RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZKSCAN8 (Homo sapiens)

Ensembl gene IDs: ENSG00000198315

Ensembl transcript IDs: ENST00000330236.7, ENST00000457389.6, ENST00000536028.2, ENST00000606198.5

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATAAGTGCTGAGGCAGCACAGAATGAGGGAGGTCATCGCATGAGGTaGTGTCAATCAGGGAGAGCTCAGTCAGAAGATATAAAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: ISAEAAQNEGGHRMR*CQSGRAQSEDIKEE
Trigger: TTCTTCCTTTATATCTTCTGACTGAGCTCTCCCTGATTGACATCACCTCATGCGATGACCTCCCTCATTCTGTGCTGCCTCAGCACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 90 bp TGTTTGGGAATCAACCACCATATTCTAGCACTGCACCTTGCTCCATaGAGAAAATCTCTGAAACCTAACATGCCTCTCCCAGGGCTATGT +
Preference number: 1 (lower is better)
Translates to: CLGINHHILALHLAP*RKSLKPNMPLPGLC
Trigger: ACATAGCCCTGGGAGAGGCATGTTAGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTTGATTCCCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 90 bp CTGATAACATCCCCGTTGCATTTGGCAGCTGTCTCTCCATGTGGCTaGATTCCAGTAGATATTACCTGTTTTGAAGCTAATTCCCTGTTC +
Preference number: 1 (lower is better)
Translates to: LITSPLHLAAVSPCG*IPVDITCFEANSLF
Trigger: GAACAGGGAATTAGCTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR GCA 90 bp TTAAACGCCTACTATGTGCTCAGCACTATACTAGGCACTCGGGGGTaGAGAGATACAAATGTAAAAGTTATTATTCCTGCCCTCAAGGAG +
Preference number: 1 (lower is better)
Translates to: LNAYYVLSTILGTRG*RDTNVKVIIPALKE
Trigger: CTCCTTGAGGGCAGGAATAATAACTTTTACATTTGTATCTCTGCACCCCCGAGTGCCTAGTATAGTGCTGAGCACATAGTAGGCGTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR TCA 90 bp AAGTCACCAAAATGTATAACTATCCAAGCTCAAGAGCAGCTGGGCTaGGTCTCCACTCACCTCTTTCTCTGTATTACTCCCATAACCATT +
Preference number: 1 (lower is better)
Translates to: KSPKCITIQAQEQLG*VSTHLFLCITPITI
Trigger: AATGGTTATGGGAGTAATACAGAGAAAGAGGTGAGTGGAGACTCAGCCCAGCTGCTCTTGAGCTTGGATAGTTATACATTTTGGTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR GCA 90 bp GTGAATAAGTCTCACAAGATCGGACGGTTTTATAAAGAGTTCCCCTaGACAAGTTCTCTCTTTGCCTGCTGCCATCCATGTATAAGACAT +
Preference number: 1 (lower is better)
Translates to: VNKSHKIGRFYKEFP*TSSLFACCHPCIRH
Trigger: ATGTCTTATACATGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCGTCCGATCTTGTGAGACTTATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR TCA 90 bp CCTAACATGCCTCTCCCAGGGCTATGTTGGATGGCATTAGAGTTATaGAAGAACCACCTTATCATGTCAGTTCCTAAAATGAGAAGCTTA +
Preference number: 1 (lower is better)
Translates to: PNMPLPGLCWMALEL*KNHLIMSVPKMRSL
Trigger: TAAGCTTCTCATTTTAGGAACTGACATGATAAGGTGGTTCTTTCATAACTCTAATGCCATCCAACATAGCCCTGGGAGAGGCATGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 90 bp CCACTGTGGATATTAAAGTCATATAAACTAATGGCAAGAAACAGATaGAGAATAACGAGTGAGGTGCTGAGGCCATCTAAAGAGATGGGT +
Preference number: 1 (lower is better)
Translates to: PLWILKSYKLMARNR*RITSEVLRPSKEMG
Trigger: ACCCATCTCTTTAGATGGCCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGACTTTAATATCCACAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 90 bp AAGAACCACCTTATCATGTCAGTTCCTAAAATGAGAAGCTTAGGATaGGAGGAGAAAGTACTGATGAATAGTTCATTTCAGATGAACATA +
Preference number: 1 (lower is better)
Translates to: KNHLIMSVPKMRSLG*EEKVLMNSSFQMNI
Trigger: TATGTTCATCTGAAATGAACTATTCATCAGTACTTTCTCCTCCCATCCTAAGCTTCTCATTTTAGGAACTGACATGATAAGGTGGTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CAA 90 bp AGGTCTCGGGCTTCTTCATGCTCAAGACCCCTGATAACATCCCCGTaGCATTTGGCAGCTGTCTCTCCATGTGGCTGGATTCCAGTAGAT +
Preference number: 2 (lower is better)
Translates to: RSRASSCSRPLITSP*HLAAVSPCGWIPVD
Trigger: ATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGAAGCCCGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR-3UTR CCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTGGGGATCACAGGAGATaGGAAGAAGCACAGGAACTA +
Preference number: 2 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIGDHRR*EEAQEL
Trigger: TAGTTCCTGTGCTTCTTCCCATCTCCTGTGATCCCC...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CAA 90 bp TGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCAGATG +
Preference number: 2 (lower is better)
Translates to: WLSLVTLGALEIYVG*PQIGAEYLEALVQM
Trigger: CATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR CAA 90 bp CGGGCTTCTTCATGCTCAAGACCCCTGATAACATCCCCGTTGCATTaGGCAGCTGTCTCTCCATGTGGCTGGATTCCAGTAGATATTACC +
Preference number: 2 (lower is better)
Translates to: RASSCSRPLITSPLH*AAVSPCGWIPVDIT
Trigger: GGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGAAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCTGTTGGAAACCAACATaGCAAGTGATGGGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: RHDLLLLAFHHDCEASPACWKPT*QVMGVF
Trigger: GAAGACACCCATCACTTGTCATGTTGGTTTCCAACA...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCCTGCACCTTGCTCCATaGAGAAAATCTCTGAAACCT +
Preference number: 2 (lower is better)
Translates to: RHDLLLLAFHHDCEASPALHLAP*RKSLKP
Trigger: AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAG...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCAGTGAAGGTGATACATaGAGAAAAATGCTGGAGTGC +
Preference number: 2 (lower is better)
Translates to: RHDLLLLAFHHDCEASPASEGDT*RKMLEC
Trigger: GCACTCCAGCATTTTTCTTCATGTATCACCTTCACT...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTCATGGAGAAAATCTCTaGAACCTAACATGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIHGENL*NLTCLS
Trigger: GGAGAGGCATGTTAGGTTTCAGAGATTTTCTCCATG...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGCATGGCTCTCTCTTGTaGCTCTTGGGGCACTGGAGA +
Preference number: 2 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLHGSLL*LLGHWR
Trigger: TCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATG...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CCA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATAAGCTCAAGAGCAGCTaGGCTGAGTCTCCACTCACC +
Preference number: 2 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYKLKSS*AESPLT
Trigger: GGTGAGTGGAGACTCAGCCCAGCTGCTCTTGAGCTT...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGAGAAGCTTAGGATaGGAGGAGAAAGTACTGATG +
Preference number: 2 (lower is better)
Translates to: RHDLLLLAFHHDCEASPAMRSLG*EEKVLM
Trigger: CATCAGTACTTTCTCCTCCCATCCTAAGCTTCTCAT...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp GAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCTCTTTGGAGCTGAGTATTTaGAGGCTCTGGTGCAGATGC +
Preference number: 2 (lower is better)
Translates to: ELPFWERVGLWEVDMALSLELSI*RLWCRC
Trigger: GCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAA...AGAGAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR TCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTTGTACAGATGCTCAATaGCTCAATGGAGTCAGTGAA +
Preference number: 2 (lower is better)
Translates to: LPSTMIVRRPQPCGTESICTDAQ*LNGVSE
Trigger: TTCACTGACTCCATTGAGTCATTGAGCATCTGTACA...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCAGGATAGTCACAGGGTaGAATTATGAAGCTTTCATC +
Preference number: 2 (lower is better)
Translates to: RHDLLLLAFHHDCEASPARIVTG*NYEAFI
Trigger: GATGAAAGCTTCATAATTTCACCCTGTGACTATCCT...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCCATATATTTTCCCTCTaGCAATGCACCCATCATATG +
Preference number: 2 (lower is better)
Translates to: RHDLLLLAFHHDCEASPAHIFSL*QCTHHM
Trigger: CATATGATGGGTGCATTGTCAGAGGGAAAATATATG...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp TCAATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCGCCTCAGATTGGAGCTaGGTATTTGGAGGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: SIFSKVWNPAVRSVAVISASDWS*VFGGSG
Trigger: ACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGC...GGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR GCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCGGATTACAGATGGAGTaGACCAGAGTTCAAAAGAAT +
Preference number: 2 (lower is better)
Translates to: RHDLLLLAFHHDCEASPAGLQME*TRVQKN
Trigger: ATTCTTTTGAACTCTGGTGCACTCCATCTGTAATCC...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTATGGCAAGAAACAGATaGAGAATAACGAGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIMARNR*RITSEV
Trigger: CACCTCACTCGTTATTCTCCATCTGTTTCTTGCCAT...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGCCTTCACCAAGGCACTaGGCCCAAATTACTAAAGAG +
Preference number: 2 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVPSPRH*AQITKE
Trigger: CTCTTTAGTAATTTGGGCCCAGTGCCTTGGTGAAGG...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp TCAATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTTGGAGCTGAGTATTTaGAGGCTCTGGTGCAGATGC +
Preference number: 2 (lower is better)
Translates to: SIFSKVWNPAVRSVAVISLELSI*RLWCRC
Trigger: GCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAA...GGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CCA 90 bp GAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCTCTACTGGAGATTTATGTTaGGTTGCCTCAGATTGGAGC +
Preference number: 2 (lower is better)
Translates to: ELPFWERVGLWEVDMALSTGDLC*VASDWS
Trigger: GCTCCAATCTGAGGCAACCCAACATAAATCTCCAGT...AGAGAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGGAACGAGTAGGACTCTaGGAAGTAGACATGGCTCTC +
Preference number: 2 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLERVGL*EVDMAL
Trigger: GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTC...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR TCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGCAAGAGCAGCTGGGCTaGGTCTCCACTCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: SYKLMARNRWRITSEVLRQEQLG*VSTHLF
Trigger: AAAGAGGTGAGTGGAGACTCAGCCCAGCTGCTCTTG...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTATGGCATTAGAGTTATaGAAGAACCACCTTATCATG +
Preference number: 2 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIMALEL*KNHLIM
Trigger: CATGATAAGGTGGTTCTTTCATAACTCTAATGCCAT...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR GCA 90 bp GCAGCTGTCTCTCCATGTGGCTGGATTCCAGTAGATATTACCTGTTTTGAAGCTCAAAGTCTGGAACCCTaGTGTGAGAAGTGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: AAVSPCGWIPVDITCFEAQSLEP*CEKCSC
Trigger: ACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTG...AGCTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR-3UTR CCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTTGTTGCTCTGGTCTATaGCCATACCACCCTGAATGC +
Preference number: 2 (lower is better)
Translates to: NHHILALHLAPWRKSLKPCCSGL*PYHPEC
Trigger: GCATTCAGGGTGGTATGGCCATAGACCAGAGCAACA...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp GCAGCTGTCTCTCCATGTGGCTGGATTCCAGTAGATATTACCTGTTTTGAAGCTTGCCTTTTAGTACACTaGAAGACCTCTCACCAGTGT +
Preference number: 2 (lower is better)
Translates to: AAVSPCGWIPVDITCFEACLLVH*KTSHQC
Trigger: ACACTGGTGAGAGGTCTTTCAGTGTACTAAAAGGCA...AGCTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR-3UTR TCA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGGTCCACTTTCTTTACTaGCACAGGTGCTGGGACTGG +
Preference number: 2 (lower is better)
Translates to: EQALESNCVGQNQFYHILVHFLY*HRCWDW
Trigger: CCAGTCCCAGCACCTGTGTCAGTAAAGAAAGTGGAC...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTTTCAATGTGTTGCTCTaGTCTATGGCCATACCACCC +
Preference number: 2 (lower is better)
Translates to: NHHILALHLAPWRKSLKPFNVLL*SMAIPP
Trigger: GGGTGGTATGGCCATAGACCAGAGCAACACATTGAA...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR GCA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATTGGGCACATAGTAAGTaGTCAATAAACGTCGGCTAT +
Preference number: 2 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYWAHSK*SINVGY
Trigger: ATAGCCGACGTTTATTGAGCACTTACTATGTGCCCA...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR GCA 90 bp TCAATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCAGATTTATGTTGGGTTaGCTCAGATTGGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: SIFSKVWNPAVRSVAVISRFMLG*LRLELS
Trigger: ACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT...GGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGCTTCAAGGGAATAAATaGGAGAGGGGGATCACAGGA +
Preference number: 2 (lower is better)
Translates to: SYKLMARNRWRITSEVLRLQGNK*ERGITG
Trigger: TCCTGTGATCCCCCTCTCCCATTTATTCCCTTGAAG...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp CGTCGGCTATTATTATTTGGAGACTCAGAACCAAGAGTAAAGTTAACTGCTCTGTGCCTTTTAGTACACTaGAAGACCTCTCACCAGTGT +
Preference number: 2 (lower is better)
Translates to: RRLLLFGDSEPRVKLTALCLLVH*KTSHQC
Trigger: ACACTGGTGAGAGGTCTTTCAGTGTACTAAAAGGCA...CAGAGCAGTTAACTTTACTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR TCA 90 bp CGTCGGCTATTATTATTTGGAGACTCAGAACCAAGAGTAAAGTTAACTGCTCTGAGGCTGTTAAGAACCTaGGAAAGCAGTATTGTAATG +
Preference number: 2 (lower is better)
Translates to: RRLLLFGDSEPRVKLTALRLLRT*ESSIVM
Trigger: CATTACAATACTGCTTTCTCAGGTTCTTAACAGCCT...CAGAGCAGTTAACTTTACTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp AAAAATGGGTGTTTGAGGAGGATCGTCTTTGAAAAATTATCTACTGGGTGTTACCCTATTGATATGGTTTaGCTGTGTCCCATCCAAATC +
Preference number: 2 (lower is better)
Translates to: KNGCLRRIVFEKLSTGCYPIDMV*LCPIQI
Trigger: GATTTGGATGGGACACAGCCAAACCATATCAATAGG...GTAACACCCAGTAGATAATTTTTCAAAGACGATCCTCCTCAAACACCCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR GCA 90 bp AAAAATGGGTGTTTGAGGAGGATCGTCTTTGAAAAATTATCTACTGGGTGTTACTACATTTCAATGTGTTaGTCTGGTCTATGGCCATAC +
Preference number: 2 (lower is better)
Translates to: KNGCLRRIVFEKLSTGCYYISMC*SGLWPY
Trigger: GTATGGCCATAGACCAGAGCAACACATTGAAATGTA...GTAACACCCAGTAGATAATTTTTCAAAGACGATCCTCCTCAAACACCCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp CGTCGGCTATTATTATTTGGAGACTCAGAACCAAGAGTAAAGTTAACTGCTCTGCATTCTGAGTTTGTATaGGAATACAAATTTCCACTG +
Preference number: 2 (lower is better)
Translates to: RRLLLFGDSEPRVKLTALHSEFV*EYKFPL
Trigger: CAGTGGAAATTTGTATTCCCATACAAACTCAGAATG...CAGAGCAGTTAACTTTACTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CCA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGGTCTTCATTCACCAATaGCTCAATGAAATTGATGTA +
Preference number: 2 (lower is better)
Translates to: EQALESNCVGQNQFYHILVFIHQ*LNEIDV
Trigger: TACATCAATTTCATTGAGCCATTGGTGAATGAAGAC...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 72 bp CTCCCACAATTCCCACGTGTCGTGGGTGGGACCAAGTaGGAGGTAATTGAATCACGGGGGCAGAACTTTCCT +
Preference number: 3 (lower is better)
Translates to: LPQFPRVVGGTK*EVIESRGQNFP
Trigger: AGGAAAGTTCTGCCCCCGTGATTCAATTACCTCCCACTTGGTCCCACCCACGACACGTGGGAATTGTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR TCA 72 bp GTGCTGAGGCAGCACAGAATGAGGGAGGTCATCGCATaGGGTGATGTCAATCAGGGAGAGCTCAGTCAGAAG +
Preference number: 3 (lower is better)
Translates to: VLRQHRMREVIA*GDVNQGELSQK
Trigger: CTTCTGACTGAGCTCTCCCTGATTGACATCACCTCATGCGATGACCTCCCTCATTCTGTGCTGCCTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR GCA 72 bp TCTCTTGTGTGGGATTTCCCCGCTGCCTCTCTAATCTaGCCAGAAGGTCTCGGGCTTCTTCATGCTCAAGAC +
Preference number: 3 (lower is better)
Translates to: SLVWDFPAASLI*PEGLGLLHAQD
Trigger: GTCTTGAGCATGAAGAAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCAGCGGGGAAATCCCACACAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR GCA 72 bp CATTTATGTCGTCTCTCTTGTGTGGGATTTCCCCGCTaGCTCTCTAATCTGCCCAGAAGGTCTCGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: HLCRLSCVGFPR*LSNLPRRSRAS
Trigger: AGAAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCAGCGGGGAAATCCCACACAAGAGAGACGACATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR GCA 72 bp CTCTCTAATCTGCCCAGAAGGTCTCGGGCTTCTTCATaGTCAAGACCCCTGATAACATCCCCGTTGCATTTG +
Preference number: 3 (lower is better)
Translates to: LSNLPRRSRASS*SRPLITSPLHL
Trigger: CAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGAAGCCCGAGACCTTCTGGGCAGATTAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR TCA 72 bp GAGGCAGCACAGAATGAGGGAGGTCATCGCATGAGGTaGTGTCAATCAGGGAGAGCTCAGTCAGAAGATATA +
Preference number: 3 (lower is better)
Translates to: EAAQNEGGHRMR*CQSGRAQSEDI
Trigger: TATATCTTCTGACTGAGCTCTCCCTGATTGACATCACCTCATGCGATGACCTCCCTCATTCTGTGCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 72 bp CTCTGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTaGGGCACTGGAGATTTATGTTGGGTTGCCTCAGAT +
Preference number: 3 (lower is better)
Translates to: LWEVDMALSCDS*GTGDLCWVASD
Trigger: ATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR CCA 72 bp TCTCCAGAACTTCCTTTCTGGGAACGAGTAGGACTCTaGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGG +
Preference number: 3 (lower is better)
Translates to: SPELPFWERVGL*EVDMALSCDSW
Trigger: CCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CAA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTGTCGGCTATTATTATTaGGAGACTCAGAACCAAGAG +
Preference number: 3 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIVGYYY*ETQNQE
Trigger: CTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGAC...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CAA 90 bp TGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATG +
Preference number: 3 (lower is better)
Translates to: WEVDMALSCDSWGTGDLCIGAEY*EALVQM
Trigger: CATCTGCACCAGAGCCTCCAAATACTCAGCTCCAAT...ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CAA 90 bp GAAGCTAATTCCCTGTTCTCACTCCTGGTCTCACCACCCAGGGAGAACATGTTTGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAG +
Preference number: 3 (lower is better)
Translates to: EANSLFSLLVSPPRENMFEIYVG*PQIGAE
Trigger: CTCAGCTCCAATCTGAGGCAACCCAACATAAATCTC...AAACATGTTCTCCCTGGGTGGTGAGACCAGGAGTGAGAACAGGGAATTAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR TCA 72 bp GATATGGTTTGGCTGTGTCCCATCCAAATCTCATCTTaGATTGTAGCTCCCACAATTCCCACGTGTCGTGGG +
Preference number: 3 (lower is better)
Translates to: DMVWLCPIQISS*IVAPTIPTCRG
Trigger: CCCACGACACGTGGGAATTGTGGGAGCTACAATTCAAGATGAGATTTGGATGGGACACAGCCAAACCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CAA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATG +
Preference number: 3 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLIGAEY*EALVQM
Trigger: CATCTGCACCAGAGCCTCCAAATACTCAGCTCCAAT...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CAA 90 bp TCAATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTTGGGTTGCCTCAGATaGGAGCTGAGTATTTGGAGG +
Preference number: 3 (lower is better)
Translates to: SIFSKVWNPAVRSVAVISLGCLR*ELSIWR
Trigger: CCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAA...GGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR CCA 72 bp TCCCCGTTGCATTTGGCAGCTGTCTCTCCATGTGGCTaGATTCCAGTAGATATTACCTGTTTTGAAGCTAAT +
Preference number: 3 (lower is better)
Translates to: SPLHLAAVSPCG*IPVDITCFEAN
Trigger: ATTAGCTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR-3UTR CAA 90 bp GTCTCTCCATGTGGCTGGATTCCAGTAGATATTACCTGTTTTGAAGCTAATTCCCACTGGAGATTTATGTaGGGTTGCCTCAGATTGGAG +
Preference number: 3 (lower is better)
Translates to: VSPCGWIPVDITCFEANSHWRFM*GCLRLE
Trigger: CTCCAATCTGAGGCAACCCAACATAAATCTCCAGTG...GGAATTAGCTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR GCA 72 bp TATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTaGTGCCATCCATGTATAAGACATGATTTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: YKEFPCTSSLFA*CHPCIRHDLLL
Trigger: GAGGAGCAAATCATGTCTTATACATGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 72 bp CAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTaGCTGGGTGATATTGGTCAGCTCACTCAACTAAGC +
Preference number: 3 (lower is better)
Translates to: QTVWVRISFITY*LGDIGQLTQLS
Trigger: GCTTAGTTGAGTGAGCTGACCAATATCACCCAGCCAGTATGTGATAAAACTGATTCTGACCCACACAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CAA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGATGATTTGCTCCTCCTaGCCTTCCACCATGATTGTG +
Preference number: 3 (lower is better)
Translates to: EQALESNCVGQNQFYHILMICSS*PSTMIV
Trigger: CACAATCATGGTGGAAGGCAAGGAGGAGCAAATCAT...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CAA 90 bp CTGAAATTTTCTGGCCTGTTATCTCTACACAGATCCTTCTGTGATGGATCAAGAGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAG +
Preference number: 3 (lower is better)
Translates to: LKFSGLLSLHRSFCDGSREIYVG*PQIGAE
Trigger: CTCAGCTCCAATCTGAGGCAACCCAACATAAATCTC...TCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
3UTR-3UTR CAA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATCACAGCCTTTTTCTATaGTCTTATACCATTTGGCTA +
Preference number: 3 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYHSLFL*SYTIWL
Trigger: TAGCCAAATGGTATAAGACAATAGAAAAAGGCTGTG...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CAA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATGCTAAGAGTGTGAACTaGAGACAAAGAATGATTTCT +
Preference number: 3 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYAKSVN*RQRMIS
Trigger: AGAAATCATTCTTTGTCTCAAGTTCACACTCTTAGC...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR TCA 72 bp ATAAAGGATAATCGAAAGGACTGTTGGAAACCAACATaGCAAGTGATGGGTGTCTTCATTCACCAATGGCTC +
Preference number: 3 (lower is better)
Translates to: IKDNRKDCWKPT*QVMGVFIHQWL
Trigger: GAGCCATTGGTGAATGAAGACACCCATCACTTGTCATGTTGGTTTCCAACAGTCCTTTCGATTATCCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR TCA 72 bp ATAATCGAAAGGACTGTTGGAAACCAACATGACAAGTaGTGGGTGTCTTCATTCACCAATGGCTCAATGAAA +
Preference number: 3 (lower is better)
Translates to: IIERTVGNQHDK*WVSSFTNGSMK
Trigger: TTTCATTGAGCCATTGGTGAATGAAGACACCCATCACTTGTCATGTTGGTTTCCAACAGTCCTTTCGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CAA 90 bp AAAAATGGGTGTTTGAGGAGGATCGTCTTTGAAAAATTATCTACTGGGTGTTACATACATTTCAATGTGTaGCTCTGGTCTATGGCCATA +
Preference number: 3 (lower is better)
Translates to: KNGCLRRIVFEKLSTGCYIHFNV*LWSMAI
Trigger: TATGGCCATAGACCAGAGCAACACATTGAAATGTAT...GTAACACCCAGTAGATAATTTTTCAAAGACGATCCTCCTCAAACACCCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR-3UTR CAA 90 bp AAAAATGGGTGTTTGAGGAGGATCGTCTTTGAAAAATTATCTACTGGGTGTTACCATCCAAATCTCATCTaGAATTGTAGCTCCCACAAT +
Preference number: 3 (lower is better)
Translates to: KNGCLRRIVFEKLSTGCYHPNLI*NCSSHN
Trigger: ATTGTGGGAGCTACAATTCAAGATGAGATTTGGATG...GTAACACCCAGTAGATAATTTTTCAAAGACGATCCTCCTCAAACACCCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CCA 72 bp ATAACAAGTGACAACCCACATTGGATGCGTAAGTTCTaGCATGTTACTTTAAACCAGTCTCATTACTTTATA +
Preference number: 3 (lower is better)
Translates to: ITSDNPHWMRKF*HVTLNQSHYFI
Trigger: TATAAAGTAATGAGACTGGTTTAAAGTAACATGCCAGAACTTACGCATCCAATGTGGGTTGTCACTTGTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp GCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTAGAGGCGCCCCGTCGTaGGGAAGGGAGGCTGCAACG +
Preference number: 4 (lower is better)
Translates to: ALEIYVGLPQIGAEYLEARGAPS*GREAAT
Trigger: CGTTGCAGCCTCCCTTCCCCACGACGGGGCGCCTCT...AGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCCAAGAGCAGCTGGGCTaGGTCTCCACTCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPAQEQLG*VSTHLF
Trigger: AAAGAGGTGAGTGGAGACTCAGCCCAGCTGCTCTTG...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp GGACTCTGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATGTCGTCTCTCTTGTGTaGGATTTCCCCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLWEVDMALSCDSWGTGDVVSLV*DFPAAS
Trigger: AGAGGCAGCGGGGAAATCCCACACAAGAGAGACGAC...ATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp GAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCTCTGGTAGCGTAACTGCCTaGAGCGCAGGCGGAACACTT +
Preference number: 4 (lower is better)
Translates to: ELPFWERVGLWEVDMALSGSVTA*SAGGTL
Trigger: AAGTGTTCCGCCTGCGCTTCAGGCAGTTACGCTACC...AGAGAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp TGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTCTGGCCTCAGCCACTaGTGGCAAAGGGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: WEVDMALSCDSWGTGDLCSGLSH*WQRARS
Trigger: ACTACGGGCCCTTTGCCATCAGTGGCTGAGGCCAGA...ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCTATTGTCATCCTAACTaGCCATCTGCCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPAYCHPN*PSAWPG
Trigger: ACCAGGCCAGGCAGATGGTCAGTTAGGATGACAATA...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp ATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCAGATGCGCTGCCTCTCTAATCTaGCCAGAAGGTCTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: MLGCLRLELSIWRLWCRCAASLI*PEGLGL
Trigger: AAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCAGC...GCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CCA 90 bp CTAGTCAGGGAGTTTGCACAGGCTGTTAAGAACCTGAGAAAGCAGTATTGTAATAGAGGCGCCCCGTCGTaGGGAAGGGAGGCTGCAACG +
Preference number: 4 (lower is better)
Translates to: LVREFAQAVKNLRKQYCNRGAPS*GREAAT
Trigger: CGTTGCAGCCTCCCTTCCCCACGACGGGGCGCCTCT...ATTACAATACTGCTTTCTCAGGTTCTTAACAGCCTGTGCAAACTCCCTGACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCTCCTTAACCAGTGTCTaGAGCTCCTCAGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPASLTSV*SSSGRM
Trigger: CATCCTACCTGAGGAGCTCCAGACACTGGTTAAGGA...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp GAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCTCTCCCTGTTCTCACTCCTaGTCTCACCACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ELPFWERVGLWEVDMALSPCSHS*SHHPGR
Trigger: TCTCCCTGGGTGGTGAGACCAGGAGTGAGAACAGGG...AGAGAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp AGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCGGTAGCGTAACTGCCTaGAGCGCAGGCGGAACACTT +
Preference number: 4 (lower is better)
Translates to: RFMLGCLRLELSIWRLWCGSVTA*SAGGTL
Trigger: AAGTGTTCCGCCTGCGCTTCAGGCAGTTACGCTACC...GCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACATCTGGCCTCAGCCACTaGTGGCAAAGGGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTSGLSH*WQRARS
Trigger: ACTACGGGCCCTTTGCCATCAGTGGCTGAGGCCAGA...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCTCTCCGTTCTCTAGCTaGTGTTCCTTAACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPASPFSS*CSLTSV
Trigger: GACACTGGTTAAGGAACATCAGCTAGAGAACGGAGA...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTCACATACTGGCTGGGTaGTATTGGTCAGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIHILAG*YWSAHS
Trigger: TGAGTGAGCTGACCAATATCACCCAGCCAGTATGTG...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCTCTCGGGCTTCTTCATaGTCAAGACCCCTGATAACA +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPASRASS*SRPLIT
Trigger: TGTTATCAGGGGTCTTGAGCATGAAGAAGCCCGAGA...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp ACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAAAGGGCCCGTAGTTaGATCAGAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TWLSLVTLGALEIYVGLPQRARS*IRASRG
Trigger: ACCCCGAGAAGCTCTGATCCAACTACGGGCCCTTTG...AGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCACCCTGTTCTCACTCCTaGTCTCACCACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPPCSHS*SHHPGR
Trigger: TCTCCCTGGGTGGTGAGACCAGGAGTGAGAACAGGG...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTTGTTGCTCTGGTCTATaGCCATACCACCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: LPSTMIVRRPQPCGTESICCSGL*PYHPEC
Trigger: GCATTCAGGGTGGTATGGCCATAGACCAGAGCAACA...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp GGACTCTGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATAAGAGAAGACTCTTCTaGGGGCCTCTTTCTAAGGGT +
Preference number: 4 (lower is better)
Translates to: GLWEVDMALSCDSWGTGDKRRLF*GPLSKG
Trigger: ACCCTTAGAAAGAGGCCCTCAGAAGAGTCTTCTCTT...ATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp GCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATCTCTGGTGCAGATGCTaGATGTACTACCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALSCDSWGTGDLCWVASDLWCRC*MYYLLP
Trigger: TGGGAGGAGGTAGTACATTCAGCATCTGCACCAGAG...ATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp GCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATGCCTCAGATTGGAGCTaGGTATTTGGAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ALSCDSWGTGDLCWVASDASDWS*VFGGSG
Trigger: ACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGC...ATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp CACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCCATGGCTCTCTCTTGTaGCTCTTGGGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: HWRFMLGCLRLELSIWRLHGSLL*LLGHWR
Trigger: TCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATG...GAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTCCAAAAGTCACAAACTaGCCCACAGGGTGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIPKVTN*PTGWEK
Trigger: TTTTTCCCACCCTGTGGGTCAGTTTGTGACTTTTGG...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGGCTGCCTCTCTAATCTaGCCAGAAGGTCTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVAASLI*PEGLGL
Trigger: AAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCAGC...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAGAGGCGCCCCGTCGTaGGGAAGGGAGGCTGCAACG +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVRGAPS*GREAAT
Trigger: CGTTGCAGCCTCCCTTCCCCACGACGGGGCGCCTCT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CCAGAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCGAACGAGTAGGACTCTaGGAAGTAGACATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PELPFWERVGLWEVDMALERVGL*EVDMAL
Trigger: GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTC...GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCGTCTCTCCATGTGGCTaGATTCCAGTAGATATTACC +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPAVSPCG*IPVDIT
Trigger: GGTAATATCTACTGGAATCCAGCCACATGGAGAGAC...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTCCTTCACCAAGGCACTaGGCCCAAATTACTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIPSPRH*AQITKE
Trigger: CTCTTTAGTAATTTGGGCCCAGTGCCTTGGTGAAGG...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCAAAGCTCAAGAGCAGCTaGGCTGAGTCTCCACTCACC +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPKLKSS*AESPLT
Trigger: GGTGAGTGGAGACTCAGCCCAGCTGCTCTTGAGCTT...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTGCCTGGCCTGGTACATaGATATTTCATTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIAWPGT*IFHFPP
Trigger: TGGAGGGAAATGAAATATCCATGTACCAGGCCAGGC...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CAA 72 bp TCATGCTCAAGACCCCTGATAACATCCCCGTTGCATTaGGCAGCTGTCTCTCCATGTGGCTGGATTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SCSRPLITSPLH*AAVSPCGWIPV
Trigger: TACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
3UTR CAA 72 bp GCTTCTTCATGCTCAAGACCCCTGATAACATCCCCGTaGCATTTGGCAGCTGTCTCTCCATGTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: ASSCSRPLITSP*HLAAVSPCGWI
Trigger: AATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp GCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTCTGGTGCAGATGCTaGATGTACTACCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALEIYVGLPQIGAEYLEALWCRC*MYYLLP
Trigger: TGGGAGGAGGTAGTACATTCAGCATCTGCACCAGAG...AGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp CCAGAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCACACAGATCCTTCTGTaGTGGATCAAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: PELPFWERVGLWEVDMALTQILL*WIKKPL
Trigger: GAGTGGCTTCTTGATCCATCACAGAAGGATCTGTGT...GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp TGCTCAAGACCCCTGATAACATCCCCGTTGCATTTGGCAGCTGTCTCTCCATGTATGTTCAATAAGGCCTaGCTTCTGACTGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CSRPLITSPLHLAAVSPCMFNKA*LLTEGP
Trigger: AGGGCCTTCAGTCAGAAGTCAGGCCTTATTGAACAT...ACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCTGTACAGATGCTCAATaGCTCAATGGAGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPACTDAQ*LNGVSE
Trigger: TTCACTGACTCCATTGAGTCATTGAGCATCTGTACA...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp GAAGCTAATTCCCTGTTCTCACTCCTGGTCTCACCACCCAGGGAGAACATGTTTTCCTTAACCAGTGTCTaGAGCTCCTCAGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: EANSLFSLLVSPPRENMFSLTSV*SSSGRM
Trigger: CATCCTACCTGAGGAGCTCCAGACACTGGTTAAGGA...AAACATGTTCTCCCTGGGTGGTGAGACCAGGAGTGAGAACAGGGAATTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CCA 90 bp GGACTCTGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATCTCTCTTGTGACTCTTaGGGCACTGGAGATTTATGT +
Preference number: 4 (lower is better)
Translates to: GLWEVDMALSCDSWGTGDLSCDS*GTGDLC
Trigger: ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAG...ATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGCCAGAACTTCCTTTCTaGGAACGAGTAGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LSCDSWGTGDLCWVASDWPELPF*ERVGLW
Trigger: CCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG...CCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGCATCCCCGTTGCATTTaGCAGCTGTCTCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVHPRCI*QLSLHV
Trigger: CACATGGAGAGACAGCTGCCAAATGCAACGGGGATG...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CAA 72 bp CTCTTTGCCTGCTGCCATCCATGTATAAGACATGATTaGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LFACCHPCIRHD*LLLAFHHDCEA
Trigger: CGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCTTATACATGGATGGCAGCAGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CAA 72 bp CTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LVTLGALEIYVG*PQIGAEYLEAL
Trigger: CAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp TCTTCATGCTCAAGACCCCTGATAACATCCCCGTTGCATTTGGCAGCTGTCTCTAAGAGAAGACTCTTCTaGGGGCCTCTTTCTAAGGGT +
Preference number: 4 (lower is better)
Translates to: SSCSRPLITSPLHLAAVSKRRLF*GPLSKG
Trigger: ACCCTTAGAAAGAGGCCCTCAGAAGAGTCTTCTCTT...AGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACACTCTGGTGCAGATGCTaGATGTACTACCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTLWCRC*MYYLLP
Trigger: TGGGAGGAGGTAGTACATTCAGCATCTGCACCAGAG...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp GCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATCAAAGTCTGGAACCCTaGTGTGAGAAGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALSCDSWGTGDLCWVASDQSLEP*CEKCSC
Trigger: ACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTG...ATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR GCA 90 bp CTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGTCTCGGGCTTCTTCATaGTCAAGACCCCTGATAACA +
Preference number: 4 (lower is better)
Translates to: LSCDSWGTGDLCWVASDWSRASS*SRPLIT
Trigger: TGTTATCAGGGGTCTTGAGCATGAAGAAGCCCGAGA...CCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CCA 90 bp TGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTCCTTAACCAGTGTCTaGAGCTCCTCAGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: WEVDMALSCDSWGTGDLCSLTSV*SSSGRM
Trigger: CATCCTACCTGAGGAGCTCCAGACACTGGTTAAGGA...ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CCAGAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCGTCTCTCCATGTGGCTaGATTCCAGTAGATATTACC +
Preference number: 4 (lower is better)
Translates to: PELPFWERVGLWEVDMALVSPCG*IPVDIT
Trigger: GGTAATATCTACTGGAATCCAGCCACATGGAGAGAC...GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp GCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATGATCCTCCTCTACCTTaGCGATTACAAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ALSCDSWGTGDLCWVASDDPPLP*RLQDPL
Trigger: AAGAGGATCTTGTAATCGTCAAGGTAGAGGAGGATC...ATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp ACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTGATCCTCCTCTACCTTaGCGATTACAAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: TWLSLVTLGALEIYVGLPDPPLP*RLQDPL
Trigger: AAGAGGATCTTGTAATCGTCAAGGTAGAGGAGGATC...AGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTCTGGCCTCAGCCACTaGTGGCAAAGGGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVSGLSH*WQRARS
Trigger: ACTACGGGCCCTTTGCCATCAGTGGCTGAGGCCAGA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGTCTCCGTTCTCTAGCTaGTGTTCCTTAACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LGALEIYVGLPQIGAEYLSPFSS*CSLTSV
Trigger: GACACTGGTTAAGGAACATCAGCTAGAGAACGGAGA...CAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp CTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGACACAGATCCTTCTGTaGTGGATCAAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: LGALEIYVGLPQIGAEYLTQILL*WIKKPL
Trigger: GAGTGGCTTCTTGATCCATCACAGAAGGATCTGTGT...CAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp TCTTCATGCTCAAGACCCCTGATAACATCCCCGTTGCATTTGGCAGCTGTCTCTATGACCAATAAGATGTaGGCTCCGCCTGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSCSRPLITSPLHLAAVSMTNKM*APPEGF
Trigger: AAAACCTTCAGGCGGAGCTCACATCTTATTGGTCAT...AGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTCACAGGGTGAAATTATaGAGCTTTCATCAGAACCTA +
Preference number: 4 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIHRVKL*SFHQNL
Trigger: TAGGTTCTGATGAAAGCTTCATAATTTCACCCTGTG...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCACAGGGTGGGAAAAATaGAGTCATTCGAATACAAAT +
Preference number: 4 (lower is better)
Translates to: RHDLLLLAFHHDCEASPATGWEK*SHSNTN
Trigger: ATTTGTATTCGAATGACTTCATTTTTCCCACCCTGT...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp TTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCATGTGGAACTGAGTCCATTGTAAAAATGGGTGTTTaGGGAGGATCGTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LPSTMIVRRPQPCGTESIVKMGV*GGSSLK
Trigger: TTTCAAAGACGATCCTCCTCAAACACCCATTTTTAC...AATGGACTCAGTTCCACATGGCTGGGGACGCCTCACAATCATGGTGGAAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGGGTACTTTGTGAGTTaGAGAGGCGCCCCGTCGTGG +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVGYFVS*RGAPSW
Trigger: CCACGACGGGGCGCCTCTGCAACTCACAAAGTACCC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330236.7
ENST00000606198.5
CDS-3UTR GCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCACAAAGTCTGGAACCCTaGTGTGAGAAGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPQSLEP*CEKCSC
Trigger: ACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTG...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp GCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCAAAGTCTGGAACCCTaGTGTGAGAAGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALEIYVGLPQIGAEYLEAQSLEP*CEKCSC
Trigger: ACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTG...AGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTCAAAGGGCCCGTAGTTaGATCAGAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LHQILSKTVKLINLHQGTQRARS*IRASRG
Trigger: ACCCCGAGAAGCTCTGATCCAACTACGGGCCCTTTG...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGTTGGAGCTGAGTATTTaGAGGCTCTGGTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLLELSI*RLWCRC
Trigger: GCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAA...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACACCAGAACTTCCTTTCTaGGAACGAGTAGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTPELPF*ERVGLW
Trigger: CCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp TCAATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCCCAGAACTTCCTTTCTaGGAACGAGTAGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SIFSKVWNPAVRSVAVISPELPF*ERVGLW
Trigger: CCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG...GGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp TTTTCTGGCCTGTTATCTCTACACAGATCCTTCTGTGATGGATCAAGAAGCCACCATCCCCGTTGCATTTaGCAGCTGTCTCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: FSGLLSLHRSFCDGSRSHHPRCI*QLSLHV
Trigger: CACATGGAGAGACAGCTGCCAAATGCAACGGGGATG...GTGGCTTCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CCA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATGGGGATCACAGGAGATaGGAAGAAGCACAGGAACTA +
Preference number: 4 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYGDHRR*EEAQEL
Trigger: TAGTTCCTGTGCTTCTTCCCATCTCCTGTGATCCCC...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGGATCCTCCTCTACCTTaGCGATTACAAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVDPPLP*RLQDPL
Trigger: AAGAGGATCTTGTAATCGTCAAGGTAGAGGAGGATC...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGGTAGCGTAACTGCCTaGAGCGCAGGCGGAACACTT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVGSVTA*SAGGTL
Trigger: AAGTGTTCCGCCTGCGCTTCAGGCAGTTACGCTACC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGTCTCCGTTCTCTAGCTaGTGTTCCTTAACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLSPFSS*CSLTSV
Trigger: GACACTGGTTAAGGAACATCAGCTAGAGAACGGAGA...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR TCA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGCATGGCTCTCTCTTGTaGCTCTTGGGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: EQALESNCVGQNQFYHILHGSLL*LLGHWR
Trigger: TCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATG...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp GCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTTTGTTGTGGATATCCTaGTGTGAAAGAAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ALEIYVGLPQIGAEYLEALLWIS*CERRAD
Trigger: GTCAGCCCTTCTTTCACATCAGGATATCCACAACAA...AGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGTGCCTTTTAGTACACTaGAAGACCTCTCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVCLLVH*KTSHQC
Trigger: ACACTGGTGAGAGGTCTTTCAGTGTACTAAAAGGCA...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGATGGCCATACCACCCTaGATGCACCCAATTTTGTTA +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVMAIPP*MHPILL
Trigger: TAACAAAATTGGGTGCATTCAGGGTGGTATGGCCAT...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGCATGGAGAAAATCTCTaGAACCTAACATGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVHGENL*NLTCLS
Trigger: GGAGAGGCATGTTAGGTTTCAGAGATTTTCTCCATG...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp GCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTAGAGGGTTACTTTCATaGAGACTAGATTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ALEIYVGLPQIGAEYLEARGLLS*RLDSWS
Trigger: GGACCAGGAATCTAGTCTGCATGAAAGTAACCCTCT...AGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR GCA 90 bp GAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCTCTAGATTTATGTTGGGTTaGCTCAGATTGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ELPFWERVGLWEVDMALSRFMLG*LRLELS
Trigger: ACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT...AGAGAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTCTTCAACTGTGAGTTaGAGAGGCGCCCCGTCGTGG +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVSSTVS*RGAPSW
Trigger: CCACGACGGGGCGCCTCTGCAACTCACAGTTGAAGA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457389.6
CDS-3UTR CCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGAGGCGGAACACTTCTTaGCCAAGAGGGTTACTTTCA +
Preference number: 4 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLRRNTS*PRGLLS
Trigger: TGAAAGTAACCCTCTTGGCCAAGAAGTGTTCCGCCT...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CTGAAATTTTCTGGCCTGTTATCTCTACACAGATCCTTCTGTGATGGATCAAGACAAAGGGCCCGTAGTTaGATCAGAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LKFSGLLSLHRSFCDGSRQRARS*IRASRG
Trigger: ACCCCGAGAAGCTCTGATCCAACTACGGGCCCTTTG...TCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp TGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTACTGGAGATTTATGTTaGGTTGCCTCAGATTGGAGC +
Preference number: 4 (lower is better)
Translates to: WEVDMALSCDSWGTGDLCTGDLC*VASDWS
Trigger: GCTCCAATCTGAGGCAACCCAACATAAATCTCCAGT...ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCCCTGTTCTCACTCCTaGTCTCACCACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVPCSHS*SHHPGR
Trigger: TCTCCCTGGGTGGTGAGACCAGGAGTGAGAACAGGG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGAGCTGTCTCTCCATGTaGCTGGATTCCAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVSCLSM*LDSSRY
Trigger: ATATCTACTGGAATCCAGCCACATGGAGAGACAGCT...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp GCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTAGCTGTCTCTCCATGTaGCTGGATTCCAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: ALEIYVGLPQIGAEYLEASCLSM*LDSSRY
Trigger: ATATCTACTGGAATCCAGCCACATGGAGAGACAGCT...AGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CCA 90 bp GGACTCTGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATGTTCCTAAACGCTTATaGATTCAGATTTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: GLWEVDMALSCDSWGTGDVPKRL*IQIFHH
Trigger: GTGGTGAAAAATCTGAATCCATAAGCGTTTAGGAAC...ATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CCA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGGAGGAGAAAGGGGAGTaGGTGGAAAGATCAACTAAA +
Preference number: 4 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVEEKGE*VERSTK
Trigger: TTTAGTTGATCTTTCCACCCACTCCCCTTTCTCCTC...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTAAGAGAAGACTCTTCTaGGGGCCTCTTTCTAAGGGT +
Preference number: 4 (lower is better)
Translates to: NHHILALHLAPWRKSLKPKRRLF*GPLSKG
Trigger: ACCCTTAGAAAGAGGCCCTCAGAAGAGTCTTCTCTT...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CGTCGGCTATTATTATTTGGAGACTCAGAACCAAGAGTAAAGTTAACTGCTCTGGCCTCAGATTGGAGCTaGGTATTTGGAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RRLLLFGDSEPRVKLTALASDWS*VFGGSG
Trigger: ACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGC...CAGAGCAGTTAACTTTACTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCATGGCTCTCTCTTGTaGCTCTTGGGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVHGSLL*LLGHWR
Trigger: TCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTACACAGATCCTTCTGTaGTGGATCAAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: NHHILALHLAPWRKSLKPTQILL*WIKKPL
Trigger: GAGTGGCTTCTTGATCCATCACAGAAGGATCTGTGT...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTATGTTCAATAAGGCCTaGCTTCTGACTGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: NHHILALHLAPWRKSLKPMFNKA*LLTEGP
Trigger: AGGGCCTTCAGTCAGAAGTCAGGCCTTATTGAACAT...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGTGCCTTTTAGTACACTaGAAGACCTCTCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLCLLVH*KTSHQC
Trigger: ACACTGGTGAGAGGTCTTTCAGTGTACTAAAAGGCA...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR TCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCAGAGGAGGATCGTCTTTaGAAAATTATCTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPEEDRL*KIIYWV
Trigger: CACCCAGTAGATAATTTTTCAAAGACGATCCTCCTC...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp TTAAAGTCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGGGGTACTTTGTGAGTTaGAGAGGCGCCCCGTCGTGG +
Preference number: 4 (lower is better)
Translates to: LKSYKLMARNRWRITSEVGYFVS*RGAPSW
Trigger: CCACGACGGGGCGCCTCTGCAACTCACAAAGTACCC...CACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGACTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp GGACTCTGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATCCTAGTATATCAATCTaGCTTTCCAAATCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: GLWEVDMALSCDSWGTGDPSISI*LSKSSN
Trigger: ATTAGAGGATTTGGAAAGGCAGATTGATATACTAGG...ATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGCTGCCTCTCTAATCTaGCCAGAAGGTCTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVAASLI*PEGLGL
Trigger: AAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCAGC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR GCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCAACAACCCACATTGGATaGGTAAGTTCTGGCATGTTA +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPTTHIG*VSSGML
Trigger: TAACATGCCAGAACTTACGCATCCAATGTGGGTTGT...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACATCTAGCACTGCACCTTaGTCCATGGAGAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTSSTAP*SMEKIS
Trigger: AGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGA...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATCACAAGTTCTCTCTTTaGCTGCTGCCATCCATGTAT +
Preference number: 4 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYHKFSL*LLPSMY
Trigger: ATACATGGATGGCAGCAGGCAAAGAGAGAACTTGTG...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCAAAGGGCCCGTAGTTaGATCAGAGCTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVQRARS*IRASRG
Trigger: ACCCCGAGAAGCTCTGATCCAACTACGGGCCCTTTG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGCTCTCTTGTGACTCTTaGGGCACTGGAGATTTATGT +
Preference number: 4 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLLSCDS*GTGDLC
Trigger: ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAG...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACAATCTTCTCCAAAGTCTaGAACCCTGCTGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTIFSKV*NPAVRS
Trigger: ACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGAT...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGTCGTCTCTCTTGTGTaGGATTTCCCCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVVVSLV*DFPAAS
Trigger: AGAGGCAGCGGGGAAATCCCACACAAGAGAGACGAC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACAGGCCATCTAAAGAGATaGGTGCAAGGTAATGATAGG +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTGHLKR*VQGNDR
Trigger: CCTATCATTACCTTGCACCCATCTCTTTAGATGGCC...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTTCAGCCATTAGAGCCTaGAAAGCTCAGGAAGTTCGT +
Preference number: 4 (lower is better)
Translates to: LHQILSKTVKLINLHQGTSAIRA*KAQEVR
Trigger: ACGAACTTCCTGAGCTTTTCAGGCTCTAATGGCTGA...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCTCTGGTGCAGATGCTaGATGTACTACCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLWCRC*MYYLLP
Trigger: TGGGAGGAGGTAGTACATTCAGCATCTGCACCAGAG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGCCTCAGATTGGAGCTaGGTATTTGGAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVASDWS*VFGGSG
Trigger: ACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGTCCACTTTCTTTACTaGCACAGGTGCTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVVHFLY*HRCWDW
Trigger: CCAGTCCCAGCACCTGTGTCAGTAAAGAAAGTGGAC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp AATCTTCTCCAAAGTCTGGAACCCTGCTGTGAGAAGTGTAGCTGTCATTTCCTGAGATTTATGTTGGGTTaGCTCAGATTGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: NLLQSLEPCCEKCSCHFLRFMLG*LRLELS
Trigger: ACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT...CAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR GCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACATGGGCACATAGTAAGTaGTCAATAAACGTCGGCTAT +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTWAHSK*SINVGY
Trigger: ATAGCCGACGTTTATTGAGCACTTACTATGTGCCCA...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCAGTATTTGCACTCTACTaGACATTCTTTTCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPVFALY*TFFSPV
Trigger: TACTGGGGAAAAGAATGTGCAGTAGAGTGCAAATAC...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGTTGGAGCTGAGTATTTaGAGGCTCTGGTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: SYKLMARNRWRITSEVLRLELSI*RLWCRC
Trigger: GCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAA...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTACTGGAGATTTATGTTaGGTTGCCTCAGATTGGAGC +
Preference number: 4 (lower is better)
Translates to: NHHILALHLAPWRKSLKPTGDLC*VASDWS
Trigger: GCTCCAATCTGAGGCAACCCAACATAAATCTCCAGT...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CTGAAATTTTCTGGCCTGTTATCTCTACACAGATCCTTCTGTGATGGATCAAGAGAACGAGTAGGACTCTaGGAAGTAGACATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LKFSGLLSLHRSFCDGSRERVGL*EVDMAL
Trigger: GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTC...TCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCATCCCCGTTGCATTTaGCAGCTGTCTCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVHPRCI*QLSLHV
Trigger: CACATGGAGAGACAGCTGCCAAATGCAACGGGGATG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTCTTCAAGGGAATAAATaGGAGAGGGGGATCACAGGA +
Preference number: 4 (lower is better)
Translates to: LHQILSKTVKLINLHQGTLQGNK*ERGITG
Trigger: TCCTGTGATCCCCCTCTCCCATTTATTCCCTTGAAG...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATAGGCTGTTAAGAACCTaGGAAAGCAGTATTGTAATG +
Preference number: 4 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYRLLRT*ESSIVM
Trigger: CATTACAATACTGCTTTCTCAGGTTCTTAACAGCCT...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACACAATTCCAACTCTGGTaGATAAGTGGCTACTCAAAT +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTQFQLW*ISGYSN
Trigger: ATTTGAGTAGCCACTTATTCACCAGAGTTGGAATTG...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATAGGATAGTCACAGGGTaGAATTATGAAGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYRIVTG*NYEAFI
Trigger: GATGAAAGCTTCATAATTTCACCCTGTGACTATCCT...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATCATATATTTTCCCTCTaGCAATGCACCCATCATATG +
Preference number: 4 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYHIFSL*QCTHHM
Trigger: CATATGATGGGTGCATTGTCAGAGGGAAAATATATG...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCAATGGCATTAGAGTTATaGAAGAACCACCTTATCATG +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPMALEL*KNHLIM
Trigger: CATGATAAGGTGGTTCTTTCATAACTCTAATGCCAT...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp GAAGCTAATTCCCTGTTCTCACTCCTGGTCTCACCACCCAGGGAGAACATGTTTCCTAGTATATCAATCTaGCTTTCCAAATCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: EANSLFSLLVSPPRENMFPSISI*LSKSSN
Trigger: ATTAGAGGATTTGGAAAGGCAGATTGATATACTAGG...AAACATGTTCTCCCTGGGTGGTGAGACCAGGAGTGAGAACAGGGAATTAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTCCTTAACCAGTGTCTaGAGCTCCTCAGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVSLTSV*SSSGRM
Trigger: CATCCTACCTGAGGAGCTCCAGACACTGGTTAAGGA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTTGGAGCTGAGTATTTaGAGGCTCTGGTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLELSI*RLWCRC
Trigger: GCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGAACGAGTAGGACTCTaGGAAGTAGACATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVERVGL*EVDMAL
Trigger: GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCCAGAACTTCCTTTCTaGGAACGAGTAGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVPELPF*ERVGLW
Trigger: CCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACAAGAATTACAGTAACCTaGGCCTCAGATCTACATGAA +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTRITVT*ASDLHE
Trigger: TTCATGTAGATCTGAGGCCCAGGTTACTGTAATTCT...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAAGAGAAGACTCTTCTaGGGGCCTCTTTCTAAGGGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVKRRLF*GPLSKG
Trigger: ACCCTTAGAAAGAGGCCCTCAGAAGAGTCTTCTCTT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTCTCCGTTCTCTAGCTaGTGTTCCTTAACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVSPFSS*CSLTSV
Trigger: GACACTGGTTAAGGAACATCAGCTAGAGAACGGAGA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTACACAGATCCTTCTGTaGTGGATCAAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVTQILL*WIKKPL
Trigger: GAGTGGCTTCTTGATCCATCACAGAAGGATCTGTGT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTATGTTCAATAAGGCCTaGCTTCTGACTGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVMFNKA*LLTEGP
Trigger: AGGGCCTTCAGTCAGAAGTCAGGCCTTATTGAACAT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGTGTTGGAAACCAACATaGCAAGTGATGGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SYKLMARNRWRITSEVLRCWKPT*QVMGVF
Trigger: GAAGACACCCATCACTTGTCATGTTGGTTTCCAACA...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGAGAGGGTTACTTTCATaGAGACTAGATTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SYKLMARNRWRITSEVLRRGLLS*RLDSWS
Trigger: GGACCAGGAATCTAGTCTGCATGAAAGTAACCCTCT...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCAAAGTCTGGAACCCTaGTGTGAGAAGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVQSLEP*CEKCSC
Trigger: ACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTCTCGGGCTTCTTCATaGTCAAGACCCCTGATAACA +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVSRASS*SRPLIT
Trigger: TGTTATCAGGGGTCTTGAGCATGAAGAAGCCCGAGA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR GCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTTACATTTCAATGTGTTaGTCTGGTCTATGGCCATAC +
Preference number: 4 (lower is better)
Translates to: NHHILALHLAPWRKSLKPYISMC*SGLWPY
Trigger: GTATGGCCATAGACCAGAGCAACACATTGAAATGTA...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGCTAGGCACTCGGGGGTaGAGAGATACAAATGTAAAA +
Preference number: 4 (lower is better)
Translates to: EQALESNCVGQNQFYHILLGTRG*RDTNVK
Trigger: TTTTACATTTGTATCTCTGCACCCCCGAGTGCCTAG...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAGGCGGAACACTTCTTaGCCAAGAGGGTTACTTTCA +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVRRNTS*PRGLLS
Trigger: TGAAAGTAACCCTCTTGGCCAAGAAGTGTTCCGCCT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGCTCTCTTGTGACTCTTaGGGCACTGGAGATTTATGT +
Preference number: 4 (lower is better)
Translates to: SYKLMARNRWRITSEVLRLSCDS*GTGDLC
Trigger: ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAG...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CTGAAATTTTCTGGCCTGTTATCTCTACACAGATCCTTCTGTGATGGATCAAGAATCTTCTCCAAAGTCTaGAACCCTGCTGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LKFSGLLSLHRSFCDGSRIFSKV*NPAVRS
Trigger: ACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGAT...TCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CCA 90 bp CGTCGGCTATTATTATTTGGAGACTCAGAACCAAGAGTAAAGTTAACTGCTCTGAGTGACAACCCACATTaGATGCGTAAGTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RRLLLFGDSEPRVKLTALSDNPH*MRKFWH
Trigger: ATGCCAGAACTTACGCATCCAATGTGGGTTGTCACT...CAGAGCAGTTAACTTTACTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CGGTTTTATAAAGAGTTCCCCTGCACAAGTTCTCTCTTTGCCTGCTGCCATCCAGTCTTCATTCACCAATaGCTCAATGAAATTGATGTA +
Preference number: 4 (lower is better)
Translates to: RFYKEFPCTSSLFACCHPVFIHQ*LNEIDV
Trigger: TACATCAATTTCATTGAGCCATTGGTGAATGAAGAC...TGGATGGCAGCAGGCAAAGAGAGAACTTGTGCAGGGGAACTCTTTATAAAACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGATCCTCCTCTACCTTaGCGATTACAAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVDPPLP*RLQDPL
Trigger: AAGAGGATCTTGTAATCGTCAAGGTAGAGGAGGATC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTTGTTGTGGATATCCTaGTGTGAAAGAAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLLWIS*CERRAD
Trigger: GTCAGCCCTTCTTTCACATCAGGATATCCACAACAA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTATGACCAATAAGATGTaGGCTCCGCCTGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVMTNKM*APPEGF
Trigger: AAAACCTTCAGGCGGAGCTCACATCTTATTGGTCAT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTCAAAAGCCTCAAAGATaGAATATAGTGCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LHQILSKTVKLINLHQGTQKPQR*NIVPGD
Trigger: ATCACCAGGCACTATATTTCATCTTTGAGGCTTTTG...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAGGGTAAGGCACAACTaGAACACAGAGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVRVRHN*NTEQRS
Trigger: AGATCTTTGCTCTGTGTTTCAGTTGTGCCTTACCCT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAGAGGGTTACTTTCATaGAGACTAGATTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVRGLLS*RLDSWS
Trigger: GGACCAGGAATCTAGTCTGCATGAAAGTAACCCTCT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR GCA 90 bp CTAGTCAGGGAGTTTGCACAGGCTGTTAAGAACCTGAGAAAGCAGTATTGTAATGGATTACAGATGGAGTaGACCAGAGTTCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LVREFAQAVKNLRKQYCNGLQME*TRVQKN
Trigger: ATTCTTTTGAACTCTGGTGCACTCCATCTGTAATCC...ATTACAATACTGCTTTCTCAGGTTCTTAACAGCCTGTGCAAACTCCCTGACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTACTGGAGATTTATGTTaGGTTGCCTCAGATTGGAGC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVTGDLC*VASDWS
Trigger: GCTCCAATCTGAGGCAACCCAACATAAATCTCCAGT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCTCTCTTGTGACTCTTaGGGCACTGGAGATTTATGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLSCDS*GTGDLC
Trigger: ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp TTAAAGTCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGGAACGAGTAGGACTCTaGGAAGTAGACATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LKSYKLMARNRWRITSEVERVGL*EVDMAL
Trigger: GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTC...CACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGACTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTATCTTCTCCAAAGTCTaGAACCCTGCTGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVIFSKV*NPAVRS
Trigger: ACTTCTCACAGCAGGGTTCCAGACTTTGGAGAAGAT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGTCTCTCCATGTGGCTaGATTCCAGTAGATATTACC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVVSPCG*IPVDIT
Trigger: GGTAATATCTACTGGAATCCAGCCACATGGAGAGAC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAGCTGTCTCTCCATGTaGCTGGATTCCAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVSCLSM*LDSSRY
Trigger: ATATCTACTGGAATCCAGCCACATGGAGAGACAGCT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTGTTCCTAAACGCTTATaGATTCAGATTTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: NHHILALHLAPWRKSLKPVPKRL*IQIFHH
Trigger: GTGGTGAAAAATCTGAATCCATAAGCGTTTAGGAAC...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CTCCTTCTCCTACCTGATGCCATAACTAGGATAGTGCCAACTATCTGTACCACACATTCTGAGTTTGTATaGGAATACAAATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LLLLPDAITRIVPTICTTHSEFV*EYKFPL
Trigger: CAGTGGAAATTTGTATTCCCATACAAACTCAGAATG...TGTGGTACAGATAGTTGGCACTATCCTAGTTATGGCATCAGGTAGGAGAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGGACATGGATTACAGATaGAGTGCACCAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SYKLMARNRWRITSEVLRDMDYR*SAPEFK
Trigger: TTTGAACTCTGGTGCACTCCATCTGTAATCCATGTC...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCTGCACCTTGCTCCATaGAGAAAATCTCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLHLAP*RKSLKP
Trigger: AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGCCTATTGATATGGTTTaGCTGTGTCCCATCCAAATC +
Preference number: 4 (lower is better)
Translates to: EQALESNCVGQNQFYHILPIDMV*LCPIQI
Trigger: GATTTGGATGGGACACAGCCAAACCATATCAATAGG...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGACCATCTGCCTGGCCTaGTACATGGATATTTCATTT +
Preference number: 4 (lower is better)
Translates to: SYKLMARNRWRITSEVLRTICLA*YMDISF
Trigger: AAATGAAATATCCATGTACCAGGCCAGGCAGATGGT...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CGTCGGCTATTATTATTTGGAGACTCAGAACCAAGAGTAAAGTTAACTGCTCTGAAAGAAAACGGGGGCTaGGGATATATGGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: RRLLLFGDSEPRVKLTALKENGG*GYMVMN
Trigger: ATTCATCACCATATATCCCCAGCCCCCGTTTTCTTT...CAGAGCAGTTAACTTTACTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCTGACAGCAAGTTTTTaGACATGGAGAATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLTASF*TWRMES
Trigger: GCTCTCCATTCTCCATGTCCAAAAACTTGCTGTCAG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTACAAGATGGGGATCCTaGGAGCAAGGAAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVTRWGS*EQGNWK
Trigger: TTTCCAATTTCCTTGCTCCCAGGATCCCCATCTTGT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp AAAAATGGGTGTTTGAGGAGGATCGTCTTTGAAAAATTATCTACTGGGTGTTACTTGTTGTGGATATCCTaGTGTGAAAGAAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KNGCLRRIVFEKLSTGCYLLWIS*CERRAD
Trigger: GTCAGCCCTTCTTTCACATCAGGATATCCACAACAA...GTAACACCCAGTAGATAATTTTTCAAAGACGATCCTCCTCAAACACCCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR TCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAGTGAAGGTGATACATaGAGAAAAATGCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVSEGDT*RKMLEC
Trigger: GCACTCCAGCATTTTTCTTCATGTATCACCTTCACT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTAGATTTATGTTGGGTTaGCTCAGATTGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVRFMLG*LRLELS
Trigger: ACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR TCA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGATCCAAATCTCATCTTaGATTGTAGCTCCCACAATT +
Preference number: 4 (lower is better)
Translates to: EQALESNCVGQNQFYHILIQISS*IVAPTI
Trigger: AATTGTGGGAGCTACAATTCAAGATGAGATTTGGAT...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp AAAAATGGGTGTTTGAGGAGGATCGTCTTTGAAAAATTATCTACTGGGTGTTACAGATTTATGTTGGGTTaGCTCAGATTGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KNGCLRRIVFEKLSTGCYRFMLG*LRLELS
Trigger: ACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT...GTAACACCCAGTAGATAATTTTTCAAAGACGATCCTCCTCAAACACCCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTCTAAGAACATTTCACTaGAATGCTAAGTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: LHQILSKTVKLINLHQGTLRTFH*NAKYES
Trigger: GCTTTCATACTTAGCATTCCAGTGAAATGTTCTTAG...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGCCTAGTATATCAATCTaGCTTTCCAAATCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: SYKLMARNRWRITSEVLRPSISI*LSKSSN
Trigger: ATTAGAGGATTTGGAAAGGCAGATTGATATACTAGG...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGTTCCTAAACGCTTATaGATTCAGATTTTTCACCAC +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVVPKRL*IQIFHH
Trigger: GTGGTGAAAAATCTGAATCCATAAGCGTTTAGGAAC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CCA 90 bp TTAAAGTCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGATGAGAAGCTTAGGATaGGAGGAGAAAGTACTGATG +
Preference number: 4 (lower is better)
Translates to: LKSYKLMARNRWRITSEVMRSLG*EEKVLM
Trigger: CATCAGTACTTTCTCCTCCCATCCTAAGCTTCTCAT...CACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGACTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
3UTR CAA 72 bp ATAGTGCCTGGTGATACTGAGTTTAAGAGTACATCTTaGTTGGTAGATTATAGACATGGATTACAGATGGAG +
Preference number: 4 (lower is better)
Translates to: IVPGDTEFKSTS*LVDYRHGLQME
Trigger: CTCCATCTGTAATCCATGTCTATAATCTACCAACAAAGATGTACTCTTAAACTCAGTATCACCAGGCACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR GCA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCCTAGTATATCAATCTaGCTTTCCAAATCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVPSISI*LSKSSN
Trigger: ATTAGAGGATTTGGAAAGGCAGATTGATATACTAGG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS CCA 90 bp TGGTTTATAGACTCTTCAACTGTGAGTTGCAGAGGCGCCCCGTCGTaGGGAAGGGAGGCTGCAACGGATAAACAGACTCGAAGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: WFIDSSTVSCRGAPS*GREAATDKQTRRKV
Trigger: GACCTTCCTTCGAGTCTGTTTATCCGTTGCAGCCTCCCTTCCCCACGACGGGGCGCCTCTGCAACTCACAGTTGAAGAGTCTATAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457389.6
CDS-3UTR CAA 90 bp TGGGAAGTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTAGGGTACTTTGTGAGTaGCAGAGGCGCCCCGTCGTG +
Preference number: 5 (lower is better)
Translates to: WEVDMALSCDSWGTGDLCRVLCE*QRRPVV
Trigger: CACGACGGGGCGCCTCTGCAACTCACAAAGTACCCT...ACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS TCA 90 bp TGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCAGATGCTaGATGTACTACCTCCTCCCAGAGTACCCTATGTCCATGTACGCG +
Preference number: 5 (lower is better)
Translates to: CLRLELSIWRLWCRC*MYYLLPEYPMSMYA
Trigger: CGCGTACATGGACATAGGGTACTCTGGGAGGAGGTAGTACATTCAGCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp AGACATGATTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCGTCCCCAGCCGTGAATTCTCAGGTGTaGAATGAGACCAGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: RHDLLLLAFHHDCEASPAVNSQV*NETSVP
Trigger: GGGAACACTGGTCTCATTCAACACCTGAGAATTCAC...GGCTGGGGACGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAATCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp AGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCTTTCAGTTTTTGGAGTaGTGGCACGGGGCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RFMLGCLRLELSIWRLWCFQFLE*WHGARG
Trigger: CCCCCTCGCCCCGTGCCACAACTCCAAAAACTGAAA...GCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536028.2
CDS-3UTR CAA 90 bp CCAGAACTTCCTTTCTGGGAACGAGTAGGACTCTGGGAAGTAGACATGGCTCTCATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: PELPFWERVGLWEVDMALIGAEY*EALVQM
Trigger: CATCTGCACCAGAGCCTCCAAATACTCAGCTCCAAT...GAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp TCTTCATGCTCAAGACCCCTGATAACATCCCCGTTGCATTTGGCAGCTGTCTCTACATCCCCGTTGCATTaGGCAGCTGTCTCTCCATGT +
Preference number: 5 (lower is better)
Translates to: SSCSRPLITSPLHLAAVSTSPLH*AAVSPC
Trigger: ACATGGAGAGACAGCTGCCAAATGCAACGGGGATGT...AGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS TCA 90 bp TCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTaGGTATTTGGAGGCTCTGGTGCAGATGCTGAATGTACTACCTCC +
Preference number: 5 (lower is better)
Translates to: SWGTGDLCWVASDWS*VFGGSGADAECTTS
Trigger: GGAGGTAGTACATTCAGCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp AGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCCAGGCGGAACACTTCTaGGCCAAGAGGGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: RFMLGCLRLELSIWRLWCQAEHF*AKRVTF
Trigger: GAAAGTAACCCTCTTGGCCAAGAAGTGTTCCGCCTG...GCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp ATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCAGATGCCACTGGAGATTTATGTaGGGTTGCCTCAGATTGGAG +
Preference number: 5 (lower is better)
Translates to: MLGCLRLELSIWRLWCRCHWRFM*GCLRLE
Trigger: CTCCAATCTGAGGCAACCCAACATAAATCTCCAGTG...GCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp TCTTCATGCTCAAGACCCCTGATAACATCCCCGTTGCATTTGGCAGCTGTCTCTTTTATGTCGTCTCTCTaGTGTGGGATTTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SSCSRPLITSPLHLAAVSFMSSL*CGISPL
Trigger: CAGCGGGGAAATCCCACACAAGAGAGACGACATAAA...AGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CAA 90 bp GAACAGGCTCTAGAATCAAACTGTGTGGGTCAGAATCAGTTTTATCACATACTGAGGGTACTTTGTGAGTaGCAGAGGCGCCCCGTCGTG +
Preference number: 5 (lower is better)
Translates to: EQALESNCVGQNQFYHILRVLCE*QRRPVV
Trigger: CACGACGGGGCGCCTCTGCAACTCACAAAGTACCCT...CAGTATGTGATAAAACTGATTCTGACCCACACAGTTTGATTCTAGAGCCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGGGGCTGAAGGCTTTCTaGATTCTTCAGCCATTAGAG +
Preference number: 5 (lower is better)
Translates to: LSCDSWGTGDLCWVASDWGLKAF*ILQPLE
Trigger: CTCTAATGGCTGAAGAATCAAGAAAGCCTTCAGCCC...CCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp AGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: RFMLGCLRLELSIWRLWCIGAEY*EALVQM
Trigger: CATCTGCACCAGAGCCTCCAAATACTCAGCTCCAAT...GCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp CTTGGGGCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGTTGGGTTGCCTCAGATaGGAGCTGAGTATTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LGALEIYVGLPQIGAEYLLGCLR*ELSIWR
Trigger: CCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAA...CAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp GTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTTTGGGTTGCCTCAGATaGGAGCTGAGTATTTGGAGG +
Preference number: 5 (lower is better)
Translates to: VDMALSCDSWGTGDLCWVLGCLR*ELSIWR
Trigger: CCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAA...AACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp ACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTGCCTGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TWLSLVTLGALEIYVGLPEIYVG*PQIGAE
Trigger: CTCAGCTCCAATCTGAGGCAACCCAACATAAATCTC...AGGCAACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS TCA 90 bp CCAAGAGGGTTACTTTCATGCAGACTAGATTCCTGGTCCCAACCATaGTCCTCCTCTACCTTGACGATTACAAGATCCTCTTCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: PRGLLSCRLDSWSQP*SSSTLTITRSSSGV
Trigger: GACTCCTGAAGAGGATCTTGTAATCGTCAAGGTAGAGGAGGATCATGGTTGGGACCAGGAATCTAGTCTGCATGAAAGTAACCCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp AGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RFMLGCLRLELSIWRLWCEIYVG*PQIGAE
Trigger: CTCAGCTCCAATCTGAGGCAACCCAACATAAATCTC...GCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp GTAGACATGGCTCTCTCTTGTGACTCTTGGGGCACTGGAGATTTATGTTGGGTTCACTGGAGATTTATGTaGGGTTGCCTCAGATTGGAG +
Preference number: 5 (lower is better)
Translates to: VDMALSCDSWGTGDLCWVHWRFM*GCLRLE
Trigger: CTCCAATCTGAGGCAACCCAACATAAATCTCCAGTG...AACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536028.2
ENST00000606198.5
CDS-3UTR CAA 90 bp AGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTTGGAGGCTCTGGTGCGTGAATTCTCAGGTGTaGAATGAGACCAGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: RFMLGCLRLELSIWRLWCVNSQV*NETSVP
Trigger: GGGAACACTGGTCTCATTCAACACCTGAGAATTCAC...GCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CAA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATGCACAAGTTCTCTCTTaGCCTGCTGCCATCCATGTA +
Preference number: 5 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYAQVLS*PAAIHV
Trigger: TACATGGATGGCAGCAGGCAAAGAGAGAACTTGTGC...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCTCTTCAACTGTGAGTaGCAGAGGCGCCCCGTCGTG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLFNCE*QRRPVV
Trigger: CACGACGGGGCGCCTCTGCAACTCACAGTTGAAGAG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457389.6
CDS-3UTR CAA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTCAGGCGGAACACTTCTaGGCCAAGAGGGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: LHQILSKTVKLINLHQGTQAEHF*AKRVTF
Trigger: GAAAGTAACCCTCTTGGCCAAGAAGTGTTCCGCCTG...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYEIYVG*PQIGAE
Trigger: CTCAGCTCCAATCTGAGGCAACCCAACATAAATCTC...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTTTCAGTTTTTGGAGTaGTGGCACGGGGCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVFQFLE*WHGARG
Trigger: CCCCCTCGCCCCGTGCCACAACTCCAAAAACTGAAA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000457389.6
CDS-3UTR CAA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: LHQILSKTVKLINLHQGTIGAEY*EALVQM
Trigger: CATCTGCACCAGAGCCTCCAAATACTCAGCTCCAAT...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTTTGGGTTGCCTCAGATaGGAGCTGAGTATTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LHQILSKTVKLINLHQGTLGCLR*ELSIWR
Trigger: CCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAA...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGACATCCCCGTTGCATTaGGCAGCTGTCTCTCCATGT +
Preference number: 5 (lower is better)
Translates to: SYKLMARNRWRITSEVLRTSPLH*AAVSPC
Trigger: ACATGGAGAGACAGCTGCCAAATGCAACGGGGATGT...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCAGGCGGAACACTTCTaGGCCAAGAGGGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVQAEHF*AKRVTF
Trigger: GAAAGTAACCCTCTTGGCCAAGAAGTGTTCCGCCTG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTACATCCCCGTTGCATTaGGCAGCTGTCTCTCCATGT +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVTSPLH*AAVSPC
Trigger: ACATGGAGAGACAGCTGCCAAATGCAACGGGGATGT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CTGAAATTTTCTGGCCTGTTATCTCTACACAGATCCTTCTGTGATGGATCAAGACTGATAACATCCCCGTaGCATTTGGCAGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LKFSGLLSLHRSFCDGSRLITSP*HLAAVS
Trigger: AGAGACAGCTGCCAAATGCAACGGGGATGTTATCAG...TCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606198.5
CDS-3UTR CAA 90 bp GCACTCTACTGCACATTCTTTTCCCCAGTACCTCTCATGACAAGCGCTACATATGTCGGCTATTATTATTaGGAGACTCAGAACCAAGAG +
Preference number: 5 (lower is better)
Translates to: ALYCTFFSPVPLMTSATYVGYYY*ETQNQE
Trigger: CTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGAC...ATATGTAGCGCTTGTCATGAGAGGTACTGGGGAAAAGAATGTGCAGTAGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp ACTGGGGGTGGTGAAGGATATGTACAGATGCTCAATGACTCAATGGAGTCAGTGTGTAAAAATGGGTGTTaGAGGAGGATCGTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: TGGGEGYVQMLNDSMESVCKNGC*RRIVFE
Trigger: TTCAAAGACGATCCTCCTCAAACACCCATTTTTACA...CACTGACTCCATTGAGTCATTGAGCATCTGTACATATCCTTCACCACCCCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTGAGGTAATGGAGAATTaGGAACACCACTGCTCCATA +
Preference number: 5 (lower is better)
Translates to: NHHILALHLAPWRKSLKPEVMEN*EHHCSI
Trigger: TATGGAGCAGTGGTGTTCCAAATTCTCCATTACCTC...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGGGGCTGAAGGCTTTCTaGATTCTTCAGCCATTAGAG +
Preference number: 5 (lower is better)
Translates to: SYKLMARNRWRITSEVLRGLKAF*ILQPLE
Trigger: CTCTAATGGCTGAAGAATCAAGAAAGCCTTCAGCCC...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVIGAEY*EALVQM
Trigger: CATCTGCACCAGAGCCTCCAAATACTCAGCTCCAAT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTTGGGTTGCCTCAGATaGGAGCTGAGTATTTGGAGG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLGCLR*ELSIWR
Trigger: CCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp TCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGAGGCACTGGAGATTTATGTaGGGTTGCCTCAGATTGGAG +
Preference number: 5 (lower is better)
Translates to: SYKLMARNRWRITSEVLRHWRFM*GCLRLE
Trigger: CTCCAATCTGAGGCAACCCAACATAAATCTCCAGTG...CCTCAGCACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCTGATAACATCCCCGTaGCATTTGGCAGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVLITSP*HLAAVS
Trigger: AGAGACAGCTGCCAAATGCAACGGGGATGTTATCAG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTTTTATGTCGTCTCTCTaGTGTGGGATTTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVFMSSL*CGISPL
Trigger: CAGCGGGGAAATCCCACACAAGAGAGACGACATAAA...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGGGCTGAAGGCTTTCTaGATTCTTCAGCCATTAGAG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVGLKAF*ILQPLE
Trigger: CTCTAATGGCTGAAGAATCAAGAAAGCCTTCAGCCC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGAGATTTATGTTGGGTaGCCTCAGATTGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVEIYVG*PQIGAE
Trigger: CTCAGCTCCAATCTGAGGCAACCCAACATAAATCTC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTCACTGGAGATTTATGTaGGGTTGCCTCAGATTGGAG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVHWRFM*GCLRLE
Trigger: CTCCAATCTGAGGCAACCCAACATAAATCTCCAGTG...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGTGAATTCTCAGGTGTaGAATGAGACCAGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVVNSQV*NETSVP
Trigger: GGGAACACTGGTCTCATTCAACACCTGAGAATTCAC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000606198.5
CDS-3UTR CAA 90 bp TTAAAGTCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCTGATAACATCCCCGTaGCATTTGGCAGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LKSYKLMARNRWRITSEVLITSP*HLAAVS
Trigger: AGAGACAGCTGCCAAATGCAACGGGGATGTTATCAG...CACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGACTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTATACATTTCAATGTGTaGCTCTGGTCTATGGCCATA +
Preference number: 5 (lower is better)
Translates to: LHQILSKTVKLINLHQGTIHFNV*LWSMAI
Trigger: TATGGCCATAGACCAGAGCAACACATTGAAATGTAT...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp AAAAATGGGTGTTTGAGGAGGATCGTCTTTGAAAAATTATCTACTGGGTGTTACATGATTTGCTCCTCCTaGCCTTCCACCATGATTGTG +
Preference number: 5 (lower is better)
Translates to: KNGCLRRIVFEKLSTGCYMICSS*PSTMIV
Trigger: CACAATCATGGTGGAAGGCAAGGAGGAGCAAATCAT...GTAACACCCAGTAGATAATTTTTCAAAGACGATCCTCCTCAAACACCCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CTAGTCAGGGAGTTTGCACAGGCTGTTAAGAACCTGAGAAAGCAGTATTGTAATCATCCAAATCTCATCTaGAATTGTAGCTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: LVREFAQAVKNLRKQYCNHPNLI*NCSSHN
Trigger: ATTGTGGGAGCTACAATTCAAGATGAGATTTGGATG...ATTACAATACTGCTTTCTCAGGTTCTTAACAGCCTGTGCAAACTCCCTGACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTACTGACAGCAAGTTTTaGGACATGGAGAATGGAGAG +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVTDSKF*DMENGE
Trigger: CTCTCCATTCTCCATGTCCAAAAACTTGCTGTCAGT...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp AACCACCATATTCTAGCACTGCACCTTGCTCCATGGAGAAAATCTCTGAAACCTGGAAGTTTGAATCTGTaGAATCAAGGTGAATATGCT +
Preference number: 5 (lower is better)
Translates to: NHHILALHLAPWRKSLKPGSLNL*NQGEYA
Trigger: AGCATATTCACCTTGATTCAACAGATTCAAACTTCC...AGGTTTCAGAGATTTTCTCCATGGAGCAAGGTGCAGTGCTAGAATATGGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CTCCATCAGATACTTTCAAAGACAGTCAAGCTAATCAACCTTCACCAAGGCACTAAGGCTGTAGGAAGTTaGAATCTGTTGAATCAAGGT +
Preference number: 5 (lower is better)
Translates to: LHQILSKTVKLINLHQGTKAVGS*NLLNQG
Trigger: ACCTTGATTCAACAGATTCAAACTTCCTACAGCCTT...AGTGCCTTGGTGAAGGTTGATTAGCTTGACTGTCTTTGAAAGTATCTGATGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CGTCGGCTATTATTATTTGGAGACTCAGAACCAAGAGTAAAGTTAACTGCTCTGAAAAGGCCTTATTATTaGTCCACTGGTGAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: RRLLLFGDSEPRVKLTALKRPYY*STGESK
Trigger: CTTAGACTCACCAGTGGACAAATAATAAGGCCTTTT...CAGAGCAGTTAACTTTACTCTTGGTTCTGAGTCTCCAAATAATAATAGCCGACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp CAGTGTGTGGTTTCCCTAATGCTGAATAATGCTCAAACTCTAACTGATGTTGTTGCTAAGAGTGTGAACTaGAGACAAAGAATGATTTCT +
Preference number: 5 (lower is better)
Translates to: QCVVSLMLNNAQTLTDVVAKSVN*RQRMIS
Trigger: AGAAATCATTCTTTGTCTCAAGTTCACACTCTTAGC...AACAACATCAGTTAGAGTTTGAGCATTATTCAGCATTAGGGAAACCACACACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS-3UTR CAA 90 bp TTAAAGTCATATAAACTAATGGCAAGAAACAGATGGAGAATAACGAGTGAGGTGCACAGCCTTTTTCTATaGTCTTATACCATTTGGCTA +
Preference number: 5 (lower is better)
Translates to: LKSYKLMARNRWRITSEVHSLFL*SYTIWL
Trigger: TAGCCAAATGGTATAAGACAATAGAAAAAGGCTGTG...CACCTCACTCGTTATTCTCCATCTGTTTCTTGCCATTAGTTTATATGACTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330236.7
CDS CAA 90 bp GCACTGGAGATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATGCTGAATGTACTACCTCCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: ALEIYVGLPQIGAEY*EALVQMLNVLPPPR
Trigger: TCTGGGAGGAGGTAGTACATTCAGCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000536028.2
ENST00000606198.5
CDS CAA 72 bp ATTTATGTTGGGTTGCCTCAGATTGGAGCTGAGTATTaGGAGGCTCTGGTGCAGATGCTGAATGTACTACCT +
Preference number: 6 (lower is better)
Translates to: IYVGLPQIGAEY*EALVQMLNVLP
Trigger: AGGTAGTACATTCAGCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330236.7
ENST00000457389.6
ENST00000536028.2
ENST00000606198.5