGAGACACTaGAGATGGTACATCTGTAATTGCGCCTCAGACCTCTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LSDGHDTVLLSLGRH*RWYICNCASDLSVP
Trigger: GGGAACTGAGAGGTCTGAGGCGCAATTACAGATGTACCATCTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCCATCTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS CCA 90 bp GATGGGCATGATACTGTTCTATTGAGTTTAGGGAGACACTGCAGATaGTACATCTGTAATTGCGCCTCAGACCTCTCAGTTCCCCCATAT +
Preference number: 5 (lower is better)
Translates to: DGHDTVLLSLGRHCR*YICNCASDLSVPPY
Trigger: ATATGGGGGAACTGAGAGGTCTGAGGCGCAATTACAGATGTACCATCTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS CCA 90 bp GATGGGCATGATACTGTTCTATTGAGTTTAGGGAGACACTGCAGATaGTACATCTGTAATTGCGCCTCAGACCTGTGGTCTTTAATGGGG +
Preference number: 5 (lower is better)
Translates to: DGHDTVLLSLGRHCR*YICNCASDLWSLMG
Trigger: CCCCATTAAAGACCACAGGTCTGAGGCGCAATTACAGATGTACCATCTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315769.11
CDS-3UTR CAA 90 bp CCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGTGTGCTTTCCAAAACGCTGTGAAGACGTTTTaGCCTAAGAAGATCATCATG +
Preference number: 5 (lower is better)
Translates to: PKKHHHRRFVGRLCAFQNAVKTF*PKKIIM
Trigger: CATGATGATCTTCTTAGGCAAAAACGTCTTCACAGC...GTTTTGGAAAGCACACAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp GAATCGGCCACCACCGCTGAAGTGAATGACATGTTGCAGAGTGTGCAGCACTTGTCGACTCTTGACTTATaGACACAGCTAGTTTTAAGT +
Preference number: 5 (lower is better)
Translates to: ESATTAEVNDMLQSVQHLSTLDL*TQLVLS
Trigger: ACTTAAAACTAGCTGTGTCAATAAGTCAAGAGTCGA...CAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGTGGCCGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523542.5
CDS TCA 90 bp ATTCGGAGATCAGCTGTGCACTGCACACCTTGCAGTAACTGTCTGTaGATAAATCCTGATCAATATCGGAGGACTTCATCAGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: IRRSAVHCTPCSNCL*INPDQYRRTSSGFS
Trigger: GGAAAAGCCTGATGAAGTCCTCCGATATTGATCAGGATTTATTCACAGACAGTTACTGCAAGGTGTGCAGTGCACAGCTGATCTCCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS TCA 90 bp CAAGAAGAAGAATCATTCCGATTTGTGAAAGCCGCATCTTTTCTCTaGAAGCCCAGTTTTGTGGCAGAAGTGAGAAGAGCTGCCCTTACC +
Preference number: 5 (lower is better)
Translates to: QEEESFRFVKAASFL*KPSFVAEVRRAALT
Trigger: GGTAAGGGCAGCTCTTCTCACTTCTGCCACAAAACTGGGCTTTCAGAGAAAAGATGCGGCTTTCACAAATCGGAATGATTCTTCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519806.1
CDS-3UTR CAA 90 bp TGTTCAGATGGTAAACCTGGCTCCTGTGCTTGGAGAACGGAGAAAACGACTGGTTACTTATTCTTCAGGTaGGTCTGGTGTTTAGATCCT +
Preference number: 5 (lower is better)
Translates to: CSDGKPGSCAWRTEKTTGYLFFR*VWCLDP
Trigger: AGGATCTAAACACCAGACCAACCTGAAGAATAAGTA...ACCAGTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGTTTACCATCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTAACCTGGCTCCTGTGCTaGGAGAACGGAGAAAACGAC +
Preference number: 5 (lower is better)
Translates to: WWLISNSPRQRNANVLFLTWLLC*ENGEND
Trigger: GTCGTTTTCTCCGTTCTCCAAGCACAGGAGCCAGGT...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TGCACTCAGACGCTCCCCATCAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCCTATTATTTGGCAACTaGCAAGGAGGACTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: CTQTLPIRKELFSLSVMLLLFGN*QGGLGL
Trigger: TAAGCCAAGTCCTCCTTGCAAGTTGCCAAATAATAG...GAGCATGACCGATAAAGAAAACAGTTCCTTTCTGATGGGGAGCGTCTGAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTGCATGTTTTCGACTGGGTGGACCCTTGACTTATaGACACAGCTAGTTTTAAGT +
Preference number: 5 (lower is better)
Translates to: PGVKHVIQSDFACMFSTGWTLDL*TQLVLS
Trigger: ACTTAAAACTAGCTGTGTCAATAAGTCAAGGGTCCA...CCCAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS GCA 90 bp CTTTCAGATGGGCATGATACTGTTCTATTGAGTTTAGGGAGACACTaGAGATGGTACATCTGTAATTGCGCCTCAGACCTGTGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LSDGHDTVLLSLGRH*RWYICNCASDLWSL
Trigger: TAAAGACCACAGGTCTGAGGCGCAATTACAGATGTACCATCTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCCATCTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315769.11
CDS-3UTR CAA 90 bp CCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTGTAGGTCGGCTGGCTGTGAAGACGTTTTaGCCTAAGAAGATCATCATG +
Preference number: 5 (lower is better)
Translates to: PYFTHPKKHHHRRFVGRLAVKTF*PKKIIM
Trigger: CATGATGATCTTCTTAGGCAAAAACGTCTTCACAGC...CAGCCGACCTACAAACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTACACAAGAAGATGGATaGCCTATGGTCGTTAGGGAC +
Preference number: 5 (lower is better)
Translates to: QKGTVFFIGHALSRVTESTQEDG*PMVVRD
Trigger: GTCCCTAACGACCATAGGCAATCCATCTTCTTGTGT...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp AATGAAATTCCCCTTCCTCAAGAATTCTGGACCCTTGACTTATTGACACAGCTAACAGTCGGACTTTGCTaGCATGTTTTCGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: NEIPLPQEFWTLDLLTQLTVGLC*HVFDWV
Trigger: GACCCAGTCGAAAACATGCAAGCAAAGTCCGACTGT...TAGCTGTGTCAATAAGTCAAGGGTCCAGAATTCTTGAGGAAGGGGAATTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522623.1
CDS-3UTR CAA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTCCCCCATATCCAGGGTaGTCCCCAGTTGTTCTAACA +
Preference number: 5 (lower is better)
Translates to: LTNKALFYTSEETPSQEVPPYPG*SPVVLT
Trigger: TGTTAGAACAACTGGGGACAACCCTGGATATGGGGG...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS-3UTR CAA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTAGCCTCCTCTGGTGGTaGATAAGCAATTCTCCACGG +
Preference number: 5 (lower is better)
Translates to: LTNKALFYTSEETPSQEVSLLWW*ISNSPR
Trigger: CCGTGGAGAATTGCTTATCAACCACCAGAGGAGGCT...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTTTGCTCACTGAGTTGTaGCCACCTCAGCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LTNKALFYTSEETPSQEVLLTEL*PPQLLV
Trigger: CACCAAGAGCTGAGGTGGCAACAACTCAGTGAGCAA...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp CAGAAAGGAACTGTTTTCTTTATCGGTCATGCTCTTTCCAGAGTGACTGAGTCTCTATTATTTGGCAACTaGCAAGGAGGACTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: QKGTVFFIGHALSRVTESLLFGN*QGGLGL
Trigger: TAAGCCAAGTCCTCCTTGCAAGTTGCCAAATAATAG...AGACTCAGTCACTCTGGAAAGAGCATGACCGATAAAGAAAACAGTTCCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS TCA 90 bp TTATTCTTCAGGTTGGTCTGGTGTTTAGATCCTTTCAGATGGGCATaGTACTGTTCTATTGAGTTTAGGGAGACACTGCAGATGGTACAT +
Preference number: 5 (lower is better)
Translates to: LFFRLVWCLDPFRWA*YCSIEFRETLQMVH
Trigger: ATGTACCATCTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCCATCTGAAAGGATCTAAACACCAGACCAACCTGAAGAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS TCA 90 bp CGTGCAATTTTCAGTCCTCATCTTACTTCTTATGCCAGCAGGATTTaGCCCAGCAGATCACTACTTTCTTCTGCAAAAATGCTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: RAIFSPHLTSYASRI*PSRSLLSSAKMLCL
Trigger: TAAGCAAAGCATTTTTGCAGAAGAAAGTAGTGATCTGCTGGGTCAAATCCTGCTGGCATAAGAAGTAAGATGAGGACTGAAAATTGCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS-3UTR CAA 90 bp ATGTCACCCTCAACTGTGTCCAACATGATGAGAAAAGAATGTATATTTCTGGATTTATTGCTCACTGAGTaGTTGCCACCTCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: MSPSTVSNMMRKECIFLDLLLTE*LPPQLL
Trigger: CAAGAGCTGAGGTGGCAACAACTCAGTGAGCAATAA...ATCCAGAAATATACATTCTTTTCTCATCATGTTGGACACAGTTGAGGGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TGGTGGTTGATAAGCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTAGAATGGTGCCAGATTTaGAACACAGGTAAACAGGCT +
Preference number: 5 (lower is better)
Translates to: WWLISNSPRQRNANVLFLEWCQI*NTGKQA
Trigger: AGCCTGTTTACCTGTGTTCAAAATCTGGCACCATTC...TAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGCTTATCAACCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp AGGCAGACTAATTCTTTTCCTAAGCTATTATTTGGCAACTTGCAAGGAGGACTTCATGATACTGTTCTATaGAGTTTAGGGAGACACTGC +
Preference number: 5 (lower is better)
Translates to: RQTNSFPKLLFGNLQGGLHDTVL*SLGRHC
Trigger: GCAGTGTCTCCCTAAACTCAATAGAACAGTATCATG...AAGTCCTCCTTGCAAGTTGCCAAATAATAGCTTAGGAAAAGAATTAGTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS-3UTR CAA 90 bp TTGACAAATAAAGCCTTATTTTACACATCCGAAGAAACACCATCACAGGAGGTTGAATGGTGCCAGATTTaGAACACAGGTAAACAGGCT +
Preference number: 5 (lower is better)
Translates to: LTNKALFYTSEETPSQEVEWCQI*NTGKQA
Trigger: AGCCTGTTTACCTGTGTTCAAAATCTGGCACCATTC...AACCTCCTGTGATGGTGTTTCTTCGGATGTGTAAAATAAGGCTTTATTTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS TCA 90 bp TCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTATGTCTTGATTaGTGCTTTCACTACTTATTCTTCAGGTTGGTCTGGTGTTTAGAT +
Preference number: 5 (lower is better)
Translates to: SPRQRNANVLFLCLD*CFHYLFFRLVWCLD
Trigger: ATCTAAACACCAGACCAACCTGAAGAATAAGTAGTGAAAGCATCAATCAAGACATAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS GCA 72 bp GCAGAGGGGCCGCCGGTGCCCAGAGGCCAGCTGCCCTaGCGAGCAGTAGAGCGAAGCTGTGGGCTGGAGCAC +
Preference number: 6 (lower is better)
Translates to: AEGPPVPRGQLP*RAVERSCGLEH
Trigger: GTGCTCCAGCCCACAGCTTCGCTCTACTGCTCGGCAGGGCAGCTGGCCTCTGGGCACCGGCGGCCCCTCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS GCA 72 bp GCAACCTCCTCTCCTGGTCCACCCCAATCTCCAGGCTaGTCCTGCTTCAGTCCCCATTGCTGGTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: ATSSPGPPQSPG*SCFSPHCWFLS
Trigger: GGAGAGGAACCAGCAATGGGGACTGAAGCAGGAGCAGCCTGGAGATTGGGGTGGACCAGGAGAGGAGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS CCA 72 bp ATAGGGAGATGCGACCACCGGAGCAGTGTCCATCCGTaGGGGCTTAAGTGGGCTCAGGGGTGTTGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: IGRCDHRSSVHP*GLKWAQGCCCG
Trigger: ACCACAGCAACACCCCTGAGCCCACTTAAGCCCCCACGGATGGACACTGCTCCGGTGGTCGCATCTCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297737.11
ENST00000519406.5
ENST00000519806.1
CDS TCA 72 bp CCGAGCAGTAGAGCGAAGCTGTGGGCTGGAGCACGCTaGGGATTACACGTTCCTGTCTCTGCGACCAGACCT +
Preference number: 6 (lower is better)
Translates to: PSSRAKLWAGAR*GLHVPVSATRP
Trigger: AGGTCTGGTCGCAGAGACAGGAACGTGTAATCCTCAGCGTGCTCCAGCCCACAGCTTCGCTCTACTGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
CDS GCA 72 bp GGCTGGAGCACGCTGAGGATTACACGTTCCTGTCTCTaGGACCAGACCTTTCGGCAGCTCGGACCAACTGTG +
Preference number: 6 (lower is better)
Translates to: GWSTLRITRSCL*DQTFRQLGPTV
Trigger: CACAGTTGGTCCGAGCTGCCGAAAGGTCTGGTCGCAGAGACAGGAACGTGTAATCCTCAGCGTGCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315769.11
CDS CAA 72 bp TGCGCCTCAGACCTCTCAGTTCCCCCATATCCAGGGTaGTCCCCAGTTGTTCTAACAAAGCAACTCTTGCCG +
Preference number: 6 (lower is better)
Translates to: CASDLSVPPYPG*SPVVLTKQLLP
Trigger: CGGCAAGAGTTGCTTTGTTAGAACAACTGGGGACAACCCTGGATATGGGGGAACTGAGAGGTCTGAGGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000519406.5
CDS GCA 72 bp CCTGGGGTGAAGCATGTAATACAGTCGGACTTTGCTTaGATGTTTTCGACTCTCGTAGTGGGCCACACGCTG +
Preference number: 6 (lower is better)
Translates to: PGVKHVIQSDFA*MFSTLVVGHTL
Trigger: CAGCGTGTGGCCCACTACGAGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000519406.5
CDS CCA 72 bp GGGTCTCCCCACGATCACTGTTCCTGCACGTACCTGTaGTCTTTAATGGGGTCTTCTCTCCTAGCAAGAGTT +
Preference number: 6 (lower is better)
Translates to: GSPHDHCSCTYL*SLMGSSLLARV
Trigger: AACTCTTGCTAGGAGAGAAGACCCCATTAAAGACCACAGGTACGTGCAGGAACAGTGATCGTGGGGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518242.5
CDS CAA 72 bp AGCTGCCCTTACCTCTCAGTTCCCCCATATCCAGGGTaGTCCCCAGTTGTTCTAACAAAGCAACTCTTGCCG +
Preference number: 6 (lower is better)
Translates to: SCPYLSVPPYPG*SPVVLTKQLLP
Trigger: CGGCAAGAGTTGCTTTGTTAGAACAACTGGGGACAACCCTGGATATGGGGGAACTGAGAGGTAAGGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519806.1
CDS TCA 72 bp GGTCTGCTGAGGTCAGCCACTCATCCCTTTAGGCTTTaGATGACGTCTACCATTAGGCTCTGGTTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: GLLRSATHPFRL*MTSTIRLWFWQ
Trigger: TTGCCAGAACCAGAGCCTAATGGTAGACGTCATTCAAAGCCTAAAGGGATGAGTGGCTGACCTCAGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518242.5
CDS GCA 72 bp CATCCCTGGGGTGAAGCATGTAATACAGTCGGACTTTaGTTGCATGTTTTCGACTCTCGTAGTGGGCCACAC +
Preference number: 6 (lower is better)
Translates to: HPWGEACNTVGL*LHVFDSRSGPH
Trigger: GTGTGGCCCACTACGAGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACATGCTTCACCCCAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000519406.5
CDS GCA 72 bp ATCGGAGGACTTCATCAGGCTCATCCTCAACCAAAGTaGTTTCATCAGCTCATCCACGGCCTCTACACTGCT +
Preference number: 6 (lower is better)
Translates to: IGGLHQAHPQPK*FHQLIHGLYTA
Trigger: AGCAGTGTAGAGGCCGTGGATGAGCTGATGAAAGCACTTTGGTTGAGGATGAGCCTGATGAAGTCCTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS TCA 72 bp ATTAAACCAGGCTGCACAGAGCCCACAGTATCTGTCTaGATCTCTTCTTTGATAGGGAGATGCGACCACCGG +
Preference number: 6 (lower is better)
Translates to: IKPGCTEPTVSV*ISSLIGRCDHR
Trigger: CCGGTGGTCGCATCTCCCTATCAAAGAAGAGATTCAGACAGATACTGTGGGCTCTGTGCAGCCTGGTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297737.11
ENST00000519406.5
ENST00000519806.1
CDS GCA 72 bp CTCCTAGCAAGAGTTTTAACCTCTTGGCGTGGATTTTaGCTTGATAATGGGAATCGGCCACCACCGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LLARVLTSWRGF*LDNGNRPPPLK
Trigger: CTTCAGCGGTGGTGGCCGATTCCCATTATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCTTGCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000518242.5
ENST00000519406.5
CDS CAA 90 bp AGTGAGAAGAGCTGCCCTTACCTCTCAGTTCCCCCATATCCAGGGTaGTCCCCAGTTGTTCTAACAAAGCAACTCTTGCCGCATTCTTTT +
Preference number: 6 (lower is better)
Translates to: SEKSCPYLSVPPYPG*SPVVLTKQLLPHSF
Trigger: AAAAGAATGCGGCAAGAGTTGCTTTGTTAGAACAACTGGGGACAACCCTGGATATGGGGGAACTGAGAGGTAAGGGCAGCTCTTCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519806.1
CDS CAA 90 bp ATCTGTAATTGCGCCTCAGACCTCTCAGTTCCCCCATATCCAGGGTaGTCCCCAGTTGTTCTAACAAAGCAACTCTTGCCGCATTCTTTT +
Preference number: 6 (lower is better)
Translates to: ICNCASDLSVPPYPG*SPVVLTKQLLPHSF
Trigger: AAAAGAATGCGGCAAGAGTTGCTTTGTTAGAACAACTGGGGACAACCCTGGATATGGGGGAACTGAGAGGTCTGAGGCGCAATTACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000519406.5
CDS GCA 72 bp GGGCATGATACTGTTCTATTGAGTTTAGGGAGACACTaGAGATGGTACATCTGTAATTGCGCCTCAGACCTC +
Preference number: 6 (lower is better)
Translates to: GHDTVLLSLGRH*RWYICNCASDL
Trigger: GAGGTCTGAGGCGCAATTACAGATGTACCATCTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297737.11
CDS GCA 72 bp GGGCATGATACTGTTCTATTGAGTTTAGGGAGACACTaGAGATGGTACATCTGTAATTGCGCCTCAGACCTG +
Preference number: 6 (lower is better)
Translates to: GHDTVLLSLGRH*RWYICNCASDL
Trigger: CAGGTCTGAGGCGCAATTACAGATGTACCATCTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315769.11
CDS GCA 72 bp TTCATCAGCTCATCCACGGCCTCTACACTGCTCACGTaGAATTTTCAGTCCTCATCTTACTTCTTATGCCAG +
Preference number: 6 (lower is better)
Translates to: FISSSTASTLLT*NFQSSSYFLCQ
Trigger: CTGGCATAAGAAGTAAGATGAGGACTGAAAATTGCACGTGAGCAGTGTAGAGGCCGTGGATGAGCTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS GCA 72 bp CCCAGCAGATCACTACTTTCTTCTGCAAAAATGCTTTaGTTAGTTTCTGAAGCAACCTCCTCTCCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: PSRSLLSSAKML*LVSEATSSPGP
Trigger: TGGACCAGGAGAGGAGGTTGCTTCAGAAACTAAGCAAAGCATTTTTGCAGAAGAAAGTAGTGATCTGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS GCA 72 bp AAAGTGCTTTCATCAGCTCATCCACGGCCTCTACACTaGTCACGTGCAATTTTCAGTCCTCATCTTACTTCT +
Preference number: 6 (lower is better)
Translates to: KVLSSAHPRPLH*SRAIFSPHLTS
Trigger: AGAAGTAAGATGAGGACTGAAAATTGCACGTGAGCAGTGTAGAGGCCGTGGATGAGCTGATGAAAGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS TCA 72 bp TCAGCTGTGCACTGCACACCTTGCAGTAACTGTCTGTaGATAAATCCTGATCAATATCGGAGGACTTCATCA +
Preference number: 6 (lower is better)
Translates to: SAVHCTPCSNCL*INPDQYRRTSS
Trigger: TGATGAAGTCCTCCGATATTGATCAGGATTTATTCACAGACAGTTACTGCAAGGTGTGCAGTGCACAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297737.11
ENST00000315769.11
ENST00000519406.5
ENST00000522623.1
ENST00000523188.5
ENST00000523542.5
ENST00000523823.1
CDS TCA 72 bp AGGTTGGTCTGGTGTTTAGATCCTTTCAGATGGGCATaGTACTGTTCTATTGAGTTTAGGGAGACACTGCAG +
Preference number: 6 (lower is better)
Translates to: RLVWCLDPFRWA*YCSIEFRETLQ
Trigger: CTGCAGTGTCTCCCTAAACTCAATAGAACAGTATCATGCCCATCTGAAAGGATCTAAACACCAGACCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS TCA 72 bp GAATCATTCCGATTTGTGAAAGCCGCATCTTTTCTCTaGAAGCCCAGTTTTGTGGCAGAAGTGAGAAGAGCT +
Preference number: 6 (lower is better)
Translates to: ESFRFVKAASFL*KPSFVAEVRRA
Trigger: AGCTCTTCTCACTTCTGCCACAAAACTGGGCTTTCAGAGAAAAGATGCGGCTTTCACAAATCGGAATGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519806.1
CDS CAA 72 bp CCAGGGTTGTCCCCAGTTGTTCTAACAAAGCAACTCTaGCCGCATTCTTTTTGTGTTTCTTGCCATCATAAT +
Preference number: 6 (lower is better)
Translates to: PGLSPVVLTKQL*PHSFCVSCHHN
Trigger: ATTATGATGGCAAGAAACACAAAAAGAATGCGGCAAGAGTTGCTTTGTTAGAACAACTGGGGACAACCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297737.11
ENST00000519406.5
ENST00000519806.1
CDS TCA 72 bp TGCATTACTTCATCGAAAGGAACTAGGGTGATAGAATaGGCACCTGAAATGGTATTTAGGGGTCTTAGGACA +
Preference number: 6 (lower is better)
Translates to: CITSSKGTRVIE*APEMVFRGLRT
Trigger: TGTCCTAAGACCCCTAAATACCATTTCAGGTGCTCATTCTATCACCCTAGTTCCTTTCGATGAAGTAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518242.5
CDS CAA 90 bp ACGTGCAATTTTCAGTCCTCATCTTACTTCTTATGCCAGCAGGATTaGACCCAGCAGATCACTACTTTCTTCTGCAAAAATGCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: TCNFQSSSYFLCQQD*TQQITTFFCKNALL
Trigger: AAGCAAAGCATTTTTGCAGAAGAAAGTAGTGATCTGCTGGGTCAAATCCTGCTGGCATAAGAAGTAAGATGAGGACTGAAAATTGCACGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523823.1
CDS CAA 90 bp GCAATTCTCCACGGCAGAGAAATGCTAATGTTTTGTTCTTATGTCTaGATTGATGCTTTCACTACTTATTCTTCAGGTTGGTCTGGTGTT +
Preference number: 6 (lower is better)
Translates to: AILHGREMLMFCSYV*IDAFTTYSSGWSGV
Trigger: AACACCAGACCAACCTGAAGAATAAGTAGTGAAAGCATCAATCAAGACATAAGAACAAAACATTAGCATTTCTCTGCCGTGGAGAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11
CDS CAA 72 bp CACGGCAGAGAAATGCTAATGTTTTGTTCTTATGTCTaGATTGATGCTTTCACTACTTATTCTTCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: HGREMLMFCSYV*IDAFTTYSSGW
Trigger: CCAACCTGAAGAATAAGTAGTGAAAGCATCAATCAAGACATAAGAACAAAACATTAGCATTTCTCTGCCGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297737.11
ENST00000315769.11